Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0114
(499 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g59660.1 68414.m06710 nucleoporin family protein contains Pfa... 32 0.19
At4g20110.1 68417.m02943 vacuolar sorting receptor, putative sim... 31 0.33
At1g15780.1 68414.m01893 expressed protein 31 0.43
At2g14740.2 68415.m01663 vacuolar sorting receptor, putative nea... 30 0.75
At2g14740.1 68415.m01662 vacuolar sorting receptor, putative nea... 30 0.75
At2g14720.2 68415.m01657 vacuolar sorting receptor, putative ide... 30 0.75
At2g14720.1 68415.m01656 vacuolar sorting receptor, putative ide... 30 0.75
At1g30900.1 68414.m03780 vacuolar sorting receptor, putative sim... 30 1.00
At3g03540.1 68416.m00355 phosphoesterase family protein similar ... 29 1.3
At3g03530.1 68416.m00353 phosphoesterase family protein low simi... 29 1.3
At1g61140.1 68414.m06888 SNF2 domain-containing protein / helica... 29 1.3
At2g30290.1 68415.m03687 vacuolar sorting receptor, putative sim... 29 1.7
At3g52850.1 68416.m05824 vacuolar sorting receptor, putative nea... 29 2.3
At2g30480.2 68415.m03713 expressed protein 29 2.3
At2g30480.1 68415.m03712 expressed protein 29 2.3
At1g07720.1 68414.m00832 beta-ketoacyl-CoA synthase family prote... 29 2.3
At2g34940.1 68415.m04289 vacuolar sorting receptor, putative sim... 28 3.0
At1g74940.1 68414.m08695 senescence-associated protein-related s... 27 7.0
At1g60900.1 68414.m06856 U2 snRNP auxiliary factor large subunit... 27 7.0
At5g04960.1 68418.m00525 pectinesterase family protein contains ... 27 9.3
At3g22770.1 68416.m02871 F-box family protein-related contains T... 27 9.3
At3g07560.1 68416.m00903 glycine-rich protein 27 9.3
At2g44910.1 68415.m05590 homeobox-leucine zipper protein 4 (HB-4... 27 9.3
At1g17360.1 68414.m02116 COP1-interacting protein-related simila... 27 9.3
At1g03445.1 68414.m00325 kelch repeat-containing protein / serin... 27 9.3
>At1g59660.1 68414.m06710 nucleoporin family protein contains Pfam
profiles: PF04096 nucleoporin autopeptidase, PF03093
nucleoporin FG repeat family
Length = 997
Score = 32.3 bits (70), Expect = 0.19
Identities = 21/53 (39%), Positives = 26/53 (49%)
Frame = -1
Query: 466 TTPGFGPFCCPSHGLPGNSSQGCPLVCTILSPFTSTTQRNRAQHVGNSTFSSS 308
+TP FG P G + L SPF STTQ+++ GNSTF SS
Sbjct: 94 STPSFGSSNSPFGGTSTFGQKSFGLSTPQSSPFGSTTQQSQPA-FGNSTFGSS 145
>At4g20110.1 68417.m02943 vacuolar sorting receptor, putative
similar to BP-80 vacuolar sorting receptor [Pisum
sativum] GI:1737222; identical to vacuolar sorting
receptor-like protein (GI:2827665) [Arabidopsis
thaliana]
Length = 625
Score = 31.5 bits (68), Expect = 0.33
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +1
Query: 133 QACVDKYSRKGYQPWQEWSDHYTCHRYRCEIRDGKYFI 246
Q CV + + + +PW W D+ T RC +++ KY I
Sbjct: 284 QLCVHRVANESSRPWVWW-DYVTDFHSRCSMKEKKYSI 320
>At1g15780.1 68414.m01893 expressed protein
Length = 1335
Score = 31.1 bits (67), Expect = 0.43
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +3
Query: 156 QERLPAVARVVGSLHVPPLQMRDQRREILHSCCGCRKPKIPGNALECHEYIEDEN 320
Q+RL A +V GSL +PP + DQ+R++ S P++P ++L+ E N
Sbjct: 538 QQRLQASGQVTGSL-LPPQNVVDQQRQLYQS--QRTLPEMPSSSLDSTAQTESAN 589
