Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10453
(656 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 180 8e-46
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 180 8e-46
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 180 8e-46
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 180 1e-45
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 179 1e-45
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 178 3e-45
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 177 5e-45
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 176 1e-44
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 173 1e-43
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 62 4e-10
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 59 3e-09
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 59 3e-09
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 58 5e-09
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 58 5e-09
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 58 5e-09
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 51 8e-07
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 42 4e-04
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 42 4e-04
At2g38710.1 68415.m04754 AMMECR1 family similar to AMMECR1 (GI:6... 32 0.29
At4g14713.1 68417.m02261 expressed protein 29 2.1
At5g60120.1 68418.m07537 AP2 domain-containing transcription fac... 28 6.3
At3g52990.1 68416.m05841 pyruvate kinase, putative similar to py... 28 6.3
At1g78170.1 68414.m09109 expressed protein 28 6.3
At1g30400.1 68414.m03716 glutathione S-conjugate ABC transporter... 28 6.3
At1g26910.1 68414.m03281 60S ribosomal protein L10 (RPL10B) Near... 28 6.3
At1g14320.1 68414.m01697 60S ribosomal protein L10 (RPL10A) / Wi... 28 6.3
At1g29950.2 68414.m03661 expressed protein 27 8.3
At1g29950.1 68414.m03660 expressed protein 27 8.3
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 180 bits (438), Expect = 8e-46
Identities = 82/130 (63%), Positives = 102/130 (78%)
Frame = +3
Query: 258 DPRHGRYLTVAAIFRGRMSMKEVDEQMLSIQNKNSSFFVEWIPNNVKTAVCDIPPKGLKM 437
DPRHGRYLT +A+FRG+MS KEVDEQML++QNKNSS+FVEWIPNNVK+ VCDIPP GLKM
Sbjct: 304 DPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKM 363
Query: 438 SSTFIGNTTAIQELFKRISEQFSACSDVKLSCTGTPARAWTRWSSTKQRATSNDLVSEYQ 617
+STFIGN+T+IQE+F+R+SEQF+A K T+ + NDLVSEYQ
Sbjct: 364 ASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 423
Query: 618 QYQEATAEDD 647
QYQ+ATA+++
Sbjct: 424 QYQDATADEE 433
Score = 92.7 bits (220), Expect = 2e-19
Identities = 40/49 (81%), Positives = 47/49 (95%)
Frame = +1
Query: 103 QVAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELAQQMFDAKNMM 249
++AVN++PFPRLHFFM GFAPLTSRGSQQYR+LTVPEL QQM+D+KNMM
Sbjct: 252 KLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDSKNMM 300
Score = 65.3 bits (152), Expect = 3e-11
Identities = 27/33 (81%), Positives = 31/33 (93%)
Frame = +2
Query: 8 PTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRK 106
P++GDLNHL+S TMSGVT CLRFPGQLN+DLRK
Sbjct: 220 PSFGDLNHLISATMSGVTCCLRFPGQLNSDLRK 252
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 180 bits (438), Expect = 8e-46
Identities = 82/130 (63%), Positives = 102/130 (78%)
Frame = +3
Query: 258 DPRHGRYLTVAAIFRGRMSMKEVDEQMLSIQNKNSSFFVEWIPNNVKTAVCDIPPKGLKM 437
DPRHGRYLT +A+FRG+MS KEVDEQML++QNKNSS+FVEWIPNNVK+ VCDIPP GLKM
