Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0104
         (646 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               24   1.4  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    22   4.4  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    22   4.4  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    22   4.4  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    22   4.4  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    22   4.4  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    21   7.7  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    21   7.7  

>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = +2

Query: 545 RIQNARRDVEAHLDRGRSMLSVFFLTRASRLPK 643
           ++Q     VEAHL +GR  +  +   +  ++P+
Sbjct: 180 QLQGISTPVEAHLRKGRGAIGAYGPEKGPKVPE 212


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +1

Query: 382 ALGRAAGGAKLPSAGLCLNASKAEASL 462
           ALGR AGG    S+ L L+ +   +SL
Sbjct: 5   ALGRCAGGGGRLSSVLSLSLTSLASSL 31


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +1

Query: 382 ALGRAAGGAKLPSAGLCLNASKAEASL 462
           ALGR AGG    S+ L L+ +   +SL
Sbjct: 5   ALGRCAGGGGRLSSVLSLSLTSLASSL 31


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +1

Query: 382 ALGRAAGGAKLPSAGLCLNASKAEASL 462
           ALGR AGG    S+ L L+ +   +SL
Sbjct: 5   ALGRCAGGGGRLSSVLSLSLTSLASSL 31


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +1

Query: 382 ALGRAAGGAKLPSAGLCLNASKAEASL 462
           ALGR AGG    S+ L L+ +   +SL
Sbjct: 5   ALGRCAGGGGRLSSVLSLSLTSLASSL 31


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -2

Query: 408 RTTGRSAECMNQMSETAVPLVLSS 337
           +  G+  +C N MSE  V ++L +
Sbjct: 170 KENGKEFDCHNYMSELTVDILLET 193


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -2

Query: 306 GKTNLSHDGLNPAHVPF*WVNNPTLG 229
           GK N      +PA  PF W ++ + G
Sbjct: 404 GKENYQTMSRDPARTPFQWDDSVSAG 429


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -2

Query: 306 GKTNLSHDGLNPAHVPF*WVNNPTLG 229
           GK N      +PA  PF W ++ + G
Sbjct: 404 GKENYQTMSRDPARTPFQWDDSVSAG 429


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,664
Number of Sequences: 438
Number of extensions: 3601
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19438227
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)