Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10441
(784 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 136 2e-32
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 136 2e-32
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 136 2e-32
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 136 2e-32
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 91 6e-19
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 74 9e-14
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 49 3e-06
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 44 2e-04
At2g46830.1 68415.m05843 myb-related transcription factor (CCA1)... 31 1.1
At1g61850.1 68414.m06979 patatin family protein similar to membr... 29 2.6
At4g01910.1 68417.m00251 DC1 domain-containing protein contains ... 29 3.5
At3g24210.1 68416.m03038 ankyrin repeat family protein contains ... 29 3.5
At2g31060.1 68415.m03790 elongation factor family protein contai... 29 3.5
At1g18900.2 68414.m02353 pentatricopeptide (PPR) repeat-containi... 29 3.5
At1g18900.1 68414.m02352 pentatricopeptide (PPR) repeat-containi... 29 3.5
At4g29900.1 68417.m04254 calcium-transporting ATPase, plasma mem... 29 4.6
At1g47840.1 68414.m05325 hexokinase, putative similar to hexokin... 29 4.6
At5g19490.1 68418.m02322 repressor protein-related similar to re... 28 8.0
At4g18330.2 68417.m02719 eukaryotic translation initiation facto... 28 8.0
At4g18330.1 68417.m02718 eukaryotic translation initiation facto... 28 8.0
At4g13670.1 68417.m02125 peptidoglycan-binding domain-containing... 28 8.0
At3g11390.1 68416.m01387 DC1 domain-containing protein contains ... 28 8.0
At2g42410.1 68415.m05249 zinc finger (C2H2 type) family protein ... 28 8.0
At2g28000.1 68415.m03393 RuBisCO subunit binding-protein alpha s... 28 8.0
At1g35550.1 68414.m04414 elongation factor Tu C-terminal domain-... 28 8.0
At1g27440.1 68414.m03345 exostosin family protein contains Pfam ... 28 8.0
At1g26130.1 68414.m03190 haloacid dehalogenase-like hydrolase fa... 28 8.0
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 136 bits (329), Expect = 2e-32
Identities = 64/84 (76%), Positives = 74/84 (88%)
Frame = +1
Query: 1 MITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPP 180
MITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P
Sbjct: 102 MITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPK 161
Query: 181 YSEPRFEEIKKEVSSYIKKIGYNP 252
YS+ R++EI KEVSSY+KK+GYNP
Sbjct: 162 YSKARYDEIIKEVSSYLKKVGYNP 185
Score = 120 bits (290), Expect = 8e-28
Identities = 54/92 (58%), Positives = 68/92 (73%)
Frame = +2
Query: 509 LKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDXXXXXXXXXXXXELRRGYVAGDSKN 688
+KPG +V FAP +TTEVKSVEMHHE+L EA+PGD +L+RGYVA +SK+
Sbjct: 260 IKPGMVVTFAPTGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGYVASNSKD 319
Query: 689 NPPKGAADFTAQVIVLNHPGQNLKRYTPVLDC 784
+P KGAA+FT+QVI++NHPGQ Y PVLDC
Sbjct: 320 DPAKGAANFTSQVIIMNHPGQIGNGYAPVLDC 351
Score = 107 bits (258), Expect = 6e-24
Identities = 54/87 (62%), Positives = 62/87 (71%)
Frame = +3
Query: 249 PSAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPTDK 428
P + FVPISG+ GDNM+E ST + W+KG L+EALD I P RP+DK
Sbjct: 185 PDKIPFVPISGFEGDNMIERSTNLDWYKG------------PTLLEALDQINEPKRPSDK 232
