SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0067
         (650 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    27   0.12 
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    25   0.48 
X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor pro...    25   0.48 
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    25   0.48 
AF442148-1|AAL35349.1|  199|Apis mellifera apidaecin precursor p...    25   0.48 
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    24   1.5  
EF127805-1|ABL67942.1|  461|Apis mellifera nicotinic acetylcholi...    23   2.6  
EF127804-1|ABL67941.1|  461|Apis mellifera nicotinic acetylcholi...    23   2.6  
EF127803-1|ABL67940.1|  461|Apis mellifera nicotinic acetylcholi...    23   2.6  
EF127802-1|ABL67939.1|  461|Apis mellifera nicotinic acetylcholi...    23   2.6  
EF127801-1|ABL67938.1|  461|Apis mellifera nicotinic acetylcholi...    23   2.6  
EF127800-1|ABL67937.1|  461|Apis mellifera nicotinic acetylcholi...    23   2.6  
DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholi...    23   2.6  
DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholi...    23   2.6  
DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex det...    22   4.5  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   4.5  
DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex det...    22   5.9  
DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex det...    22   5.9  
DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex det...    22   5.9  
AY545000-1|AAS50159.2|  126|Apis mellifera profilin protein.           22   5.9  
AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex det...    22   5.9  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    22   5.9  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    22   5.9  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   7.8  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   7.8  

>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 27.5 bits (58), Expect = 0.12
 Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 2/26 (7%)
 Frame = -2

Query: 115 VGVVAAL--DVHFVLSRPHYLGDHEV 44
           +G++ A   DVH V+   H++GDH+V
Sbjct: 101 LGIIIAYTGDVHGVIGAGHWIGDHDV 126


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 25.4 bits (53), Expect = 0.48
 Identities = 15/38 (39%), Positives = 17/38 (44%)
 Frame = -1

Query: 494 PFHVRLCTNVFRSRERHDNRLVSVPLQRIPQPNLRAVA 381
           P H RL        E  +NR V +P  R P P LR  A
Sbjct: 54  PPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREA 91



 Score = 25.4 bits (53), Expect = 0.48
 Identities = 15/38 (39%), Positives = 17/38 (44%)
 Frame = -1

Query: 494 PFHVRLCTNVFRSRERHDNRLVSVPLQRIPQPNLRAVA 381
           P H RL        E  +NR V +P  R P P LR  A
Sbjct: 110 PPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREA 147



 Score = 25.4 bits (53), Expect = 0.48
 Identities = 15/38 (39%), Positives = 17/38 (44%)
 Frame = -1

Query: 494 PFHVRLCTNVFRSRERHDNRLVSVPLQRIPQPNLRAVA 381
           P H RL        E  +NR V +P  R P P LR  A
Sbjct: 166 PPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREA 203



 Score = 25.4 bits (53), Expect = 0.48
 Identities = 15/38 (39%), Positives = 17/38 (44%)
 Frame = -1

Query: 494 PFHVRLCTNVFRSRERHDNRLVSVPLQRIPQPNLRAVA 381
           P H RL        E  +NR V +P  R P P LR  A
Sbjct: 194 PPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREA 231



 Score = 25.4 bits (53), Expect = 0.48
 Identities = 15/38 (39%), Positives = 17/38 (44%)
 Frame = -1

Query: 494 PFHVRLCTNVFRSRERHDNRLVSVPLQRIPQPNLRAVA 381
           P H RL        E  +NR V +P  R P P LR  A
Sbjct: 222 PPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREA 259



 Score = 22.2 bits (45), Expect = 4.5
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -1

Query: 452 ERHDNRLVSVPLQRIPQPNLRAVA 381
           E  +NR V +P  R P P LR  A
Sbjct: 40  EPGNNRPVYIPQPRPPHPRLRREA 63



 Score = 22.2 bits (45), Expect = 4.5
 Identities = 14/38 (36%), Positives = 16/38 (42%)
 Frame = -1

