Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0028
(633 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 28 0.087
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 27 0.15
AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc fi... 26 0.26
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 25 0.61
AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 25 0.81
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 2.5
DQ384991-1|ABD51779.1| 94|Apis mellifera allergen Api m 6 vari... 23 3.3
DQ384990-1|ABD51778.1| 92|Apis mellifera allergen Api m 6 vari... 22 4.3
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 22 4.3
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 22 4.3
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 22 4.3
DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid p... 22 5.7
AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatas... 22 5.7
AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly pro... 22 5.7
AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly pro... 22 5.7
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 21 9.9
AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly pro... 21 9.9
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 27.9 bits (59), Expect = 0.087
Identities = 21/67 (31%), Positives = 36/67 (53%)
Frame = -1
Query: 459 VLDHMGSRQHMQQEQGECREPLAGLEQHQHSMAKQHRMPLLGQQEVPHLLEQQKVQRRVQ 280
++DH S Q QQ+Q + ++ +Q Q +Q + P QQ+ P +QQ+ Q++ Q
Sbjct: 1492 IVDH--SSQKTQQQQPQQQQQ----QQQQQQPQQQSQQP---QQQQPQPQQQQQQQQQQQ 1542
Query: 279 L*EQQME 259
+QQ E
Sbjct: 1543 PQQQQKE 1549
Score = 23.4 bits (48), Expect = 1.9
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = -1
Query: 411 ECREPLAGLEQHQ--HSMAKQHRMPLLGQQEVPHLLEQQKVQRRVQL*EQQMELHRG 247
+ + P L HQ H A+ P QQ+ +QQ+ Q++ Q +QQ + RG
Sbjct: 806 QSQPPHQQLHHHQSTHPQAQAQAQPQQQQQQ-----QQQQPQQQQQQQQQQQQQQRG 857
Score = 23.0 bits (47), Expect = 2.5
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = -1
Query: 429 MQQEQGECREPLAGLEQHQHSMAKQ-HRMPLLGQQEVPHLLEQQKVQRRVQL*EQQMEL 256
++QE + L H S A Q H P QQ+ +Q++ +RR++ E ++E+
Sbjct: 133 IKQETLQRHHHLQNHHHHLQSTAVQDHHRPYQQQQQQQQRQQQRQEERRLRPDEIKVEV 191
Score = 21.0 bits (42), Expect = 9.9
Identities = 12/47 (25%), Positives = 22/47 (46%)
Frame = -1
Query: 420 EQGECREPLAGLEQHQHSMAKQHRMPLLGQQEVPHLLEQQKVQRRVQ 280
EQ + GL++ Q + A + QQ+ +QQ+ Q++ Q
Sbjct: 1187 EQYFATSRIRGLQEQQRNAAMVQQQQQQQQQQQQQQQQQQQQQQQQQ 1233
Score = 21.0 bits (42), Expect = 9.9
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = -1
Query: 366 MAKQHRMPLLGQQEVPHLLEQQKVQRRVQL*EQQMELHRGYGR 238
+ +Q R + QQ+ +QQ+ Q++ Q +QQ + H+ R
Sbjct: 1198 LQEQQRNAAMVQQQQQQQQQQQQQQQQQQQ-QQQQQQHQARER 1239
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 27.1 bits (57), Expect = 0.15
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = -1
Query: 381 QHQHSMAKQHRMPLLGQQEVPHLLEQQKVQRRVQL*EQQMELH 253
Q QH +Q ++ Q+ +QQ+ Q++ Q +QQ + H
Sbjct: 421 QQQHQQQQQQTQHVINAQQPQQQQQQQQQQQQQQQQQQQQQQH 463
>AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc
finger domain-Z2 isoform protein.
Length = 71
Score = 26.2 bits (55), Expect = 0.26
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -1
Query: 564 STNKSFVLSLCRKALCSFSSIEQTLVQIH 478
S K F LC K LCS +S+++ + H
Sbjct: 1 SAKKLFTCQLCGKVLCSKASLKRHVADKH 29
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 25.0 bits (52), Expect = 0.61
Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Frame = -1
Query: 480 HTGNVLEVLDHMGSRQHMQQEQGECREPLAGLEQHQH-SMAKQHRMPLLGQQEVPHLLEQ 304
H G+VL+ D + Q + P +Q QH S A+Q + Q H++ Q
Sbjct: 150 HQGSVLDGPDSPPLVESQMHHQMHTQHPHMQPQQGQHQSQAQQQHL----QAHEQHMMYQ 205
Query: 303 QKVQRRVQL*EQQMELH 253
Q+ Q + + Q +H
Sbjct: 206 QQQQSQAASQQSQPGMH 222
>AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter
transporter-1A protein.