Query: 429 PLRLPLQDVYKIGGIGTVPVGRVETGV 509
PLRLPLQDVYKIGGIGTVPVGRVETG+
Sbjct: 233 PLRLPLQDVYKIGGIGTVPVGRVETGM 259
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 136 bits (329), Expect = 2e-32
Identities = 64/84 (76%), Positives = 74/84 (88%)
Frame = +1
Query: 1 MITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPP 180
MITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P
Sbjct: 102 MITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPK 161
Query: 181 YSEPRFEEIKKEVSSYIKKIGYNP 252
YS+ R++EI KEVSSY+KK+GYNP
Sbjct: 162 YSKARYDEIIKEVSSYLKKVGYNP 185
Score = 120 bits (290), Expect = 8e-28
Identities = 54/92 (58%), Positives = 68/92 (73%)
Frame = +2
Query: 509 LKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDXXXXXXXXXXXXELRRGYVAGDSKN 688
+KPG +V FAP +TTEVKSVEMHHE+L EA+PGD +L+RGYVA +SK+
Sbjct: 260 IKPGMVVTFAPTGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGYVASNSKD 319
Query: 689 NPPKGAADFTAQVIVLNHPGQNLKRYTPVLDC 784
+P KGAA+FT+QVI++NHPGQ Y PVLDC
Sbjct: 320 DPAKGAANFTSQVIIMNHPGQIGNGYAPVLDC 351
Score = 107 bits (258), Expect = 6e-24
Identities = 54/87 (62%), Positives = 62/87 (71%)
Frame = +3
Query: 249 PSAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPTDK 428
P + FVPISG+ GDNM+E ST + W+KG L+EALD I P RP+DK
Sbjct: 185 PDKIPFVPISGFEGDNMIERSTNLDWYKG------------PTLLEALDQINEPKRPSDK 232
Query: 429 PLRLPLQDVYKIGGIGTVPVGRVETGV 509
PLRLPLQDVYKIGGIGTVPVGRVETG+
Sbjct: 233 PLRLPLQDVYKIGGIGTVPVGRVETGM 259
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 136 bits (329), Expect = 2e-32
Identities = 64/84 (76%), Positives = 74/84 (88%)
Frame = +1
Query: 1 MITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPP 180
MITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P
Sbjct: 102 MITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPK 161
Query: 181 YSEPRFEEIKKEVSSYIKKIGYNP 252
YS+ R++EI KEVSSY+KK+GYNP
Sbjct: 162 YSKARYDEIIKEVSSYLKKVGYNP 185
Score = 120 bits (290), Expect = 8e-28
Identities = 54/92 (58%), Positives = 68/92 (73%)
Frame = +2
Query: 509 LKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDXXXXXXXXXXXXELRRGYVAGDSKN 688
+KPG +V FAP +TTEVKSVEMHHE+L EA+PGD +L+RGYVA +SK+
Sbjct: 260 IKPGMVVTFAPTGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGYVASNSKD 319
Query: 689 NPPKGAADFTAQVIVLNHPGQNLKRYTPVLDC 784
+P KGAA+FT+QVI++NHPGQ Y PVLDC
Sbjct: 320 DPAKGAANFTSQVIIMNHPGQIGNGYAPVLDC 351
Score = 107 bits (258), Expect = 6e-24
Identities = 54/87 (62%), Positives = 62/87 (71%)
Frame = +3
Query: 249 PSAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPTDK 428
P + FVPISG+ GDNM+E ST + W+KG L+EALD I P RP+DK
Sbjct: 185 PDKIPFVPISGFEGDNMIERSTNLDWYKG------------PTLLEALDQINEPKRPSDK 232
Query: 429 PLRLPLQDVYKIGGIGTVPVGRVETGV 509
PLRLPLQDVYKIGGIGTVPVGRVETG+
Sbjct: 233 PLRLPLQDVYKIGGIGTVPVGRVETGM 259
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 136 bits (329), Expect = 2e-32
Identities = 64/84 (76%), Positives = 74/84 (88%)
Frame = +1
Query: 1 MITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPP 180
MITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P
Sbjct: 102 MITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPK 161
Query: 181 YSEPRFEEIKKEVSSYIKKIGYNP 252
YS+ R++EI KEVSSY+KK+GYNP
Sbjct: 162 YSKARYDEIIKEVSSYLKKVGYNP 185
