Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0232.Seq
(399 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g38770.1 68417.m05490 proline-rich family protein (PRP4) simi... 33 0.070
At5g64430.1 68418.m08093 octicosapeptide/Phox/Bem1p (PB1) domain... 30 0.49
At1g62970.1 68414.m07110 DNAJ heat shock N-terminal domain-conta... 28 2.0
At5g24710.1 68418.m02919 WD-40 repeat family protein contains 3 ... 28 2.6
At5g17700.1 68418.m02074 MATE efflux family protein similar to r... 28 2.6
At3g03620.1 68416.m00365 MATE efflux family protein similar to r... 28 2.6
At2g17430.1 68415.m02011 seven transmembrane MLO family protein ... 28 2.6
At1g21860.1 68414.m02736 multi-copper oxidase type I family prot... 28 2.6
At3g32280.1 68416.m04116 hypothetical protein 27 3.5
At1g75080.2 68414.m08720 brassinosteroid signalling positive reg... 27 3.5
At1g75080.1 68414.m08719 brassinosteroid signalling positive reg... 27 3.5
At1g33610.1 68414.m04160 leucine-rich repeat family protein cont... 27 3.5
At4g00160.1 68417.m00016 F-box family protein contains F-box dom... 27 4.6
At1g28320.1 68414.m03475 protease-related similar to Protease de... 27 4.6
At1g11070.1 68414.m01268 hydroxyproline-rich glycoprotein family... 27 4.6
At5g21160.1 68418.m02528 La domain-containing protein / proline-... 27 6.1
At3g43330.1 68416.m04580 hypothetical protein putative proteins ... 27 6.1
At3g25020.1 68416.m03127 disease resistance family protein conta... 27 6.1
At3g25010.1 68416.m03126 disease resistance family protein conta... 27 6.1
At3g24982.1 68416.m03125 leucine-rich repeat family protein, 5' ... 27 6.1
At4g20980.1 68417.m03037 eukaryotic translation initiation facto... 26 8.0
At3g28030.1 68416.m03499 UV hypersensitive protein (UVH3) / DNA-... 26 8.0
>At4g38770.1 68417.m05490 proline-rich family protein (PRP4) similar
to proline-rich protein [Arabidopsis thaliana]
gi|6782442|gb|AAF28388; contains proline-rich extensin
domains, INTERPRO:IPR002965
Length = 448
Score = 33.1 bits (72), Expect = 0.070
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +1
Query: 238 KTHIDAQKPIQRPNPWNNQFPKPLP*KNCLPTTIPRAHRFGFPCFKPPPE 387
K + P+ +P P + P P+P K C P H P +KPPP+
Sbjct: 219 KKEVPPPVPVYKPPP-KVELPPPIPKKPCPPKPPKIEHPPPVPVYKPPPK 267
>At5g64430.1 68418.m08093 octicosapeptide/Phox/Bem1p (PB1)
domain-containing protein contains Pfam profile PF00564:
PB1 domain
Length = 513
Score = 30.3 bits (65), Expect = 0.49
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +3
Query: 255 PKAHPKTQPLEQSIPQAPSMKKLFANNHSKGTPF 356
P P Q + Q+ PQAP M + NH+ G F
Sbjct: 294 PAPPPPQQTIPQTNPQAPPMTTFWQGNHNPGVVF 327
>At1g62970.1 68414.m07110 DNAJ heat shock N-terminal
domain-containing protein low similarity to AHM1
[Triticum aestivum] GI:6691467; contains Pfam profile
PF00226: DnaJ domain
Length = 797
Score = 28.3 bits (60), Expect = 2.0
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = +1
Query: 262 PIQRPNPWNNQFPKPLP*KNCLPTTI--PRAHRFGFPCFKPP 381
P+ +P P +N FP P N P ++ P + FP +PP
Sbjct: 466 PVSQPQPASNPFPVSQPRPNSQPFSMSQPSSTARPFPASQPP 507
>At5g24710.1 68418.m02919 WD-40 repeat family protein contains 3 Pfam
PF00400: WD domain, G-beta repeats;
Length = 1327
Score = 27.9 bits (59), Expect = 2.6
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -1
Query: 198 RDTGIWE*SVCEPHVNGAPTMKNLGVVVQRSLE 100
+DTG+ +V H +G PT+KNL ++L+
Sbjct: 1053 QDTGMLAEAVLHAHAHGRPTLKNLVQAWNKTLQ 1085
>At5g17700.1 68418.m02074 MATE efflux family protein similar to
ripening regulated protein DDTFR18 [Lycopersicon
esculentum] GI:12231296; contains Pfam profile PF01554:
Uncharacterized membrane protein family
Length = 497
Score = 27.9 bits (59), Expect = 2.6
Identities = 13/55 (23%), Positives = 27/55 (49%), Gaps = 5/55 (9%)
Frame = +1
Query: 85 LRVKSFQTSLDDYPQIFHRWCPIN-VGLANRLF----PDSRISLTWGFQVIRAHW 234