Sbjct: 304 DPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKM 363
Query: 438 SSTFIGNTTAIQELFKRISEQFSACSDVKLSCTGTPARAWTRWSSTKQRATSNDLVSEYQ 617
+STFIGN+T+IQE+F+R+SEQF+A K T+ + NDLVSEYQ
Sbjct: 364 ASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 423
Query: 618 QYQEATAEDD 647
QYQ+ATA+++
Sbjct: 424 QYQDATADEE 433
Score = 92.7 bits (220), Expect = 2e-19
Identities = 40/49 (81%), Positives = 47/49 (95%)
Frame = +1
Query: 103 QVAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELAQQMFDAKNMM 249
++AVN++PFPRLHFFM GFAPLTSRGSQQYR+LTVPEL QQM+D+KNMM
Sbjct: 252 KLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDSKNMM 300
Score = 65.3 bits (152), Expect = 3e-11
Identities = 27/33 (81%), Positives = 31/33 (93%)
Frame = +2
Query: 8 PTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRK 106
P++GDLNHL+S TMSGVT CLRFPGQLN+DLRK
Sbjct: 220 PSFGDLNHLISATMSGVTCCLRFPGQLNSDLRK 252
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 180 bits (438), Expect = 8e-46
Identities = 82/130 (63%), Positives = 102/130 (78%)
Frame = +3
Query: 258 DPRHGRYLTVAAIFRGRMSMKEVDEQMLSIQNKNSSFFVEWIPNNVKTAVCDIPPKGLKM 437
DPRHGRYLT +A+FRG+MS KEVDEQML++QNKNSS+FVEWIPNNVK+ VCDIPP GLKM
Sbjct: 304 DPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKM 363
Query: 438 SSTFIGNTTAIQELFKRISEQFSACSDVKLSCTGTPARAWTRWSSTKQRATSNDLVSEYQ 617
+STFIGN+T+IQE+F+R+SEQF+A K T+ + NDLVSEYQ
Sbjct: 364 ASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 423
Query: 618 QYQEATAEDD 647
QYQ+ATA+++
Sbjct: 424 QYQDATADEE 433
Score = 92.7 bits (220), Expect = 2e-19
Identities = 41/49 (83%), Positives = 46/49 (93%)
Frame = +1
Query: 103 QVAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELAQQMFDAKNMM 249
++AVN++PFPRLHFFM GFAPLTSRGSQQYR LTVPEL QQM+DAKNMM
Sbjct: 252 KLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRNLTVPELTQQMWDAKNMM 300
Score = 65.3 bits (152), Expect = 3e-11
Identities = 27/33 (81%), Positives = 31/33 (93%)
Frame = +2
Query: 8 PTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRK 106
P++GDLNHL+S TMSGVT CLRFPGQLN+DLRK
Sbjct: 220 PSFGDLNHLISATMSGVTCCLRFPGQLNSDLRK 252
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 180 bits (437), Expect = 1e-45
Identities = 81/130 (62%), Positives = 104/130 (80%)
Frame = +3
Query: 258 DPRHGRYLTVAAIFRGRMSMKEVDEQMLSIQNKNSSFFVEWIPNNVKTAVCDIPPKGLKM 437
DPRHGRYLT +AIFRG+MS KEVDEQ+L+IQNKNSS+FVEWIPNNVK++VCDIPPKGLKM
Sbjct: 305 DPRHGRYLTASAIFRGQMSTKEVDEQILNIQNKNSSYFVEWIPNNVKSSVCDIPPKGLKM 364
Query: 438 SSTFIGNTTAIQELFKRISEQFSACSDVKLSCTGTPARAWTRWSSTKQRATSNDLVSEYQ 617
++TF+GN+T+IQE+F+R+SEQF+A K T+ + NDLV+EYQ
Sbjct: 365 AATFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQ 424
Query: 618 QYQEATAEDD 647
QYQ+ATA+++
Sbjct: 425 QYQDATADEE 434
Score = 89.4 bits (212), Expect = 2e-18
Identities = 39/49 (79%), Positives = 46/49 (93%)
Frame = +1
Query: 103 QVAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELAQQMFDAKNMM 249
++AVN++PFPRLHFFM GFAPLTSRGSQQY +LTVPEL QQM+D+KNMM
Sbjct: 253 KLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDSKNMM 301
Score = 61.3 bits (142), Expect = 6e-10
Identities = 26/33 (78%), Positives = 30/33 (90%)
Frame = +2
Query: 8 PTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRK 106
P++GDLNHL+S TMSGVT LRFPGQLN+DLRK
Sbjct: 221 PSFGDLNHLISATMSGVTCSLRFPGQLNSDLRK 253