Length = 203
Score = 24.6 bits (51), Expect = 0.81
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -2
Query: 338 WGSKRCRTYWSSKRC 294
WGS C YW++K C
Sbjct: 98 WGS--CNNYWNTKNC 110
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 23.0 bits (47), Expect = 2.5
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = +2
Query: 497 CSIDEKEHKAFLQRLKTKDLLVDKS 571
C + ++++AFL+ L T+ L D+S
Sbjct: 288 CEVICEDYQAFLKHLNTEHTLDDRS 312
>DQ384991-1|ABD51779.1| 94|Apis mellifera allergen Api m 6 variant
2 precursor protein.
Length = 94
Score = 22.6 bits (46), Expect = 3.3
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +2
Query: 230 PSLLP*PLCNSICCSYSCTLRCTFCCSNRCGTSCCPSSGIL 352
P+++P PLC IC C R + + + C P S L
Sbjct: 55 PNVVPKPLCIKICAP-GCVCRLGYLRNKK--KVCVPRSKCL 92
>DQ384990-1|ABD51778.1| 92|Apis mellifera allergen Api m 6 variant
1 precursor protein.
Length = 92
Score = 22.2 bits (45), Expect = 4.3
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +2
Query: 230 PSLLP*PLCNSICCSYSCTLRCTFCCSNRCGTSCCPSS 343
P+++P PLC IC C R + + + C P S
Sbjct: 55 PNVVPKPLCIKICAP-GCVCRLGYLRNKK--KVCVPRS 89
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 22.2 bits (45), Expect = 4.3
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +2
Query: 353 CCFAILCWCCSN 388
CC CWCC N
Sbjct: 11 CC----CWCCDN 18
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 22.2 bits (45), Expect = 4.3
Identities = 6/14 (42%), Positives = 9/14 (64%)
Frame = +2
Query: 353 CCFAILCWCCSNPA 394
CC+ +CW + PA
Sbjct: 488 CCWWKICWTITTPA 501
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 22.2 bits (45), Expect = 4.3
Identities = 6/14 (42%), Positives = 9/14 (64%)
Frame = +2
Query: 353 CCFAILCWCCSNPA 394
CC+ +CW + PA
Sbjct: 541 CCWWKICWTITTPA 554
>DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid
phosphatase protein.
Length = 373
Score = 21.8 bits (44), Expect = 5.7
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -2
Query: 539 VFVERPCVLFHLSNKRWCKSIRGTY 465
+F+ C+LF + R +S RG Y
Sbjct: 124 IFLPEDCLLFTIELDRVLESPRGKY 148
>AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatase
precursor protein.
Length = 388
Score = 21.8 bits (44), Expect = 5.7
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -2
Query: 539 VFVERPCVLFHLSNKRWCKSIRGTY 465
+F+ C+LF + R +S RG Y
Sbjct: 139 IFLPEDCLLFTIELDRVLESPRGKY 163
>AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly
protein MRJP6 protein.
Length = 437
Score = 21.8 bits (44), Expect = 5.7
Identities = 10/25 (40%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = -1
Query: 102 YCW-NSCDCTRFSSNYKGSSDEYDR 31
+ W N DC+ S YK + D++DR
Sbjct: 114 WSWANYKDCSGIVSAYKIAIDKFDR 138
>AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly
protein MRJP5 protein.
Length = 598
Score = 21.8 bits (44), Expect = 5.7
Identities = 10/25 (40%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = -1
Query: 102 YCW-NSCDCTRFSSNYKGSSDEYDR 31
+ W N DC+ S YK + D++DR
Sbjct: 114 WSWANYKDCSGIVSAYKIAIDKFDR 138
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.0 bits (42), Expect = 9.9
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1
Query: 130 HVGYAQAIPQNIPPYA 177
H+G + PQ IPP A
Sbjct: 152 HIGPSTPFPQFIPPNA 167
>AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly
protein MRJP2 protein.
Length = 452
Score = 21.0 bits (42), Expect = 9.9
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = -1
Query: 84 DCTRFSSNYKGSSDEYDR 31
DC++ S +K + D++DR
Sbjct: 118 DCSKIVSAFKIAIDKFDR 135
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,538
Number of Sequences: 438
Number of extensions: 3154
Number of successful extensions: 31
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18949215
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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