L + S+ ++ ++ +F WCP G + F P ++S++ GF + +W
Sbjct: 220 LNISSWSVAIAEFVYVFGGWCPHTWTGFSTAAFLDLIPMLKLSISSGFMLCLEYW 274
>At3g03620.1 68416.m00365 MATE efflux family protein similar to
ripening regulated protein DDTFR18 [Lycopersicon
esculentum] GI:12231296
Length = 500
Score = 27.9 bits (59), Expect = 2.6
Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 5/55 (9%)
Frame = +1
Query: 85 LRVKSFQTSLDDYPQIFHRWCPI-----NVGLANRLFPDSRISLTWGFQVIRAHW 234
L V S+ L ++ IF WCP ++ L P ++S++ GF + +W
Sbjct: 223 LNVGSWAMVLAEFVYIFGGWCPFTWTGFSIAAFVDLIPMLKLSISSGFMICLEYW 277
>At2g17430.1 68415.m02011 seven transmembrane MLO family protein /
MLO-like protein 7 (MLO7) identical to membrane protein
Mlo7 [Arabidopsis thaliana] gi|14091584|gb|AAK53800;
similar to MLO protein SWISS-PROT:P93766,
NCBI_gi:1877221 [Hordeum vulgare][Barley]
Length = 542
Score = 27.9 bits (59), Expect = 2.6
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +2
Query: 56 RTRLLAKSNYFVLNHSKLLWTTTPKFFIVG 145
R RL +++ FV H+ WTTTP FF VG
Sbjct: 213 RLRLTHETS-FVREHTSF-WTTTPFFFYVG 240
>At1g21860.1 68414.m02736 multi-copper oxidase type I family protein
similar to pollen-specific BP10 protein
[SP|Q00624][Brassica napus]; contains Pfam profile:
PF00394 Multicopper oxidase
Length = 538
Score = 27.9 bits (59), Expect = 2.6
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +1
Query: 181 PDSRISLTWGFQVIRAHWAKTHIDAQKPIQRPNP 282
PD I L+W F RA +T++ A P RPNP
Sbjct: 306 PDGPIKLSWSFNQARA--IRTNLTASGP--RPNP 335
>At3g32280.1 68416.m04116 hypothetical protein
Length = 474
Score = 27.5 bits (58), Expect = 3.5
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = -3
Query: 346 PLEWLLANSFFMEGAWGIDCSKGWVFGWAFGHQC 245
P + ++N+F GA +C W++ GH C
Sbjct: 231 PKDEPISNTFEKSGATLTNCEHSWIWKQGLGHTC 264
>At1g75080.2 68414.m08720 brassinosteroid signalling positive
regulator (BZR1) identical to to BZR1 protein
[Arabidopsis thaliana] gi|20270971|gb|AAM18490
Length = 336
Score = 27.5 bits (58), Expect = 3.5
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +3
Query: 186 FPYLANVGLPSYSCSLGKNTH*CPKAHPKTQPLEQSIPQAPSMKKL 323
FP+L N G+PS SL + ++ CP P + P ++ P+ + +
Sbjct: 153 FPFLRNGGIPSSLPSL-RISNSCPVTPPVSSPTSKNPKPLPNWESI 197
>At1g75080.1 68414.m08719 brassinosteroid signalling positive
regulator (BZR1) identical to to BZR1 protein
[Arabidopsis thaliana] gi|20270971|gb|AAM18490
Length = 336
Score = 27.5 bits (58), Expect = 3.5
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +3
Query: 186 FPYLANVGLPSYSCSLGKNTH*CPKAHPKTQPLEQSIPQAPSMKKL 323
FP+L N G+PS SL + ++ CP P + P ++ P+ + +
Sbjct: 153 FPFLRNGGIPSSLPSL-RISNSCPVTPPVSSPTSKNPKPLPNWESI 197
>At1g33610.1 68414.m04160 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611
Length = 907
Score = 27.5 bits (58), Expect = 3.5
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +3
Query: 108 FFGRLPPNFSSLVP 149
FFGRLPP+ +SL P
Sbjct: 663 FFGRLPPSIASLAP 676
>At4g00160.1 68417.m00016 F-box family protein contains F-box domain
Pfam:PF00646
Length = 453
Score = 27.1 bits (57), Expect = 4.6
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +3
Query: 291 SIPQAPSMKKLFANNHSKGTPFWLSVFQTP 380
+I + PS+K+L N+ G FW V P
Sbjct: 211 TIDEVPSLKRLTINDDHDGQEFWGYVINAP 240
>At1g28320.1 68414.m03475 protease-related similar to Protease degS
[Precursor] (SP:P44947) [Haemophilus influenzae];
similar to DegP protease precursor (GI:2565436)
[Arabidopsis thaliana]
Length = 709
Score = 27.1 bits (57), Expect = 4.6
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +3
Query: 255 PKAHPKTQPLEQSIPQAPSMKKLFANNHSKGTPFWLSVFQT 377
P PKT EQS+P P + K N +KG+ F + +T
Sbjct: 653 PSLSPKT---EQSLPNLPKLLKDGNNKQTKGSQFAKFIAET 690
>At1g11070.1 68414.m01268 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 554
Score = 27.1 bits (57), Expect = 4.6
Identities = 15/53 (28%), Positives = 21/53 (39%)
Frame = +2