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 179 bits (436), Expect = 1e-45
Identities = 81/130 (62%), Positives = 102/130 (78%)
Frame = +3
Query: 258 DPRHGRYLTVAAIFRGRMSMKEVDEQMLSIQNKNSSFFVEWIPNNVKTAVCDIPPKGLKM 437
DPRHGRYLT +A+FRG+MS KEVDEQM+++QNKNSS+FVEWIPNNVK+ VCDIPP GLKM
Sbjct: 304 DPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKM 363
Query: 438 SSTFIGNTTAIQELFKRISEQFSACSDVKLSCTGTPARAWTRWSSTKQRATSNDLVSEYQ 617
+STFIGN+T+IQE+F+R+SEQF+A K T+ + NDLVSEYQ
Sbjct: 364 ASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 423
Query: 618 QYQEATAEDD 647
QYQ+ATA+++
Sbjct: 424 QYQDATADEE 433
Score = 95.1 bits (226), Expect = 4e-20
Identities = 42/49 (85%), Positives = 47/49 (95%)
Frame = +1
Query: 103 QVAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELAQQMFDAKNMM 249
++AVN++PFPRLHFFM GFAPLTSRGSQQYRALTVPEL QQM+DAKNMM
Sbjct: 252 KLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300
Score = 65.3 bits (152), Expect = 3e-11
Identities = 27/33 (81%), Positives = 31/33 (93%)
Frame = +2
Query: 8 PTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRK 106
P++GDLNHL+S TMSGVT CLRFPGQLN+DLRK
Sbjct: 220 PSFGDLNHLISATMSGVTCCLRFPGQLNSDLRK 252
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 178 bits (433), Expect = 3e-45
Identities = 79/131 (60%), Positives = 104/131 (79%)
Frame = +3
Query: 258 DPRHGRYLTVAAIFRGRMSMKEVDEQMLSIQNKNSSFFVEWIPNNVKTAVCDIPPKGLKM 437
DPRHGRYLT +A+FRG+MS KEVDEQ+L++QNKNSS+FVEWIPNNVK++VCDIPP G+KM
Sbjct: 305 DPRHGRYLTASAMFRGKMSTKEVDEQILNVQNKNSSYFVEWIPNNVKSSVCDIPPTGIKM 364
Query: 438 SSTFIGNTTAIQELFKRISEQFSACSDVKLSCTGTPARAWTRWSSTKQRATSNDLVSEYQ 617
+STF+GN+T+IQE+F+R+SEQF+A K T+ + NDLVSEYQ
Sbjct: 365 ASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 424
Query: 618 QYQEATAEDDN 650
QYQ+ATA++++
Sbjct: 425 QYQDATADEED 435
Score = 90.6 bits (215), Expect = 8e-19
Identities = 40/49 (81%), Positives = 46/49 (93%)
Frame = +1
Query: 103 QVAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELAQQMFDAKNMM 249
++AVN++PFPRLHFFM GFAPLTSRGSQQY +LTVPEL QQM+DAKNMM
Sbjct: 253 KLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDAKNMM 301
Score = 61.3 bits (142), Expect = 6e-10
Identities = 26/33 (78%), Positives = 30/33 (90%)
Frame = +2
Query: 8 PTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRK 106
P++GDLNHL+S TMSGVT LRFPGQLN+DLRK
Sbjct: 221 PSFGDLNHLISATMSGVTCSLRFPGQLNSDLRK 253
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 177 bits (431), Expect = 5e-45
Identities = 80/130 (61%), Positives = 102/130 (78%)
Frame = +3
Query: 258 DPRHGRYLTVAAIFRGRMSMKEVDEQMLSIQNKNSSFFVEWIPNNVKTAVCDIPPKGLKM 437
DPRHGRYLT +A+FRG+MS KEVDEQM+++QNKNSS+FVEWIPNNVK++VCDI P+GL M
Sbjct: 304 DPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPRGLSM 363
Query: 438 SSTFIGNTTAIQELFKRISEQFSACSDVKLSCTGTPARAWTRWSSTKQRATSNDLVSEYQ 617
+STFIGN+T+IQE+F+R+SEQF+A K T+ + NDLVSEYQ
Sbjct: 364 ASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 423
Query: 618 QYQEATAEDD 647
QYQ+ATA+D+
Sbjct: 424 QYQDATADDE 433
Score = 93.9 bits (223), Expect = 8e-20
Identities = 41/49 (83%), Positives = 47/49 (95%)
Frame = +1
Query: 103 QVAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELAQQMFDAKNMM 249
++AVN++PFPRLHFFM GFAPLTSRGSQQYRALTVPEL QQM+D+KNMM
Sbjct: 252 KLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMM 300
Score = 65.3 bits (152), Expect = 3e-11
