Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0128
(698 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g45330.1 68416.m04894 lectin protein kinase family protein co... 39 0.004
At2g16890.2 68415.m01944 UDP-glucoronosyl/UDP-glucosyl transfera... 33 0.14
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 31 0.56
At5g14920.1 68418.m01750 gibberellin-regulated family protein si... 29 2.2
At5g43560.2 68418.m05326 meprin and TRAF homology domain-contain... 29 3.0
At5g43560.1 68418.m05325 meprin and TRAF homology domain-contain... 29 3.0
At3g20310.1 68416.m02573 ethylene-responsive element-binding fam... 29 3.0
At2g17550.1 68415.m02031 expressed protein 29 3.0
At3g51290.1 68416.m05614 proline-rich family protein 29 3.9
At5g66640.1 68418.m08399 LIM domain-containing protein-related c... 28 5.2
At2g39220.1 68415.m04817 patatin family protein similar to patat... 28 5.2
At1g04150.1 68414.m00405 C2 domain-containing protein contains I... 28 5.2
At3g45220.1 68416.m04880 serpin, putative / serine protease inhi... 28 6.8
At3g12200.1 68416.m01521 protein kinase family protein contains ... 28 6.8
At3g56150.1 68416.m06241 eukaryotic translation initiation facto... 27 9.0
At3g23530.1 68416.m02961 cyclopropane fatty acid synthase, putat... 27 9.0
At3g23510.1 68416.m02960 cyclopropane fatty acid synthase, putat... 27 9.0
>At3g45330.1 68416.m04894 lectin protein kinase family protein
contains Serine/Threonine protein kinases active-site
signature, Prosite:PS00108; contains Pfam profiles
PF00069: Protein kinase domain, PF00139: Legume lectins
beta domain, PF00138: Legume lectins alpha domain
Length = 682
Score = 38.7 bits (86), Expect = 0.004
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Frame = +3
Query: 207 VQEILKDMASQGDYASKHQRWPKPPELSP---IYLPVSPVMPVQPLTSLTLTQTASGPET 377
+ E +M Y ++HQR P+ +P + PV +P +TS ++T + SGP
Sbjct: 602 IPEARPNMEQVVQYINRHQRLPEFSPNTPGIGVSTPVLMGLPSLAITSSSVTSSVSGPSA 661
Query: 378 SPASDNLSVPSSDT 419
SP+S N S+ S T
Sbjct: 662 SPSSANNSMFISHT 675
>At2g16890.2 68415.m01944 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 478
Score = 33.5 bits (73), Expect = 0.14
Identities = 17/51 (33%), Positives = 31/51 (60%)
Frame = -2
Query: 496 QGWSDRVSELTRVDDELIDKIQVLSHVSEEGTERLSEAGEVSGPDAVCVRV 344
+G++DR+ E + + +D+ ++LSH S +G LS G S +++CV V
Sbjct: 326 EGFNDRIRESGMIVRDWVDQWEILSHESVKGF--LSHCGWNSAQESICVGV 374
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 31.5 bits (68), Expect = 0.56
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +3
Query: 270 PKPPELSPIYLPVSPVMPVQPLTS-LTLTQTASGPETSPASDNLSVPSSDTWD 425
P PP SP P PV P+ P TS + T S E+ S + P+ D+ D
Sbjct: 811 PPPPVFSP---PPKPVTPLPPATSPMANAPTPSSSESGEISTPVQAPTPDSED 860
Score = 28.3 bits (60), Expect = 5.2
Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 5/49 (10%)
Frame = +3
Query: 276 PPELSPIYLPVSPVM-----PVQPLTSLTLTQTASGPETSPASDNLSVP 407
PP SPIY P PV PV PL T + +S S +S P
Sbjct: 802 PPPPSPIYSPPPPVFSPPPKPVTPLPPATSPMANAPTPSSSESGEISTP 850
>At5g14920.1 68418.m01750 gibberellin-regulated family protein
similar to SP|P46689 Gibberellin-regulated protein 1
precursor {Arabidopsis thaliana}; contains Pfam profile
PF02704: Gibberellin regulated protein
Length = 275
