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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00056
         (492 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    23   1.3  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     23   2.3  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          22   3.1  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          22   3.1  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          22   3.1  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          22   3.1  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          22   3.1  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          22   3.1  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          22   3.1  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    22   3.1  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   3.1  
AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    21   5.4  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    21   9.4  
AB086196-1|BAD06465.1|  289|Apis mellifera Period protein.             21   9.4  

>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +1

Query: 259 TDEAEVCICSRWQGPRHQYCQSWILQVARQRQTPQT 366
           +DEAE    S+  G    + QS I +VAR+ +T  T
Sbjct: 272 SDEAEPSSTSKKSGIVRSHQQSCINRVARETKTAGT 307


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = +1

Query: 304 RHQYCQSWILQVARQRQTPQTTCHSKS 384
           RH   ++W+    R + TPQ+   S++
Sbjct: 241 RHLERKAWVASFGRPKMTPQSLLPSQT 267


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 9/32 (28%), Positives = 20/32 (62%)
 Frame = +1

Query: 259 TDEAEVCICSRWQGPRHQYCQSWILQVARQRQ 354
           ++++E  + SR Q  R +  + W++Q  R+R+
Sbjct: 20  SEDSETGLRSRTQEERLRRRREWMIQQERERE 51


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 9/32 (28%), Positives = 20/32 (62%)
 Frame = +1

Query: 259 TDEAEVCICSRWQGPRHQYCQSWILQVARQRQ 354
           ++++E  + SR Q  R +  + W++Q  R+R+
Sbjct: 20  SEDSETGLRSRTQEERLRRRREWMIQQERERE 51


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 9/32 (28%), Positives = 20/32 (62%)
 Frame = +1

Query: 259 TDEAEVCICSRWQGPRHQYCQSWILQVARQRQ 354
           ++++E  + SR Q  R +  + W++Q  R+R+
Sbjct: 20  SEDSETGLRSRTQEERLRRRREWMIQQERERE 51


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 9/32 (28%), Positives = 20/32 (62%)
 Frame = +1

Query: 259 TDEAEVCICSRWQGPRHQYCQSWILQVARQRQ 354
           ++++E  + SR Q  R +  + W++Q  R+R+
Sbjct: 20  SEDSETGLRSRTQEERLRRRREWMIQQERERE 51


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 9/32 (28%), Positives = 20/32 (62%)
 Frame = +1

Query: 259 TDEAEVCICSRWQGPRHQYCQSWILQVARQRQ 354
           ++++E  + SR Q  R +  + W++Q  R+R+
Sbjct: 20  SEDSETGLRSRTQEERLRRRREWMIQQERERE 51


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 9/32 (28%), Positives = 20/32 (62%)
 Frame = +1

Query: 259 TDEAEVCICSRWQGPRHQYCQSWILQVARQRQ 354
           ++++E  + SR Q  R +  + W++Q  R+R+
Sbjct: 20  SEDSETGLRSRTQEERLRRRREWMIQQERERE 51


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 9/32 (28%), Positives = 20/32 (62%)
 Frame = +1

Query: 259 TDEAEVCICSRWQGPRHQYCQSWILQVARQRQ 354
           ++++E  + SR Q  R +  + W++Q  R+R+
Sbjct: 20  SEDSETGLRSRTQEERLRRRREWMIQQERERE 51


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 9/32 (28%), Positives = 20/32 (62%)
 Frame = +1

Query: 259 TDEAEVCICSRWQGPRHQYCQSWILQVARQRQ 354
           ++++E  + SR Q  R +  + W++Q  R+R+
Sbjct: 20  SEDSETGLRSRTQEERLRRRREWMIQQERERE 51


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 14/48 (29%), Positives = 20/48 (41%)
 Frame = -1

Query: 270 SLVCSGLMSKAYLSSKLDRNSCSV*SGNFSYQVCQSIQDGTCPC*FCD 127
           S+V S     +YL  KL+RN   +    +        Q  +C C  CD
Sbjct: 287 SVVVSDYSDYSYLDEKLERNDLDL--EKYEGISSTPSQASSCSCLDCD 332


>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 8/28 (28%), Positives = 13/28 (46%)
 Frame = -3

Query: 289 WSRCILQPRLFRTNVQSLSKFKTGQKFL 206
           W +CIL    +   V  ++ +K   K L
Sbjct: 111 WDKCILSSESYNPQVDFVADYKIEGKVL 138


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -1

Query: 285 ADAYFSLVCSGLMSKAYLSSKLDRNS 208
           +D+ +S  CS   S+    S + RNS
Sbjct: 13  SDSGYSNTCSNSQSQRSSGSSISRNS 38


>AB086196-1|BAD06465.1|  289|Apis mellifera Period protein.
          Length = 289

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -1

Query: 285 ADAYFSLVCSGLMSKAYLSSKLDRNS 208
           +D+ +S  CS   S+    S + RNS
Sbjct: 13  SDSGYSNTCSNSQSQRSSGSSISRNS 38


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,749
Number of Sequences: 438
Number of extensions: 2713
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13544190
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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