>At2g14740.2 68415.m01663 vacuolar sorting receptor, putative nearly
identical to vacuolar sorting receptor homolog
[Arabidopsis thaliana] GI:1737220; contains a
calcium-binding EGF-like domain signature
Length = 628
Score = 30.3 bits (65), Expect = 0.75
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +1
Query: 133 QACVDKYSRKGYQPWQEWSDHYTCHRYRCEIRDGKY 240
Q CV K + + +PW W D+ T + RC +++ KY
Sbjct: 286 QLCVYKVANETGKPWVWW-DYVTDFQIRCPMKEKKY 320
>At2g14740.1 68415.m01662 vacuolar sorting receptor, putative nearly
identical to vacuolar sorting receptor homolog
[Arabidopsis thaliana] GI:1737220; contains a
calcium-binding EGF-like domain signature
Length = 628
Score = 30.3 bits (65), Expect = 0.75
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +1
Query: 133 QACVDKYSRKGYQPWQEWSDHYTCHRYRCEIRDGKY 240
Q CV K + + +PW W D+ T + RC +++ KY
Sbjct: 286 QLCVYKVANETGKPWVWW-DYVTDFQIRCPMKEKKY 320
>At2g14720.2 68415.m01657 vacuolar sorting receptor, putative
identical to GB:U79960 GI:1737220; contains a
calcium-binding EGF-like domain signature
Length = 628
Score = 30.3 bits (65), Expect = 0.75
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +1
Query: 133 QACVDKYSRKGYQPWQEWSDHYTCHRYRCEIRDGKY 240
Q CV K + + +PW W D+ T + RC +++ KY
Sbjct: 286 QLCVYKVANETGKPWVWW-DYVTDFQIRCPMKEKKY 320
>At2g14720.1 68415.m01656 vacuolar sorting receptor, putative
identical to GB:U79960 GI:1737220; contains a
calcium-binding EGF-like domain signature
Length = 628
Score = 30.3 bits (65), Expect = 0.75
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +1
Query: 133 QACVDKYSRKGYQPWQEWSDHYTCHRYRCEIRDGKY 240
Q CV K + + +PW W D+ T + RC +++ KY
Sbjct: 286 QLCVYKVANETGKPWVWW-DYVTDFQIRCPMKEKKY 320
>At1g30900.1 68414.m03780 vacuolar sorting receptor, putative
similar to BP-80 vacuolar sorting receptor [Pisum
sativum] GI:1737222
Length = 631
Score = 29.9 bits (64), Expect = 1.00
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 133 QACVDKYSRKGYQPWQEWSDHYTCHRYRCEIRDGKY 240
Q CV K +++ + W W D+ T RC +++ KY
Sbjct: 283 QLCVHKVAKENNRSWVWW-DYVTDFHIRCSMKEKKY 317
>At3g03540.1 68416.m00355 phosphoesterase family protein similar to
SP|P95246 Phospholipase C 2 precursor (EC 3.1.4.3)
{Mycobacterium tuberculosis}; contains Pfam profile
PF04185: Phosphoesterase family
Length = 521
Score = 29.5 bits (63), Expect = 1.3
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 420 GKPWEGQQNGPNPGVVGISGIQQ 488
GKPW+ PNPG +SG Q
Sbjct: 89 GKPWDSGHPDPNPGPATMSGFAQ 111
>At3g03530.1 68416.m00353 phosphoesterase family protein low
similarity to SP|P95246 Phospholipase C 2 precursor (EC
3.1.4.3) {Mycobacterium tuberculosis}; contains Pfam
profile PF04185: Phosphoesterase family
Length = 538
Score = 29.5 bits (63), Expect = 1.3
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 420 GKPWEGQQNGPNPGVVGISGIQQ 488
GKPW+ + PNPG +SG Q
Sbjct: 90 GKPWDSGKPDPNPGHPNMSGFAQ 112
>At1g61140.1 68414.m06888 SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
similar to ATPase [Homo sapiens] GI:531196; contains
Pfam profiles PF00271: Helicase conserved C-terminal
domain, PF00176: SNF2 family N-terminal domain, PF00097:
Zinc finger, C3HC4 type (RING finger)