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Frame = +3
Query: 273 KPPELSPIYLPVSPVM---PVQPLTSLTLTQTASGPETSP 383
KPP SP+ P +P + PVQP T T P T+P
Sbjct: 132 KPPTTSPVKPPTTPPVQSPPVQPPTYKPPTSPVKPPTTTP 171
Score = 28.3 bits (60), Expect = 5.2
Identities = 19/47 (40%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
Frame = +3
Query: 276 PPELSPIYLPVSP-VMP--VQPLTSLTLTQTASGPETSPASDNLSVP 407
PP P Y P +P V P VQP T T T P TSP + P
Sbjct: 100 PPVQPPTYKPPTPTVKPPSVQPPTYKPPTPTVKPPTTSPVKPPTTPP 146
>At5g43560.2 68418.m05326 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein weak similarity
to ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471; contains Pfam profile PF00917: MATH domain
Length = 1055
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = +3
Query: 270 PKPPELSPIYLPVSPVMPVQPLTSLTLTQTASGPETSPASDNLSVPS 410
P PP P+ P+ P P+ S T TAS + ++ L P+
Sbjct: 759 PAPPMSRPLSAPIIPPTQAAPVISAVQTSTASLARSMSSTGRLGSPT 805
>At5g43560.1 68418.m05325 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein weak similarity
to ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471; contains Pfam profile PF00917: MATH domain
Length = 1055
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = +3
Query: 270 PKPPELSPIYLPVSPVMPVQPLTSLTLTQTASGPETSPASDNLSVPS 410
P PP P+ P+ P P+ S T TAS + ++ L P+
Sbjct: 759 PAPPMSRPLSAPIIPPTQAAPVISAVQTSTASLARSMSSTGRLGSPT 805
>At3g20310.1 68416.m02573 ethylene-responsive element-binding family
protein similar to SP|O80339 Ethylene responsive element
binding factor 3 (AtERF3) {Arabidopsis thaliana};
contains Pfam profile PF00847: AP2 domain
Length = 244
Score = 29.1 bits (62), Expect = 3.0
Identities = 23/66 (34%), Positives = 28/66 (42%)
Frame = +3
Query: 174 DDTDKSIAILNVQEILKDMASQGDYASKHQRWPKPPELSPIYLPVSPVMPVQPLTSLTLT 353
D KS L + D A D A+++ R PK PI SP P+QPLT L
Sbjct: 44 DPLKKSRVWLGTFDSAVDAARAYDTAARNLRGPKAKTNFPI--DCSPSSPLQPLTYLHNQ 101
Query: 354 QTASGP 371
S P
Sbjct: 102 NLCSPP 107
>At2g17550.1 68415.m02031 expressed protein
Length = 765
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -2
Query: 475 SELTRVDDELIDKIQVLSHVSEEGTERLSEAGEVSGPDAVCVR 347
+EL R +EL ++QV + V EE + + ++ PD V VR
Sbjct: 546 NELRRQINELESEVQVRTPVEEEPIQEIETIVDLGNPDKVFVR 588
>At3g51290.1 68416.m05614 proline-rich family protein
Length = 602
Score = 28.7 bits (61), Expect = 3.9
Identities = 18/52 (34%), Positives = 21/52 (40%)
Frame = +3
Query: 270 PKPPELSPIYLPVSPVMPVQPLTSLTLTQTASGPETSPASDNLSVPSSDTWD 425
P PP P P P+ P T+ T T T+S P P S TWD
Sbjct: 74 PPPPPPRP---PPPPLSPGSETTTWTTTTTSSVLPPPPPPPPPPPPPSSTWD 122
>At5g66640.1 68418.m08399 LIM domain-containing protein-related
contains low similarity to Pfam profile PF00412: LIM
domain
Length = 450
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Frame = -3
Query: 195 RCFC--QCHRRSPMHVRLRN*LFHHQCRVEFH 106
RC C CHR MH L+ FH C E++
Sbjct: 95 RCLCCFHCHRPFVMHEILKKGKFHIDCYKEYY 126
>At2g39220.1 68415.m04817 patatin family protein similar to
patatin-like latex allergen [Hevea
brasiliensis][PMID:10589016]; contains patatin domain
PF01734
Length = 499
Score = 28.3 bits (60), Expect = 5.2
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Frame = -3
Query: 399 RDCLKPAKFP--DLTPSV*ELMTLAAAQASPGIPADRWAIIPAVWA 268
+D LKP P DLT S L + A A + G W + A WA
Sbjct: 233 KDTLKPVLIPCYDLTSSAPFLFSRADALETDGYDFKLWEVCRATWA 278
>At1g04150.1 68414.m00405 C2 domain-containing protein contains
INTERPRO:IPR000008 C2 domain
Length = 1012
Score = 28.3 bits (60), Expect = 5.2
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Frame = +3
Query: 96 YSDNEIPRDIDDGKASSVISRAWDYVD---DTDKSIAILNVQEILKDMASQGDYASKHQR 266
+++ P ++D+ + SR +D V D +SIA VQ ++ DMASQG+
Sbjct: 888 HAETVFPDELDEEFDTFPTSRGFDVVRMRYDRVRSIAG-RVQTVVGDMASQGERVQALLS 946
Query: 267 WPKP 278
W P
Sbjct: 947 WRDP 950
>At3g45220.1 68416.m04880 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 393
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +3
Query: 141 SSVISRAWDYVDDTDKSIAILNVQEILKDMASQGDYASKH 260
S+V +A VD+ A ++V + KDM GD+ + H
Sbjct: 328 SNVFHKACIEVDEEGTEAAAVSVASMTKDMLLMGDFVADH 367
>At3g12200.1 68416.m01521 protein kinase family protein contains
protein kinase domain, Pfam:PF00069; contains
serine/threonine protein kinase domain,
INTERPRO:IPR002290
Length = 571
Score = 27.9 bits (59), Expect = 6.8
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +3
Query: 285 LSPIYLPVSPVMPV 326
LSPIYLPV P+ PV
Sbjct: 283 LSPIYLPVFPIKPV 296
>At3g56150.1 68416.m06241 eukaryotic translation initiation factor 3
subunit 8 / eIF3 p110 / eIF3c / p105 (TIF3C1) nearly
identical to SP|O49160 Eukaryotic translation initiation
factor 3 subunit 8 (eIF3 p110) (eIF3c) (p105)
{Arabidopsis thaliana}
Length = 900
Score = 27.5 bits (58), Expect = 9.0
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = -2
Query: 511 HSGTTQGWSDRVSELTRVDDELIDKIQVLSHVSEEGTERLSE 386
+ G + W + V+ L RVD E +Q + + E ERL +
Sbjct: 346 YDGKIRVWGNLVAFLERVDTEFFKSLQCIDPHTREYVERLRD 387
>At3g23530.1 68416.m02961 cyclopropane fatty acid synthase, putative
/ CPA-FA synthase, putative similar to cyclopropane
synthase [Sterculia foetida] GI:21069167; contains Pfam
profiles PF02353: Cyclopropane-fatty-acyl-phospholipid
synthase, PF01593: amine oxidase, flavin-containing
Length = 867
Score = 27.5 bits (58), Expect = 9.0
Identities = 12/50 (24%), Positives = 24/50 (48%)
Frame = +3
Query: 96 YSDNEIPRDIDDGKASSVISRAWDYVDDTDKSIAILNVQEILKDMASQGD 245
YSD + DID + AW+++ T+K + + IL+++ +
Sbjct: 297 YSDIYLHHDIDLMPRNQAAWSAWNFLGSTEKKVCVTYWLNILQNLGENSE 346
>At3g23510.1 68416.m02960 cyclopropane fatty acid synthase, putative
/ CPA-FA synthase, putative similar to cyclopropane
synthase [Sterculia foetida] GI:21069167; contains Pfam
profile PF02353: Cyclopropane-fatty-acyl-phospholipid
synthase
Length = 867
Score = 27.5 bits (58), Expect = 9.0
Identities = 12/50 (24%), Positives = 24/50 (48%)
Frame = +3
Query: 96 YSDNEIPRDIDDGKASSVISRAWDYVDDTDKSIAILNVQEILKDMASQGD 245
YSD + DID + AW+++ T+K + + IL+++ +
Sbjct: 297 YSDIYLHHDIDLMPRNKAAWSAWNFLGSTEKKVCVTYWLNILQNLGENSE 346
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,449,187
Number of Sequences: 28952
Number of extensions: 299977
Number of successful extensions: 1207
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1136
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1205
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1496852856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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