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Last updated: 2019/10/06
 
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0090
         (604 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    22   4.0  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   5.3  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          21   9.3  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          21   9.3  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          21   9.3  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          21   9.3  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          21   9.3  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          21   9.3  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          21   9.3  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    21   9.3  

>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +3

Query: 276 RTTGRSAECMNQMSETAVPLVLSS 347
           +  G+  +C N MSE  V ++L +
Sbjct: 170 KENGKEFDCHNYMSELTVDILLET 193


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = -3

Query: 323 SFGHLVHALGRAAGGAKLPSAGLA*TPLRPKP 228
           S   LV A+   AGG   PSAG    P+ P P
Sbjct: 393 SMSALVSAVRSPAGGQLPPSAG---APMPPIP 421


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 7/26 (26%), Positives = 17/26 (65%)
 Frame = +2

Query: 461 LLRNDRKSRHRRIKKQVAMNAWLPQA 538
           +++ +R+  H R+KK++ +   L +A
Sbjct: 43  MIQQEREREHERLKKKMILEYELRRA 68


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 7/26 (26%), Positives = 17/26 (65%)
 Frame = +2

Query: 461 LLRNDRKSRHRRIKKQVAMNAWLPQA 538
           +++ +R+  H R+KK++ +   L +A
Sbjct: 43  MIQQEREREHERLKKKMILEYELRRA 68


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 7/26 (26%), Positives = 17/26 (65%)
 Frame = +2

Query: 461 LLRNDRKSRHRRIKKQVAMNAWLPQA 538
           +++ +R+  H R+KK++ +   L +A
Sbjct: 43  MIQQEREREHERLKKKMILEYELRRA 68


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 7/26 (26%), Positives = 17/26 (65%)
 Frame = +2

Query: 461 LLRNDRKSRHRRIKKQVAMNAWLPQA 538
           +++ +R+  H R+KK++ +   L +A
Sbjct: 43  MIQQEREREHERLKKKMILEYELRRA 68


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 7/26 (26%), Positives = 17/26 (65%)
 Frame = +2

Query: 461 LLRNDRKSRHRRIKKQVAMNAWLPQA 538
           +++ +R+  H R+KK++ +   L +A
Sbjct: 43  MIQQEREREHERLKKKMILEYELRRA 68


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 7/26 (26%), Positives = 17/26 (65%)
 Frame = +2

Query: 461 LLRNDRKSRHRRIKKQVAMNAWLPQA 538
           +++ +R+  H R+KK++ +   L +A
Sbjct: 43  MIQQEREREHERLKKKMILEYELRRA 68


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 7/26 (26%), Positives = 17/26 (65%)
 Frame = +2

Query: 461 LLRNDRKSRHRRIKKQVAMNAWLPQA 538
           +++ +R+  H R+KK++ +   L +A
Sbjct: 43  MIQQEREREHERLKKKMILEYELRRA 68


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 7/26 (26%), Positives = 17/26 (65%)
 Frame = +2

Query: 461 LLRNDRKSRHRRIKKQVAMNAWLPQA 538
           +++ +R+  H R+KK++ +   L +A
Sbjct: 43  MIQQEREREHERLKKKMILEYELRRA 68


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,932
Number of Sequences: 438
Number of extensions: 3132
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17726685
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

The construction of this database has been supported by
Grant-in-Aid for Publication of Scientific Research Results,
JSPS, Japan (1999-2003, 2005-2018).

The EST sequencing was supported by the Genome Analysis Program,National Bioresource Project (NBRP),
Grants-in-Aid for Scientific Research, MEXT,and the Agrigenome Program, NIAS/MAFF.
The maintenance and distribution of the DNA clones are supported by the National Bioresource Project (NBRP).