Length = 1287
Score = 29.5 bits (63), Expect = 1.3
Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 11/72 (15%)
Frame = -2
Query: 417 GTVRKVALWFALF---SPHLLRRRNAIAHSTWGIRHSHLRCIRGIPVRFPV--------F 271
G + KV+ WF + + + + +A + WG+R C+ G P++ + F
Sbjct: 787 GPLAKVS-WFRVVLDEAQSIKNYKTQVARACWGLRAKRRWCLSGTPIQNSIDDLYSYFRF 845
Query: 270 LVFDIHSSYEVF 235
L +D +SSY +F
Sbjct: 846 LKYDPYSSYVLF 857
>At2g30290.1 68415.m03687 vacuolar sorting receptor, putative
similar to vacuolar sorting receptor homolog
[Arabidopsis thaliana] GI:1737218
Length = 625
Score = 29.1 bits (62), Expect = 1.7
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 133 QACVDKYSRKGYQPWQEWSDHYTCHRYRCEIRDGKY 240
QAC + + + +PW W D+ T RC +++ KY
Sbjct: 285 QACFFRVTNESGKPWLWW-DYVTDFAIRCPMKEEKY 319
>At3g52850.1 68416.m05824 vacuolar sorting receptor, putative nearly
identical to vacuolar sorting receptor homolog
(GP:1737218) [Arabidopsis thaliana]
Length = 623
Score = 28.7 bits (61), Expect = 2.3
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 133 QACVDKYSRKGYQPWQEWSDHYTCHRYRCEIRDGKY 240
QACV + +PW W D+ T RC +++ KY
Sbjct: 281 QACVYRVMNDTGKPWVWW-DYVTDFAIRCPMKEKKY 315
>At2g30480.2 68415.m03713 expressed protein
Length = 566
Score = 28.7 bits (61), Expect = 2.3
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +1
Query: 118 EDVSYQACVDKYSRKG--YQPWQEWSDHYTCHRYRCEIRDGKYFIAAVDVENQKYRETHW 291
+D Y++ + +++ G Q Q +SDH H+ + R+ YF D N ++ + W
Sbjct: 168 DDSLYRSPIGIHAKDGGRKQKLQTFSDHL--HKQYSDSRN--YFCDVADFNNSRFSDDEW 223
Query: 292 NA 297
NA
Sbjct: 224 NA 225
>At2g30480.1 68415.m03712 expressed protein
Length = 621
Score = 28.7 bits (61), Expect = 2.3
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +1
Query: 118 EDVSYQACVDKYSRKG--YQPWQEWSDHYTCHRYRCEIRDGKYFIAAVDVENQKYRETHW 291
+D Y++ + +++ G Q Q +SDH H+ + R+ YF D N ++ + W
Sbjct: 168 DDSLYRSPIGIHAKDGGRKQKLQTFSDHL--HKQYSDSRN--YFCDVADFNNSRFSDDEW 223
Query: 292 NA 297
NA
Sbjct: 224 NA 225
>At1g07720.1 68414.m00832 beta-ketoacyl-CoA synthase family protein
similar to GB:AAC99312 from [Arabidopsis thaliana]
(Plant J. (1999) In press)
Length = 478
Score = 28.7 bits (61), Expect = 2.3
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +1
Query: 73 ALFMLCCLVLPALSAEDVSYQACVDKYSRKGY 168
A+F L CLV A D S+ ACV K G+
Sbjct: 236 AMFKLRCLVRTHHGARDDSFNACVQKEDELGH 267
>At2g34940.1 68415.m04289 vacuolar sorting receptor, putative
similar to BP-80 vacuolar sorting receptor [Pisum
sativum] GI:1737222
Length = 618
Score = 28.3 bits (60), Expect = 3.0
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +1
Query: 133 QACVDKYSRKGYQPWQEWSDHYTCHRYRCEIRDGKY 240
Q CV K +++ W W D+ T RC +++ KY
Sbjct: 282 QLCVHKVAKEKNTSWVWW-DYVTDFNIRCSMKEKKY 316
>At1g74940.1 68414.m08695 senescence-associated protein-related
similar to senescence-associated protein SAG102
(GI:22331931) [Arabidopsis thaliana]
Length = 222
Score = 27.1 bits (57), Expect = 7.0
Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Frame = +3
Query: 204 PPLQMRDQRR---EILHSCCGCRKPKIPGNALECHEYIEDENVEFPTCCARLRCVVEVNG 374
PP+ R R E L SCC C+K K+ G + Y+ + F C A R V +N
Sbjct: 136 PPVIERQSVRGPTEFLSSCCLCKK-KLQGKDI----YMYKGEMGF--CSAECRSVQIMND 188
Query: 375 ERIVQTRGQ 401
ER Q + Q
Sbjct: 189 ERQEQCKTQ 197
>At1g60900.1 68414.m06856 U2 snRNP auxiliary factor large subunit,
putative similar to U2 snRNP auxiliary factor, large
subunit GB:CAA77136 from [Nicotiana plumbaginifolia]
Length = 589
Score = 27.1 bits (57), Expect = 7.0
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -2
Query: 252 SSYEVFPVSDLASVAVARVVIRPLLPRLVTFPGVF 148
S +++ P LA+ AVA P +P T PG+F
Sbjct: 189 SGFDMAPPDMLAATAVAAAGQVPSVPTTATIPGMF 223
>At5g04960.1 68418.m00525 pectinesterase family protein contains
Pfam profile: PF01095 pectinesterase
Length = 564
Score = 26.6 bits (56), Expect = 9.3
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3
Query: 399 QPCELFPGKPWEGQQN 446
Q CE+ P +P +GQQN
Sbjct: 417 QKCEILPRRPMKGQQN 432
>At3g22770.1 68416.m02871 F-box family protein-related contains
TIGRFAM TIGR01640: F-box protein interaction domain
Length = 327
Score = 26.6 bits (56), Expect = 9.3
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = -2
Query: 321 HSHLRCIRGIPVRFPVFLVFDIHS-SYEVFPVS 226
H LRCI + F F+++D +S S+ VF V+
Sbjct: 109 HKILRCITCLRPHFHEFIIYDFNSNSWRVFHVT 141
>At3g07560.1 68416.m00903 glycine-rich protein
Length = 304
Score = 26.6 bits (56), Expect = 9.3
Identities = 12/22 (54%), Positives = 13/22 (59%), Gaps = 2/22 (9%)
Frame = +3
Query: 399 QPCELFPGKPW--EGQQNGPNP 458
QP P KPW EG +GPNP
Sbjct: 4 QPAGGSPPKPWEKEGNTSGPNP 25
>At2g44910.1 68415.m05590 homeobox-leucine zipper protein 4 (HB-4) /
HD-ZIP protein 4 identical to Homeobox-leucine zipper
protein ATHB-4 (HD-ZIP protein ATHB-4) (SP:P92953)
[Arabidopsis thaliana]
Length = 318
Score = 26.6 bits (56), Expect = 9.3
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = -1
Query: 418 GNSSQGCPLVCTILSPFTSTTQRNRAQHVGNSTFSSSMYSWHSSAFPGIF 269
GNS Q P + L P T+++ + QH+ N +S H+ ++ +F
Sbjct: 15 GNSQQKEPSLRLNLMPLTTSSSSSSFQHMHNQNNNSHPQKIHNISWTHLF 64
>At1g17360.1 68414.m02116 COP1-interacting protein-related similar
to COP1-Interacting Protein 7 (CIP7) (GI:3327870)
[Arabidopsis thaliana]
Length = 1032
Score = 26.6 bits (56), Expect = 9.3
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = +1
Query: 388 KPEGNLANCSPVNHGRGNKTGQILVL--SGLAGFS 486
KP G ++N + GRG KT +I ++ S L FS
Sbjct: 677 KPSGKVSNTNTNTSGRGRKTSEIKLVTQSSLPKFS 711
>At1g03445.1 68414.m00325 kelch repeat-containing protein /
serine/threonine phosphoesterase family protein contains
Pfam profiles: PF00149 calcineurin-like phosphoesterase,
PF01344: kelch motif
Length = 795
Score = 26.6 bits (56), Expect = 9.3
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = +1
Query: 214 RCEIRDGKYFIAAVDVENQKYRETHWNATNTSKMRMSNSPRAVRDC 351
R + DG+ +A +D E ++ +T+ T+ S N + +R C
Sbjct: 324 RARLIDGEAVVAVLDTETGEWVDTNQPETSASGANRQNQYQLMRRC 369
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,103,850
Number of Sequences: 28952
Number of extensions: 266077
Number of successful extensions: 890
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 855
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 889
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 878448512
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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