Score = 120 bits (290), Expect = 8e-28
Identities = 54/92 (58%), Positives = 68/92 (73%)
Frame = +2
Query: 509 LKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDXXXXXXXXXXXXELRRGYVAGDSKN 688
+KPG +V FAP +TTEVKSVEMHHE+L EA+PGD +L+RGYVA +SK+
Sbjct: 260 IKPGMVVTFAPTGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGYVASNSKD 319
Query: 689 NPPKGAADFTAQVIVLNHPGQNLKRYTPVLDC 784
+P KGAA+FT+QVI++NHPGQ Y PVLDC
Sbjct: 320 DPAKGAANFTSQVIIMNHPGQIGNGYAPVLDC 351
Score = 107 bits (258), Expect = 6e-24
Identities = 54/87 (62%), Positives = 62/87 (71%)
Frame = +3
Query: 249 PSAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPTDK 428
P + FVPISG+ GDNM+E ST + W+KG L+EALD I P RP+DK
Sbjct: 185 PDKIPFVPISGFEGDNMIERSTNLDWYKG------------PTLLEALDQINEPKRPSDK 232
Query: 429 PLRLPLQDVYKIGGIGTVPVGRVETGV 509
PLRLPLQDVYKIGGIGTVPVGRVETG+
Sbjct: 233 PLRLPLQDVYKIGGIGTVPVGRVETGM 259
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 91.5 bits (217), Expect = 6e-19
Identities = 43/83 (51%), Positives = 59/83 (71%)
Frame = +1
Query: 1 MITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPP 180
MI+G SQAD VL+++A GEFE G + GQTREH LA TLGV +LIV VNKMD
Sbjct: 196 MISGASQADIGVLVISARKGEFETGYERGGQTREHVQLAKTLGVSKLIVVVNKMDDPTVN 255
Query: 181 YSEPRFEEIKKEVSSYIKKIGYN 249
+S+ R++EI++++ ++K GYN
Sbjct: 256 WSKERYDEIEQKMVPFLKASGYN 278
Score = 41.9 bits (94), Expect = 5e-04
Identities = 31/85 (36%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Frame = +3
Query: 258 VAFVPISGWHGDNMLEPSTK--MPWFKGWQVERKEGKADGKCLIEALDAILPPARPTDKP 431
V F+PISG G NM + + PW W G E LD+I P R + P
Sbjct: 283 VVFLPISGLMGKNMDQRMGQEICPW---W---------SGPSFFEVLDSIEIPPRDPNGP 330
Query: 432 LRLPLQDVYKIGGIGTVPVGRVETG 506
R+P+ D +K +GTV +G+VE+G
Sbjct: 331 FRMPIIDKFK--DMGTVVMGKVESG 353
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 74.1 bits (174), Expect = 9e-14
Identities = 38/79 (48%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Frame = +1
Query: 1 MITGTSQADCAVLIVAAGTGEFEAGISK-NGQTREHALLAFTLGVKQLIVGVNKMDSTEP 177
MI G +QAD A+L++ A G FEAG GQTREHA + GV+Q+IV +NKMD
Sbjct: 334 MIAGATQADAAILVIDASVGAFEAGFDNLKGQTREHARVLRGFGVEQVIVAINKMDIV-- 391
Query: 178 PYSEPRFEEIKKEVSSYIK 234
YS+ RF+ IK+ V S+++
Sbjct: 392 GYSKERFDLIKQHVGSFLQ 410
Score = 37.1 bits (82), Expect = 0.013
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 369 GKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPV-GRVETG 506
G CL++A+D++ P R KPL +P+ D + G V G++E G
Sbjct: 447 GPCLLDAVDSVKSPDRDVSKPLLMPICDAVRSTSQGQVSACGKLEAG 493
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 49.2 bits (112), Expect = 3e-06
Identities = 22/45 (48%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Frame = +3
Query: 378 LIEALDAILP-PARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGV 509
L++A+D +P P R DKP +P++DV+ I G GTV GR+E GV
Sbjct: 249 LMDAVDEYIPDPVRVLDKPFLMPIEDVFSIQGRGTVATGRIEQGV 293
Score = 42.3 bits (95), Expect = 3e-04
Identities = 27/78 (34%), Positives = 40/78 (51%)
Frame = +1
Query: 1 MITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPP 180
MITG +Q D +L+V+ G QT+EH LLA +GV L+ +NK+D + P
Sbjct: 147 MITGAAQMDGGILVVSGPDGPMP-------QTKEHILLARQVGVPSLVCFLNKVDVVDDP 199
Query: 181 YSEPRFEEIKKEVSSYIK 234
E +E+ S+ K
Sbjct: 200 ELLELVEMELRELLSFYK 217