Identities = 27/33 (81%), Positives = 31/33 (93%)
Frame = +2
Query: 8 PTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRK 106
P++GDLNHL+S TMSGVT CLRFPGQLN+DLRK
Sbjct: 220 PSFGDLNHLISATMSGVTCCLRFPGQLNSDLRK 252
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 176 bits (428), Expect = 1e-44
Identities = 80/130 (61%), Positives = 102/130 (78%)
Frame = +3
Query: 258 DPRHGRYLTVAAIFRGRMSMKEVDEQMLSIQNKNSSFFVEWIPNNVKTAVCDIPPKGLKM 437
DPRHGRYLT +A+FRG++S KEVDEQM++IQNKNSS+FVEWIPNNVK++VCDI PKGLKM
Sbjct: 304 DPRHGRYLTASAVFRGKLSTKEVDEQMMNIQNKNSSYFVEWIPNNVKSSVCDIAPKGLKM 363
Query: 438 SSTFIGNTTAIQELFKRISEQFSACSDVKLSCTGTPARAWTRWSSTKQRATSNDLVSEYQ 617
+STFIGN+T+IQE+F+R+SEQF+A K T+ + NDLV+EYQ
Sbjct: 364 ASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQ 423
Query: 618 QYQEATAEDD 647
QYQ+ATA ++
Sbjct: 424 QYQDATAGEE 433
Score = 91.1 bits (216), Expect = 6e-19
Identities = 40/49 (81%), Positives = 46/49 (93%)
Frame = +1
Query: 103 QVAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELAQQMFDAKNMM 249
++AVN++PFPRLHFFM GFAPLTSRGSQQY AL+VPEL QQM+DAKNMM
Sbjct: 252 KLAVNLIPFPRLHFFMVGFAPLTSRGSQQYSALSVPELTQQMWDAKNMM 300
Score = 69.3 bits (162), Expect = 2e-12
Identities = 29/34 (85%), Positives = 32/34 (94%)
Frame = +2
Query: 5 NPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRK 106
NPT+GDLNHL+S TMSGVT CLRFPGQLN+DLRK
Sbjct: 219 NPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRK 252
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 173 bits (420), Expect = 1e-43
Identities = 78/130 (60%), Positives = 100/130 (76%)
Frame = +3
Query: 258 DPRHGRYLTVAAIFRGRMSMKEVDEQMLSIQNKNSSFFVEWIPNNVKTAVCDIPPKGLKM 437
DPRHGRYLT +A+FRG+MS KEVDEQM+++QNKNSS+FVEWIPNNVK++VCDI P GLKM
Sbjct: 304 DPRHGRYLTASAVFRGKMSTKEVDEQMMNVQNKNSSYFVEWIPNNVKSSVCDIAPTGLKM 363
Query: 438 SSTFIGNTTAIQELFKRISEQFSACSDVKLSCTGTPARAWTRWSSTKQRATSNDLVSEYQ 617
+STFIGN+T+IQE+F+R+SEQF+A K T+ + NDLV+EYQ
Sbjct: 364 ASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQ 423
Query: 618 QYQEATAEDD 647
QYQ+AT ++
Sbjct: 424 QYQDATVGEE 433
Score = 91.1 bits (216), Expect = 6e-19
Identities = 40/49 (81%), Positives = 46/49 (93%)
Frame = +1
Query: 103 QVAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELAQQMFDAKNMM 249
++AVN++PFPRLHFFM GFAPLTSRGSQQY AL+VPEL QQM+DAKNMM
Sbjct: 252 KLAVNLIPFPRLHFFMVGFAPLTSRGSQQYSALSVPELTQQMWDAKNMM 300
Score = 69.3 bits (162), Expect = 2e-12
Identities = 29/34 (85%), Positives = 32/34 (94%)
Frame = +2
Query: 5 NPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRK 106
NPT+GDLNHL+S TMSGVT CLRFPGQLN+DLRK
Sbjct: 219 NPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRK 252
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 61.7 bits (143), Expect = 4e-10
Identities = 36/141 (25%), Positives = 63/141 (44%), Gaps = 8/141 (5%)
Frame = +3
Query: 252 RCDPRHGRYLTVAAIFRGRMSMKEVDEQMLSIQNKNSSFFVEWIPNNVKTAVCDIPPK-- 425
+CDPRHG+Y+ ++RG + K+V+ + +I+ K + FV+W P K + PP
Sbjct: 304 KCDPRHGKYMACCLMYRGDVVPKDVNTAVAAIKAKRTIQFVDWCPTGFKCGINYQPPSVV 363
Query: 426 ------GLKMSSTFIGNTTAIQELFKRISEQFSACSDVKLSCTGTPARAWTRWSSTKQRA 587
++ + I N TA+ E+F RI +F + ++ R
Sbjct: 364 PGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEARE 423
Query: 588 TSNDLVSEYQQYQEATAEDDN 650
L +Y++ AEDD+
Sbjct: 424 DLAALEKDYEEVGGEGAEDDD 444
Score = 48.0 bits (109), Expect = 5e-06
Identities = 17/45 (37%), Positives = 28/45 (62%)
