Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0153.Seq
(690 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 184 4e-47
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 184 5e-47
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 184 5e-47
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 182 2e-46
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 182 2e-46
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 182 2e-46
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 182 2e-46
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 182 3e-46
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 182 3e-46
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 163 1e-40
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 156 1e-38
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 155 2e-38
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 109 2e-24
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 95 3e-20
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 82 3e-16
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 68 5e-12
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 63 2e-10
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 56 2e-08
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 49 3e-06
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.10
At1g02890.1 68414.m00256 AAA-type ATPase family protein contains... 30 1.3
At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein c... 30 1.7
At4g27850.1 68417.m03999 proline-rich family protein contains pr... 29 2.2
At3g28790.1 68416.m03593 expressed protein 29 2.2
At3g19430.1 68416.m02464 late embryogenesis abundant protein-rel... 29 2.2
At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical t... 29 2.2
At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical t... 29 2.2
At1g51090.1 68414.m05744 heavy-metal-associated domain-containin... 29 2.2
At1g19950.1 68414.m02500 abscisic acid-responsive HVA22 family p... 29 2.2
At4g31670.1 68417.m04497 ubiquitin carboxyl-terminal hydrolase f... 29 2.9
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 29 3.8
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 29 3.8
At5g18270.2 68418.m02148 no apical meristem (NAM) family protein... 29 3.8
At5g18270.1 68418.m02147 no apical meristem (NAM) family protein... 29 3.8
At2g22470.1 68415.m02664 arabinogalactan-protein (AGP2) identica... 29 3.8
At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identica... 29 3.8
At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identica... 29 3.8
At1g16690.2 68414.m01999 transcription factor-related similar to... 29 3.8
At1g16690.1 68414.m01998 transcription factor-related similar to... 29 3.8
At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit (... 28 5.1
At1g62440.1 68414.m07044 leucine-rich repeat family protein / ex... 28 5.1
At1g02405.1 68414.m00187 proline-rich family protein contains pr... 28 5.1
At4g36650.1 68417.m05201 transcription factor IIB (TFIIB) family... 28 6.7
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 8.9
At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid t... 27 8.9
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 184 bits (449), Expect = 4e-47
Identities = 84/85 (98%), Positives = 85/85 (100%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 434
SKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 62 SKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 121
Query: 435 TQIMFETFNTPAMYVAIQAVLSLYA 509
TQIMFETFNTPAMYVAIQAVLSLYA
Sbjct: 122 TQIMFETFNTPAMYVAIQAVLSLYA 146
Score = 120 bits (288), Expect = 1e-27
Identities = 57/60 (95%), Positives = 58/60 (96%)
Frame = +2
Query: 509 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDDLMKILTERGYLFTTTA 688
SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGY FTT+A
Sbjct: 147 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTSA 206
Score = 109 bits (262), Expect = 2e-24
Identities = 49/59 (83%), Positives = 54/59 (91%)
Frame = +1
Query: 85 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQAK 261
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQ+K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 184 bits (448), Expect = 5e-47
Identities = 84/85 (98%), Positives = 84/85 (98%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 434
SKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 62 SKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 121
Query: 435 TQIMFETFNTPAMYVAIQAVLSLYA 509
TQIMFETFNTPAMYVAIQAVLSLYA
Sbjct: 122 TQIMFETFNTPAMYVAIQAVLSLYA 146
Score = 122 bits (294), Expect = 2e-28
Identities = 58/60 (96%), Positives = 58/60 (96%)
Frame = +2
Query: 509 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDDLMKILTERGYLFTTTA 688
SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGY FTTTA
Sbjct: 147 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYSFTTTA 206
Score = 109 bits (262), Expect = 2e-24
Identities = 49/59 (83%), Positives = 54/59 (91%)
Frame = +1
Query: 85 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQAK 261
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQ+K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 184 bits (448), Expect = 5e-47
Identities = 84/85 (98%), Positives = 84/85 (98%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 434
SKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 62 SKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 121
Query: 435 TQIMFETFNTPAMYVAIQAVLSLYA 509
TQIMFETFNTPAMYVAIQAVLSLYA
Sbjct: 122 TQIMFETFNTPAMYVAIQAVLSLYA 146
Score = 122 bits (294), Expect = 2e-28
Identities = 58/60 (96%), Positives = 58/60 (96%)
Frame = +2
Query: 509 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDDLMKILTERGYLFTTTA 688
SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGY FTTTA
Sbjct: 147 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYSFTTTA 206
Score = 109 bits (262), Expect = 2e-24
Identities = 49/59 (83%), Positives = 54/59 (91%)
Frame = +1
Query: 85 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQAK 261
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQ+K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 182 bits (444), Expect = 2e-46
Identities = 83/85 (97%), Positives = 84/85 (98%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 434
SKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 62 SKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 121
Query: 435 TQIMFETFNTPAMYVAIQAVLSLYA 509
TQIMFETFN PAMYVAIQAVLSLYA
Sbjct: 122 TQIMFETFNVPAMYVAIQAVLSLYA 146
Score = 124 bits (299), Expect = 6e-29
Identities = 58/60 (96%), Positives = 59/60 (98%)
Frame = +2
Query: 509 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDDLMKILTERGYLFTTTA 688
SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGY+FTTTA
Sbjct: 147 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTERGYMFTTTA 206
Score = 109 bits (262), Expect = 2e-24
Identities = 49/59 (83%), Positives = 54/59 (91%)
Frame = +1
Query: 85 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQAK 261
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQ+K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 182 bits (443), Expect = 2e-46
Identities = 81/85 (95%), Positives = 85/85 (100%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 434
SKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKM
Sbjct: 62 SKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKM 121
Query: 435 TQIMFETFNTPAMYVAIQAVLSLYA 509
TQIMFETFN+PAMYVAIQAVLSLYA
Sbjct: 122 TQIMFETFNSPAMYVAIQAVLSLYA 146
Score = 120 bits (289), Expect = 9e-28
Identities = 56/60 (93%), Positives = 59/60 (98%)
Frame = +2
Query: 509 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDDLMKILTERGYLFTTTA 688
SGRTTGIVLDSGDGVSHTVPIYEG++LPHAILRLDLAGRDLTD LMKILTERGY+FTTTA
Sbjct: 147 SGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYMFTTTA 206
Score = 105 bits (251), Expect = 4e-23
Identities = 45/59 (76%), Positives = 53/59 (89%)
Frame = +1
Query: 85 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQAK 261
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQ+K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 182 bits (443), Expect = 2e-46
Identities = 81/85 (95%), Positives = 85/85 (100%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 434
SKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKM
Sbjct: 62 SKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKM 121
Query: 435 TQIMFETFNTPAMYVAIQAVLSLYA 509
TQIMFETFN+PAMYVAIQAVLSLYA
Sbjct: 122 TQIMFETFNSPAMYVAIQAVLSLYA 146
Score = 120 bits (289), Expect = 9e-28
Identities = 56/60 (93%), Positives = 59/60 (98%)
Frame = +2
Query: 509 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDDLMKILTERGYLFTTTA 688
SGRTTGIVLDSGDGVSHTVPIYEG++LPHAILRLDLAGRDLTD LMKILTERGY+FTTTA
Sbjct: 147 SGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYMFTTTA 206
Score = 105 bits (251), Expect = 4e-23
Identities = 45/59 (76%), Positives = 53/59 (89%)
Frame = +1
Query: 85 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQAK 261
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQ+K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 182 bits (443), Expect = 2e-46
Identities = 81/85 (95%), Positives = 85/85 (100%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 434
SKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKM
Sbjct: 62 SKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKM 121
Query: 435 TQIMFETFNTPAMYVAIQAVLSLYA 509
TQIMFETFN+PAMYVAIQAVLSLYA
Sbjct: 122 TQIMFETFNSPAMYVAIQAVLSLYA 146
Score = 120 bits (289), Expect = 9e-28
Identities = 56/60 (93%), Positives = 59/60 (98%)
Frame = +2
Query: 509 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDDLMKILTERGYLFTTTA 688
SGRTTGIVLDSGDGVSHTVPIYEG++LPHAILRLDLAGRDLTD LMKILTERGY+FTTTA
Sbjct: 147 SGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYMFTTTA 206
Score = 105 bits (251), Expect = 4e-23
Identities = 45/59 (76%), Positives = 53/59 (89%)
Frame = +1
Query: 85 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQAK 261
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQ+K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 182 bits (442), Expect = 3e-46
Identities = 82/85 (96%), Positives = 83/85 (97%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 434
SKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKM
Sbjct: 62 SKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKM 121
Query: 435 TQIMFETFNTPAMYVAIQAVLSLYA 509
TQIMFETFN PAMYVAIQAVLSLYA
Sbjct: 122 TQIMFETFNAPAMYVAIQAVLSLYA 146
Score = 122 bits (293), Expect = 3e-28
Identities = 58/60 (96%), Positives = 58/60 (96%)
Frame = +2
Query: 509 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDDLMKILTERGYLFTTTA 688
SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGY FTTTA
Sbjct: 147 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTA 206
Score = 109 bits (262), Expect = 2e-24
Identities = 49/59 (83%), Positives = 54/59 (91%)
Frame = +1
Query: 85 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQAK 261
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQ+K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 182 bits (442), Expect = 3e-46
Identities = 82/85 (96%), Positives = 83/85 (97%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 434
SKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKM
Sbjct: 62 SKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKM 121
Query: 435 TQIMFETFNTPAMYVAIQAVLSLYA 509
TQIMFETFN PAMYVAIQAVLSLYA
Sbjct: 122 TQIMFETFNAPAMYVAIQAVLSLYA 146
Score = 122 bits (293), Expect = 3e-28
Identities = 58/60 (96%), Positives = 58/60 (96%)
Frame = +2
Query: 509 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDDLMKILTERGYLFTTTA 688
SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGY FTTTA
Sbjct: 147 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTA 206
Score = 109 bits (262), Expect = 2e-24
Identities = 49/59 (83%), Positives = 54/59 (91%)
Frame = +1
Query: 85 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQAK 261
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQ+K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 163 bits (395), Expect = 1e-40
Identities = 69/85 (81%), Positives = 80/85 (94%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 434
++RGIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPLNPK NREKM
Sbjct: 63 ARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNREKM 122
Query: 435 TQIMFETFNTPAMYVAIQAVLSLYA 509
TQIMFE+F P+MY+ IQAVLSLY+
Sbjct: 123 TQIMFESFAFPSMYIGIQAVLSLYS 147
Score = 111 bits (268), Expect = 3e-25
Identities = 52/60 (86%), Positives = 56/60 (93%)
Frame = +2
Query: 509 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDDLMKILTERGYLFTTTA 688
SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT+ L KI+ ERGY +TT+A
Sbjct: 148 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTEYLTKIMMERGYTYTTSA 207
Score = 103 bits (248), Expect = 8e-23
Identities = 45/59 (76%), Positives = 54/59 (91%)
Frame = +1
Query: 85 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQAK 261
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VGDEAQA+
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQAR 64
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 156 bits (378), Expect = 1e-38
Identities = 67/85 (78%), Positives = 79/85 (92%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 434
++ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPVLLTEAPLNPKA+REKM
Sbjct: 17 ARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPLNPKADREKM 76
Query: 435 TQIMFETFNTPAMYVAIQAVLSLYA 509
TQIMFETF P+MY+ +QA LSL+A
Sbjct: 77 TQIMFETFAVPSMYIGMQAALSLHA 101
Score = 93.9 bits (223), Expect = 9e-20
Identities = 45/54 (83%), Positives = 48/54 (88%)
Frame = +2
Query: 509 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDDLMKILTERGY 670
SGRTTG VLDSGDGVS+ VPIYEG ALPHAILRLDLAGR LT+ LMKI+ ERGY
Sbjct: 102 SGRTTGTVLDSGDGVSYIVPIYEGSALPHAILRLDLAGRHLTNYLMKIMMERGY 155
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = +1
Query: 208 MVGMGQKDSYVGDEAQAK 261
MVGM + D +VGD+A+A+
Sbjct: 1 MVGMNENDLFVGDDAEAR 18
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 155 bits (377), Expect = 2e-38
Identities = 73/102 (71%), Positives = 83/102 (81%)
Frame = +3
Query: 204 RDGRYGTEGLLCRR*GTSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 383
RDG E + G + R ILTLK P+EHGIV NWDDMEKIWH+TFYNELRV PEEHP
Sbjct: 35 RDGLNPNESYVGEE-GHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHP 93
Query: 384 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 509
VLLTEAP NPKANREKMTQIMFE+F+ PAMYV++Q+VL LY+
Sbjct: 94 VLLTEAPYNPKANREKMTQIMFESFDVPAMYVSMQSVLYLYS 135
Score = 103 bits (248), Expect = 8e-23
Identities = 46/60 (76%), Positives = 54/60 (90%)
Frame = +2
Query: 509 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDDLMKILTERGYLFTTTA 688
SGRTTG+VLD G+ VSHTVP+YEGYALPH ILRLDL GRDLTD L++I+TERGY +TT+A
Sbjct: 136 SGRTTGVVLDLGERVSHTVPVYEGYALPHGILRLDLGGRDLTDYLIEIMTERGYTYTTSA 195
Score = 60.9 bits (141), Expect = 8e-10
Identities = 28/53 (52%), Positives = 36/53 (67%)
Frame = +1
Query: 100 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQA 258
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVG+E A
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHA 51
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 109 bits (261), Expect = 2e-24
Identities = 44/80 (55%), Positives = 59/80 (73%)
Frame = +3
Query: 270 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 449
L + YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ PLNP NREKM + MF
Sbjct: 66 LDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREKMIETMF 125
Query: 450 ETFNTPAMYVAIQAVLSLYA 509
E +N +++ IQAVL+LYA
Sbjct: 126 EKYNFAGVFIQIQAVLTLYA 145
Score = 70.1 bits (164), Expect = 1e-12
Identities = 29/59 (49%), Positives = 42/59 (71%)
Frame = +2
Query: 512 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDDLMKILTERGYLFTTTA 688
G TG+V+DSGDGV+H VP+ +GY+ PH R+++AGR +T L+ +L+ RGY TA
Sbjct: 147 GLLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITAYLVDLLSRRGYAMNKTA 205
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/51 (45%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Frame = +1
Query: 100 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGD 246
+V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VG+
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGE 57
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 95.5 bits (227), Expect = 3e-20
Identities = 41/78 (52%), Positives = 54/78 (69%)
Frame = +3
Query: 276 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 455
L YPIEHG V +WD ME+ W +N LR PE+H LLTE+PL P +RE +I+FET
Sbjct: 86 LHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTPPESREYTGEILFET 145
Query: 456 FNTPAMYVAIQAVLSLYA 509
FN P +Y+A+ +VL+L A
Sbjct: 146 FNVPGLYIAVNSVLALAA 163
Score = 53.2 bits (122), Expect = 2e-07
Identities = 21/49 (42%), Positives = 34/49 (69%)
Frame = +2
Query: 521 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDDLMKILTERG 667
TG+V+D GDG +H VP+ EGY + I + +AG+D+T + +++ ERG
Sbjct: 173 TGVVVDVGDGATHVVPVAEGYVIGSCIKSIPIAGKDVTLFIQQLMRERG 221
Score = 35.9 bits (79), Expect = 0.025
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +1
Query: 97 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 183
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 82.2 bits (194), Expect = 3e-16
Identities = 35/84 (41%), Positives = 55/84 (65%)
Frame = +3
Query: 258 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 437
+R + + PI+ GIV++WD ++ IW H F + L + P EHP+LL E PLN + REK
Sbjct: 85 RRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLNTQQQREKAA 144
Query: 438 QIMFETFNTPAMYVAIQAVLSLYA 509
++MFE + PA+++A VL+ +A
Sbjct: 145 ELMFEKYKVPALFMAKNPVLTSFA 168
Score = 56.8 bits (131), Expect = 1e-08
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +1
Query: 85 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 186
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/53 (39%), Positives = 32/53 (60%)
Frame = +2
Query: 509 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDDLMKILTERG 667
+GR T +V+D G G + P+++GY L A++ L G LTD L+K L +G
Sbjct: 169 TGRATSLVVDCGGGSTTISPVHDGYVLQKAVVSSPLGGEFLTDCLLKSLESKG 221
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 68.1 bits (159), Expect = 5e-12
Identities = 34/76 (44%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Frame = +3
Query: 285 PIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFN 461
PIE G++ +WD ME + + Y L E +L T+ PKA RE++ Q+MFETFN
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116
Query: 462 TPAMYVAIQAVLSLYA 509
Y + QAVLSLYA
Sbjct: 117 VSGFYASEQAVLSLYA 132
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 97 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGR 189
ALVVD GS KAG A D +P + PS + R
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR 34
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 62.9 bits (146), Expect = 2e-10
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = +3
Query: 258 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 431
+R + + P + GIVT+WD ++ +W H F N L + P EHP+LL E PLN + REK
Sbjct: 79 RRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLAEPPLNSQQQREK 136
Score = 57.2 bits (132), Expect = 1e-08
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = +1
Query: 85 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 186
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 56.4 bits (130), Expect = 2e-08
Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Frame = +3
Query: 276 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 455
++ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFED 120
Query: 456 FNTPAMYVA-IQAVLSLY 506
F ++Y+A Q+++ LY
Sbjct: 121 FGFSSLYIAHPQSLVHLY 138
Score = 45.2 bits (102), Expect = 4e-05
Identities = 23/74 (31%), Positives = 38/74 (51%)
Frame = +2
Query: 443 HVRNIQHARHVRRHPSRALAVRSGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 622
H +++ H R P L S +V+D G +H VP+ + L HAI R+DL G
Sbjct: 130 HPQSLVHLYEASRQPDSIL---SKTQCSLVVDCGFSFTHAVPVLHNFTLNHAIKRIDLGG 186
Query: 623 RDLTDDLMKILTER 664
+ T+ L ++++ R
Sbjct: 187 KAFTNYLKELVSYR 200
Score = 32.7 bits (71), Expect = 0.24
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +1
Query: 100 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 192
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 48.8 bits (111), Expect = 3e-06
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +3
Query: 285 PIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 461
P + +V ++ ME I + F + +HP+L+TE NP +R KM +++FET+
Sbjct: 85 PFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFETYG 144
Query: 462 TPAMYVAIQAVLS 500
PA+ + A S
Sbjct: 145 VPAVAFGVDAAFS 157
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/49 (42%), Positives = 31/49 (63%)
Frame = +1
Query: 100 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD 246
+V+DNG+ + G+AG+ PR VF +IV RPRH+ G+ + VGD
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGD 66
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +2
Query: 524 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDDLMKILT 658
GIVL G +H++P +G + R ++ G +TD L ++L+
Sbjct: 171 GIVLCPGFTTTHSIPFVDGEPIYKGSSRTNIGGYHVTDYLKQLLS 215
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.9 bits (74), Expect = 0.10
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = -2
Query: 221 PIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 84
P P I P RGL +G T+ +SSPA+P + +P +ST + TS+
Sbjct: 290 PTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At1g02890.1 68414.m00256 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family; similar to
mitochondrial sorting protein 1 (MSP1) (TAT-binding
homolog 4) (Swiss-Prot:P28737) [Saccharomyces
cerevisiae]
Length = 1252
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +1
Query: 496 SRCTLRSYHRYRAGLRRRCL-PHRAHLRRIRTPPRHPASG 612
S T +SY ++AG R R L P + L +R PPR PA+G
Sbjct: 594 STATSKSY-TFKAGDRVRFLGPSTSSLASLRAPPRGPATG 632
>At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein
contains Pfam PF01422: NF-X1 type zinc finger; similar
to transcriptional repressor NF-X1 (SP:Q12986) [Homo
sapiens]; similar to EST gb|T21002
Length = 1188
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = +3
Query: 513 VVPPVSCWTPATVSPTPCPSTKDT-HSPTPSC 605
+ PP+SC TP PCP + HS T C
Sbjct: 645 IPPPLSCGTPVPSCQLPCPIPQPCGHSDTHGC 676
>At4g27850.1 68417.m03999 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 577
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = +3
Query: 510 PVVPPVSCWTPATVSPTPCPSTKDTHSPTP 599
P PP S TP SP P P + SPTP
Sbjct: 230 PGPPPSSSPTPGPDSPLPSPGPPPSPSPTP 259
>At3g28790.1 68416.m03593 expressed protein
Length = 608
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/29 (51%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +3
Query: 519 PPVSCWTPATVSP-TPCPSTKDTHSPTPS 602
P S TP+T +P TP PST +PTPS
Sbjct: 281 PTPSTPTPSTPTPSTPTPSTPTPSTPTPS 309
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +3
Query: 552 SPTPCPSTKDTHSPTPS 602
SPTP PST +PTPS
Sbjct: 278 SPTPTPSTPTPSTPTPS 294
>At3g19430.1 68416.m02464 late embryogenesis abundant
protein-related / LEA protein-related similar to late
embryogenesis abundant protein [Picea glauca] GI:1350543
Length = 559
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +3
Query: 510 PVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 602
PV PP TP+ SPTP P + +PTPS
Sbjct: 96 PVSPPPPTPTPSVPSPTP-PVSPPPPTPTPS 125
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +3
Query: 510 PVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 602
PV PP TP+ SPTP P + +PTPS
Sbjct: 114 PVSPPPPTPTPSVPSPTP-PVSPPPPTPTPS 143
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +3
Query: 510 PVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 602
PV PP TP+ SPTP P + +PTPS
Sbjct: 132 PVSPPPPTPTPSVPSPTP-PVSPPPPTPTPS 161
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = +3
Query: 510 PVVPPVSCWTPATVSPTPCPSTKDTHSPTP 599
PV PP TP+ SPTP T SP P
Sbjct: 150 PVSPPPPTPTPSVPSPTPPVPTDPMPSPPP 179
>At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +3
Query: 519 PPVSCWTPATVSPTPCPSTKDTHSPTP 599
PP TP+T S TP P T +H+PTP
Sbjct: 75 PPSHTPTPSTPSHTPTPHT-PSHTPTP 100
>At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +3
Query: 519 PPVSCWTPATVSPTPCPSTKDTHSPTP 599
PP TP+T S TP P T +H+PTP
Sbjct: 75 PPSHTPTPSTPSHTPTPHT-PSHTPTP 100
>At1g51090.1 68414.m05744 heavy-metal-associated domain-containing
protein contains Pfam profile PF00403:
Heavy-metal-associated domain
Length = 171
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/35 (34%), Positives = 15/35 (42%)
Frame = +3
Query: 507 APVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVW 611
AP P PA V P P P + +P P +W
Sbjct: 93 APAPAPAQAQAPALVRPAPVPVLVSSSAPQPMPMW 127
>At1g19950.1 68414.m02500 abscisic acid-responsive HVA22 family
protein weak similarity to SP|Q00765 Polyposis locus
protein 1 (TB2 protein) {Homo sapiens}; contains Pfam
profile PF03134: TB2/DP1, HVA22 family
Length = 315
Score = 29.5 bits (63), Expect = 2.2
Identities = 20/74 (27%), Positives = 29/74 (39%)
Frame = +3
Query: 381 PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAPVVPPVSCWTPATVSPT 560
P L+T+ P++PK Q +T A Q L+ P PP P P
Sbjct: 191 PQLVTKEPISPKPLSSPRKQQQLQTETKEAKASVSQTKLTTLTPPGPP-----PPPPPPP 245
Query: 561 PCPSTKDTHSPTPS 602
P P+T + P+
Sbjct: 246 PSPTTAAKRNADPA 259
>At4g31670.1 68417.m04497 ubiquitin carboxyl-terminal hydrolase
family protein / zinc finger (MYND type) family protein
similar to ubiquitin-specific protease 15 (UBP15)
[Arabidopsis thaliana] GI:11993475; contains Pfam
profiles PF00443: Ubiquitin carboxyl-terminal hydrolase,
PF01753: MYND finger
Length = 631
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +3
Query: 468 AMYVAIQAVLSLYAPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 602
+M AI++ S +A + PV +P SP+P PS + SP+PS
Sbjct: 509 SMVGAIESRSSTHATIEDPVCEQSP---SPSPSPSPSPSPSPSPS 550
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 28.7 bits (61), Expect = 3.8
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 10/66 (15%)
Frame = +3
Query: 342 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NTPAMYVAIQA 491
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 492 VLSLYA 509
VL+LYA
Sbjct: 241 VLALYA 246
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 28.7 bits (61), Expect = 3.8
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 10/66 (15%)
Frame = +3
Query: 342 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NTPAMYVAIQA 491
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 492 VLSLYA 509
VL+LYA
Sbjct: 241 VLALYA 246
>At5g18270.2 68418.m02148 no apical meristem (NAM) family protein
contains Pfam PF02365 : No apical meristem (NAM)
protein; similar to cup-shaped cotyledon CUC2
(GI:1944132) [Arabidopsis thaliana]
Length = 335
Score = 28.7 bits (61), Expect = 3.8
Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 2/102 (1%)
Frame = +3
Query: 297 GIVTNW--DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPA 470
G TNW + +++YN + A +E V NP + MT+I E F