Query: 230 IGQKHTLMPKSPSKDPTLGTINSPSPFHEKTVCQQPFQGHTVLAFRVSNPPRN 388
+ K + P+S + P KTV P + H + VSN PRN
Sbjct: 56 VEMKKKVSPRSTKTSNDRSESLAKQPIRPKTVLSPPSKVHGDFSISVSNLPRN 108
>At5g21160.1 68418.m02528 La domain-containing protein /
proline-rich family protein contains proline-rich
extensin domains, INTERPRO:IPR002965, PF05383: La domain
Length = 826
Score = 26.6 bits (56), Expect = 6.1
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1
Query: 268 QRPNPWNNQFPKPLP*KNCLPTTIP 342
Q+P P N P P P +PT+IP
Sbjct: 56 QQPRPKNPPAPAPAPPSKNIPTSIP 80
>At3g43330.1 68416.m04580 hypothetical protein putative proteins -
Arabidopsis thaliana
Length = 489
Score = 26.6 bits (56), Expect = 6.1
Identities = 16/33 (48%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = +3
Query: 168 KQIIPRFPYLANV--GLPSYSCSLGKNTH*CPK 260
K +IP P A V G P YSC GK H PK
Sbjct: 139 KPVIPPNPKSAYVDEGDPVYSCDKGKVDHCLPK 171
>At3g25020.1 68416.m03127 disease resistance family protein contains
leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; similar to Hcr2-0B [Lycopersicon
esculentum] gi|3894387|gb|AAC78593
Length = 890
Score = 26.6 bits (56), Expect = 6.1
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -1
Query: 387 FRGGFETRKAKTVCPWNGCW 328
F+ F+TR PWNG W
Sbjct: 48 FKNEFDTRACNHSDPWNGVW 67
>At3g25010.1 68416.m03126 disease resistance family protein contains
leucine rich-repeat (LRR) domains (23 copies)
Pfam:PF00560, INTERPRO:IPR001611; similar to Hcr2-5D
[Lycopersicon esculentum] gi|3894393|gb|AAC78596
Length = 881
Score = 26.6 bits (56), Expect = 6.1
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = -1
Query: 387 FRGGFETRKAKTVCPWNGCW 328
F+ F TR PWNG W
Sbjct: 48 FKNEFNTRACNHSSPWNGVW 67
>At3g24982.1 68416.m03125 leucine-rich repeat family protein, 5'
fragment contains leucine rich-repeat domains
Pfam:PF00560, INTERPRO:IPR001611 (19 copies); contains
similarity to GB:AAD13301 from [Lycopersicon esculentum]
Length = 681
Score = 26.6 bits (56), Expect = 6.1
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -1
Query: 387 FRGGFETRKAKTVCPWNGCW 328
F+ F+TR PWNG W
Sbjct: 79 FKNEFDTRACNHSDPWNGVW 98
>At4g20980.1 68417.m03037 eukaryotic translation initiation factor 3
subunit 7, putative / eIF-3 zeta, putative / eIF3d,
putative similar to initiation factor 3d [Arabidopsis
thaliana] GI:12407755, SP|O15371 Eukaryotic translation
initiation factor 3 subunit 7 (eIF-3 zeta) (eIF3 p66)
(eIF3d) {Homo sapiens}; contains Pfam profile PF05091:
Eukaryotic translation initiation factor 3 subunit 7
(eIF-3)
Length = 591
Score = 26.2 bits (55), Expect = 8.0
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = +1
Query: 4 FLKFHRSPYATLSRIGKEDKATCEV*LLRVKSFQTSLDDYPQIFHRWCPINVGLANRLFP 183
F K S + R+ KEDKAT + + +L P+ + W + + N+LF
Sbjct: 247 FFKVTTSDDPVIRRLAKEDKAT----VFATDAILAALMCAPRSVYSWDIVIQRVGNKLFF 302
Query: 184 DSR 192
D R
Sbjct: 303 DKR 305
>At3g28030.1 68416.m03499 UV hypersensitive protein (UVH3) /
DNA-repair protein, putative identical to UV
hypersensitive protein [Arabidopsis thaliana]
gi|13649704|gb|AAK37472; similar to Swiss-Prot:P14629
DNA-repair protein complementing XP-G cells homolog
(Xeroderma pigmentosum group G complementing protein
homolog) [Xenopus laevis]
Length = 1479
Score = 26.2 bits (55), Expect = 8.0
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +2
Query: 158 WGSQTDYSQIPVSR*RGASKLFVLIGQKHTLMPKSPS 268
W S +D+ ++PV + SKL + +H +PK S
Sbjct: 566 WASDSDWEEVPVEQNTSVSKLEANLSNQH--IPKDIS 600
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,168,594
Number of Sequences: 28952
Number of extensions: 273828
Number of successful extensions: 730
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 730
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 575830496
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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