Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10434X
(308 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g06710.2 68418.m00759 homeobox-leucine zipper protein 14 (HAT... 28 1.1
At5g06710.1 68418.m00758 homeobox-leucine zipper protein 14 (HAT... 28 1.1
At5g60500.1 68418.m07587 undecaprenyl pyrophosphate synthetase f... 27 1.9
At5g11110.1 68418.m01297 sucrose-phosphate synthase, putative si... 27 1.9
At4g15820.1 68417.m02407 wound-responsive protein-related contai... 27 2.6
At1g72890.1 68414.m08431 disease resistance protein (TIR-NBS cla... 27 2.6
At1g46840.1 68414.m05218 F-box family protein contains F-box dom... 26 4.5
At1g34160.1 68414.m04237 pentatricopeptide (PPR) repeat-containi... 26 4.5
At5g20540.1 68418.m02439 expressed protein 26 5.9
At3g55130.1 68416.m06122 ABC transporter family protein breast c... 26 5.9
At3g10720.2 68416.m01291 pectinesterase, putative contains simil... 26 5.9
At2g42900.1 68415.m05314 expressed protein 26 5.9
At5g14130.1 68418.m01653 peroxidase, putative identical to perox... 25 7.8
At4g36740.1 68417.m05213 homeobox-leucine zipper family protein ... 25 7.8
At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase, pu... 25 7.8
At4g13550.1 68417.m02112 lipase class 3 family protein very low ... 25 7.8
At3g25120.1 68416.m03137 mitochondrial import inner membrane tra... 25 7.8
At2g14010.1 68415.m01557 hypothetical protein and genefinder 25 7.8
At1g08940.1 68414.m00995 phosphoglycerate/bisphosphoglycerate mu... 25 7.8
>At5g06710.2 68418.m00759 homeobox-leucine zipper protein 14 (HAT14)
/ HD-ZIP protein 14 contains similarity to homeodomain
leucine zipper protein
Length = 237
Score = 28.3 bits (60), Expect = 1.1
Identities = 20/59 (33%), Positives = 27/59 (45%)
Frame = +2
Query: 128 SSKASTPAVSVTSTPMKRLCFRLLKTSQLGGPRVLNRRYREVYSSQLKHTETQXKNPVP 304
+SK + P+VS TST K L F + GG +R + SS E + K P P
Sbjct: 21 NSKINNPSVSSTSTSEKDLGFCMALDVAFGG-------HRSLSSSSSPSVEDEKKKPAP 72
>At5g06710.1 68418.m00758 homeobox-leucine zipper protein 14 (HAT14)
/ HD-ZIP protein 14 contains similarity to homeodomain
leucine zipper protein
Length = 336
Score = 28.3 bits (60), Expect = 1.1
Identities = 20/59 (33%), Positives = 27/59 (45%)
Frame = +2
Query: 128 SSKASTPAVSVTSTPMKRLCFRLLKTSQLGGPRVLNRRYREVYSSQLKHTETQXKNPVP 304
+SK + P+VS TST K L F + GG +R + SS E + K P P
Sbjct: 21 NSKINNPSVSSTSTSEKDLGFCMALDVAFGG-------HRSLSSSSSPSVEDEKKKPAP 72
>At5g60500.1 68418.m07587 undecaprenyl pyrophosphate synthetase
family protein / UPP synthetase family protein contains
putative undecaprenyl diphosphate synthase domain
[PF01255]; similar to S. cerevisiae dehydrodolichyl
diphosphate synthetase (DEDOL-PP
synthase)(Rer2)[SP|P35196], a cis-prenyltransferase
Length = 271
Score = 27.5 bits (58), Expect = 1.9
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -3
Query: 192 RKHNLFIGVDVTETAGVEAFELTLQVCGDLG 100
+KHNL IG+D AG + + LQ C ++G
Sbjct: 50 KKHNL-IGLDAGHRAGFISVKYILQYCKEIG 79
>At5g11110.1 68418.m01297 sucrose-phosphate synthase, putative
similar to sucrose-phosphate synthase isoform 1, Citrus
unshiu, PIR:S72648
Length = 894
Score = 27.5 bits (58), Expect = 1.9
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +1
Query: 67 SVSDTPS--LKDLPKVATDLKSQLEGFNTSCLRDVDTN 174
S SD+PS L+D+ ++ +LK L+G + VDTN
Sbjct: 532 SDSDSPSDSLRDINDISLNLKLSLDGEKSGSNNGVDTN 569
>At4g15820.1 68417.m02407 wound-responsive protein-related contains
weak similarity to KED [Nicotiana tabacum]
gi|8096269|dbj|BAA95789
Length = 460
Score = 27.1 bits (57), Expect = 2.6
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Frame = +1
Query: 43 IY*FRMACSV---SDTPSLKDLPKVATDLKSQLEGFNTSCLRDVDTNEKI 183
I+ F+ C+V D+ + P+V++D EG N L DV+ NEKI
Sbjct: 92 IFAFQTVCAVLFLGDSTKSEKTPEVSSDS----EGNNLVLLEDVEMNEKI 137
>At1g72890.1 68414.m08431 disease resistance protein (TIR-NBS
class), putative domain signature TIR-NBS exists,
suggestive of a disease resistance protein.
