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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0161
         (313 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g60245.1 68416.m06733 60S ribosomal protein L37a (RPL37aC)         119   4e-28
At3g10950.1 68416.m01320 60S ribosomal protein L37a (RPL37aB) si...   112   4e-26
At2g32770.3 68415.m04011 purple acid phosphatase (PAP13) identic...    30   0.28 
At2g32770.2 68415.m04012 purple acid phosphatase (PAP13) identic...    30   0.28 
At2g32770.1 68415.m04010 purple acid phosphatase (PAP13) identic...    30   0.28 
At4g28730.1 68417.m04109 glutaredoxin family protein contains gl...    27   2.0  
At4g38600.2 68417.m05463 HECT-domain-containing protein / ubiqui...    27   3.5  
At4g38600.1 68417.m05464 HECT-domain-containing protein / ubiqui...    27   3.5  
At2g02620.1 68415.m00201 DC1 domain-containing protein / PHD fin...    27   3.5  
At1g23740.1 68414.m02996 oxidoreductase, zinc-binding dehydrogen...    27   3.5  
At5g58930.1 68418.m07382 expressed protein contains Pfam PF05340...    25   8.1  
At3g18290.1 68416.m02326 zinc finger protein-related weak alignm...    25   8.1  

>At3g60245.1 68416.m06733 60S ribosomal protein L37a (RPL37aC)
          Length = 92

 Score =  119 bits (287), Expect = 4e-28
 Identities = 51/76 (67%), Positives = 60/76 (78%)
 Frame = +2

Query: 26  MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRC 205
           MAKRTKKVGI GKYGTRYGAS+RK +KKMEV+QH+KY C FCGK  +KR  VGIW CK C
Sbjct: 1   MAKRTKKVGIVGKYGTRYGASIRKQIKKMEVSQHSKYFCEFCGKYGVKRKAVGIWGCKDC 60

Query: 206 KRTVAGGAWVFSTTAA 253
            +  AGGA+  +T +A
Sbjct: 61  GKVKAGGAYTMNTASA 76


>At3g10950.1 68416.m01320 60S ribosomal protein L37a (RPL37aB)
           similar to putative 60S ribosomal protein L37a
           GB:AAD28753 [Gossypium hirsutum]
          Length = 92

 Score =  112 bits (270), Expect = 4e-26
 Identities = 49/76 (64%), Positives = 57/76 (75%)
 Frame = +2

Query: 26  MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRC 205
           M KRTKK  I GKYGTRYGASLRK +KKMEV+QH KY C FCGK ++KR  VGIW CK C
Sbjct: 1   MTKRTKKARIVGKYGTRYGASLRKQIKKMEVSQHNKYFCEFCGKYSVKRKVVGIWGCKDC 60

Query: 206 KRTVAGGAWVFSTTAA 253
            +  AGGA+  +T +A
Sbjct: 61  GKVKAGGAYTMNTASA 76


>At2g32770.3 68415.m04011 purple acid phosphatase (PAP13) identical
           to purple acid phosphatase (PAP13) [Arabidopsis
           thaliana] GI:20257489; contains Pfam profile PF00149:
           Ser/Thr protein phosphatase
          Length = 545

 Score = 30.3 bits (65), Expect = 0.28
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +1

Query: 10  GEVYQNGQTYQKGWNYW 60
           G  Y +G+TYQ  W+YW
Sbjct: 261 GSCYSSGETYQPRWDYW 277


>At2g32770.2 68415.m04012 purple acid phosphatase (PAP13) identical
           to purple acid phosphatase (PAP13) [Arabidopsis
           thaliana] GI:20257489; contains Pfam profile PF00149:
           Ser/Thr protein phosphatase
          Length = 428

 Score = 30.3 bits (65), Expect = 0.28
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +1

Query: 10  GEVYQNGQTYQKGWNYW 60
           G  Y +G+TYQ  W+YW
Sbjct: 180 GSCYSSGETYQPRWDYW 196


>At2g32770.1 68415.m04010 purple acid phosphatase (PAP13) identical
           to purple acid phosphatase (PAP13) [Arabidopsis
           thaliana] GI:20257489; contains Pfam profile PF00149:
           Ser/Thr protein phosphatase
          Length = 516

 Score = 30.3 bits (65), Expect = 0.28
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +1

