Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0111
(598 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 149 1e-36
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 149 1e-36
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 149 1e-36
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 149 2e-36
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 147 4e-36
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 147 6e-36
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 146 1e-35
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 146 1e-35
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 145 2e-35
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 74 8e-14
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 74 8e-14
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 73 1e-13
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 73 1e-13
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 73 1e-13
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 73 1e-13
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 71 6e-13
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 62 4e-10
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 61 5e-10
At4g37190.1 68417.m05265 expressed protein 31 0.44
At2g31580.1 68415.m03858 expressed protein contains Pfam profi... 31 0.58
At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putati... 27 7.2
At5g24010.1 68418.m02821 protein kinase family protein contains ... 27 9.5
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 149 bits (361), Expect = 1e-36
Identities = 69/91 (75%), Positives = 76/91 (83%), Gaps = 1/91 (1%)
Frame = +3
Query: 249 PR-ILVXLEPGTMDSVRSGPFGQIFRPDNFXFXQXGAGNNWAKGHYTEGAXLVDSVIDVV 425
PR +L+ LEPGTMDSVRSGP+GQIFRPDNF F Q GAGNNWAKGHYTEGA L+DSV+DVV
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 426 RKEAESCDCLQGFQLTHSLXRXHRFXYGTLL 518
RKEAE+CDCLQGFQ+ HSL GTLL
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLL 151
Score = 107 bits (257), Expect = 6e-24
Identities = 45/62 (72%), Positives = 53/62 (85%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDXHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MREI+HIQ GQCGNQIGAKFWE++ HGID TG Y G++DLQLER+NVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFV 60
Query: 247 XR 252
R
Sbjct: 61 PR 62
Score = 51.2 bits (117), Expect = 5e-07
Identities = 24/34 (70%), Positives = 26/34 (76%)
Frame = +1
Query: 484 GGXTGSCMAPSXISKIREEYPDRIMNTYSVVPSP 585
GG TGS M ISKIREEYPDR+M T+SV PSP
Sbjct: 140 GGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSP 173
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 149 bits (361), Expect = 1e-36
Identities = 69/91 (75%), Positives = 76/91 (83%), Gaps = 1/91 (1%)
Frame = +3
Query: 249 PR-ILVXLEPGTMDSVRSGPFGQIFRPDNFXFXQXGAGNNWAKGHYTEGAXLVDSVIDVV 425
PR +L+ LEPGTMDS+RSGPFGQIFRPDNF F Q GAGNNWAKGHYTEGA L+DSV+DVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 426 RKEAESCDCLQGFQLTHSLXRXHRFXYGTLL 518
RKEAE+CDCLQGFQ+ HSL GTLL
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLL 151
Score = 110 bits (264), Expect = 8e-25
Identities = 49/62 (79%), Positives = 53/62 (85%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDXHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MREI+HIQ GQCGNQIGAKFWE+I HGID TG GD+DLQLERINVY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQLERINVYFNEASGGKYV 60
Query: 247 XR 252
R
Sbjct: 61 PR 62
Score = 51.6 bits (118), Expect = 4e-07
Identities = 24/34 (70%), Positives = 26/34 (76%)
Frame = +1
Query: 484 GGXTGSCMAPSXISKIREEYPDRIMNTYSVVPSP 585
GG TGS M ISKIREEYPDR+M T+SV PSP
Sbjct: 140 GGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSP 173
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 149 bits (361), Expect = 1e-36
Identities = 69/91 (75%), Positives = 76/91 (83%), Gaps = 1/91 (1%)
Frame = +3
Query: 249 PR-ILVXLEPGTMDSVRSGPFGQIFRPDNFXFXQXGAGNNWAKGHYTEGAXLVDSVIDVV 425
PR +L+ LEPGTMDSVRSGP+GQIFRPDNF F Q GAGNNWAKGHYTEGA L+DSV+DVV
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 426 RKEAESCDCLQGFQLTHSLXRXHRFXYGTLL 518
RKEAE+CDCLQGFQ+ HSL GTLL
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLL 151
Score = 107 bits (258), Expect = 4e-24
Identities = 46/62 (74%), Positives = 54/62 (87%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDXHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MREI+HIQ GQCGNQIG+KFWE+++ HGID TG Y GDS+LQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQLERVNVYYNEASCGRYV 60
Query: 247 XR 252
R
Sbjct: 61 PR 62
Score = 51.6 bits (118), Expect = 4e-07
Identities = 24/34 (70%), Positives = 26/34 (76%)
Frame = +1
Query: 484 GGXTGSCMAPSXISKIREEYPDRIMNTYSVVPSP 585
GG TGS M ISKIREEYPDR+M T+SV PSP
Sbjct: 140 GGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSP 173
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 149 bits (360), Expect = 2e-36
Identities = 68/91 (74%), Positives = 76/91 (83%), Gaps = 1/91 (1%)
Frame = +3
Query: 249 PR-ILVXLEPGTMDSVRSGPFGQIFRPDNFXFXQXGAGNNWAKGHYTEGAXLVDSVIDVV 425
PR +L+ LEPGTMDS+RSGPFGQIFRPDNF F Q GAGNNWAKGHYTEGA L+D+V+DVV
Sbjct: 62 PRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 121
Query: 426 RKEAESCDCLQGFQLTHSLXRXHRFXYGTLL 518
RKEAE+CDCLQGFQ+ HSL GTLL
Sbjct: 122 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLL 152
Score = 112 bits (269), Expect = 2e-25
Identities = 50/63 (79%), Positives = 55/63 (87%), Gaps = 1/63 (1%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDXHGIDPTGAYHGD-SDLQLERINVYYNEASGGKY 243
MREI+HIQ GQCGNQIG+KFWE+I D HGID TG Y GD +DLQLERINVYYNEASGG+Y
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQLERINVYYNEASGGRY 60
Query: 244 VXR 252
V R
Sbjct: 61 VPR 63
Score = 51.2 bits (117), Expect = 5e-07
Identities = 24/34 (70%), Positives = 26/34 (76%)
Frame = +1
Query: 484 GGXTGSCMAPSXISKIREEYPDRIMNTYSVVPSP 585
GG TGS M ISKIREEYPDR+M T+SV PSP
Sbjct: 141 GGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSP 174
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 147 bits (357), Expect = 4e-36
Identities = 67/91 (73%), Positives = 76/91 (83%), Gaps = 1/91 (1%)
Frame = +3
Query: 249 PR-ILVXLEPGTMDSVRSGPFGQIFRPDNFXFXQXGAGNNWAKGHYTEGAXLVDSVIDVV 425
PR +L+ LEPGTMDS+RSGP+GQIFRPDNF F Q GAGNNWAKGHYTEGA L+D+V+DVV
Sbjct: 62 PRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 121
Query: 426 RKEAESCDCLQGFQLTHSLXRXHRFXYGTLL 518
RKEAE+CDCLQGFQ+ HSL GTLL
Sbjct: 122 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLL 152
Score = 116 bits (280), Expect = 9e-27
Identities = 50/63 (79%), Positives = 57/63 (90%), Gaps = 1/63 (1%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDXHGIDPTGAYHGDS-DLQLERINVYYNEASGGKY 243
MREI+H+Q GQCGNQIG+KFWE+I D HG+DPTG Y+GDS DLQLERINVYYNEASGG+Y
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASGGRY 60
Query: 244 VXR 252
V R
Sbjct: 61 VPR 63
Score = 51.2 bits (117), Expect = 5e-07
Identities = 24/34 (70%), Positives = 26/34 (76%)
Frame = +1
Query: 484 GGXTGSCMAPSXISKIREEYPDRIMNTYSVVPSP 585
GG TGS M ISKIREEYPDR+M T+SV PSP
Sbjct: 141 GGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSP 174
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 147 bits (356), Expect = 6e-36
Identities = 68/91 (74%), Positives = 76/91 (83%), Gaps = 1/91 (1%)
Frame = +3
Query: 249 PR-ILVXLEPGTMDSVRSGPFGQIFRPDNFXFXQXGAGNNWAKGHYTEGAXLVDSVIDVV 425
PR IL+ LEPGTMDSVR+GP+GQIFRPDNF F Q GAGNNWAKGHYTEGA L+D+V+DVV
Sbjct: 61 PRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
Query: 426 RKEAESCDCLQGFQLTHSLXRXHRFXYGTLL 518
RKEAE+CDCLQGFQ+ HSL GTLL
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLL 151
Score = 113 bits (273), Expect = 6e-26
Identities = 48/62 (77%), Positives = 55/62 (88%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDXHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MREI+HIQ GQCGNQIG+KFWE++ D HGIDPTG Y G+SDLQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYV 60
Query: 247 XR 252
R
Sbjct: 61 PR 62
Score = 51.2 bits (117), Expect = 5e-07
Identities = 24/34 (70%), Positives = 26/34 (76%)
Frame = +1
Query: 484 GGXTGSCMAPSXISKIREEYPDRIMNTYSVVPSP 585
GG TGS M ISKIREEYPDR+M T+SV PSP
Sbjct: 140 GGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSP 173
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 146 bits (353), Expect = 1e-35
Identities = 67/91 (73%), Positives = 75/91 (82%), Gaps = 1/91 (1%)
Frame = +3
Query: 249 PR-ILVXLEPGTMDSVRSGPFGQIFRPDNFXFXQXGAGNNWAKGHYTEGAXLVDSVIDVV 425
PR +L+ LEPGTMDS+RSGP+GQ FRPDNF F Q GAGNNWAKGHYTEGA L+DSV+DVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 426 RKEAESCDCLQGFQLTHSLXRXHRFXYGTLL 518
RKEAE+CDCLQGFQ+ HSL GTLL
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLL 151
Score = 113 bits (271), Expect = 1e-25
Identities = 49/62 (79%), Positives = 54/62 (87%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDXHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MREI+HIQ GQCGNQIGAKFWE++ HGIDPTG Y GDSDLQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 247 XR 252
R
Sbjct: 61 PR 62
Score = 51.2 bits (117), Expect = 5e-07
Identities = 24/34 (70%), Positives = 26/34 (76%)
Frame = +1
Query: 484 GGXTGSCMAPSXISKIREEYPDRIMNTYSVVPSP 585
GG TGS M ISKIREEYPDR+M T+SV PSP
Sbjct: 140 GGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSP 173
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 146 bits (353), Expect = 1e-35
Identities = 67/91 (73%), Positives = 75/91 (82%), Gaps = 1/91 (1%)
Frame = +3
Query: 249 PR-ILVXLEPGTMDSVRSGPFGQIFRPDNFXFXQXGAGNNWAKGHYTEGAXLVDSVIDVV 425
PR +L+ LEPGTMDS+RSGP+GQ FRPDNF F Q GAGNNWAKGHYTEGA L+DSV+DVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 426 RKEAESCDCLQGFQLTHSLXRXHRFXYGTLL 518
RKEAE+CDCLQGFQ+ HSL GTLL
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLL 151
Score = 113 bits (271), Expect = 1e-25
Identities = 49/62 (79%), Positives = 54/62 (87%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDXHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MREI+HIQ GQCGNQIGAKFWE++ HGIDPTG Y GDSDLQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 247 XR 252
R
Sbjct: 61 PR 62
Score = 51.2 bits (117), Expect = 5e-07
Identities = 24/34 (70%), Positives = 26/34 (76%)
Frame = +1
Query: 484 GGXTGSCMAPSXISKIREEYPDRIMNTYSVVPSP 585
GG TGS M ISKIREEYPDR+M T+SV PSP
Sbjct: 140 GGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSP 173
