Silkworm BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0031
         (350 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    21   4.2  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   5.6  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    21   5.6  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    21   5.6  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    20   7.4  
AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc fi...    20   9.8  

>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.0 bits (42), Expect = 4.2
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 51  ELTLEHFTTKAMLRFHPKLGSE 116
           E+ LEH   +A    HP+L ++
Sbjct: 149 EMLLEHKKRRARRDIHPELNTQ 170


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +1

Query: 97  IPSWEVNVAVS 129
           +P+WEVN+  S
Sbjct: 125 VPTWEVNILKS 135


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -2

Query: 328 GVGSTSPVRPTL 293
           G GST+P  PTL
Sbjct: 20  GGGSTTPASPTL 31


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 7/22 (31%), Positives = 9/22 (40%)
 Frame = +2

Query: 281 EFVEQCGAHWRCTAHTTVKCGN 346
           EFVE    +W C      +  N
Sbjct: 522 EFVEDSDDYWNCVIQYNTRAEN 543


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +2

Query: 137 LLLPTCSDWHNYSGIMAP 190
           LL+ T   W N+  ++AP
Sbjct: 126 LLISTGQKWRNHRKLIAP 143


>AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc
           finger domain-Z2 isoform protein.
          Length = 71

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 6/25 (24%), Positives = 14/25 (56%)
 Frame = -3

Query: 168 LCQSEHVGRSSIATHCHVHFPTWDG 94
           +C+  +  R+S+ TH + +  +  G
Sbjct: 40  ICERVYCSRNSLMTHIYTYHKSRPG 64


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,968
Number of Sequences: 438
Number of extensions: 1981
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8060325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)