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 43.6 bits (98), Expect = 2e-04
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = +1
Query: 1 MITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPP 180
MITG +Q D A+L+V+ G QT+EH LLA +GV ++V +NK D +
Sbjct: 159 MITGAAQMDGAILVVSGADGPMP-------QTKEHILLAKQVGVPDMVVFLNKEDQVDDA 211
Query: 181 YSEPRFE-EIKKEVSSY 228
E E+++ +SSY
Sbjct: 212 ELLELVELEVRELLSSY 228
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/44 (47%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Frame = +3
Query: 378 LIEALDAILP-PARPTDKPLRLPLQDVYKIGGIGTVPVGRVETG 506
L++A+D +P P R T+ P L ++DV+ I G GTV GRVE G
Sbjct: 269 LMDAVDDYIPIPQRQTELPFLLAVEDVFSITGRGTVATGRVERG 312
>At2g46830.1 68415.m05843 myb-related transcription factor (CCA1)
identical to myb-related transcription factor (CCA1)
GI:4090569 from [Arabidopsis thaliana]
Length = 608
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +3
Query: 351 KEGKADGKCLIEALDAILPPARPTDKP 431
KE +A G + +ALD +PP RP KP
Sbjct: 74 KEAEAKGVAMGQALDIAIPPPRPKRKP 100
>At1g61850.1 68414.m06979 patatin family protein similar to
membrane-associated calcium-independent phospholipase A2
gamma; IPLA2 gamma [Homo sapiens] GI:8453174; contains
Patatin domain PF01734, PF00514:
Armadillo/beta-catenin-like repeat
Length = 1265
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -1
Query: 601 SFLESFVVHLHRFDFSSDVGGGKDNNGTWFQTP-VSTLPTGTVPIPPILYT 452
SF + + L ++ G K + GT F TP S L TG++P P+L+T
Sbjct: 879 SFCSNNGIKLSSLHTTATPGCQKPSPGTAFPTPFTSPLITGSLPPSPLLFT 929
>At4g01910.1 68417.m00251 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 651
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 484 PSAELKLVFETRYHCCLCPRQHHY*SQIC 570
P+ L+L R+HC LC R+ +Y S C
Sbjct: 66 PNHTLELCSNLRFHCDLCGRRTNYLSYYC 94
>At3g24210.1 68416.m03038 ankyrin repeat family protein contains
ankyrin repeats, Pfam domain PF00023
Length = 607
Score = 29.1 bits (62), Expect = 3.5
Identities = 24/88 (27%), Positives = 42/88 (47%)
Frame = +1
Query: 160 MDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPALSLSCPFLDGTETTCWSLQPKCLGSRDG 339
M++ + P EE++KEV++ K + P + ++ L + T W Q K G
Sbjct: 234 MNALDGACGVPSEEEVRKEVAAMCKSNIFRPGIDVTQAVL--SPQTNWRRQEK--SEMVG 289
Query: 340 RWSVKKAKLTENASLKLSMPSCHLPAPL 423
W KAK+ E ++ +S+ S +P L
Sbjct: 290 PW---KAKVYEMNNVVVSVKSRKVPGSL 314
>At2g31060.1 68415.m03790 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain, PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 527
Score = 29.1 bits (62), Expect = 3.5
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 6/66 (9%)
Frame = +3
Query: 330 KGW--QVERKEGKADGKCLIEALDAIL----PPARPTDKPLRLPLQDVYKIGGIGTVPVG 491
+GW K+ D K + + LDA++ PP D+P + + + K +G + G
Sbjct: 82 EGWASSTYTKDPPVDAKNMADLLDAVVRHVQPPKANLDEPFLMLVSMMEKDFYLGRILTG 141
Query: 492 RVETGV 509
RV +GV
Sbjct: 142 RVTSGV 147
>At1g18900.2 68414.m02353 pentatricopeptide (PPR) repeat-containing
protein low similarity to 67kD chloroplastic RNA-binding
protein, P67 [Arabidopsis thaliana] GI:9755842; contains
Pfam profile PF01535: PPR repeat
Length = 860
Score = 29.1 bits (62), Expect = 3.5
Identities = 21/66 (31%), Positives = 30/66 (45%)
Frame = +1
Query: 274 FLDGTETTCWSLQPKCLGSRDGRWSVKKAKLTENASLKLSMPSCHLPAPLTSPCVFPCKT 453
FL+G+ T+ C+ S D K+ +L + A PS LP P C+ P +
