Silkworm BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= cesb0062
         (901 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    24   2.2  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    24   2.2  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    23   3.8  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 12/42 (28%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
 Frame = -3

Query: 278 CWSGQPTRRLKTTETISIKFVYLQFTRRSP--EDRSAKEIQE 159
           CWSG+P++R      + +     Q  +RS   ++ S+ ++QE
Sbjct: 838 CWSGEPSKRPLLGAIVPVLESIQQKAKRSKSLQEVSSDKLQE 879


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
            isoform A protein.
          Length = 969

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 12/42 (28%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
 Frame = -3

Query: 278  CWSGQPTRRLKTTETISIKFVYLQFTRRSP--EDRSAKEIQE 159
            CWSG+P++R      + +     Q  +RS   ++ S+ ++QE
Sbjct: 876  CWSGEPSKRPLLGAIVPVLESIQQKAKRSKSLQEVSSDKLQE 917


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
 Frame = -1

Query: 553 DENLMDAILLGAKR--IGHAYALAKHPLLLEEVIKNDIGLEINIISNAVLSLVRDVRN 386
           +EN     L   KR    H  A      L ++ +  +  LE+++I   VLS+ R++ N
Sbjct: 447 NENYKSLNLAAQKREYYSHYVAFKSLSYLKKQPVIANGSLEVDVIDGRVLSVKRELGN 504


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 236,720
Number of Sequences: 438
Number of extensions: 5487
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29146299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)