Query: 494 PFHVRLCTNVFRSRERHDNRLVSVPLQRIPQPNLRAVA 381
           P H RL        E  +NR V +   R P P LR  A
Sbjct: 82  PPHPRLRREAELEAEPGNNRPVYISQPRPPHPRLRREA 119



 Score = 22.2 bits (45), Expect = 4.5
 Identities = 14/38 (36%), Positives = 16/38 (42%)
 Frame = -1

Query: 494 PFHVRLCTNVFRSRERHDNRLVSVPLQRIPQPNLRAVA 381
           P H RL        E  +NR V +   R P P LR  A
Sbjct: 138 PPHPRLRREAELEAEPGNNRPVYISQPRPPHPRLRREA 175


>X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor
           protein.
          Length = 144

 Score = 25.4 bits (53), Expect = 0.48
 Identities = 15/38 (39%), Positives = 17/38 (44%)
 Frame = -1

Query: 494 PFHVRLCTNVFRSRERHDNRLVSVPLQRIPQPNLRAVA 381
           P H RL        E  +NR V +P  R P P LR  A
Sbjct: 55  PPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREA 92



 Score = 25.4 bits (53), Expect = 0.48
 Identities = 15/38 (39%), Positives = 17/38 (44%)
 Frame = -1

Query: 494 PFHVRLCTNVFRSRERHDNRLVSVPLQRIPQPNLRAVA 381
           P H RL        E  +NR V +P  R P P LR  A
Sbjct: 83  PPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREA 120



 Score = 22.2 bits (45), Expect = 4.5
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -1

Query: 452 ERHDNRLVSVPLQRIPQPNLRAVA 381
           E  +NR V +P  R P P LR  A
Sbjct: 41  EPGNNRPVYIPQPRPPHPRLRREA 64



 Score = 22.2 bits (45), Expect = 4.5
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = -1

Query: 494 PFHVRLCTNVFRSRERHDNRLVSVPLQRIPQPNL 393
           P H RL        E  +NR V +P  R P P +
Sbjct: 111 PPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRI 144


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 25.4 bits (53), Expect = 0.48
 Identities = 14/35 (40%), Positives = 16/35 (45%)
 Frame = -1

Query: 494 PFHVRLCTNVFRSRERHDNRLVSVPLQRIPQPNLR 390
           P H RL        E  +NR V +P  R P P LR
Sbjct: 83  PPHPRLRREAESEAEPGNNRPVYIPQPRPPHPRLR 117



 Score = 25.0 bits (52), Expect = 0.63
 Identities = 14/38 (36%), Positives = 17/38 (44%)
 Frame = -1

Query: 494 PFHVRLCTNVFRSRERHDNRLVSVPLQRIPQPNLRAVA 381
           P H RL        E  +NR + +P  R P P LR  A
Sbjct: 55  PPHPRLRREAEPKAEPGNNRPIYIPQPRPPHPRLRREA 92



 Score = 21.8 bits (44), Expect = 5.9
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -1

Query: 452 ERHDNRLVSVPLQRIPQPNLRAVA 381
           E  +NR + +P  R P P LR  A
Sbjct: 41  EPGNNRPIYIPQPRPPHPRLRREA 64



 Score = 21.8 bits (44), Expect = 5.9
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -1

Query: 452 ERHDNRLVSVPLQRIPQPNLR 390
           E  +NR V +P  R P P LR
Sbjct: 123 EPGNNRPVYIPQPRPPHPRLR 143


>AF442148-1|AAL35349.1|  199|Apis mellifera apidaecin precursor
           protein.
          Length = 199

 Score = 25.4 bits (53), Expect = 0.48
 Identities = 15/38 (39%), Positives = 17/38 (44%)
 Frame = -1

Query: 494 PFHVRLCTNVFRSRERHDNRLVSVPLQRIPQPNLRAVA 381
           P H RL        E  +NR V +P  R P P LR  A
Sbjct: 26  PPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREA 63



 Score = 25.4 bits (53), Expect = 0.48
 Identities = 15/38 (39%), Positives = 17/38 (44%)
 Frame = -1