Sbjct: 18 FLNGSRTSVTDGN-SCVYSDDENCVSKRQQLRKEAGQTEKRPSSILPKPSVVGCILPGEV 76
Query: 454 YTKSVV 471
TK VV
Sbjct: 77 -TKPVV 81
>At1g18900.1 68414.m02352 pentatricopeptide (PPR) repeat-containing
protein low similarity to 67kD chloroplastic RNA-binding
protein, P67 [Arabidopsis thaliana] GI:9755842; contains
Pfam profile PF01535: PPR repeat
Length = 860
Score = 29.1 bits (62), Expect = 3.5
Identities = 21/66 (31%), Positives = 30/66 (45%)
Frame = +1
Query: 274 FLDGTETTCWSLQPKCLGSRDGRWSVKKAKLTENASLKLSMPSCHLPAPLTSPCVFPCKT 453
FL+G+ T+ C+ S D K+ +L + A PS LP P C+ P +
Sbjct: 18 FLNGSRTSVTDGN-SCVYSDDENCVSKRQQLRKEAGQTEKRPSSILPKPSVVGCILPGEV 76
Query: 454 YTKSVV 471
TK VV
Sbjct: 77 -TKPVV 81
>At4g29900.1 68417.m04254 calcium-transporting ATPase, plasma
membrane-type, putative / Ca2+-ATPase, putative (ACA10)
identical to SP|Q9SZR1 Potential calcium-transporting
ATPase 10, plasma membrane-type (EC 3.6.3.8)
(Ca(2+)-ATPase isoform 10) {Arabidopsis thaliana};
similar to SP|Q9LF79 Calcium-transporting ATPase 8,
plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform
8) {Arabidopsis thaliana}
Length = 1069
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -2
Query: 606 GTASWRASWCISTDLTSVVMLAGAKTTMVPGFK 508
G + WR W S DLT ++++ A ++ G K
Sbjct: 178 GRSFWRFVWEASQDLTLIILIVAAVASLALGIK 210
>At1g47840.1 68414.m05325 hexokinase, putative similar to hexokinase
1 [Arabidopsis thaliana] Swiss-Prot:Q42525
Length = 493
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3
Query: 300 LEPSTKMPWFKGWQVERKEGKADGKCLIEALDA 398
++ T W KG++V EGK CL EA++A
Sbjct: 189 IDSGTLSKWTKGFKVSGMEGKNVVACLNEAMEA 221
>At5g19490.1 68418.m02322 repressor protein-related similar to
repressor protein [Oryza sativa] GI:18481624
Length = 236
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -1
Query: 481 TVPIPPILYTSCRGRRRGLSVGRAGGRMASRASMR 377
T + + +TSC RRG GR+ GR S S++
Sbjct: 92 TTQMHEVKHTSCGRGRRGRGRGRSSGRTGSGLSLK 126
>At4g18330.2 68417.m02719 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 471
Score = 27.9 bits (59), Expect = 8.0
Identities = 19/75 (25%), Positives = 35/75 (46%)
Frame = +1
Query: 1 MITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPP 180
M+ G + D A+L++AA QT EH + +K +I+ NK+D
Sbjct: 144 MLNGAAIVDGALLLIAANES------CPQPQTAEHLASVDMMRLKHIIILQNKIDLINEK 197
Query: 181 YSEPRFEEIKKEVSS 225
+ + E I+K +++
Sbjct: 198 AATEQHEAIQKFITN 212
>At4g18330.1 68417.m02718 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 284
Score = 27.9 bits (59), Expect = 8.0
Identities = 19/75 (25%), Positives = 35/75 (46%)
Frame = +1
Query: 1 MITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPP 180
M+ G + D A+L++AA QT EH + +K +I+ NK+D
Sbjct: 144 MLNGAAIVDGALLLIAANES------CPQPQTAEHLASVDMMRLKHIIILQNKIDLINEK 197
Query: 181 YSEPRFEEIKKEVSS 225
+ + E I+K +++
Sbjct: 198 AATEQHEAIQKFITN 212
>At4g13670.1 68417.m02125 peptidoglycan-binding domain-containing
protein similar to spore cortex-lytic enzyme prepeptide
(GI:1644192) [Bacillus cereus]; contains Pfam PF01471:
Putative peptidoglycan binding domain; contains Pfam
PF00684 : DnaJ central domain (4 repeats)
Length = 387
Score = 27.9 bits (59), Expect = 8.0
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -2
Query: 315 WLKAPTCCLRAIQKWARKRQRWV 247