Frame = +1
Query: 115 NMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELAQQMFDAKNMM 249
N+VP+PR+HF + +AP+ S + +VPE+ +F+ NMM
Sbjct: 258 NLVPYPRIHFMLSSYAPVISSAKAYHEQFSVPEITTSVFEPSNMM 302
Score = 44.8 bits (101), Expect = 5e-05
Identities = 18/40 (45%), Positives = 28/40 (70%)
Frame = +2
Query: 8 PTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKWRSTWCP 127
PTY +LN L+S T+S +TT LRF G +N D+ ++++ P
Sbjct: 222 PTYSNLNRLISQTISSLTTSLRFDGAINVDITEFQTNLVP 261
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 58.8 bits (136), Expect = 3e-09
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 8/92 (8%)
Frame = +3
Query: 252 RCDPRHGRYLTVAAIFRGRMSMKEVDEQMLSIQNKNSSFFVEWIPNNVKTAVCDIPP--- 422
+CDPRHG+Y+ ++RG + K+V+ + +I+ K + FV+W P K + PP
Sbjct: 304 KCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTVQFVDWCPTGFKCGINYQPPTVV 363
Query: 423 -----KGLKMSSTFIGNTTAIQELFKRISEQF 503
++ + I N TA+ E+F RI +F
Sbjct: 364 PGGDLAKVQRAVCMISNNTAVAEVFSRIDHKF 395
Score = 47.2 bits (107), Expect = 1e-05
Identities = 17/45 (37%), Positives = 29/45 (64%)
Frame = +1
Query: 115 NMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELAQQMFDAKNMM 249
N+VP+PR+HF + +AP+ S + L+VPE+ +F+ +MM
Sbjct: 258 NLVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPASMM 302
Score = 43.2 bits (97), Expect = 2e-04
Identities = 15/28 (53%), Positives = 23/28 (82%)
Frame = +2
Query: 509 MFRRKAFLHWYTGEGMDEMEFNEAESNV 592
M+ ++AF+HWY GEGM+E EF+EA ++
Sbjct: 398 MYAKRAFVHWYVGEGMEEGEFSEAREDL 425
Score = 41.5 bits (93), Expect = 5e-04
Identities = 17/40 (42%), Positives = 27/40 (67%)
Frame = +2
Query: 8 PTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKWRSTWCP 127
PTY +LN L+S +S +TT LRF G +N D+ ++++ P
Sbjct: 222 PTYTNLNRLISQIISSLTTSLRFDGAINVDITEFQTNLVP 261
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 58.8 bits (136), Expect = 3e-09
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 8/92 (8%)
Frame = +3
Query: 252 RCDPRHGRYLTVAAIFRGRMSMKEVDEQMLSIQNKNSSFFVEWIPNNVKTAVCDIPP--- 422
+CDPRHG+Y+ ++RG + K+V+ + +I+ K + FV+W P K + PP
Sbjct: 304 KCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTVQFVDWCPTGFKCGINYQPPTVV 363
Query: 423 -----KGLKMSSTFIGNTTAIQELFKRISEQF 503
++ + I N TA+ E+F RI +F
Sbjct: 364 PGGDLAKVQRAVCMISNNTAVAEVFSRIDHKF 395
Score = 47.2 bits (107), Expect = 1e-05
Identities = 17/45 (37%), Positives = 29/45 (64%)
Frame = +1
Query: 115 NMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELAQQMFDAKNMM 249
N+VP+PR+HF + +AP+ S + L+VPE+ +F+ +MM
Sbjct: 258 NLVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPASMM 302
Score = 43.2 bits (97), Expect = 2e-04
Identities = 15/28 (53%), Positives = 23/28 (82%)
Frame = +2
Query: 509 MFRRKAFLHWYTGEGMDEMEFNEAESNV 592
M+ ++AF+HWY GEGM+E EF+EA ++
Sbjct: 398 MYAKRAFVHWYVGEGMEEGEFSEAREDL 425
Score = 41.5 bits (93), Expect = 5e-04
Identities = 17/40 (42%), Positives = 27/40 (67%)
Frame = +2
Query: 8 PTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKWRSTWCP 127
PTY +LN L+S +S +TT LRF G +N D+ ++++ P
Sbjct: 222 PTYTNLNRLISQIISSLTTSLRFDGAINVDITEFQTNLVP 261
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 58.0 bits (134), Expect = 5e-09
Identities = 28/92 (30%), Positives = 50/92 (54%), Gaps = 8/92 (8%)
Frame = +3
Query: 252 RCDPRHGRYLTVAAIFRGRMSMKEVDEQMLSIQNKNSSFFVEWIPNNVKTAVCDIPP--- 422
+CDPRHG+Y+ ++RG + K+V+ + +I+ K + FV+W P K + PP
Sbjct: 304 KCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPPTVV 363
Query: 423 -----KGLKMSSTFIGNTTAIQELFKRISEQF 503
++ + I N+T++ E+F RI +F
Sbjct: 364 PGGDLAKVQRAVCMISNSTSVAEVFSRIDHKF 395
Score = 43.2 bits (97), Expect = 2e-04
Identities = 15/28 (53%), Positives = 23/28 (82%)
Frame = +2
Query: 509 MFRRKAFLHWYTGEGMDEMEFNEAESNV 592
M+ ++AF+HWY GEGM+E EF+EA ++
Sbjct: 398 MYAKRAFVHWYVGEGMEEGEFSEAREDL 425
Score = 41.9 bits (94), Expect = 4e-04
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +1
Query: 115 NMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELAQQMFDAKNMM 249
N+VP+PR+HF + +AP+ S + L+V E+ F+ +MM
Sbjct: 258 NLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMM 302
Score = 40.7 bits (91), Expect = 8e-04
Identities = 18/40 (45%), Positives = 26/40 (65%)
Frame = +2
Query: 8 PTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKWRSTWCP 127
PTY +LN LVS +S +T LRF G LN D+ ++++ P
Sbjct: 222 PTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVP 261
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 58.0 bits (134), Expect = 5e-09
Identities = 28/92 (30%), Positives = 50/92 (54%), Gaps = 8/92 (8%)
Frame = +3
Query: 252 RCDPRHGRYLTVAAIFRGRMSMKEVDEQMLSIQNKNSSFFVEWIPNNVKTAVCDIPP--- 422
+CDPRHG+Y+ ++RG + K+V+ + +I+ K + FV+W P K + PP
Sbjct: 304 KCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPPTVV 363
Query: 423 -----KGLKMSSTFIGNTTAIQELFKRISEQF 503
++ + I N+T++ E+F RI +F
Sbjct: 364 PGGDLAKVQRAVCMISNSTSVAEVFSRIDHKF 395
Score = 43.2 bits (97), Expect = 2e-04
Identities = 15/28 (53%), Positives = 23/28 (82%)
Frame = +2
Query: 509 MFRRKAFLHWYTGEGMDEMEFNEAESNV 592
M+ ++AF+HWY GEGM+E EF+EA ++
Sbjct: 398 MYAKRAFVHWYVGEGMEEGEFSEAREDL 425
Score = 41.9 bits (94), Expect = 4e-04
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +1
Query: 115 NMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELAQQMFDAKNMM 249
N+VP+PR+HF + +AP+ S + L+V E+ F+ +MM
Sbjct: 258 NLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMM 302
Score = 40.7 bits (91), Expect = 8e-04
Identities = 18/40 (45%), Positives = 26/40 (65%)
Frame = +2
Query: 8 PTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKWRSTWCP 127
PTY +LN LVS +S +T LRF G LN D+ ++++ P
Sbjct: 222 PTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVP 261
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 58.0 bits (134), Expect = 5e-09
Identities = 28/92 (30%), Positives = 50/92 (54%), Gaps = 8/92 (8%)
Frame = +3
Query: 252 RCDPRHGRYLTVAAIFRGRMSMKEVDEQMLSIQNKNSSFFVEWIPNNVKTAVCDIPP--- 422
+CDPRHG+Y+ ++RG + K+V+ + +I+ K + FV+W P K + PP
Sbjct: 304 KCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPPTVV 363
Query: 423 -----KGLKMSSTFIGNTTAIQELFKRISEQF 503
++ + I N+T++ E+F RI +F
Sbjct: 364 PGGDLAKVQRAVCMISNSTSVAEVFSRIDHKF 395
Score = 43.2 bits (97), Expect = 2e-04
Identities = 15/28 (53%), Positives = 23/28 (82%)
Frame = +2
Query: 509 MFRRKAFLHWYTGEGMDEMEFNEAESNV 592
M+ ++AF+HWY GEGM+E EF+EA ++
Sbjct: 398 MYAKRAFVHWYVGEGMEEGEFSEAREDL 425
Score = 41.9 bits (94), Expect = 4e-04
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +1
Query: 115 NMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELAQQMFDAKNMM 249
N+VP+PR+HF + +AP+ S + L+V E+ F+ +MM
Sbjct: 258 NLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMM 302
Score = 40.7 bits (91), Expect = 8e-04
