Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0078.Seq
(856 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase / c... 149 2e-36
At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase / c... 149 2e-36
At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase, cy... 148 5e-36
At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase / c... 142 3e-34
At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase, pu... 140 1e-33
At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase / c... 140 1e-33
At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase, pu... 138 4e-33
At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase cyc... 133 1e-31
At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase, pu... 133 2e-31
At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase, ch... 132 3e-31
At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase cyc... 116 2e-26
At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase cyc... 116 2e-26
At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase / c... 112 3e-25
At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase, pu... 108 5e-24
At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase cyc... 102 3e-22
At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase, pu... 101 6e-22
At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase, pu... 100 1e-21
At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase, pu... 87 1e-17
At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase cyc... 81 1e-15
At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase cyc... 79 3e-15
At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase cyc... 74 1e-13
At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase cyc... 66 2e-11
At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein, pu... 56 4e-08
At1g74070.1 68414.m08579 peptidyl-prolyl cis-trans isomerase cyc... 49 5e-06
At2g47320.1 68415.m05907 peptidyl-prolyl cis-trans isomerase cyc... 42 7e-04
At5g35100.1 68418.m04153 peptidyl-prolyl cis-trans isomerase cyc... 35 0.060
At3g66654.3 68416.m00779 peptidyl-prolyl cis-trans isomerase cyc... 34 0.10
At3g66654.2 68416.m00778 peptidyl-prolyl cis-trans isomerase cyc... 34 0.10
At3g66654.1 68416.m00777 peptidyl-prolyl cis-trans isomerase cyc... 34 0.10
At4g14805.1 68417.m02276 protease inhibitor/seed storage/lipid t... 31 0.74
At1g50520.1 68414.m05667 cytochrome P450 family protein similar ... 31 0.98
At1g23090.1 68414.m02887 sulfate transporter, putative similar t... 29 3.9
At1g72540.1 68414.m08388 protein kinase, putative similar to aux... 28 9.1
>At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase /
cyclophilin / rotamase / cyclosporin A-binding protein
(ROC1) identical to SP|P34790 Peptidyl-prolyl cis-trans
isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin)
(Cyclosporin A-binding protein) {Arabidopsis thaliana}
Length = 172
Score = 149 bits (362), Expect = 2e-36
Identities = 71/109 (65%), Positives = 80/109 (73%)
Frame = +3
Query: 183 LRLQGLHFPSCHPQFHAARRGLHQHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 362
L +G F P F NGTGG+SIYG+KFEDENF KHTGPG+LSMANAGA
Sbjct: 53 LHFKGSKFHRVIPNFMCQGGDFTAGNGTGGESIYGSKFEDENFERKHTGPGILSMANAGA 112
Query: 363 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSK 509
+TNGSQFFI TVKT WLDG+HVVFG VVEG++VVK IE GS SGK +K
Sbjct: 113 NTNGSQFFICTVKTDWLDGKHVVFGQVVEGLDVVKAIEKVGSSSGKPTK 161
Score = 103 bits (248), Expect = 1e-22
Identities = 48/75 (64%), Positives = 58/75 (77%), Gaps = 7/75 (9%)
Frame = +1
Query: 49 MSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIF 207
M+ P+V+FD+T+D P G+IV+EL +D TP+T ENFRALCTGEKG G +KGS F
Sbjct: 1 MAFPKVYFDMTIDGQPAGRIVMELYTDKTPRTAENFRALCTGEKGVGGTGKPLHFKGSKF 60
Query: 208 HRVIPNFMLQGGDFT 252
HRVIPNFM QGGDFT
Sbjct: 61 HRVIPNFMCQGGDFT 75
>At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP2) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443757|gb|AAB71402; similar
to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34790
Length = 174
Score = 149 bits (362), Expect = 2e-36
Identities = 71/109 (65%), Positives = 80/109 (73%)
Frame = +3
Query: 183 LRLQGLHFPSCHPQFHAARRGLHQHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 362
L +G F P F + NGTGG+SIYG KFEDENF KHTGPG+LSMANAGA
Sbjct: 54 LHFKGSSFHRVIPNFMCQGGDFTKGNGTGGESIYGAKFEDENFERKHTGPGILSMANAGA 113
Query: 363 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSK 509
+TNGSQFFI TVKT WLDG+HVVFG VVEG++VVK IE GS SGK +K
Sbjct: 114 NTNGSQFFICTVKTDWLDGKHVVFGQVVEGLDVVKAIEKIGSSSGKPTK 162
Score = 105 bits (252), Expect = 4e-23
Identities = 52/80 (65%), Positives = 58/80 (72%), Gaps = 7/80 (8%)
Frame = +1
Query: 52 SLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFH 210
S P+VFFD+T+ AP GKIV+EL +D TPKT ENFRALCTGEKG G +KGS FH
Sbjct: 3 SHPKVFFDMTIGGAPAGKIVMELYTDKTPKTAENFRALCTGEKGVGRSGKPLHFKGSSFH 62
Query: 211 RVIPNFMLQGGDFTNITALG 270
RVIPNFM QGGDFT G
Sbjct: 63 RVIPNFMCQGGDFTKGNGTG 82
>At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase,
cytosolic / cyclophilin / rotamase (ROC3) identical to
cytosolic cyclophilin [Arabidopsis thaliana] GI:1305455
Length = 173
Score = 148 bits (358), Expect = 5e-36
Identities = 70/109 (64%), Positives = 81/109 (74%)
Frame = +3
Query: 183 LRLQGLHFPSCHPQFHAARRGLHQHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 362
L +G F P+F NGTGG+SIYG+KF+DENF KHTGPG+LSMANAGA
Sbjct: 54 LHYKGSSFHRVIPKFMCQGGDFTAGNGTGGESIYGSKFKDENFIKKHTGPGILSMANAGA 113
Query: 363 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSK 509
+TNGSQFFI T KTSWLDG+HVVFG VVEG+ VV+ IE GS SG+TSK
Sbjct: 114 NTNGSQFFICTEKTSWLDGKHVVFGQVVEGLNVVRDIEKVGSDSGRTSK 162
Score = 95.1 bits (226), Expect = 5e-20
Identities = 45/72 (62%), Positives = 53/72 (73%), Gaps = 7/72 (9%)
Frame = +1
Query: 58 PRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFHRV 216
P+V+FD+TV G+IV+EL +D TP+T ENFRALCTGE+G G YKGS FHRV
Sbjct: 5 PKVYFDMTVGGKSAGRIVMELYADTTPETAENFRALCTGERGIGKQGKPLHYKGSSFHRV 64
Query: 217 IPNFMLQGGDFT 252
IP FM QGGDFT
Sbjct: 65 IPKFMCQGGDFT 76
>At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP5) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443755|gb|AAB71401
Length = 201
Score = 142 bits (344), Expect = 3e-34
Identities = 69/105 (65%), Positives = 75/105 (71%)
Frame = +3
Query: 183 LRLQGLHFPSCHPQFHAARRGLHQHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 362
L +G F P F NG GG+SIYG KF DENF LKHTGPGVLSMAN+G
Sbjct: 81 LHYKGSKFHRIIPSFMIQGGDFTHGNGMGGESIYGQKFADENFKLKHTGPGVLSMANSGE 140
Query: 363 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSG 497
DTNGSQFFITTV TSWLDGRHVVFG VV+GM+VV +IE G QSG
Sbjct: 141 DTNGSQFFITTVTTSWLDGRHVVFGKVVQGMDVVYKIEAEGKQSG 185
Score = 91.1 bits (216), Expect = 9e-19
Identities = 43/77 (55%), Positives = 53/77 (68%), Gaps = 7/77 (9%)
Frame = +1
Query: 61 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFHRVI 219
+V+FDV +D G++VI L PKT ENFRALCTGEKG G YKGS FHR+I
Sbjct: 33 KVYFDVEIDGKSAGRVVIGLFGKAVPKTAENFRALCTGEKGVGKSGKPLHYKGSKFHRII 92
Query: 220 PNFMLQGGDFTNITALG 270
P+FM+QGGDFT+ +G
Sbjct: 93 PSFMIQGGDFTHGNGMG 109
>At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
(ROC7) similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 204
Score = 140 bits (339), Expect = 1e-33
Identities = 68/105 (64%), Positives = 74/105 (70%)
Frame = +3
Query: 183 LRLQGLHFPSCHPQFHAARRGLHQHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 362
L +G F P F NG GG+SIYG KF DENF LKHTGPG LSMANAG
Sbjct: 84 LHYKGSSFHRIIPSFMLQGGDFTHGNGMGGESIYGEKFADENFKLKHTGPGFLSMANAGQ 143
Query: 363 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSG 497
DTNGSQFFITTV TSWLDGRHVVFG VV GM+VV ++E G+QSG
Sbjct: 144 DTNGSQFFITTVTTSWLDGRHVVFGKVVTGMDVVYKVEAEGNQSG 188
Score = 91.5 bits (217), Expect = 7e-19
Identities = 44/77 (57%), Positives = 53/77 (68%), Gaps = 7/77 (9%)
Frame = +1
Query: 61 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFHRVI 219
+V+FDV +D G+IV+ L PKT ENFRALCTGEKG G YKGS FHR+I
Sbjct: 36 KVYFDVEIDGKAAGRIVMGLFGKTVPKTVENFRALCTGEKGIGKNGKALHYKGSSFHRII 95
Query: 220 PNFMLQGGDFTNITALG 270
P+FMLQGGDFT+ +G
Sbjct: 96 PSFMLQGGDFTHGNGMG 112
>At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP1) / rotamase identical to cyclophilin
(CYP1) gi|992643|gb|AAA75512; similar to peptidyl-prolyl
cis-trans isomerase, PPIase (cyclophilin, cyclosporin
A-binding protein) [Catharanthus roseus]
SWISS-PROT:Q39613
Length = 172
Score = 140 bits (338), Expect = 1e-33
Identities = 68/109 (62%), Positives = 78/109 (71%)
Frame = +3
Query: 183 LRLQGLHFPSCHPQFHAARRGLHQHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 362
L +G F P F NGTGG+SIYG KF+DENF KHTG G+LSMAN+G
Sbjct: 53 LHFKGSIFHRVIPGFMCQGGDFTAKNGTGGESIYGAKFKDENFIKKHTGAGILSMANSGP 112
Query: 363 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSK 509
+TNGSQFFI T KTSWLDG+HVVFG VV+G++VVK IE GS SGKTSK
Sbjct: 113 NTNGSQFFICTDKTSWLDGKHVVFGQVVKGLDVVKAIEKVGSDSGKTSK 161
Score = 101 bits (241), Expect = 8e-22
Identities = 48/75 (64%), Positives = 56/75 (74%), Gaps = 7/75 (9%)
Frame = +1
Query: 49 MSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIF 207
MS PRVFFD+++ P+G+I +EL +D TP T ENFRALCTGEKG G +KGSIF
Sbjct: 1 MSNPRVFFDMSLSGTPIGRIEMELFADTTPNTAENFRALCTGEKGMGKLGKPLHFKGSIF 60
Query: 208 HRVIPNFMLQGGDFT 252
HRVIP FM QGGDFT
Sbjct: 61 HRVIPGFMCQGGDFT 75
>At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Catharanthus roseus] SWISS-PROT:Q39613
Length = 176
Score = 138 bits (334), Expect = 4e-33
Identities = 66/109 (60%), Positives = 77/109 (70%)
Frame = +3
Query: 183 LRLQGLHFPSCHPQFHAARRGLHQHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 362
L +G F P F + NGTGG+SIYG+KFEDENF LKHTGPG+LSMAN+G
Sbjct: 53 LHYKGSAFHRIIPGFMCQGGDFTRGNGTGGESIYGSKFEDENFKLKHTGPGILSMANSGP 112
Query: 363 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSK 509
+TNGSQFFI T KTSWLDG+HVVFG VV+G VVK +E GS G S+
Sbjct: 113 NTNGSQFFICTEKTSWLDGKHVVFGKVVDGYNVVKAMEDVGSDMGNPSE 161
Score = 94.3 bits (224), Expect = 9e-20
Identities = 44/81 (54%), Positives = 54/81 (66%), Gaps = 7/81 (8%)
Frame = +1
Query: 49 MSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIF 207
M+ P+VFFD+ + G++V+EL +DVTP+T NFRALCTGE G G YKGS F
Sbjct: 1 MANPKVFFDILIGKMKAGRVVMELFADVTPRTANNFRALCTGENGIGKAGKALHYKGSAF 60
Query: 208 HRVIPNFMLQGGDFTNITALG 270
HR+IP FM QGGDFT G
Sbjct: 61 HRIIPGFMCQGGDFTRGNGTG 81
>At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 259
Score = 133 bits (322), Expect = 1e-31
Identities = 60/87 (68%), Positives = 69/87 (79%)
Frame = +3
Query: 258 NGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFG 437
NGTGGKS+YG F+DENF L H GPGVLSMANAG +TNGSQFFI T+KTSWLDGRHVVFG
Sbjct: 160 NGTGGKSVYGRTFKDENFKLSHVGPGVLSMANAGPNTNGSQFFICTIKTSWLDGRHVVFG 219
Query: 438 NVVEGMEVVKQIETFGSQSGKTSKESL 518
V+EGMEVVK IE + G ++ +
Sbjct: 220 QVIEGMEVVKLIEEQETDRGDRPRKKV 246
Score = 90.2 bits (214), Expect = 2e-18
Identities = 44/67 (65%), Positives = 53/67 (79%), Gaps = 4/67 (5%)
Frame = +1
Query: 61 RVFFDVTVDDAPLGK----IVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNF 228
+V+FD++V + P+GK IVI L D P+T ENFRALCTGEKGFGYKGS FHRVI +F
Sbjct: 91 KVYFDISVGN-PVGKLAGRIVIGLYGDDVPQTVENFRALCTGEKGFGYKGSTFHRVIRDF 149
Query: 229 MLQGGDF 249
M+QGGDF
Sbjct: 150 MIQGGDF 156
>At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 228
Score = 133 bits (321), Expect = 2e-31
Identities = 64/105 (60%), Positives = 74/105 (70%)
Frame = +3
Query: 183 LRLQGLHFPSCHPQFHAARRGLHQHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 362
L +G F P F + +G GG+SIYG+KF DENF LKHTGPG LSMAN+G
Sbjct: 108 LYFKGSSFHRIIPGFMIQGGDFTRGDGRGGESIYGDKFADENFKLKHTGPGFLSMANSGP 167
Query: 363 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSG 497
D+NGSQFFITTV TSWLDG HVVFG V+ GMEVV++IE G SG
Sbjct: 168 DSNGSQFFITTVTTSWLDGHHVVFGKVLSGMEVVRKIEAQGQDSG 212
Score = 89.0 bits (211), Expect = 3e-18
Identities = 39/71 (54%), Positives = 53/71 (74%), Gaps = 7/71 (9%)
Frame = +1
Query: 61 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFHRVI 219
+V+FD+ ++ +P G+I+I L ++ PKT ENFR+LCTGEKG G +KGS FHR+I
Sbjct: 60 KVYFDIQINGSPAGRILIGLFGNIVPKTAENFRSLCTGEKGVGNMGKPLYFKGSSFHRII 119
Query: 220 PNFMLQGGDFT 252
P FM+QGGDFT
Sbjct: 120 PGFMIQGGDFT 130
>At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase,
chloroplast / cyclophilin / rotamase / cyclosporin
A-binding protein (ROC4) identical to peptidyl-prolyl
cis-trans isomerase, chloroplast precursor, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34791; identical to
cDNA nuclear-encoded chloroplast stromal cyclophilin
(ROC4) GI:405130
Length = 260
Score = 132 bits (319), Expect = 3e-31
Identities = 58/74 (78%), Positives = 67/74 (90%)
Frame = +3
Query: 258 NGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFG 437
NGTGG SIYG KFEDENFTLKHTGPG+LSMANAG +TNGSQFFI TVKTSWLD +HVVFG
Sbjct: 162 NGTGGISIYGAKFEDENFTLKHTGPGILSMANAGPNTNGSQFFICTVKTSWLDNKHVVFG 221
Query: 438 NVVEGMEVVKQIET 479
V+EGM++V+ +E+
Sbjct: 222 QVIEGMKLVRTLES 235
Score = 92.7 bits (220), Expect = 3e-19
Identities = 41/70 (58%), Positives = 51/70 (72%)
Frame = +1
Query: 61 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQG 240
+V+FDV + G+IV+ L +V PKT ENFRALCTGEK +GYKGS FHR+I +FM+QG
Sbjct: 96 KVYFDVEIGGEVAGRIVMGLFGEVVPKTVENFRALCTGEKKYGYKGSSFHRIIKDFMIQG 155
Query: 241 GDFTNITALG 270
GDFT G
Sbjct: 156 GDFTEGNGTG 165
>At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 387
Score = 116 bits (280), Expect = 2e-26
Identities = 58/106 (54%), Positives = 67/106 (63%)
Frame = +3
Query: 183 LRLQGLHFPSCHPQFHAARRGLHQHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 362
L +G F F A NGTGG+SIYG KF DENF L H G GVLSMAN G
Sbjct: 57 LHFKGSSFHRVIKGFMAQGGDFSNGNGTGGESIYGGKFSDENFRLDHDGAGVLSMANCGP 116
Query: 363 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGK 500
+TNGSQFFI + LDG+HVVFG VVEGM V+K++E G+ GK
Sbjct: 117 NTNGSQFFILFKRQPHLDGKHVVFGKVVEGMAVIKKMELVGTSDGK 162
Score = 89.0 bits (211), Expect = 3e-18
Identities = 46/83 (55%), Positives = 53/83 (63%), Gaps = 8/83 (9%)
Frame = +1
Query: 46 KMSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG--------YKGS 201
K P VF DV++ P+ +IVIEL +DV PKT ENFRALCTGE G G +KGS
Sbjct: 3 KKKNPNVFLDVSIGGDPVQRIVIELFADVVPKTAENFRALCTGEAGVGKSTGKPLHFKGS 62
Query: 202 IFHRVIPNFMLQGGDFTNITALG 270
FHRVI FM QGGDF+N G
Sbjct: 63 SFHRVIKGFMAQGGDFSNGNGTG 85
>At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 570
Score = 116 bits (280), Expect = 2e-26
Identities = 58/106 (54%), Positives = 67/106 (63%)
Frame = +3
Query: 183 LRLQGLHFPSCHPQFHAARRGLHQHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 362
L +G F F A NGTGG+SIYG KF DENF L H G GVLSMAN G
Sbjct: 57 LHFKGSSFHRVIKGFMAQGGDFSNGNGTGGESIYGGKFSDENFRLDHDGAGVLSMANCGP 116
Query: 363 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGK 500
+TNGSQFFI + LDG+HVVFG VVEGM V+K++E G+ GK
Sbjct: 117 NTNGSQFFILFKRQPHLDGKHVVFGKVVEGMAVIKKMELVGTSDGK 162
Score = 89.0 bits (211), Expect = 3e-18
Identities = 46/83 (55%), Positives = 53/83 (63%), Gaps = 8/83 (9%)
Frame = +1
Query: 46 KMSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG--------YKGS 201
K P VF DV++ P+ +IVIEL +DV PKT ENFRALCTGE G G +KGS
Sbjct: 3 KKKNPNVFLDVSIGGDPVQRIVIELFADVVPKTAENFRALCTGEAGVGKSTGKPLHFKGS 62
Query: 202 IFHRVIPNFMLQGGDFTNITALG 270
FHRVI FM QGGDF+N G
Sbjct: 63 SFHRVIKGFMAQGGDFSNGNGTG 85
>At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase /
cyclophilin-40 (CYP40) / rotamase identical to
cyclophilin-40 [Arabidopsis thaliana] GI:13442983;
supporting cDNA gi|13442982|gb|AY026065.1|
Length = 361
Score = 112 bits (269), Expect = 3e-25
Identities = 51/74 (68%), Positives = 62/74 (83%)
Frame = +3
Query: 255 HNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVF 434
++GTGG+SIYG KF+DENF LKH G+LSMAN+G +TNGSQFFITT +TS LDG+HVVF
Sbjct: 78 NDGTGGESIYGLKFDDENFELKHERKGMLSMANSGPNTNGSQFFITTTRTSHLDGKHVVF 137
Query: 435 GNVVEGMEVVKQIE 476
G V +GM VV+ IE
Sbjct: 138 GRVTKGMGVVRSIE 151
Score = 80.2 bits (189), Expect = 2e-15
Identities = 44/85 (51%), Positives = 52/85 (61%), Gaps = 9/85 (10%)
Frame = +1
Query: 49 MSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG--------YKGSI 204
M + F D+++ G+IVIEL DV PKT ENFR LCTGEKG G YKG+
Sbjct: 1 MGRSKCFMDISIGGELEGRIVIELYDDVVPKTAENFRLLCTGEKGLGPNTGVPLHYKGNR 60
Query: 205 FHRVIPNFMLQGGDFT-NITALGES 276
FHRVI FM+QGGD + N GES
Sbjct: 61 FHRVIKGFMIQGGDISANDGTGGES 85
>At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Homo sapiens]
gi|3647230|gb|AAC60793
Length = 199
Score = 108 bits (259), Expect = 5e-24
Identities = 48/76 (63%), Positives = 63/76 (82%), Gaps = 1/76 (1%)
Frame = +3
Query: 252 QHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVV 431
+++G+G SIYG+KFEDENFT KHTGPG+LSMAN+G +TNG QFFIT K WLD +HVV
Sbjct: 102 KNDGSGCMSIYGHKFEDENFTAKHTGPGLLSMANSGPNTNGCQFFITCAKCDWLDNKHVV 161
Query: 432 FGNVV-EGMEVVKQIE 476
FG V+ +G+ V+++IE
Sbjct: 162 FGRVLGDGLLVMRKIE 177
Score = 78.6 bits (185), Expect = 5e-15
Identities = 38/69 (55%), Positives = 46/69 (66%), Gaps = 5/69 (7%)
Frame = +1
Query: 58 PRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGE-----KGFGYKGSIFHRVIP 222
P VFFDV++ P G+I +EL +D+ PKT ENFR CTGE K GYK FHRVI
Sbjct: 32 PVVFFDVSIGGIPAGRIKMELFADIAPKTAENFRQFCTGELRKAGKPLGYKECQFHRVIK 91
Query: 223 NFMLQGGDF 249
+FM+Q GDF
Sbjct: 92 DFMVQSGDF 100
>At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to SP|P87051
Peptidyl-prolyl cis-trans isomerase cyp2 (EC 5.2.1.8)
(Cyclophilin cyp2) {Schizosaccharomyces pombe}; contains
Pfam profiles PF00160: peptidyl-prolyl cis-trans
isomerase cyclophilin-type, PF00400: WD domain G-beta
repeat
Length = 631
Score = 102 bits (244), Expect = 3e-22
Identities = 48/74 (64%), Positives = 60/74 (81%), Gaps = 1/74 (1%)
Frame = +3
Query: 258 NGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVF 434
+GTGG+SI+G +FEDE + +L+H P LSMANAG +TNGSQFFITTV T WLD +H VF
Sbjct: 534 DGTGGQSIWGREFEDEFHKSLRHDRPFTLSMANAGPNTNGSQFFITTVATPWLDNKHTVF 593
Query: 435 GNVVEGMEVVKQIE 476
G VV+GM+VV+ IE
Sbjct: 594 GRVVKGMDVVQGIE 607
Score = 44.0 bits (99), Expect = 1e-04
Identities = 28/72 (38%), Positives = 37/72 (51%)
Frame = +1
Query: 31 IANTGKMSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFH 210
I N+ SLP + + LG I ++L + PKT ENF C G+ Y +FH
Sbjct: 466 IGNSATTSLP----ENVIMHTTLGDIHMKLYPEECPKTVENFTTHC--RNGY-YDNHLFH 518
Query: 211 RVIPNFMLQGGD 246
RVI FM+Q GD
Sbjct: 519 RVIRGFMIQTGD 530
>At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
contains Pfam domain, PF00160: peptidyl-prolyl cis-trans
isomerase, cyclophilin-type
Length = 164
Score = 101 bits (242), Expect = 6e-22
Identities = 47/72 (65%), Positives = 56/72 (77%), Gaps = 1/72 (1%)
Frame = +3
Query: 261 GTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFG 437
G GG+SIYG+KFEDE N LKHTG G+LSMANAG +TNGSQFFIT LDG+H +FG
Sbjct: 69 GRGGESIYGSKFEDEINKELKHTGAGILSMANAGPNTNGSQFFITLAPQPSLDGKHTIFG 128
Query: 438 NVVEGMEVVKQI 473
V GMEV+K++
Sbjct: 129 RVCRGMEVIKRL 140
Score = 46.8 bits (106), Expect = 2e-05
Identities = 24/68 (35%), Positives = 41/68 (60%)
Frame = +1
Query: 73 DVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFT 252
+VT++ + +G +E+ +P+TC NF L +G+ Y +FHR++ +F++QGGD T
Sbjct: 11 EVTLETS-MGPFTVEMYYKHSPRTCRNFLEL--SRRGY-YDNVLFHRIVKDFIVQGGDPT 66
Query: 253 NITALGES 276
GES
Sbjct: 67 GTGRGGES 74
>At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 224
Score = 100 bits (240), Expect = 1e-21
Identities = 47/86 (54%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Frame = +3
Query: 258 NGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFG 437
+G SIYG F DENF ++H+ G+++MAN G D+NGSQFFITTVK SWL+G HVV G
Sbjct: 121 DGKSSDSIYGGTFPDENFKIQHSHAGMVAMANTGPDSNGSQFFITTVKASWLEGEHVVLG 180
Query: 438 NVVEGMEVVKQIE-TFGSQSGKTSKE 512
V++GM+ V IE G+ SGK K+
Sbjct: 181 KVIQGMDNVFAIEGGAGTYSGKPRKK 206
Score = 79.0 bits (186), Expect = 4e-15
Identities = 40/69 (57%), Positives = 46/69 (66%), Gaps = 7/69 (10%)
Frame = +1
Query: 61 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKG-------FGYKGSIFHRVI 219
RVF DV +D LG+IVI L V PKT ENFRALCTGEKG YKG+ FHR+I
Sbjct: 48 RVFLDVDIDGQRLGRIVIGLYGTVVPKTVENFRALCTGEKGKTSSGKPLHYKGTPFHRII 107
Query: 220 PNFMLQGGD 246
F++QGGD
Sbjct: 108 SGFVIQGGD 116
>At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase PPIase
(cyclophilin, cyclosporin A-binding protein) [Tomato]
SWISS-PROT:P21568
Length = 232
Score = 87.4 bits (207), Expect = 1e-17
Identities = 41/73 (56%), Positives = 52/73 (71%), Gaps = 7/73 (9%)
Frame = +1
Query: 49 MSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIF 207
M+ P+VFFD+TVD P G+IVIEL +D+TP+T ENFR LCTGE+G G YKGS F
Sbjct: 1 MANPKVFFDLTVDGKPAGRIVIELFADLTPRTAENFRGLCTGERGIGKCGKPIHYKGSTF 60
Query: 208 HRVIPNFMLQGGD 246
++P+ M GGD
Sbjct: 61 DHIVPDLMWCGGD 73
Score = 54.8 bits (126), Expect = 7e-08
Identities = 31/68 (45%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
Frame = +3
Query: 279 IYGNKFEDENFTLKHT-GPGVLSMANAGADTNGSQFFITTVKTSW-LDGRHVVFGNVVEG 452
I+ + +DE F L H GPG++SMA D+NGSQF I +DG HVV G VVEG
Sbjct: 81 IHSEELDDEYFILNHEDGPGIISMA----DSNGSQFQIHMKDYGLQVDGDHVVIGKVVEG 136
Query: 453 MEVVKQIE 476
+++++ IE
Sbjct: 137 LDLMRNIE 144
>At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 160
Score = 80.6 bits (190), Expect = 1e-15
Identities = 39/73 (53%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Frame = +3
Query: 261 GTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFG 437
G GG SI+G KF DE +LKH G+LSMAN+G +TNGSQFFIT K L+G + +FG
Sbjct: 60 GKGGTSIWGKKFNDEIRDSLKHNARGMLSMANSGPNTNGSQFFITYAKQPHLNGLYTIFG 119
Query: 438 NVVEGMEVVKQIE 476
V+ G EV+ +E
Sbjct: 120 KVIHGFEVLDIME 132
Score = 52.0 bits (119), Expect = 5e-07
Identities = 27/50 (54%), Positives = 32/50 (64%)
Frame = +1
Query: 97 LGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGD 246
LG I E+ D PK+ ENF ALC G+ Y G+IFHR I FM+QGGD
Sbjct: 9 LGDIKCEIFCDEVPKSAENFLALCAS--GY-YDGTIFHRNIKGFMIQGGD 55
>At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein weak similarity to
CARS-Cyp [Homo sapiens] GI:1117968; contains Pfam
profile PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 837
Score = 79.4 bits (187), Expect = 3e-15
Identities = 40/78 (51%), Positives = 47/78 (60%), Gaps = 8/78 (10%)
Frame = +1
Query: 46 KMSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG--------YKGS 201
K P+VF DV++D P +V EL +V PKT ENFRALCTGEKG G YKGS
Sbjct: 3 KKKNPQVFMDVSIDGDPAETMVFELFPEVAPKTSENFRALCTGEKGIGPRSGKPLHYKGS 62
Query: 202 IFHRVIPNFMLQGGDFTN 255
FHR++ Q GDF N
Sbjct: 63 FFHRIMKGSSAQAGDFVN 80
Score = 78.6 bits (185), Expect = 5e-15
Identities = 38/81 (46%), Positives = 51/81 (62%)
Frame = +3
Query: 258 NGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFG 437
NGT G+SIY KF DE+ L+H G+LSM+ A D GS F IT LD +VVFG
Sbjct: 82 NGTAGESIYAGKFPDESPKLRHEETGLLSMSIADRDKFGSHFHITFRPNQQLDRNNVVFG 141
Query: 438 NVVEGMEVVKQIETFGSQSGK 500
+++G E++K+IE G + GK
Sbjct: 142 KLIQGKEILKKIERVGDEEGK 162
>At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 595
Score = 74.1 bits (174), Expect = 1e-13
Identities = 36/73 (49%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Frame = +3
Query: 261 GTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFG 437
G GG+SI+G F+DE N L H+G GV+SMAN+G TNGSQFF+ + L+ +H VFG
Sbjct: 403 GKGGESIWGKPFKDEPNSKLLHSGRGVVSMANSGPHTNGSQFFVLYKSATHLNYKHTVFG 462
Query: 438 NVVEGMEVVKQIE 476
VV G+ + +E
Sbjct: 463 GVVGGLATLAAME 475
Score = 60.9 bits (141), Expect = 1e-09
Identities = 31/59 (52%), Positives = 37/59 (62%)
Frame = +1
Query: 100 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNITALGES 276
G + IEL D+ P+ CENF LC E+G+ Y G FHR I NFM+QGGD T GES
Sbjct: 353 GDLNIELHCDIAPRACENFITLC--ERGY-YNGVAFHRSIRNFMIQGGDPTGTGKGGES 408
>At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 504
Score = 66.5 bits (155), Expect = 2e-11
Identities = 32/64 (50%), Positives = 44/64 (68%), Gaps = 2/64 (3%)
Frame = +3
Query: 258 NGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGA-DTNGSQFFITTVKTSWLDGRHVV 431
+GTGG SIYG F DE + L+ + G+++MANA + ++NGSQFF T K WLD +H +
Sbjct: 71 SGTGGDSIYGGVFADEFHSRLRFSHRGIVAMANASSPNSNGSQFFFTLDKCDWLDKKHTI 130
Query: 432 FGNV 443
FG V
Sbjct: 131 FGKV 134
Score = 47.2 bits (107), Expect = 1e-05
Identities = 26/59 (44%), Positives = 35/59 (59%)
Frame = +1
Query: 100 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNITALGES 276
G I +EL PK+ NF LC +G+ + +IFHRVIP F++QGGD T G+S
Sbjct: 22 GPIDVELWPKEAPKSVRNFVQLCL--EGY-FDNTIFHRVIPGFLVQGGDPTGSGTGGDS 77
>At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein,
putative
Length = 506
Score = 55.6 bits (128), Expect = 4e-08
Identities = 40/120 (33%), Positives = 61/120 (50%), Gaps = 15/120 (12%)
Frame = +3
Query: 159 CPVHWRERLRL------QGLHFPSCHPQFHAARRGLHQHNGTGGKSIY----GNK---FE 299
CP+ + L+L G F + F A+ G G GG SIY G + ++
Sbjct: 21 CPLTCKNFLKLCKIKYYNGCLFHTVQKDF-TAQTGDPTGTGAGGDSIYKFLYGEQARFYK 79
Query: 300 DE-NFTLKHTGPGVLSMANAGADTNGSQFFIT-TVKTSWLDGRHVVFGNVVEGMEVVKQI 473
DE + LKH+ G ++MA+ G + N SQF+ T +LDG+H VFG + EG + + +I
Sbjct: 80 DEIHLDLKHSKTGTVAMASGGENLNASQFYFTLRDDLDYLDGKHTVFGQIAEGFDTLTRI 139
Score = 49.6 bits (113), Expect = 3e-06
Identities = 29/60 (48%), Positives = 34/60 (56%)
Frame = +1
Query: 97 LGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNITALGES 276
LG IVI+L SD P TC+NF LC K Y G +FH V +F Q GD T A G+S
Sbjct: 9 LGDIVIDLHSDKCPLTCKNFLKLC---KIKYYNGCLFHTVQKDFTAQTGDPTGTGAGGDS 65
>At1g74070.1 68414.m08579 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 317
Score = 48.8 bits (111), Expect = 5e-06
Identities = 19/61 (31%), Positives = 35/61 (57%)
Frame = +1
Query: 61 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQG 240
+ F DV++D P+G+I+I L D P F ++ +G+ G Y+ F +++P ++ G
Sbjct: 93 KAFIDVSIDGEPIGRIIIGLYGDDVPAGTARFSSIVSGKAGITYRRKDFVKIMPGYVQHG 152
Query: 241 G 243
G
Sbjct: 153 G 153
Score = 33.5 bits (73), Expect = 0.18
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +3
Query: 369 NGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTS 506
NG++F IT V + L+ +V G V+EGM VV+++ + TS
Sbjct: 230 NGTEFVITAVDSPELEDSVLVIGKVLEGMGVVEKMREVKTVRDNTS 275
>At2g47320.1 68415.m05907 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 230
Score = 41.5 bits (93), Expect = 7e-04
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = +1
Query: 88 DAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNITAL 267
D G + IEL D P + F C + G+ +KG +F RV+ +F++Q GD A+
Sbjct: 83 DTGKGSVTIELFKDTAPNVVDQFMKFC--QDGY-FKGFLFSRVVKHFVIQAGDSAEFDAV 139
Score = 32.7 bits (71), Expect = 0.32
Identities = 18/55 (32%), Positives = 31/55 (56%)
Frame = +3
Query: 312 TLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 476
+LKH ++ A + G +FFI + + L+ + VFG V +G +VV++IE
Sbjct: 152 SLKHE-EFMVGTPKAKNEQGGFEFFIVSAQIKDLNEKLTVFGRVSKGQDVVQEIE 205
>At5g35100.1 68418.m04153 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 290
Score = 35.1 bits (77), Expect = 0.060
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +1
Query: 85 DDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIP-NFMLQG 240
D PLG++V+ L P T F+ +CT YK + H++ P + L G
Sbjct: 81 DSTPLGRVVLGLYGRHVPITVSTFKRMCT-SSSTSYKNTPVHKIFPGQYFLAG 132
Score = 32.7 bits (71), Expect = 0.32
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +3
Query: 363 DTNGSQFFITTVK--TSWLDGRHVVFGNVVEGMEVVKQIET 479
D +F ITT + LDG ++VFG V+EG++VV I +
Sbjct: 191 DYRNVEFLITTGPGPSPQLDGGNIVFGTVLEGLDVVTSISS 231
>At3g66654.3 68416.m00779 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 34.3 bits (75), Expect = 0.10
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +1
Query: 100 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGG 243
G I +EL + +P+ + F LC + +KG F RVI N+++Q G
Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQKDH---FKGMPFQRVIKNYLVQAG 134
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +3
Query: 378 QFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 476
+ ITT L+ + +VFG V++G +VV++IE
Sbjct: 179 ELLITTAPIPDLNDQLIVFGRVLKGEDVVQEIE 211
>At3g66654.2 68416.m00778 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 34.3 bits (75), Expect = 0.10
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +1
Query: 100 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGG 243
G I +EL + +P+ + F LC + +KG F RVI N+++Q G
Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQKDH---FKGMPFQRVIKNYLVQAG 134
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +3
Query: 378 QFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 476
+ ITT L+ + +VFG V++G +VV++IE
Sbjct: 179 ELLITTAPIPDLNDQLIVFGRVLKGEDVVQEIE 211
>At3g66654.1 68416.m00777 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 34.3 bits (75), Expect = 0.10
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +1
Query: 100 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGG 243
G I +EL + +P+ + F LC + +KG F RVI N+++Q G
Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQKDH---FKGMPFQRVIKNYLVQAG 134
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +3
Query: 378 QFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 476
+ ITT L+ + +VFG V++G +VV++IE
Sbjct: 179 ELLITTAPIPDLNDQLIVFGRVLKGEDVVQEIE 211
>At4g14805.1 68417.m02276 protease inhibitor/seed storage/lipid
transfer protein (LTP)-related weak hit to Pfam PF00234:
Protease inhibitor/seed storage/LTP family
Length = 219
Score = 31.5 bits (68), Expect = 0.74
Identities = 21/60 (35%), Positives = 32/60 (53%)
Frame = -1
Query: 475 SICLTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCLRVKFSSS 296
++ T PS++ P TC ++E+ V+ P VS+P M TP P+C V F+SS
Sbjct: 22 AVTATQQAPSSSPPVLTC---TEEL--VMFSPCLPYVSSPPNNMSETPDPICCSV-FTSS 75
>At1g50520.1 68414.m05667 cytochrome P450 family protein similar to
CYTOCHROME P450 93A3 GB:O81973 from [Glycine max]
Length = 533
Score = 31.1 bits (67), Expect = 0.98
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
Frame = +1
Query: 157 RALCTGEK-GFGYKGSIFHRVIPNF-MLQGGDFTNITALGESPST-AISLK----TRISP 315
R C GEK G+ + G ++ F + GD N+ GE T A LK TR++P
Sbjct: 454 RRACPGEKLGYLFTGVAIGTMVQCFDWIIDGDKVNVEEAGEMTLTMAHPLKCTPVTRVNP 513
Query: 316 LSTLDLASSPWLM 354
L++ + WLM
Sbjct: 514 LASFESEDPKWLM 526
>At1g23090.1 68414.m02887 sulfate transporter, putative similar to
sulfate transporter [Arabidopsis thaliana] GI:2285885;
contains Pfam profiles PF00916: Sulfate transporter
family, PF01740: STAS domain
Length = 631
Score = 29.1 bits (62), Expect = 3.9
Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Frame = +3
Query: 297 EDENFTLKHTGPGVLSM---ANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVK 467
E+E KH+ L + A +G DTNG FF KT+ +VF N + EVV+
Sbjct: 536 EEEEAQEKHSSLQFLILEMSAVSGVDTNGVSFFKELKKTTAKKDIELVFVNPLS--EVVE 593
Query: 468 QIETFGSQSGKTSKESLSKTV 530
+++ Q E L TV
Sbjct: 594 KLQRADEQKEFMRPEFLFLTV 614
>At1g72540.1 68414.m08388 protein kinase, putative similar to
auxin-regulated dual specificity cytosolic kinase
[Lycopersicon esculentum] gi|14484938|gb|AAK62821;
similar to serine/threonine protein kinase
gi|1066501|gb|AAA81538
Length = 450
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +2
Query: 32 LLIPAKCLYHEYSSTSLLTMPHWEKLLLS*EVTSLPRRVKTS 157
+ +P C+ + + T P EKLLL TS+P RV S
Sbjct: 8 ICLPISCINNTNQKKTTTTNPPKEKLLLLSRQTSVPSRVYMS 49
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,298,374
Number of Sequences: 28952
Number of extensions: 431519
Number of successful extensions: 1125
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1032
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1095
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1989897600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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