Length = 438
Score = 27.1 bits (57), Expect = 2.6
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 207 RNWEDQESLIDGIEKFIRASL 269
+NWED L+DGI + I L
Sbjct: 182 KNWEDDSKLVDGITEKISTKL 202
>At1g46840.1 68414.m05218 F-box family protein contains F-box domain
Pfam:PF00646; contains 1 predicted transmembrane domain;
similar to Probable disease resistance RPP8-like protein
2 (Swiss-Prot:Q9MAG6) [Arabidopsis thaliana]
Length = 475
Score = 26.2 bits (55), Expect = 4.5
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3
Query: 207 RNWEDQESLIDGIEKFIRASLSTPRLKXRTRF 302
+ W D +E F+R+SLS PR+ RF
Sbjct: 56 KQWNSLLVSQDFVESFLRSSLSRPRIWFTFRF 87
>At1g34160.1 68414.m04237 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 558
Score = 26.2 bits (55), Expect = 4.5
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Frame = -3
Query: 156 ETAGVEAFELT----LQVCGDLGEVFQGGSVTHGAGHSESI 46
ET G+ E+T L C LG+V +G ++ HG + I
Sbjct: 202 ETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSNDNVI 242
>At5g20540.1 68418.m02439 expressed protein
Length = 384
Score = 25.8 bits (54), Expect = 5.9
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = +1
Query: 70 VSDTPSLKDLPKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDV 207
++ TP + + T+ S +S RD D +E++ + +A DV
Sbjct: 282 LNSTPKVSSISVAKTETSSIDASIRSSSSRDADRSEEMSVSNASDV 327
>At3g55130.1 68416.m06122 ABC transporter family protein breast
cancer resistance protein 1 BCRP1, Mus musculus,
EMBL:NP_036050
Length = 725
Score = 25.8 bits (54), Expect = 5.9
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +1
Query: 82 PSLKDLPKVATDLKSQLEGFNTSCLRDVDTNEK 180
P +++ + A DL +LEG N VD NEK
Sbjct: 324 PEKENISEFALDLVRELEGSNEGTKALVDFNEK 356
>At3g10720.2 68416.m01291 pectinesterase, putative contains
similarity to pectinesterase from Vitis vinifera
GI:15081598, Prunus persica SP|Q43062; contains Pfam
profile PF01095 pectinesterase
Length = 619
Score = 25.8 bits (54), Expect = 5.9
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +2
Query: 29 LPHQKYIDSEWPAP*VTLPP*KTSPRSPQT*RVSSKASTPAVSVTSTPMKRLCFRLL 199
LP + ++S + P + PP P P + S++ +P+++ STP +LC +L
Sbjct: 43 LPFEPPVESPFFPP--SQPPIFVPPSQPPS-LPPSQSQSPSLACKSTPYPKLCRTIL 96
>At2g42900.1 68415.m05314 expressed protein
Length = 276
Score = 25.8 bits (54), Expect = 5.9
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -3
Query: 129 LTLQVCGDLGEVFQGGSVTHGAGHSESI 46
+T+Q CG+ + SVT GA H E +
Sbjct: 112 VTVQFCGNSSDRVDRFSVTSGASHGEYV 139
>At5g14130.1 68418.m01653 peroxidase, putative identical to
peroxidase ATP20a [Arabidopsis thaliana]
gi|1546694|emb|CAA67338
Length = 330
Score = 25.4 bits (53), Expect = 7.8
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = -3
Query: 228 TLGPPSCDVFSRRKHNLFIGVDVTETAGVEAFELTLQVCGD 106
T+G C+ F+ R HN + V T + +Q C D