Identities = 18/40 (45%), Positives = 26/40 (65%)
Frame = +2
Query: 8 PTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKWRSTWCP 127
PTY +LN LVS +S +T LRF G LN D+ ++++ P
Sbjct: 222 PTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVP 261
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 50.8 bits (116), Expect = 8e-07
Identities = 20/57 (35%), Positives = 34/57 (59%)
Frame = +3
Query: 252 RCDPRHGRYLTVAAIFRGRMSMKEVDEQMLSIQNKNSSFFVEWIPNNVKTAVCDIPP 422
+CDPRHG+Y+ ++RG + K+V+ + +I+ K + FV+W P K + PP
Sbjct: 304 KCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPP 360
Score = 41.9 bits (94), Expect = 4e-04
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +1
Query: 115 NMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELAQQMFDAKNMM 249
N+VP+PR+HF + +AP+ S + L+V E+ F+ +MM
Sbjct: 258 NLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMM 302
Score = 40.7 bits (91), Expect = 8e-04
Identities = 18/40 (45%), Positives = 26/40 (65%)
Frame = +2
Query: 8 PTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKWRSTWCP 127
PTY +LN LVS +S +T LRF G LN D+ ++++ P
Sbjct: 222 PTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVP 261
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 41.9 bits (94), Expect = 4e-04
Identities = 20/45 (44%), Positives = 26/45 (57%)
Frame = +2
Query: 5 NPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKWRSTWCPSRVC 139
NPT+ N LVS MS TT LR+PG +N DL ++ P+ C
Sbjct: 222 NPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRC 266
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +1
Query: 115 NMVPFPRLHFFMPGFAPLT-SRGSQQYRALTVPELAQQMFDAKNMM 249
+++P PR HF M G+ PLT R + R TV ++ +++ KN+M
Sbjct: 259 SLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIM 304
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 41.9 bits (94), Expect = 4e-04
Identities = 20/45 (44%), Positives = 26/45 (57%)
Frame = +2
Query: 5 NPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKWRSTWCPSRVC 139
NPT+ N LVS MS TT LR+PG +N DL ++ P+ C
Sbjct: 222 NPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRC 266
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +1
Query: 115 NMVPFPRLHFFMPGFAPLT-SRGSQQYRALTVPELAQQMFDAKNMM 249
+++P PR HF M G+ PLT R + R TV ++ +++ KN+M
Sbjct: 259 SLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIM 304
Score = 37.5 bits (83), Expect = 0.008
Identities = 18/80 (22%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Frame = +3
Query: 273 RYLTVAAIFRGRMSMKEVDEQMLSIQNKNSSFFVEWIPNNVKTAVCDIPP---KGLKMSS 443
+Y+++ I +G + +V E + I+ + F+EW P +++ A+ P ++S
Sbjct: 318 KYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSKKSPYVQTAHRVSG 377
Query: 444 TFIGNTTAIQELFKRISEQF 503
+ + T+I+ LF + Q+
Sbjct: 378 LMLASHTSIRHLFSKCLSQY 397
>At2g38710.1 68415.m04754 AMMECR1 family similar to AMMECR1
(GI:6063688) [Homo sapiens]; contains Pfam profile
PF01871: AMMECR1
Length = 214
Score = 32.3 bits (70), Expect = 0.29
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +2
Query: 527 FLHWYTGEGMDEMEFNEAESNVKRSGV*VPTVPGGHRG 640
+L W G+ +EF E E+N KRS +P VP H G
Sbjct: 109 YLDWEVGKHGIIIEFTEPETNTKRSATYLPEVP-AHEG 145
>At4g14713.1 68417.m02261 expressed protein
Length = 313
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = +3
Query: 453 GNTTAIQELFKRISEQFSACSDVKLSCTGTPARAWTRWSSTKQRATSNDLVSE 611
G ++ E+F + A L CTG+P + + S TK S DL SE
Sbjct: 259 GVASSSLEMFLNCQPRMKAAYSQNLGCTGSPLHSQSPESQTKSPNLSVDLNSE 311
>At5g60120.1 68418.m07537 AP2 domain-containing transcription
factor, putative Similar to Floral homeotic protein
APETALA2 protein (SP:P47927) [Arabidopsis thaliana];
homolog HAP2, Hyacinthus orientalis, EMBL:AF134116
Length = 485
Score = 27.9 bits (59), Expect = 6.3
Identities = 17/57 (29%), Positives = 23/57 (40%)
Frame = +3
Query: 387 NNVKTAVCDIPPKGLKMSSTFIGNTTAIQELFKRISEQFSACSDVKLSCTGTPARAW 557
N++ A CD P LK S + N A+ F E+ + S PAR W
Sbjct: 349 NHMAAAACDTPFNFLKRGSDHLNNRHALPSAFFSPMERTPEKGLMLRSHQSFPARTW 405
>At3g52990.1 68416.m05841 pyruvate kinase, putative similar to
pyruvate kinase, cytosolic isozyme [Glycine max]
SWISS-PROT:Q42806
Length = 527
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Frame = +2
Query: 410 RHPSQGS----EDVVYVYREHDSHPGTIQENIRAVLC 508
RHP++ + E V+ V +H H G I+ + R V+C
Sbjct: 475 RHPAESTSATNESVLKVALDHGKHAGVIKSHDRVVVC 511
>At1g78170.1 68414.m09109 expressed protein
Length = 221
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +1
Query: 442 LRLSGTRQPSRNYSREYPSSSLHVQT 519
L LS + PSR +++Y SSS+H +T
Sbjct: 102 LNLSPSGSPSRTTTKKYESSSIHNET 127
>At1g30400.1 68414.m03716 glutathione S-conjugate ABC transporter
(MRP1) identical to glutathione S-conjugate transporting
ATPase (AtMRP1) [Arabidopsis thaliana] GI:2340166
Length = 1622
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +3
Query: 549 RAWTRWSSTKQRATSNDLVSEYQQYQEATAEDDNRV 656
+A +RW++ Q A + L S + Q EDDN +
Sbjct: 1509 QASSRWAAAAQFALAVSLTSSHNDLQSLEIEDDNSI 1544
>At1g26910.1 68414.m03281 60S ribosomal protein L10 (RPL10B) Nearly
identical to ribosomal protein L10.e, Wilm's tumor
suppressor homologue, gi|17682 (Z15157), however
differences in sequence indicate this is a different
member of the L10 family
Length = 221
Score = 27.9 bits (59), Expect = 6.3
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 126 GHHVDRHLRRSAFSCPGNRRHVVT 55
GHH LRR+ F PG ++ +V+
Sbjct: 145 GHHAQEALRRAKFKFPGRQKIIVS 168
>At1g14320.1 68414.m01697 60S ribosomal protein L10 (RPL10A) /
Wilm's tumor suppressor protein-related similar to tumor
suppressor GI:575354 from [Oryza sativa]
Length = 220
Score = 27.9 bits (59), Expect = 6.3
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 126 GHHVDRHLRRSAFSCPGNRRHVVT 55
GHH LRR+ F PG ++ +V+
Sbjct: 145 GHHAQEALRRAKFKFPGRQKIIVS 168
>At1g29950.2 68414.m03661 expressed protein
Length = 251
Score = 27.5 bits (58), Expect = 8.3
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -3
Query: 429 DPWEGCRTRLFSRCWGSTRRRSCCSCFGW 343
D E R SR +G+T SCCS +G+
Sbjct: 144 DSEEVSTARTSSRDYGNTTAESCCSSYGY 172
>At1g29950.1 68414.m03660 expressed protein
Length = 251
Score = 27.5 bits (58), Expect = 8.3
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -3
Query: 429 DPWEGCRTRLFSRCWGSTRRRSCCSCFGW 343
D E R SR +G+T SCCS +G+
Sbjct: 144 DSEEVSTARTSSRDYGNTTAESCCSSYGY 172
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,946,394
Number of Sequences: 28952
Number of extensions: 277673
Number of successful extensions: 1160
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1050
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1135
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1373722560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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