Sbjct: 135 GEKTNWVMHEYRLEGKYSYYNLPKSARDEWVVCRVFHKNNPSTTTQPMTRIPVEDFTRMD 194
Query: 471 MYVAIQAVLSLYAPVVPPVSCWTPATVSPTPCPSTKDTHSPT 596
I +L + +PP+ P+ +S T P+ K + PT
Sbjct: 195 SLENIDHLLDFSS--LPPLI--DPSFMSQTEQPNFKPINPPT 232
>At5g18270.1 68418.m02147 no apical meristem (NAM) family protein
contains Pfam PF02365 : No apical meristem (NAM)
protein; similar to cup-shaped cotyledon CUC2
(GI:1944132) [Arabidopsis thaliana]
Length = 335
Score = 28.7 bits (61), Expect = 3.8
Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 2/102 (1%)
Frame = +3
Query: 297 GIVTNW--DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPA 470
G TNW + +++YN + A +E V NP + MT+I E F
Sbjct: 135 GEKTNWVMHEYRLEGKYSYYNLPKSARDEWVVCRVFHKNNPSTTTQPMTRIPVEDFTRMD 194
Query: 471 MYVAIQAVLSLYAPVVPPVSCWTPATVSPTPCPSTKDTHSPT 596
I +L + +PP+ P+ +S T P+ K + PT
Sbjct: 195 SLENIDHLLDFSS--LPPLI--DPSFMSQTEQPNFKPINPPT 232
>At2g22470.1 68415.m02664 arabinogalactan-protein (AGP2) identical
to gi|3883122|gb|AAC77824; supported by cDNA
gi|3883121|gb|AF082299
Length = 131
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +3
Query: 516 VPPVSCWTPATVSPTPCPSTKDTHSPTPS 602
+PPV+ TP+ ++ P P + T +PT S
Sbjct: 38 LPPVTAETPSPIASPPVPVNEPTPAPTTS 66
>At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 176
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +3
Query: 519 PPVSCWTPATVSPTPCPSTK-DTHSPTPS 602
PP +P P P P+TK D+ SP+PS
Sbjct: 112 PPAPLASPPAQVPAPAPTTKPDSPSPSPS 140
>At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 191
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +3
Query: 519 PPVSCWTPATVSPTPCPSTK-DTHSPTPS 602
PP +P P P P+TK D+ SP+PS
Sbjct: 112 PPAPLASPPAQVPAPAPTTKPDSPSPSPS 140
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +3
Query: 270 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 431
L++KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +3
Query: 270 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 431
L++KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit
(IRX3) identical to gi:5230423
Length = 1026
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Frame = +2
Query: 398 GSPQPQGQQREDDPDHVR---NIQHARHVRRHPSRAL 499
GSP+ +G + E+D D + NI+H + +H + A+
Sbjct: 91 GSPRVEGDEDEEDIDDIEYEFNIEHEQDKHKHSAEAM 127
>At1g62440.1 68414.m07044 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 826
Score = 28.3 bits (60), Expect = 5.1
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 7/47 (14%)
Frame = +3
Query: 504 YAPVV----PPVSCWTPATVSPTPCPST---KDTHSPTPSCVWT*PV 623
Y PV+ PP ++P T SP P P T SP PS V+ PV
Sbjct: 654 YTPVIQSPPPPPVYYSPVTQSPPPPPPVYYPPVTQSPPPSPVYYPPV 700
>At1g02405.1 68414.m00187 proline-rich family protein contains
proline-rich region, INTERPRO:IPR000694
Length = 134
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 510 PVVPPVSCWTPATVSPTPCPSTKDTHSPTP 599
P PP SC TP+ P+P P K + P+P
Sbjct: 53 PSPPPPSC-TPSPPPPSPPPPKKSSCPPSP 81
>At4g36650.1 68417.m05201 transcription factor IIB (TFIIB) family
protein contains Pfam domain, PF00382: Transcription
factor TFIIB repeat
Length = 503
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +3
Query: 498 SLYAPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCV 608
S Y P VPP + T+S T + + P PS V
Sbjct: 320 SNYTPAVPPEKAFPTTTISTTRSTTPRAVDPPEPSFV 356
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -2
Query: 197 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 75
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 334
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +3
Query: 510 PVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCV 608
PVV P + P PTP P +PTP +
Sbjct: 173 PVVTPPTPTPPVITPPTPTPPVVTPPTPTPPVI 205
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +3
Query: 510 PVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCV 608
PVV P + P PTP P +PTP V
Sbjct: 193 PVVTPPTPTPPVITPPTPTPPVITPPTPTPPVV 225
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +3
Query: 510 PVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCV 608
PV+ P + P PTP P +PTP V
Sbjct: 203 PVITPPTPTPPVITPPTPTPPVVTPPTPTPPVV 235
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,597,609
Number of Sequences: 28952
Number of extensions: 406371
Number of successful extensions: 1535
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 1270
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1511
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1467502800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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