Silkworm BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0084
         (508 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    24   0.79 
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   1.4  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    22   3.2  
DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.              21   7.3  
DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.              21   7.3  
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    21   7.3  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            21   7.3  
DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.              21   9.7  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    21   9.7  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   9.7  

>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 24.2 bits (50), Expect = 0.79
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -2

Query: 357 GHVDPGETDWMTALRET 307
           GHVD G+T  + ALR T
Sbjct: 152 GHVDHGKTTLLDALRNT 168


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -1

Query: 244 NYEVNGEPKTVVYWLAKLKNPE 179
           N +VN   K+ +  L KLK+PE
Sbjct: 729 NRQVNSAVKSTIQSLMKLKSPE 750


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -1

Query: 190 KNPEQTVTLSSEHQDMKWLSLQEAQEIS 107
           +N   +V L +    MKW  ++ A EIS
Sbjct: 198 ENKNGSVILDTARCSMKWTLIEHAFEIS 225


>DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.
          Length = 135

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -3

Query: 449 QVWLFSEIIIKLSNSY 402
           +V LFSE +IK  N+Y
Sbjct: 58  KVQLFSECLIKKFNAY 73


>DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.
          Length = 135

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -3

Query: 455 EPQVWLFSEIIIKLSNSY 402
           + +V LFSE +IK  N Y
Sbjct: 56  DEKVQLFSECLIKKFNGY 73


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 11/31 (35%), Positives = 12/31 (38%)
 Frame = -2

Query: 381 EHHWTPPKGHVDPGETDWMTALRETKEEAGL 289
           EH W   K   DP E   +T L    E   L
Sbjct: 74  EHEWQDHKFQWDPAEYGGVTELYVPSEHIWL 104


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/27 (29%), Positives = 17/27 (62%)
 Frame = -3

Query: 503 VMQKFKN*NRSYVFF*EPQVWLFSEII 423
           +  + +N NR++ F  + Q ++F E+I
Sbjct: 220 IYSRVRNLNRTHGFPNDAQPYIFQEVI 246


>DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.
          Length = 143

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 6/19 (31%), Positives = 14/19 (73%)
 Frame = -1

Query: 115 EISKYEDMRQLLAEFYEKC 59
           EIS  ++ R++ +++ +KC
Sbjct: 25  EISDIDEFREMTSKYRKKC 43


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 5/16 (31%), Positives = 10/16 (62%)
 Frame = +1

Query: 346 INMSFWWCPMMFSVGC 393
           ++ + WW  + FS+ C
Sbjct: 1   MSFNIWWLILYFSIVC 16


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 6/9 (66%), Positives = 6/9 (66%)
 Frame = -2

Query: 378 HHWTPPKGH 352
           HH  PP GH
Sbjct: 511 HHVAPPSGH 519


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,329
Number of Sequences: 438
Number of extensions: 2517
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13986774
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)