Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0122
         (321 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      20   6.4  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    20   6.4  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    20   8.4  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    20   8.4  

>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 20.2 bits (40), Expect = 6.4
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +3

Query: 210 YHLSISLIFYLPDIG 254
           Y+L   LI+++ DIG
Sbjct: 214 YNLENKLIYFIEDIG 228


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 20.2 bits (40), Expect = 6.4
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 55   NTNILFLVNMNYLLTF 102
            N +  F+VN N  LTF
Sbjct: 957  NPDFAFIVNSNLRLTF 972


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 19.8 bits (39), Expect = 8.4
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +3

Query: 156 YTVKIFTNFSPVLINLI 206
           YT+KI+T+  P   N++
Sbjct: 251 YTLKIYTHDIPETYNVV 267


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 19.8 bits (39), Expect = 8.4
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +3

Query: 156 YTVKIFTNFSPVLINLI 206
           YT+KI+T+  P   N++
Sbjct: 251 YTLKIYTHDIPETYNVV 267


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,255
Number of Sequences: 438
Number of extensions: 1380
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  6968808
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)