Query: 10  GEVYQNGQTYQKGWNYW 60
           G  Y +G+TYQ  W+YW
Sbjct: 261 GSCYSSGETYQPRWDYW 277


>At4g28730.1 68417.m04109 glutaredoxin family protein contains
           glutaredoxin domain, Pfam:PF00462
          Length = 174

 Score = 27.5 bits (58), Expect = 2.0
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = +2

Query: 56  TGKYGTRYGASLRKMVKKMEVTQHAKYTCSFC 151
           +  +G+R   S+RK V +  V  ++K  CS+C
Sbjct: 62  SSSFGSRMEESIRKTVTENTVVIYSKTWCSYC 93


>At4g38600.2 68417.m05463 HECT-domain-containing protein /
           ubiquitin-transferase family protein similar to
           SP|Q14669Thyroid receptor interacting protein 12
           (TRIP12) {Homo sapiens}; contains Pfam profile PF00632:
           HECT-domain (ubiquitin-transferase)
          Length = 1794

 Score = 26.6 bits (56), Expect = 3.5
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = -2

Query: 231 QAPPATVLLHRLQDQMPTQERF 166
           + PP TVL+ +LQ+ + + ERF
Sbjct: 802 KVPPMTVLIQKLQNALSSLERF 823


>At4g38600.1 68417.m05464 HECT-domain-containing protein /
           ubiquitin-transferase family protein similar to
           SP|Q14669Thyroid receptor interacting protein 12
           (TRIP12) {Homo sapiens}; contains Pfam profile PF00632:
           HECT-domain (ubiquitin-transferase)
          Length = 1888

 Score = 26.6 bits (56), Expect = 3.5
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = -2

Query: 231 QAPPATVLLHRLQDQMPTQERF 166
           + PP TVL+ +LQ+ + + ERF
Sbjct: 875 KVPPMTVLIQKLQNALSSLERF 896


>At2g02620.1 68415.m00201 DC1 domain-containing protein / PHD finger
           protein-related contains Pfam profiles PF03107: DC1
           domain, weak hit to PF00628: PHD-finger
          Length = 513

 Score = 26.6 bits (56), Expect = 3.5
 Identities = 10/28 (35%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
 Frame = +2

Query: 179 VGIWSCKRCKRTVAG--GAWVFSTTAAY 256
           +GIWSC  C++ + G  GA++ +  + Y
Sbjct: 163 LGIWSCGVCRKEIDGDYGAYICNICSGY 190


>At1g23740.1 68414.m02996 oxidoreductase, zinc-binding dehydrogenase
           family protein contains Pfam profile PF00107:
           oxidoreductase, zinc-binding dehydrogenase family
          Length = 386

 Score = 26.6 bits (56), Expect = 3.5
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +1

Query: 220 RRSLGILHYCCLSCRSAVRRLREVK 294
           RR   +LHYC L+ +S V ++  V+
Sbjct: 16  RRETPLLHYCSLTTKSPVYQINRVR 40


>At5g58930.1 68418.m07382 expressed protein contains Pfam PF05340:
           Protein of unknown function (DUF740)
          Length = 521

 Score = 25.4 bits (53), Expect = 8.1
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = +1

Query: 22  QNGQTYQKGWNYW 60
           ++G+ + KGWN+W
Sbjct: 347 KSGKNWSKGWNFW 359


>At3g18290.1 68416.m02326 zinc finger protein-related weak alignment
           to Pfam profiles: PF00097 Zinc finger, C3HC4 type (RING
           finger) (2 copies)
          Length = 1254

 Score = 25.4 bits (53), Expect = 8.1
 Identities = 12/43 (27%), Positives = 20/43 (46%)
 Frame = -2

Query: 240 ENTQAPPATVLLHRLQDQMPTQERFIASLPQNEQVYFACWVTS 112
           E  Q  P  +   + ++Q     RF+ S+P N    F  W++S
Sbjct: 177 EQKQVFPLLIEKFKYEEQAYIVWRFLCSIPVNMLAVFLPWISS 219


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,413,497
Number of Sequences: 28952
Number of extensions: 151315
Number of successful extensions: 435
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 426
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 435
length of database: 12,070,560
effective HSP length: 70
effective length of database: 10,043,920
effective search space used: 331449360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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