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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0148
         (548 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g68200.1 68414.m07791 zinc finger (CCCH-type) family protein ...    71   4e-13
At1g66810.1 68414.m07594 zinc finger (CCCH-type) family protein ...    71   4e-13
At2g35430.1 68415.m04342 zinc finger (CCCH-type) family protein ...    44   2e-05
At1g32360.1 68414.m03989 zinc finger (CCCH-type) family protein ...    44   7e-05
At5g06770.1 68418.m00765 KH domain-containing protein / zinc fin...    42   3e-04
At3g19360.1 68416.m02456 zinc finger (CCCH-type) family protein ...    40   0.001
At3g12130.1 68416.m01509 KH domain-containing protein / zinc fin...    39   0.002
At1g03790.1 68414.m00360 zinc finger (CCCH-type) family protein ...    37   0.010
At5g56900.2 68418.m07101 CwfJ-like family protein / zinc finger ...    34   0.054
At5g56900.1 68418.m07100 CwfJ-like family protein / zinc finger ...    34   0.054
At5g44260.1 68418.m05416 zinc finger (CCCH-type) family protein ...    34   0.072
At5g06420.2 68418.m00719 zinc finger (CCCH-type/C3HC4-type RING ...    34   0.072
At5g06420.1 68418.m00718 zinc finger (CCCH-type/C3HC4-type RING ...    34   0.072
At3g21810.1 68416.m02750 zinc finger (CCCH-type) family protein ...    34   0.072
At1g01350.1 68414.m00050 zinc finger (CCCH-type/C3HC4-type RING ...    34   0.072
At1g04990.2 68414.m00500 zinc finger (CCCH-type) family protein ...    33   0.17 
At1g04990.1 68414.m00499 zinc finger (CCCH-type) family protein ...    33   0.17 
At2g28450.1 68415.m03456 zinc finger (CCCH-type) family protein ...    32   0.29 
At1g75340.1 68414.m08751 zinc finger (CCCH-type) family protein ...    31   0.38 
At5g58620.1 68418.m07346 zinc finger (CCCH-type) family protein ...    31   0.51 
At5g12850.1 68418.m01475 zinc finger (CCCH-type) family protein ...    31   0.51 
At3g48440.1 68416.m05288 zinc finger (CCCH-type) family protein ...    30   1.2  
At4g29190.1 68417.m04176 zinc finger (CCCH-type) family protein ...    29   1.5  
At3g55980.1 68416.m06220 zinc finger (CCCH-type) family protein ...    29   1.5  
At3g06410.1 68416.m00739 zinc finger (CCCH-type) family protein ...    29   1.5  
At2g40140.1 68415.m04937 zinc finger (CCCH-type) family protein ...    29   1.5  
At2g32930.1 68415.m04037 zinc finger (CCCH-type) family protein ...    29   2.0  
At2g05160.1 68415.m00543 zinc finger (CCCH-type) family protein ...    29   2.0  
At5g57790.1 68418.m08529 expressed protein                             29   2.7  
At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1 pro...    29   2.7  
At1g30460.1 68414.m03723 zinc finger (CCCH-type) family protein ...    29   2.7  
At5g07500.1 68418.m00858 zinc finger (CCCH-type) family protein ...    28   3.6  
At3g52980.1 68416.m05840 RNA recognition motif (RRM)-containing ...    28   3.6  
At3g45840.1 68416.m04961 DC1 domain-containing protein contains ...    28   4.7  
At3g12680.1 68416.m01582 floral homeotic protein (HUA1) identica...    28   4.7  
At5g63260.1 68418.m07940 zinc finger (CCCH-type) family protein ...    27   6.2  
At5g18550.1 68418.m02193 zinc finger (CCCH-type) family protein ...    27   8.3  
At5g07060.1 68418.m00799 zinc finger (CCCH-type) family protein ...    27   8.3  
At4g16820.1 68417.m02539 lipase class 3 family protein similar t...    27   8.3  
At3g18950.1 68416.m02405 transducin family protein / WD-40 repea...    27   8.3  

>At1g68200.1 68414.m07791 zinc finger (CCCH-type) family protein
           contains Pfam domain, PF00642: Zinc finger
           C-x8-C-x5-C-x3-H type (and similar)
          Length = 308

 Score = 71.3 bits (167), Expect = 4e-13
 Identities = 28/50 (56%), Positives = 36/50 (72%)
 Frame = +1

Query: 256 CQFAHGVRELRNLQRHPKYKTELCRTFHSVGFCPYGPRCHFVHNAEEARR 405
           CQFAHG++ELR + RHP+YKTE+CR   +   CPYG RCHF H+  E  +
Sbjct: 243 CQFAHGIKELRPVIRHPRYKTEVCRMVLAGDNCPYGHRCHFRHSLSEQEK 292



 Score = 41.1 bits (92), Expect = 5e-04
 Identities = 15/30 (50%), Positives = 17/30 (56%)
 Frame = +1

Query: 313 KTELCRTFHSVGFCPYGPRCHFVHNAEEAR 402
           KTELC  +   G CPYG  C F H  +E R
Sbjct: 224 KTELCNKWQETGTCPYGDHCQFAHGIKELR 253



 Score = 29.5 bits (63), Expect = 1.5
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +2

Query: 200 KTXLCRPFEEAGVCKYGDN 256
           KT LC  ++E G C YGD+
Sbjct: 224 KTELCNKWQETGTCPYGDH 242


>At1g66810.1 68414.m07594 zinc finger (CCCH-type) family protein
           contains Pfam domain, PF00642: Zinc finger
           C-x8-C-x5-C-x3-H type (and similar)
          Length = 310

 Score = 71.3 bits (167), Expect = 4e-13
 Identities = 28/50 (56%), Positives = 35/50 (70%)
 Frame = +1

Query: 256 CQFAHGVRELRNLQRHPKYKTELCRTFHSVGFCPYGPRCHFVHNAEEARR 405
           CQFAHG+ ELR + RHP+YKTE+CR   +   CPYG RCHF H+  +  R
Sbjct: 253 CQFAHGIDELRPVIRHPRYKTEVCRMMVTGAMCPYGHRCHFRHSLTDQER 302



 Score = 39.5 bits (88), Expect = 0.001
 Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
 Frame = +1

Query: 271 GVRELRNLQ--RHPKYKTELCRTFHSVGFCPYGPRCHFVHNAEEAR 402
           G RE   L+  R    KTELC  +   G C YG  C F H  +E R
Sbjct: 218 GEREALELEVYRQGMMKTELCNKWQETGACCYGDNCQFAHGIDELR 263



 Score = 30.7 bits (66), Expect = 0.67
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +2

Query: 200 KTXLCRPFEEAGVCKYGDN 256
           KT LC  ++E G C YGDN
Sbjct: 234 KTELCNKWQETGACCYGDN 252


>At2g35430.1 68415.m04342 zinc finger (CCCH-type) family protein
           contains Pfam domain, PF00642: Zinc finger
           C-x8-C-x5-C-x3-H type (and similar)
          Length = 252

 Score = 44.4 bits (100), Expect(2) = 2e-05
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = +1

Query: 298 RHPKYKTELCRTFHSVGFCPYGPRCHFVHNAEE 396
           + P +KT +C  + + G+CP+G  CHF H   E
Sbjct: 140 KSPNWKTRICNKWQTTGYCPFGSHCHFAHGPSE 172



 Score = 40.3 bits (90), Expect = 8e-04
 Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = +1

Query: 310 YKTELCRTFHSVGFCPYGPR-CHFVHNAEEARRREPSSP 423
           +KT+LC  F + G CPY    CHF H+AEE R   P  P
Sbjct: 72  FKTKLCFKFRA-GTCPYSASSCHFAHSAEELRLPPPPPP 109



 Score = 20.6 bits (41), Expect(2) = 2e-05
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +1

Query: 256 CQFAHGVRELR 288
           C FAH   ELR
Sbjct: 92  CHFAHSAEELR 102


>At1g32360.1 68414.m03989 zinc finger (CCCH-type) family protein
           contains Pfam domain, PF00642: Zinc finger
           C-x8-C-x5-C-x3-H type (and similar)
          Length = 384

 Score = 44.0 bits (99), Expect = 7e-05
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = +1

Query: 310 YKTELCRTFHSVGFCPYGPRCHFVHNAEEARR 405
           +KT +C  +   G+CP+G +CHF H A E  R
Sbjct: 261 WKTRICNKWEITGYCPFGAKCHFAHGAAELHR 292



 Score = 39.9 bits (89), Expect = 0.001
 Identities = 17/36 (47%), Positives = 22/36 (61%)
 Frame = +1

Query: 310 YKTELCRTFHSVGFCPYGPRCHFVHNAEEARRREPS 417
           +KT+LC  F + G CPY   C+F H  EE RR  P+
Sbjct: 92  FKTKLCCKFRA-GTCPYITNCNFAHTVEELRRPPPN 126



 Score = 33.9 bits (74), Expect = 0.072
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = +1

Query: 310 YKTELCRTFHSVGFCPYGPRCHFVHNAEEARRRE 411
           +K   C+ F++   CPYG  C F+H+ E +R RE
Sbjct: 173 FKGRHCKKFYTEEGCPYGESCTFLHD-EASRNRE 205


>At5g06770.1 68418.m00765 KH domain-containing protein / zinc finger
           (CCCH type) family protein contains Pfam domains
           PF00013: KH domain and PF00642: Zinc finger
           C-x8-C-x5-C-x3-H type (and similar)
          Length = 240

 Score = 41.9 bits (94), Expect = 3e-04
 Identities = 19/37 (51%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
 Frame = +1

Query: 301 HP--KYKTELCRTFHSVGFCPYGPRCHFVHNAEEARR 405
           HP   YKT++C  + S G C YG RCHF H   E RR
Sbjct: 201 HPGSNYKTKICDRY-SKGNCTYGDRCHFAHGESELRR 236



 Score = 35.1 bits (77), Expect = 0.031
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = +1

Query: 262 FAHGVRELRNLQRHPKYKTELCRTFHSVGFCPYGPRCHFVH 384
           F    +E+ ++      K++ C  F S   CP+G  CHF+H
Sbjct: 21  FKRSKQEMESISTGLGSKSKPCTKFFSTSGCPFGDNCHFLH 61


>At3g19360.1 68416.m02456 zinc finger (CCCH-type) family protein
           contains Pfam domain, PF00642: Zinc finger
           C-x8-C-x5-C-x3-H type (and similar)
          Length = 386

 Score = 39.9 bits (89), Expect = 0.001
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = +1

Query: 310 YKTELCRTFHSVGFCPYGPRCHFVHNAEE 396
           +KT LC  F   G CP+G +CHF H   E
Sbjct: 270 WKTRLCMKFDITGQCPFGDKCHFAHGQAE 298



 Score = 33.5 bits (73), Expect = 0.095
 Identities = 15/35 (42%), Positives = 22/35 (62%)
 Frame = +1

Query: 313 KTELCRTFHSVGFCPYGPRCHFVHNAEEARRREPS 417
           + +LCR F     CPYG RC+F+H  + ++ RE S
Sbjct: 185 RMKLCRKFCFGEECPYGDRCNFIHE-DLSKFREDS 218



 Score = 31.9 bits (69), Expect = 0.29
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +1

Query: 310 YKTELCRTFHSVGFCPYGPRCHFVHNAEEARR 405
           YKT +C  F + G C  G  C+F H  E+ R+
Sbjct: 105 YKTRMCAKFRA-GTCRNGELCNFAHGIEDLRQ 135



 Score = 30.7 bits (66), Expect = 0.67
 Identities = 27/104 (25%), Positives = 47/104 (45%), Gaps = 10/104 (9%)
 Frame = +2

Query: 197 YKTXLCRPFEEAGVCKYGDNANLL--TASANYAIFSVILNTRRSCVALSIRLASVLMDRV 370
           +KT LC  F+  G C +GD  +     A  + ++  V      +  +++ +      +  
Sbjct: 270 WKTRLCMKFDITGQCPFGDKCHFAHGQAELHNSVGRVEGEAMNAVASVNKQAVVPANEAF 329

Query: 371 AISCITQRKQDA----ENHRRQE--VHW--HRLIGRIYGVYISD 478
           A+  ITQ   D+    E  RR++  + W   + I RIYG +I D
Sbjct: 330 AMKPITQVTADSSGLNEEGRRKKCLLKWSDSKKINRIYGDWIDD 373


>At3g12130.1 68416.m01509 KH domain-containing protein / zinc finger
           (CCCH type) family protein
          Length = 248

 Score = 39.1 bits (87), Expect = 0.002
 Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
 Frame = +1

Query: 301 HP--KYKTELCRTFHSVGFCPYGPRCHFVHNAEEARR 405
           HP   +KT++C  F S G C +G RCHF H   E R+
Sbjct: 209 HPGSNFKTKICERF-SKGNCTFGDRCHFAHGEAELRK 244



 Score = 33.5 bits (73), Expect = 0.095
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +1

Query: 313 KTELCRTFHSVGFCPYGPRCHFVH 384
           K++ C  F S   CP+G  CHF+H
Sbjct: 38  KSKPCTKFFSTSGCPFGENCHFLH 61


>At1g03790.1 68414.m00360 zinc finger (CCCH-type) family protein
           contains Pfam domain, PF00642: Zinc finger
           C-x8-C-x5-C-x3-H type (and similar)
          Length = 393

 Score = 36.7 bits (81), Expect = 0.010
 Identities = 19/51 (37%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
 Frame = +1

Query: 247 WG*CQFAH-GVRELRNLQRHPKYKTELCRTFHSVGFCPYGPRCHFVHNAEE 396
           W  C FAH G +  R   R  +Y  E+C  F   G C  G  C F H   E
Sbjct: 101 WTDCPFAHPGEKARRRDPRRFQYSGEVCPEFRRGGDCSRGDDCEFAHGVFE 151


>At5g56900.2 68418.m07101 CwfJ-like family protein / zinc finger
           (CCCH-type) family protein contains Pfam domain,
           PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and
           similar), PF04677: Protein similar to CwfJ C-terminus 1,
           PF04676: Protein similar to CwfJ C-terminus 2
          Length = 593

 Score = 34.3 bits (75), Expect = 0.054
 Identities = 14/25 (56%), Positives = 15/25 (60%)
 Frame = +1

Query: 319 ELCRTFHSVGFCPYGPRCHFVHNAE 393
           +LC  F   G CP G  CHF HNAE
Sbjct: 304 KLCFKFVCSGSCPRGEDCHFQHNAE 328


>At5g56900.1 68418.m07100 CwfJ-like family protein / zinc finger
           (CCCH-type) family protein contains Pfam domain,
           PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and
           similar), PF04677: Protein similar to CwfJ C-terminus 1,
           PF04676: Protein similar to CwfJ C-terminus 2
          Length = 404

 Score = 34.3 bits (75), Expect = 0.054
 Identities = 14/25 (56%), Positives = 15/25 (60%)
 Frame = +1

Query: 319 ELCRTFHSVGFCPYGPRCHFVHNAE 393
           +LC  F   G CP G  CHF HNAE
Sbjct: 115 KLCFKFVCSGSCPRGEDCHFQHNAE 139


>At5g44260.1 68418.m05416 zinc finger (CCCH-type) family protein
           contains Pfam domain, PF00642: Zinc finger
           C-x8-C-x5-C-x3-H type (and similar)
          Length = 381

 Score = 33.9 bits (74), Expect = 0.072
 Identities = 18/51 (35%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
 Frame = +1

Query: 247 WG*CQFAH-GVRELRNLQRHPKYKTELCRTFHSVGFCPYGPRCHFVHNAEE 396
           W  C F+H G +  R   R   Y  E+C  F   G C  G  C F H   E
Sbjct: 79  WTDCPFSHPGEKARRRDPRRFHYTGEVCPEFSRHGDCSRGDECGFAHGVFE 129


>At5g06420.2 68418.m00719 zinc finger (CCCH-type/C3HC4-type RING
           finger) family protein contains Pfam domains PF00642:
           Zinc finger C-x8-C-x5-C-x3-H type (and similar) and
           PF00097: Zinc finger, C3HC4 type (RING finger)
          Length = 378

 Score = 33.9 bits (74), Expect = 0.072
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = +1

Query: 310 YKTELCRTFHSVGFCPYGPRCHFVHN 387
           Y+ ++C+ +   G+C YG  C F+H+
Sbjct: 236 YQPDICKDYKETGYCGYGDSCKFLHD 261



 Score = 30.7 bits (66), Expect = 0.67
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +2

Query: 197 YKTXLCRPFEEAGVCKYGDNANLLTASANY 286
           Y+  +C+ ++E G C YGD+   L    +Y
Sbjct: 236 YQPDICKDYKETGYCGYGDSCKFLHDRGDY 265


>At5g06420.1 68418.m00718 zinc finger (CCCH-type/C3HC4-type RING
           finger) family protein contains Pfam domains PF00642:
           Zinc finger C-x8-C-x5-C-x3-H type (and similar) and
           PF00097: Zinc finger, C3HC4 type (RING finger)
          Length = 378

 Score = 33.9 bits (74), Expect = 0.072
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = +1

Query: 310 YKTELCRTFHSVGFCPYGPRCHFVHN 387
           Y+ ++C+ +   G+C YG  C F+H+
Sbjct: 236 YQPDICKDYKETGYCGYGDSCKFLHD 261



 Score = 30.7 bits (66), Expect = 0.67
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +2

Query: 197 YKTXLCRPFEEAGVCKYGDNANLLTASANY 286
           Y+  +C+ ++E G C YGD+   L    +Y
Sbjct: 236 YQPDICKDYKETGYCGYGDSCKFLHDRGDY 265


>At3g21810.1 68416.m02750 zinc finger (CCCH-type) family protein
           contains Pfam domain, PF00642: Zinc finger
           C-x8-C-x5-C-x3-H type (and similar)
          Length = 437

 Score = 33.9 bits (74), Expect = 0.072
 Identities = 17/37 (45%), Positives = 19/37 (51%)
 Frame = +1

Query: 310 YKTELCRTFHSVGFCPYGPRCHFVHNAEEARRREPSS 420
           YKT+LC  F+  G C   P C F H   E RR   SS
Sbjct: 7   YKTKLCILFNKTGDCS-RPNCTFAHGNAELRRPGESS 42


>At1g01350.1 68414.m00050 zinc finger (CCCH-type/C3HC4-type RING
           finger) family protein similar to SP|O15541 Zinc finger
           protein 183 {Homo sapiens}; contains Pfam profiles
           PF04396: Protein of unknown function, DUF537, PF00097:
           Zinc finger, C3HC4 type (RING finger), PF00642: Zinc
           finger C-x8-C-x5-C-x3-H type (and similar)
          Length = 586

 Score = 33.9 bits (74), Expect = 0.072
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = +1

Query: 310 YKTELCRTFHSVGFCPYGPRCHFVHN 387
           Y+ ++C+ +   G+C YG  C F+H+
Sbjct: 201 YQPDICKDYKETGYCGYGDSCKFLHD 226



 Score = 30.7 bits (66), Expect = 0.67
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +2

Query: 197 YKTXLCRPFEEAGVCKYGDNANLLTASANY 286
           Y+  +C+ ++E G C YGD+   L    +Y
Sbjct: 201 YQPDICKDYKETGYCGYGDSCKFLHDRGDY 230


>At1g04990.2 68414.m00500 zinc finger (CCCH-type) family protein
           contains Pfam domain, PF00642: Zinc finger
           C-x8-C-x5-C-x3-H type (and similar)
          Length = 404

 Score = 32.7 bits (71), Expect = 0.17
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = +1

Query: 325 CRTFHSVGFCPYGPRCHFVH 384
           C  F S GFC +GP C F H
Sbjct: 313 CGNFRSYGFCKFGPNCKFDH 332



 Score = 27.9 bits (59), Expect = 4.7
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +1

Query: 325 CRTFHSVGFCPYGPRCHFVHNAEEARRREPS 417
           CR F + G C YG  C + H      +  PS
Sbjct: 267 CRFFMNTGTCKYGDDCKYSHPGVRISQPPPS 297



 Score = 27.1 bits (57), Expect = 8.3
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = +1

Query: 325 CRTFHSVGFCPYGPRCHFVH 384
           C  F   G C YGP C + H
Sbjct: 96  CEYFLKTGACKYGPTCKYHH 115


>At1g04990.1 68414.m00499 zinc finger (CCCH-type) family protein
           contains Pfam domain, PF00642: Zinc finger
           C-x8-C-x5-C-x3-H type (and similar)
          Length = 404

 Score = 32.7 bits (71), Expect = 0.17
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = +1

Query: 325 CRTFHSVGFCPYGPRCHFVH 384
           C  F S GFC +GP C F H
Sbjct: 313 CGNFRSYGFCKFGPNCKFDH 332



 Score = 27.9 bits (59), Expect = 4.7
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +1

Query: 325 CRTFHSVGFCPYGPRCHFVHNAEEARRREPS 417
           CR F + G C YG  C + H      +  PS
Sbjct: 267 CRFFMNTGTCKYGDDCKYSHPGVRISQPPPS 297



 Score = 27.1 bits (57), Expect = 8.3
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = +1

Query: 325 CRTFHSVGFCPYGPRCHFVH 384
           C  F   G C YGP C + H
Sbjct: 96  CEYFLKTGACKYGPTCKYHH 115


>At2g28450.1 68415.m03456 zinc finger (CCCH-type) family protein
           contains Pfam domain, PF00642: Zinc finger
           C-x8-C-x5-C-x3-H type (and similar)
          Length = 809

 Score = 31.9 bits (69), Expect = 0.29
 Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 5/52 (9%)
 Frame = +1

Query: 304 PKYKTELCRTFHSVGFCPYGPRCHFVHNAEEARRR-----EPSSPGGSLASS 444
           P +KT LC  F     C +G  C + H   E R +     +P+S  G  A +
Sbjct: 78  PWWKTSLCSYFRREASCSHGNECKYAHGEAELRMKPDNTWDPTSERGKKAKA 129


>At1g75340.1 68414.m08751 zinc finger (CCCH-type) family protein
           weak similarity to Nucleoporin NUP42 (Nuclear pore
           protein NUP42) (Swiss-Prot:P49686) [Saccharomyces
           cerevisiae]; contains Pfam profile  PF00642: Zinc finger
           C-x8-C-x5-C-x3-H type (and similar)
          Length = 435

 Score = 31.5 bits (68), Expect = 0.38
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +1

Query: 313 KTELCRTFHSVGFCPYGPRCHFVHNAEEARRREP 414
           + ELCR F   G C YG  C F+H  ++A+   P
Sbjct: 2   RKELCRNFQR-GSCRYGENCRFLH-PQQAKPNNP 33


>At5g58620.1 68418.m07346 zinc finger (CCCH-type) family protein
           contains Pfam domain, PF00642: Zinc finger
           C-x8-C-x5-C-x3-H type (and similar) and Pfam domain,
           PF00023: Ankyrin repeat
          Length = 607

 Score = 31.1 bits (67), Expect = 0.51
 Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
 Frame = +1

Query: 256 CQFAHGVRELRNLQRHP-KYKTELCRTFHSVGFCPYGPRCHFVHNAEEARRREPSSPGG 429
           C++AHG+ E      HP +Y+T LC+   +   C     C F H  EE R   PS+  G
Sbjct: 269 CEYAHGIFEC---WLHPAQYRTRLCKDETN---CSRRV-CFFAHKPEELRPLYPSTGSG 320


>At5g12850.1 68418.m01475 zinc finger (CCCH-type) family protein
           contains Pfam domain, PF00642: Zinc finger
           C-x8-C-x5-C-x3-H type (and similar) and Pfam domain,
           PF00023: Ankyrin repeat
          Length = 706

 Score = 31.1 bits (67), Expect = 0.51
 Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = +1

Query: 256 CQFAHGVRELRNLQRHP-KYKTELCRTFHSVGFCPYGPRCHFVHNAEEARRREPSSPGG 429
           C++AHGV E      HP +Y+T LC+     G       C F H  EE R   PS+  G
Sbjct: 317 CEYAHGVFEC---WLHPAQYRTRLCKD----GMGCNRRVCFFAHANEELRPLYPSTGSG 368


>At3g48440.1 68416.m05288 zinc finger (CCCH-type) family protein
           contains Pfam domain, PF00642: Zinc finger
           C-x8-C-x5-C-x3-H type (and similar)
          Length = 448

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 14/51 (27%), Positives = 22/51 (43%), Gaps = 4/51 (7%)
 Frame = +1

Query: 322 LCRTFHSVGFCPYGPRCHFVHNAEEARRREPS----SPGGSLASSHRADLW 462
           +C  +   G C +GP C F H+ +     E S     P    A+ + +D W
Sbjct: 397 ICTYYSRYGICKFGPACRFDHSVQPPYSTESSQAIVEPPQVSANGNESDGW 447


>At4g29190.1 68417.m04176 zinc finger (CCCH-type) family protein
           contains Pfam domain, PF00642: Zinc finger
           C-x8-C-x5-C-x3-H type (and similar)
          Length = 356

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
 Frame = +1

Query: 226 RSGGL*IWG*CQFAHGVRELRNLQRHP-KYKTELCRTFHSVGFCPYGPRCHFVHNAEEAR 402
           R GG      C+FAHGV E      HP +Y+T+ C+     G C     C F H+ ++ R
Sbjct: 129 RKGGCKKGDSCEFAHGVFE---CWLHPARYRTQPCK---DGGNC-LRKICFFAHSPDQLR 181

Query: 403 RREPSSP 423
                SP
Sbjct: 182 FLHTRSP 188


>At3g55980.1 68416.m06220 zinc finger (CCCH-type) family protein
           contains Pfam domain, PF00642: Zinc finger
           C-x8-C-x5-C-x3-H type (and similar) and Pfam domain,
           PF00023: Ankyrin repeat
          Length = 580

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 17/52 (32%), Positives = 19/52 (36%), Gaps = 1/52 (1%)
 Frame = +1

Query: 247 WG*CQFAH-GVRELRNLQRHPKYKTELCRTFHSVGFCPYGPRCHFVHNAEEA 399
           W  C F H G    R   R   Y    C  F   G CP G  C + H   E+
Sbjct: 230 WTECAFVHPGENARRRDPRKYPYTCVPCPEFRK-GSCPKGDSCEYAHGVFES 280


>At3g06410.1 68416.m00739 zinc finger (CCCH-type) family protein
           contains Pfam domain, PF00642: Zinc finger
           C-x8-C-x5-C-x3-H type (and similar)
          Length = 437

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +1

Query: 325 CRTFHSVGFCPYGPRCHFVHNAEEARRREPSS 420
           C  F   G C +GP C F H+   +    PS+
Sbjct: 334 CTHFAQHGICKFGPACKFDHSMSSSLSYSPSA 365


>At2g40140.1 68415.m04937 zinc finger (CCCH-type) family protein
           contains Pfam domain, PF00642: Zinc finger
           C-x8-C-x5-C-x3-H type (and similar) and Pfam domain,
           PF00023: Ankyrin repeat
          Length = 597

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 17/52 (32%), Positives = 19/52 (36%), Gaps = 1/52 (1%)
 Frame = +1

Query: 247 WG*CQFAH-GVRELRNLQRHPKYKTELCRTFHSVGFCPYGPRCHFVHNAEEA 399
           W  C F H G    R   R   Y    C  F   G CP G  C + H   E+
Sbjct: 233 WTECPFVHPGENARRRDPRKYPYTCVPCPEFRK-GSCPKGDSCEYAHGVFES 283


>At2g32930.1 68415.m04037 zinc finger (CCCH-type) family protein
           contains Pfam domain, PF00642: Zinc finger
           C-x8-C-x5-C-x3-H type (and similar)
          Length = 453

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +1

Query: 325 CRTFHSVGFCPYGPRCHFVHNAEEARRREPS 417
           CR F + G C YG  C + H  E   +  P+
Sbjct: 267 CRFFMNTGTCKYGDDCKYSHPKERLLQSPPT 297



 Score = 28.3 bits (60), Expect = 3.6
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +1

Query: 325 CRTFHSVGFCPYGPRCHFVHN 387
           C  F + GFC +G  C F H+
Sbjct: 313 CGNFKAYGFCKFGANCKFDHS 333


>At2g05160.1 68415.m00543 zinc finger (CCCH-type) family protein /
           RNA recognition motif (RRM)-containing protein contains
           InterPro entry IPR000504: RNA-binding region RNP-1 (RNA
           recognition motif) (RRM)
          Length = 536

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = +1

Query: 274 VRELRNLQRHPKYKTELCRTFHSVGFCPYGPRCHFVH 384
           +R  R     P++  ++C  F+  GFC +G  C + H
Sbjct: 145 LRTSRRSPSLPEFPVKICHYFNK-GFCKHGNNCRYFH 180


>At5g57790.1 68418.m08529 expressed protein
          Length = 205

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 12/43 (27%), Positives = 22/43 (51%)
 Frame = +3

Query: 147 SNAPPVNRLLRHQPQVATRPXSADRLKKRGFVNMGIMPICSRR 275
           SN PP+   +   P   ++P + D +   GF ++GI  +  +R
Sbjct: 43  SNFPPLTTEIDTPPPSNSKPSTVDDISMEGFESLGIEKLIKKR 85


>At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1
           protein (ZFWD1) identical to zfwd1 protein (GI:12057164)
           [Arabidopsis thaliana]
          Length = 430

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +1

Query: 313 KTELCRTFHSVGFCPYGPRCHFVH 384
           KTE    F   G CPYG +C ++H
Sbjct: 103 KTEKLCKFWVDGNCPYGDKCRYLH 126


>At1g30460.1 68414.m03723 zinc finger (CCCH-type) family protein /
           YT521-B-like family protein low similarity to cleavage
           and polyadenylation specificity factor 30 kDa subunit
           [Bos taurus] GI:2327052; contains Pfam profiles PF00642:
           Zinc finger C-x8-C-x5-C-x3-H type (and similar),
           PF04146: YT521-B-like family; supporting cDNA
           gi|24415581|gb|AY140901.1|
          Length = 678

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +1

Query: 277 RELRNLQRHPKYKTELCRTFHSVGFCPYGPRCHFVH 384
           RE   + +H     + C  +  +GFCP GP C + H
Sbjct: 104 REQDCVYKHTNEDIKECNMY-KLGFCPNGPDCRYRH 138


>At5g07500.1 68418.m00858 zinc finger (CCCH-type) family protein
           contains Pfam domain, PF00642: Zinc finger
           C-x8-C-x5-C-x3-H type (and similar)
          Length = 245

 Score = 28.3 bits (60), Expect = 3.6
 Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
 Frame = +1

Query: 256 CQFAHGVRELRNLQRHP-KYKTELCRTFHSVGFCPYGPRCHFVHNAEEARRRE 411
           C+FAHGV E      HP +Y+T  C    + G       C F H  E+ R+ E
Sbjct: 112 CEFAHGVFE---YWLHPARYRTRAC----NAGNLCQRKVCFFAHAPEQLRQSE 157


>At3g52980.1 68416.m05840 RNA recognition motif (RRM)-containing
           protein predicted proteins, Arabidopsis thaliana
          Length = 381

 Score = 28.3 bits (60), Expect = 3.6
 Identities = 22/70 (31%), Positives = 34/70 (48%)
 Frame = +1

Query: 304 PKYKTELCRTFHSVGFCPYGPRCHFVHNAEEARRREPSSPGGSLASSHRADLWRLY*RRV 483
           P++  ++C  F+  GFC +G  CH   + EE       SP GSL    R  +  L  RR 
Sbjct: 163 PEFPLKICHYFNK-GFCKHGNNCHNNLSDEE----HVVSP-GSLEKLEREIIELLKSRRG 216

Query: 484 AIATLRRIPI 513
           A  ++  +P+
Sbjct: 217 APISIAFLPM 226


>At3g45840.1 68416.m04961 DC1 domain-containing protein contains
           Pfam profile PF03107: DC1 domain
          Length = 633

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = +1

Query: 265 AHGVRELRNLQRHPKYKTELCRTFHSVGFCPYGPRCHFV-HNAEEARRREPSSP 423
           +H    LR  +R P+Y+ ++C   H +   PY   C     N + +  R+P  P
Sbjct: 67  SHPEHPLRLTERPPRYECDIC-GIHHLADVPYFYHCSICDFNVDTSCARKPPPP 119


>At3g12680.1 68416.m01582 floral homeotic protein (HUA1) identical
           to floral homeotic protein HUA1 [Arabidopsis thaliana]
           gi|16797661|gb|AAK01470
          Length = 524

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 14/45 (31%), Positives = 20/45 (44%)
 Frame = +1

Query: 325 CRTFHSVGFCPYGPRCHFVHNAEEARRREPSSPGGSLASSHRADL 459
           C  +   G C YG  C + H    A   + +    SL SS+ A+L
Sbjct: 346 CPFYLKTGSCKYGATCRYNHPERTAFIPQAAGVNYSLVSSNTANL 390


>At5g63260.1 68418.m07940 zinc finger (CCCH-type) family protein
           contains Pfam domain, PF00642: Zinc finger
           C-x8-C-x5-C-x3-H type (and similar)
          Length = 435

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +1

Query: 322 LCRTFHSVGFCPYGPRCHFVHN 387
           +C  +   G C +GP C F H+
Sbjct: 385 MCTHYSRYGICKFGPACRFDHS 406


>At5g18550.1 68418.m02193 zinc finger (CCCH-type) family protein
           contains Pfam domain, PF00642: Zinc finger
           C-x8-C-x5-C-x3-H type (and similar)
          Length = 456

 Score = 27.1 bits (57), Expect = 8.3
 Identities = 11/33 (33%), Positives = 14/33 (42%)
 Frame = +1

Query: 325 CRTFHSVGFCPYGPRCHFVHNAEEARRREPSSP 423
           C  F   G C +GP C F H+   +      SP
Sbjct: 342 CTHFAQHGICKFGPACKFDHSLGSSSLSYSPSP 374


>At5g07060.1 68418.m00799 zinc finger (CCCH-type) family protein
           contains Pfam domain, PF00642: Zinc finger
           C-x8-C-x5-C-x3-H type (and similar)
          Length = 363

 Score = 27.1 bits (57), Expect = 8.3
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = +1

Query: 286 RNLQRHPKYKTELCRTFHSVGFCPYGPRCHFVHNAEE 396
           R    + K + ++C +F+++G C  G  C F H   E
Sbjct: 147 RRTPSYEKNRPKIC-SFYTIGQCKRGAECSFRHEMPE 182


>At4g16820.1 68417.m02539 lipase class 3 family protein similar to
           DEFECTIVE IN ANTHER DEHISCENCE1 [Arabidopsis thaliana]
           GI:16215706; contains Pfam profile PF01764: Lipase
          Length = 517

 Score = 27.1 bits (57), Expect = 8.3
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = +2

Query: 407 ENHRRQEVHWHRLIGRIYGVYISDGSRSPRFAAFP 511
           EN RR+ V +   +   Y  + SD   SPR  A P
Sbjct: 149 ENLRRELVRYGEFVQAAYHAFHSDPEGSPRHVALP 183


>At3g18950.1 68416.m02405 transducin family protein / WD-40 repeat
           family protein contains 7 WD-40 repeats (PF00400);
           similar to En/Spm-like transposon protein GI:2739374
           from [Arabidopsis thaliana]; no characterized homologs
          Length = 473

 Score = 27.1 bits (57), Expect = 8.3
 Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = +2

Query: 350 SVLMDRVA-ISCITQRKQDAENHRRQ 424
           SVLMD V  + C+T  + D E HR +
Sbjct: 418 SVLMDHVGPVKCLTAVEDDGEGHREK 443


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,306,476
Number of Sequences: 28952
Number of extensions: 243745
Number of successful extensions: 859
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 729
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 856
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1033331880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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