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 145 bits (351), Expect = 2e-35
Identities = 68/91 (74%), Positives = 75/91 (82%), Gaps = 1/91 (1%)
Frame = +3
Query: 249 PR-ILVXLEPGTMDSVRSGPFGQIFRPDNFXFXQXGAGNNWAKGHYTEGAXLVDSVIDVV 425
PR +L+ LEPGTMDS+RSGPFGQIFRPDNF F Q GAGNNWAKGHYTEGA L+DSV+DVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 426 RKEAESCDCLQGFQLTHSLXRXHRFXYGTLL 518
RKEAE+ DCLQGFQ+ HSL GTLL
Sbjct: 121 RKEAENSDCLQGFQVCHSLGGGTGSGMGTLL 151
Score = 112 bits (270), Expect = 1e-25
Identities = 50/62 (80%), Positives = 54/62 (87%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDXHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MREI+HIQ GQCGNQIGAKFWE+I D HGID TG Y GDS LQLERI+VY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLERIDVYFNEASGGKYV 60
Query: 247 XR 252
R
Sbjct: 61 PR 62
Score = 51.6 bits (118), Expect = 4e-07
Identities = 24/34 (70%), Positives = 26/34 (76%)
Frame = +1
Query: 484 GGXTGSCMAPSXISKIREEYPDRIMNTYSVVPSP 585
GG TGS M ISKIREEYPDR+M T+SV PSP
Sbjct: 140 GGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSP 173
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 73.7 bits (173), Expect = 8e-14
Identities = 37/91 (40%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Frame = +3
Query: 249 PR-ILVXLEPGTMDSVRSGPFGQIFRPDNFXFXQXGAGNNWAKGHYTEGAXLVDSVIDVV 425
PR + V LEP +D VR+G + Q+F P+ + A NN+A+GHYT G +VD +D V
Sbjct: 63 PRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRV 122
Query: 426 RKEAESCDCLQGFQLTHSLXRXHRFXYGTLL 518
RK A++C LQGF + +++ G+LL
Sbjct: 123 RKLADNCTGLQGFLVFNAVGGGTGSGLGSLL 153
Score = 51.6 bits (118), Expect = 4e-07
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDXHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 240
MREI+ I GQ G Q+G WE+ HGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 241 YVXR 252
+V R
Sbjct: 61 HVPR 64
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 73.7 bits (173), Expect = 8e-14
Identities = 37/91 (40%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Frame = +3
Query: 249 PR-ILVXLEPGTMDSVRSGPFGQIFRPDNFXFXQXGAGNNWAKGHYTEGAXLVDSVIDVV 425
PR + V LEP +D VR+G + Q+F P+ + A NN+A+GHYT G +VD +D V
Sbjct: 63 PRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRV 122
Query: 426 RKEAESCDCLQGFQLTHSLXRXHRFXYGTLL 518
RK A++C LQGF + +++ G+LL
Sbjct: 123 RKLADNCTGLQGFLVFNAVGGGTGSGLGSLL 153
Score = 51.6 bits (118), Expect = 4e-07
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDXHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 240
MREI+ I GQ G Q+G WE+ HGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 241 YVXR 252
+V R
Sbjct: 61 HVPR 64
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 72.9 bits (171), Expect = 1e-13
Identities = 36/91 (39%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Frame = +3
Query: 249 PR-ILVXLEPGTMDSVRSGPFGQIFRPDNFXFXQXGAGNNWAKGHYTEGAXLVDSVIDVV 425
PR + V LEP +D VR+G + Q+F P+ + A NN+A+GHYT G +VD +D +
Sbjct: 63 PRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRI 122
Query: 426 RKEAESCDCLQGFQLTHSLXRXHRFXYGTLL 518
RK A++C LQGF + +++ G+LL
Sbjct: 123 RKLADNCTGLQGFLVFNAVGGGTGSGLGSLL 153
Score = 49.2 bits (112), Expect = 2e-06
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDXHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 240
MRE + I GQ G Q+G WE+ HGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 241 YVXR 252
+V R
Sbjct: 61 HVPR 64
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 72.9 bits (171), Expect = 1e-13
Identities = 36/91 (39%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Frame = +3
Query: 249 PR-ILVXLEPGTMDSVRSGPFGQIFRPDNFXFXQXGAGNNWAKGHYTEGAXLVDSVIDVV 425
PR + V LEP +D VR+G + Q+F P+ + A NN+A+GHYT G +VD +D +
Sbjct: 63 PRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRI 122
Query: 426 RKEAESCDCLQGFQLTHSLXRXHRFXYGTLL 518
RK A++C LQGF + +++ G+LL
Sbjct: 123 RKLADNCTGLQGFLVFNAVGGGTGSGLGSLL 153
Score = 49.2 bits (112), Expect = 2e-06
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDXHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 240
MRE + I GQ G Q+G WE+ HGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 241 YVXR 252
+V R
Sbjct: 61 HVPR 64
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 72.9 bits (171), Expect = 1e-13
Identities = 36/91 (39%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Frame = +3
Query: 249 PR-ILVXLEPGTMDSVRSGPFGQIFRPDNFXFXQXGAGNNWAKGHYTEGAXLVDSVIDVV 425
PR + V LEP +D VR+G + Q+F P+ + A NN+A+GHYT G +VD +D +
Sbjct: 63 PRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRI 122
Query: 426 RKEAESCDCLQGFQLTHSLXRXHRFXYGTLL 518
RK A++C LQGF + +++ G+LL
Sbjct: 123 RKLADNCTGLQGFLVFNAVGGGTGSGLGSLL 153
Score = 46.8 bits (106), Expect = 1e-05
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDXHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 240
MRE + I GQ G Q+G WE+ HGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 241 YVXR 252
+V R
Sbjct: 61 HVPR 64
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 72.9 bits (171), Expect = 1e-13
Identities = 36/91 (39%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Frame = +3
Query: 249 PR-ILVXLEPGTMDSVRSGPFGQIFRPDNFXFXQXGAGNNWAKGHYTEGAXLVDSVIDVV 425
PR + V LEP +D VR+G + Q+F P+ + A NN+A+GHYT G +VD +D +
Sbjct: 63 PRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRI 122
Query: 426 RKEAESCDCLQGFQLTHSLXRXHRFXYGTLL 518
RK A++C LQGF + +++ G+LL
Sbjct: 123 RKLADNCTGLQGFLVFNAVGGGTGSGLGSLL 153
Score = 46.8 bits (106), Expect = 1e-05
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDXHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 240
MRE + I GQ G Q+G WE+ HGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 241 YVXR 252
+V R
Sbjct: 61 HVPR 64
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 70.9 bits (166), Expect = 6e-13
Identities = 34/91 (37%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Frame = +3
Query: 249 PR-ILVXLEPGTMDSVRSGPFGQIFRPDNFXFXQXGAGNNWAKGHYTEGAXLVDSVIDVV 425
PR + + LEP +D VR+G + Q+F P+ + A NN+A+GHYT G +VD+ ++ +
Sbjct: 63 PRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLERL 122
Query: 426 RKEAESCDCLQGFQLTHSLXRXHRFXYGTLL 518
RK A++C LQGF + +++ G+LL
Sbjct: 123 RKLADNCTGLQGFLVFNAVGGGTGSGLGSLL 153
Score = 52.4 bits (120), Expect = 2e-07
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDXHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 240
MREI+ I GQ G Q+G WE+ HGI P G DS + + N +++E S G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 241 YVXR 252
+V R
Sbjct: 61 HVPR 64
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 61.7 bits (143), Expect = 4e-10
Identities = 28/81 (34%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
Frame = +3
Query: 249 PR-ILVXLEPGTMDSVRSGPFGQIFRPDNFXFXQXG--AGNNWAKGHYTEGAXLVDSVID 419
PR +L+ LEP ++ +++G + ++ +N G AGNNWA G Y +G + + ++D
Sbjct: 62 PRALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASG-YHQGKGVEEEIMD 120
Query: 420 VVRKEAESCDCLQGFQLTHSL 482
++ +EA+ D L+GF L HS+
Sbjct: 121 MIDREADGSDSLEGFVLCHSI 141
Score = 51.2 bits (117), Expect = 5e-07
Identities = 23/61 (37%), Positives = 35/61 (57%)
Frame = +1
Query: 70 REIVHIQAGQCGNQIGAKFWEIISDXHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVX 249
REI+ +Q GQCGNQIG +FW+ + HGI G + +R +V++ +A Y+
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 250 R 252
R
Sbjct: 63 R 63
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +1
Query: 472 HTRSGGXTGSCMAPSXISKIREEYPDRIMNTYSVVPS 582
H+ +GG TGS M + + + Y +++ TYSV P+
Sbjct: 139 HSIAGG-TGSGMGSYLLETLNDRYSKKLVQTYSVFPN 174
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 61.3 bits (142), Expect = 5e-10
Identities = 28/81 (34%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
Frame = +3
Query: 249 PR-ILVXLEPGTMDSVRSGPFGQIFRPDNFXFXQXG--AGNNWAKGHYTEGAXLVDSVID 419
PR +L+ LEP ++ +++G + ++ +N G AGNNWA G Y +G + + ++D
Sbjct: 62 PRALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASG-YHQGKGVEEEIMD 120
Query: 420 VVRKEAESCDCLQGFQLTHSL 482
++ +EA+ D L+GF L HS+
Sbjct: 121 MIDREADGSDSLEGFVLCHSI 141
Score = 51.2 bits (117), Expect = 5e-07
Identities = 23/61 (37%), Positives = 35/61 (57%)
Frame = +1
Query: 70 REIVHIQAGQCGNQIGAKFWEIISDXHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVX 249
REI+ +Q GQCGNQIG +FW+ + HGI G + +R +V++ +A Y+
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 250 R 252
R
Sbjct: 63 R 63
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +1
Query: 472 HTRSGGXTGSCMAPSXISKIREEYPDRIMNTYSVVPS 582
H+ +GG TGS M + + + Y +++ TYSV P+
Sbjct: 139 HSIAGG-TGSGMGSYLLETLNDRYSKKLVQTYSVFPN 174
>At4g37190.1 68417.m05265 expressed protein
Length = 562
Score = 31.5 bits (68), Expect = 0.44
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDXHGI 156
MREIV IQ G+ N +G+ FW + G+
Sbjct: 1 MREIVTIQVGEFANFVGSHFWNFQDELLGL 30
>At2g31580.1 68415.m03858 expressed protein contains Pfam profile:
PF04446 family of unknown function (DUF549)
Length = 567
Score = 31.1 bits (67), Expect = 0.58
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +3
Query: 414 IDVVRKEAESCDCLQGFQLTHS 479
+ VVRKEAE+C+CLQ F ++ S
Sbjct: 5 VGVVRKEAENCNCLQVFFVSGS 26
>At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putative
similar to (1-4)-beta-mannan endohydrolase [Coffea
arabica] GI:10178872, (1-4)-beta-mannan endohydrolase
GB:AAB87859 [Lycopersicon esculentum]; contains Pfam
profile PF00150: Cellulase (glycosyl hydrolase family 5)
Length = 408
Score = 27.5 bits (58), Expect = 7.2
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +1
Query: 73 EIVHIQAGQCGNQIGAKFWEIISD 144
+I++ A + G+ GA FWE+IS+
Sbjct: 346 DIIYASAQKGGSAAGALFWEVISE 369
>At5g24010.1 68418.m02821 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 824
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -1
Query: 499 NRCXRXSECVSWNPWRQSHDSASFRTTSITEST 401
N R SE W P R+ S++ RTT T S+
Sbjct: 437 NNKTRSSESTGWTPLRRFRGSSNSRTTERTVSS 469
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,992,733
Number of Sequences: 28952
Number of extensions: 184806
Number of successful extensions: 427
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 379
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 421
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1190791976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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