Query: 494 PFHVRLCTNVFRSRERHDNRLVSVPLQRIPQPNLRAVA 381
           P H RL        E  +NR V +P  R P P LR  A
Sbjct: 54  PPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREA 91



 Score = 25.4 bits (53), Expect = 0.48
 Identities = 15/38 (39%), Positives = 17/38 (44%)
 Frame = -1

Query: 494 PFHVRLCTNVFRSRERHDNRLVSVPLQRIPQPNLRAVA 381
           P H RL        E  +NR V +P  R P P LR  A
Sbjct: 82  PPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREA 119



 Score = 25.4 bits (53), Expect = 0.48
 Identities = 15/38 (39%), Positives = 17/38 (44%)
 Frame = -1

Query: 494 PFHVRLCTNVFRSRERHDNRLVSVPLQRIPQPNLRAVA 381
           P H RL        E  +NR V +P  R P P LR  A
Sbjct: 110 PPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREA 147



 Score = 25.4 bits (53), Expect = 0.48
 Identities = 15/38 (39%), Positives = 17/38 (44%)
 Frame = -1

Query: 494 PFHVRLCTNVFRSRERHDNRLVSVPLQRIPQPNLRAVA 381
           P H RL        E  +NR V +P  R P P LR  A
Sbjct: 138 PPHPRLRREAKPEAEPGNNRPVYIPQPRPPHPRLRREA 175



 Score = 22.2 bits (45), Expect = 4.5
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -1

Query: 452 ERHDNRLVSVPLQRIPQPNLRAVA 381
           E  +NR V +P  R P P LR  A
Sbjct: 12  EPGNNRPVYIPQPRPPHPRLRREA 35



 Score = 22.2 bits (45), Expect = 4.5
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = -1

Query: 494 PFHVRLCTNVFRSRERHDNRLVSVPLQRIPQPNL 393
           P H RL        E  +NR V +P  R P P +
Sbjct: 166 PPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRI 199


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 13/47 (27%), Positives = 22/47 (46%)
 Frame = -2

Query: 541 ESRTVFFQGRFAPCVFHFMSVYVPTYFGVGSGTTIGLYQFPFSVFLS 401
           ES+ + F   +  CV      +VP YFG G+   + +     ++ LS
Sbjct: 846 ESKHIGFT-MYTTCVIWL--AFVPLYFGTGNNVALRITSMSVTISLS 889


>EF127805-1|ABL67942.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 6 protein.
          Length = 461

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +1

Query: 526 KQFEIRFRRCPSDYDDAMC*VQIRKAT 606
           K+  I ++ CP  Y D    +QIR+ T
Sbjct: 168 KKNTITYQCCPEPYVDVTFTIQIRRRT 194


>EF127804-1|ABL67941.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 5 protein.
          Length = 461

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +1

Query: 526 KQFEIRFRRCPSDYDDAMC*VQIRKAT 606
           K+  I ++ CP  Y D    +QIR+ T
Sbjct: 168 KKNTITYQCCPEPYVDVTFTIQIRRRT 194


>EF127803-1|ABL67940.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 4 protein.
          Length = 461

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +1

Query: 526 KQFEIRFRRCPSDYDDAMC*VQIRKAT 606
           K+  I ++ CP  Y D    +QIR+ T
Sbjct: 168 KKNTITYQCCPEPYVDVTFTIQIRRRT 194


>EF127802-1|ABL67939.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 3 protein.
          Length = 461

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +1

Query: 526 KQFEIRFRRCPSDYDDAMC*VQIRKAT 606
           K+  I ++ CP  Y D    +QIR+ T
Sbjct: 168 KKNTITYQCCPEPYVDVTFTIQIRRRT 194


>EF127801-1|ABL67938.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 2 protein.
          Length = 461

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +1

Query: 526 KQFEIRFRRCPSDYDDAMC*VQIRKAT 606
           K+  I ++ CP  Y D    +QIR+ T
Sbjct: 168 KKNTITYQCCPEPYVDVTFTIQIRRRT 194


>EF127800-1|ABL67937.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 1 protein.
          Length = 461

