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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0147.Seq
         (710 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    24   1.6  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    23   3.8  
EF127805-1|ABL67942.1|  461|Apis mellifera nicotinic acetylcholi...    22   6.6  
EF127804-1|ABL67941.1|  461|Apis mellifera nicotinic acetylcholi...    22   6.6  
EF127803-1|ABL67940.1|  461|Apis mellifera nicotinic acetylcholi...    22   6.6  
EF127802-1|ABL67939.1|  461|Apis mellifera nicotinic acetylcholi...    22   6.6  
EF127801-1|ABL67938.1|  461|Apis mellifera nicotinic acetylcholi...    22   6.6  
EF127800-1|ABL67937.1|  461|Apis mellifera nicotinic acetylcholi...    22   6.6  
DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholi...    22   6.6  
DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholi...    22   6.6  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   8.7  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   8.7  

>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 19/73 (26%), Positives = 31/73 (42%), Gaps = 10/73 (13%)
 Frame = -2

Query: 622 VTSSFAIGVALQH-----AALEIKTSWRFFQAGR-----CAVXWRAGRRWRCYRLVLPAK 473
           VT+ F + +A+       A L    +W  F+        C++ W A   W C   +L   
Sbjct: 99  VTNMFIVSLAVADLMVGLAVLPFSATWEVFKVWIFGDLWCSI-WLAVDVWMCTASILNLC 157

Query: 472 AVPVDRRSASLKP 434
           A+ +DR  A  +P
Sbjct: 158 AISLDRYLAVTRP 170


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = +1

Query: 661 LASATALSCWNAIR 702
           L S TAL CWN  R
Sbjct: 318 LVSDTALGCWNENR 331


>EF127805-1|ABL67942.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 6 protein.
          Length = 461

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 6/12 (50%), Positives = 12/12 (100%)
 Frame = -1

Query: 281 ELITTSAWLRLQ 246
           +++TT+AWL+L+
Sbjct: 31  QILTTNAWLKLE 42


>EF127804-1|ABL67941.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 5 protein.
          Length = 461

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 6/12 (50%), Positives = 12/12 (100%)
 Frame = -1

Query: 281 ELITTSAWLRLQ 246
           +++TT+AWL+L+
Sbjct: 31  QILTTNAWLKLE 42


>EF127803-1|ABL67940.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 4 protein.
          Length = 461

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 6/12 (50%), Positives = 12/12 (100%)
 Frame = -1

Query: 281 ELITTSAWLRLQ 246
           +++TT+AWL+L+
Sbjct: 31  QILTTNAWLKLE 42


>EF127802-1|ABL67939.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 3 protein.
          Length = 461

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 6/12 (50%), Positives = 12/12 (100%)
 Frame = -1

Query: 281 ELITTSAWLRLQ 246
           +++TT+AWL+L+
Sbjct: 31  QILTTNAWLKLE 42


>EF127801-1|ABL67938.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 2 protein.
          Length = 461

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 6/12 (50%), Positives = 12/12 (100%)
 Frame = -1

Query: 281 ELITTSAWLRLQ 246
           +++TT+AWL+L+
Sbjct: 31  QILTTNAWLKLE 42


>EF127800-1|ABL67937.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 1 protein.
          Length = 461

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 6/12 (50%), Positives = 12/12 (100%)
 Frame = -1

Query: 281 ELITTSAWLRLQ 246
           +++TT+AWL+L+
Sbjct: 31  QILTTNAWLKLE 42


>DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 6/12 (50%), Positives = 12/12 (100%)
 Frame = -1

Query: 281 ELITTSAWLRLQ 246
           +++TT+AWL+L+
Sbjct: 99  QILTTNAWLKLE 110


>DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 6/12 (50%), Positives = 12/12 (100%)
 Frame = -1

Query: 281 ELITTSAWLRLQ 246
           +++TT+AWL+L+
Sbjct: 99  QILTTNAWLKLE 110


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -1

Query: 56  SPELRQSPDSCSPGDPL 6
           +PE+ Q+ ++C P  PL
Sbjct: 103 TPEVHQAINTCQPSIPL 119


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 11/37 (29%), Positives = 16/37 (43%)
 Frame = +1

Query: 130 PNLRYQPSRRTPDVRTVGMRGN*LRDYPRRSPCPARR 240
           P +  +  +RT  +    MRG      P  SP PA +
Sbjct: 714 PRMTAEQLKRTDIIHNYIMRGEASPRSPNASPSPAEQ 750


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,920
Number of Sequences: 438
Number of extensions: 3868
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21926700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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