WL+ +R Q+W R+ QRW+
Sbjct: 54 WLREEQRWIREEQRWIREEQRWI 76
>At3g11390.1 68416.m01387 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 710
Score = 27.9 bits (59), Expect = 8.0
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = +1
Query: 442 PCKTYTKSVVLVPCPSAELKLVFETRYHCCLCPRQHHY*SQICGDAPR 585
P YT+ + L PC + L V E Y C C H Q C D PR
Sbjct: 278 PLVFYTRPL-LTPCDACGLVNVLEPSYACFQCNYMVH---QSCIDLPR 321
>At2g42410.1 68415.m05249 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 214
Score = 27.9 bits (59), Expect = 8.0
Identities = 22/66 (33%), Positives = 25/66 (37%), Gaps = 6/66 (9%)
Frame = -1
Query: 538 GKDNNGT--WFQTPVSTLPTGTVPIPPILYTSCRGRRRGLSVGRAGGRM----ASRASMR 377
G+D NG G +P PP YT RR S GG M RA +R
Sbjct: 20 GEDGNGDNRVIMNHYKNYEAGLIPWPPKNYTCSFCRREFRSAQALGGHMNVHRRDRAKLR 79
Query: 376 HFPSAL 359
PS L
Sbjct: 80 QIPSWL 85
>At2g28000.1 68415.m03393 RuBisCO subunit binding-protein alpha
subunit, chloroplast / 60 kDa chaperonin alpha subunit /
CPN-60 alpha identical to SWISS-PROT:P21238- RuBisCO
subunit binding-protein alpha subunit, chloroplast
precursor (60 kDa chaperonin alpha subunit, CPN-60
alpha) [Arabidopsis thaliana]
Length = 586
Score = 27.9 bits (59), Expect = 8.0
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +2
Query: 650 ELRRGYVAGDSKNNPPKGAADF-TAQVIVLNHPGQNLKRYTPVLD 781
E+ RGY++ NP K A+F A+V++ + +K P+L+
Sbjct: 238 EIDRGYISPQFVTNPEKLLAEFENARVLITDQKITAIKDIIPILE 282
>At1g35550.1 68414.m04414 elongation factor Tu C-terminal
domain-containing protein similar to SP|P13905
Elongation factor 1-alpha (EF-1-alpha) {Arabidopsis
thaliana}; contains Pfam profile PF03143: Elongation
factor Tu C-terminal domain
Length = 104
Score = 27.9 bits (59), Expect = 8.0
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +2
Query: 734 LNHPGQNLKRYTPVLDC 784
+NH GQ YTPVLDC
Sbjct: 1 MNHLGQIKNGYTPVLDC 17
>At1g27440.1 68414.m03345 exostosin family protein contains Pfam
profile: PF03016 exostosin family
Length = 412
Score = 27.9 bits (59), Expect = 8.0
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
Frame = -1
Query: 580 VHLHRFDFSSDVGGGKDNNGTWFQTPV----STLPTGTVPIP 467
+ +HRF SS V + WF TP+ PTG +P+P
Sbjct: 77 IFMHRFLLSSPVRTRNPDEADWFYTPIYPTCDLTPTG-LPLP 117
>At1g26130.1 68414.m03190 haloacid dehalogenase-like hydrolase
family protein similar to Potential
phospholipid-transporting ATPase (EC 3.6.3.1) from Homo
sapiens [SP|Q9Y2Q0, SP|O43520], Mus musculus [SP|P98200,
SP|P70704], {Bos taurus} SP|Q29449; contains InterPro
accession IPR005834: Haloacid dehalogenase-like
hydrolase
Length = 1184
Score = 27.9 bits (59), Expect = 8.0
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +1
Query: 67 EAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSS 225
E+G +TR+H G++ LI+ ++D E R E K VS+
Sbjct: 629 ESGRKYEKETRDHVNEYADAGLRTLILAYRELDENEYEVFTERISEAKNSVSA 681
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,809,438
Number of Sequences: 28952
Number of extensions: 428755
Number of successful extensions: 1408
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1344
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1400
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1755792000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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