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +1

Query: 526 KQFEIRFRRCPSDYDDAMC*VQIRKAT 606
           K+  I ++ CP  Y D    +QIR+ T
Sbjct: 168 KKNTITYQCCPEPYVDVTFTIQIRRRT 194


>DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +1

Query: 526 KQFEIRFRRCPSDYDDAMC*VQIRKAT 606
           K+  I ++ CP  Y D    +QIR+ T
Sbjct: 236 KKNTITYQCCPEPYVDVTFTIQIRRRT 262


>DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +1

Query: 526 KQFEIRFRRCPSDYDDAMC*VQIRKAT 606
           K+  I ++ CP  Y D    +QIR+ T
Sbjct: 236 KKNTITYQCCPEPYVDVTFTIQIRRRT 262


>DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex
           determiner protein.
          Length = 176

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +3

Query: 435 PIVVPLPTPKYVG 473
           P+ VP+P P Y G
Sbjct: 112 PVPVPIPVPVYYG 124


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = +1

Query: 166 TGRRAEYTIVSNTRSGTDPTGSLW 237
           T RR E  ++     G  P G LW
Sbjct: 787 TARRGEPAVLQCEAQGEKPIGILW 810


>DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +3

Query: 435 PIVVPLPTPKYVG 473
           P+ VP+P P Y G
Sbjct: 112 PVPVPVPVPVYYG 124


>DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +3

Query: 435 PIVVPLPTPKYVG 473
           P+ VP+P P Y G
Sbjct: 112 PVPVPVPVPVYYG 124


>DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +3

Query: 435 PIVVPLPTPKYVG 473
           P+ VP+P P Y G
Sbjct: 112 PVPVPVPVPVYYG 124


>AY545000-1|AAS50159.2|  126|Apis mellifera profilin protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +3

Query: 321 RLIYSSPAKRICKFTVTNTGSHCSK 395
           R IY S   R+ +  +   G HC K
Sbjct: 67  RYIYLSGTDRVIRAKLGKVGVHCMK 91


>AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex
           determiner protein.
          Length = 410

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +3

Query: 435 PIVVPLPTPKYVG 473
           P+ VP+P P Y G
Sbjct: 345 PVPVPVPVPVYYG 357


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 13/49 (26%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = +3

Query: 324 LIYSSP-AKRICKFTVTNTGSHCSKVWLRNTLKGN*YKPIVVPLPTPKY 467
           +++ +P  KR+    + + G+ C K    NT  G+    IV   P  +Y
Sbjct: 353 VLWQNPRTKRLVNIGIISWGAECGKYPNGNTKVGSYIDWIVSQTPDAEY 401



 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -2

Query: 448 GTTIGLYQFPFSVFLSQTFE 389
           GT  G+ +FP    + +T+E
Sbjct: 164 GTNTGINEFPMMAGIKRTYE 183


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -3

Query: 279 SSLRPPSFSLHAVGPQ 232
           +S+  PSFS+H V P+
Sbjct: 29  ASVEQPSFSVHQVYPE 44


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 13/49 (26%), Positives = 22/49 (44%)
 Frame = -2

Query: 541 ESRTVFFQGRFAPCVFHFMSVYVPTYFGVGSGTTIGLYQFPFSVFLSQT 395
           ES+ + F   +  C+      +VP YFG G+     +     ++ LS T
Sbjct: 704 ESKFIGFT-MYTTCIIWL--AFVPIYFGTGNAHETQITTLCVAISLSAT 749


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 13/49 (26%), Positives = 22/49 (44%)
 Frame = -2

Query: 541 ESRTVFFQGRFAPCVFHFMSVYVPTYFGVGSGTTIGLYQFPFSVFLSQT 395
           ES+ + F   +  C+      +VP YFG G+     +     ++ LS T
Sbjct: 794 ESKFIGFT-MYTTCIIWL--AFVPIYFGTGNAHETQITTLCVAISLSAT 839


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,595
Number of Sequences: 438
Number of extensions: 4858
Number of successful extensions: 48
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -