Silkworm BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= cesb0037
         (740 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        23   3.0  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        23   3.0  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        23   3.0  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   9.2  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   9.2  

>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +1

Query: 259 PCTWAERP 282
           PCTWA RP
Sbjct: 300 PCTWAARP 307


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +1

Query: 259 PCTWAERP 282
           PCTWA RP
Sbjct: 300 PCTWAARP 307


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +1

Query: 259 PCTWAERP 282
           PCTWA RP
Sbjct: 300 PCTWAARP 307


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = +1

Query: 4   CPTLQTETHCCFTAE 48
           C T  ++T CCF  +
Sbjct: 437 CKTCNSKTKCCFAQD 451


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = +1

Query: 256  GPCTWAERPRLPPPVPDRHILQLH 327
            GPC  A     P   PD H  +LH
Sbjct: 1464 GPCWHAVMTTYPRINPDNHNEKLH 1487


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,402
Number of Sequences: 438
Number of extensions: 4199
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23144850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)