Sbjct: 200 TIGSSHCNRFANRLHNFSTFMPVDPTMDPVYAQQLIQACSD 240
>At4g36740.1 68417.m05213 homeobox-leucine zipper family protein
similar to CRHB7 (GP:3868841) {Ceratopteris richardii}
and to homeotic protein VAHOX1 (PIR:T07734)
[Lycopersicon esculentum]
Length = 217
Score = 25.4 bits (53), Expect = 7.8
Identities = 9/16 (56%), Positives = 12/16 (75%), Gaps = 1/16 (6%)
Frame = +2
Query: 17 IFYPLPHQKYID-SEW 61
+FYP+P YID +EW
Sbjct: 197 LFYPVPENSYIDEAEW 212
>At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 224
Score = 25.4 bits (53), Expect = 7.8
Identities = 12/21 (57%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
Frame = -3
Query: 102 GEVFQGGSVTHGAG-HSESIY 43
G V QGG + HG G S+SIY
Sbjct: 109 GFVIQGGDIIHGDGKSSDSIY 129
>At4g13550.1 68417.m02112 lipase class 3 family protein very low
similarity to diacylglycerol lipase [Aspergillus oryzae]
GI:1772352; contains Pfam profiles PF01764: Lipase
(class 3), PF00168: C2 domain
Length = 785
Score = 25.4 bits (53), Expect = 7.8
Identities = 11/45 (24%), Positives = 26/45 (57%)
Frame = +2
Query: 137 ASTPAVSVTSTPMKRLCFRLLKTSQLGGPRVLNRRYREVYSSQLK 271
A+ A+ ++S+ + + + G PRV N+++ E+Y+ ++K
Sbjct: 611 ATLLALELSSSQLAKRGAITVTMYNFGSPRVGNKQFAEIYNQKVK 655
>At3g25120.1 68416.m03137 mitochondrial import inner membrane
translocase subunit Tim17/Tim22/Tim23 family protein
contains Pfam PF02466: Mitochondrial import inner
membrane translocase subunit Tim17
Length = 189
Score = 25.4 bits (53), Expect = 7.8
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = +2
Query: 104 RSPQT*RVSSKASTPAVSVTSTPMKRLCFRLLKTSQLGGPRVLNRRYR 247
+SP+ + TP V TP KR+ L +GG L ++R
Sbjct: 7 KSPEQTNQALSPPTPIVQENGTPTKRVLITSLLAGVIGGGAGLVSKHR 54
>At2g14010.1 68415.m01557 hypothetical protein and genefinder
Length = 833
Score = 25.4 bits (53), Expect = 7.8
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 1 VAECTNLLSPSSSKIY*FRMACSVSDTPSLKD 96
+++ NL PS+ I R A +SD P L D
Sbjct: 571 ISDAANLSKPSADDIVSERYAERISDPPGLND 602
>At1g08940.1 68414.m00995 phosphoglycerate/bisphosphoglycerate
mutase family protein contains Pfam profile PF00300:
phosphoglycerate mutase family
Length = 281
Score = 25.4 bits (53), Expect = 7.8
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 109 ATDLKSQLEGFNTSCLRDVDTNEKIVLPSAE 201
A D+ ++ F S RDVD N V PS+E
Sbjct: 144 AADVYDRVSSFLESMWRDVDMNRHQVDPSSE 174
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,097,052
Number of Sequences: 28952
Number of extensions: 139436
Number of successful extensions: 455
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 439
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 455
length of database: 12,070,560
effective HSP length: 70
effective length of database: 10,043,920
effective search space used: 321405440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -