Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30061
         (739 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    25   0.98 
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    23   3.0  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   9.1  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   9.1  

>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 24.6 bits (51), Expect = 0.98
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = -1

Query: 562 VDWYGDVLLNGYWVRSGDGYGVGAVHGVRYANSD 461
           VDW  D +     V  GDGYG G V+ +  A  D
Sbjct: 469 VDWMLDRIRTSINVL-GDGYGAGIVYHLSKAELD 501


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -1

Query: 691 HWSGYWYGNRPGYRHWVRSG 632
           H   Y  G+R  Y  WV+ G
Sbjct: 157 HGMAYHRGHRKDYERWVQQG 176


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -1

Query: 538 LNGYWVRSGDGYGVGAVHGVRYA 470
           + GY+  SG+G    A  G+ YA
Sbjct: 32  IKGYYKISGNGKQYEAYEGIPYA 54


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -1

Query: 538 LNGYWVRSGDGYGVGAVHGVRYA 470
           + GY+  SG+G    A  G+ YA
Sbjct: 32  IKGYYKISGNGKQYEAYEGIPYA 54


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,473
Number of Sequences: 438
Number of extensions: 2779
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23023035
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)