Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0120X.Seq
(346 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g02490.1 68418.m00182 heat shock cognate 70 kDa protein 2 (HS... 75 1e-14
At5g02500.1 68418.m00183 heat shock cognate 70 kDa protein 1 (HS... 73 4e-14
At3g09440.1 68416.m01121 heat shock cognate 70 kDa protein 3 (HS... 72 9e-14
At3g12580.1 68416.m01567 heat shock protein 70, putative / HSP70... 71 2e-13
At1g16030.1 68414.m01924 heat shock protein 70, putative / HSP70... 70 5e-13
At1g56410.1 68414.m06487 heat shock cognate 70 kDa protein, puta... 62 1e-10
At5g09590.1 68418.m01110 heat shock protein 70 / HSP70 (HSC70-5)... 60 5e-10
At4g37910.1 68417.m05361 heat shock protein 70, mitochondrial, p... 58 1e-09
At5g42020.1 68418.m05115 luminal binding protein 2 (BiP-2) (BP2)... 57 3e-09
At1g09080.1 68414.m01013 luminal binding protein 3 (BiP-3) (BP3)... 56 6e-09
At5g28540.1 68418.m03480 luminal binding protein 1 (BiP-1) (BP1)... 56 8e-09
At5g42020.2 68418.m05116 luminal binding protein 2 (BiP-2) (BP2)... 55 1e-08
At4g24280.1 68417.m03486 heat shock protein 70, putative / HSP70... 55 1e-08
At5g49910.1 68418.m06180 heat shock protein 70 / HSP70 (HSC70-7)... 54 3e-08
At2g32120.2 68415.m03926 heat shock protein 70 family protein / ... 50 5e-07
At2g32120.1 68415.m03925 heat shock protein 70 family protein / ... 50 5e-07
At2g40925.1 68415.m05051 F-box family protein contains F-box dom... 29 0.83
At2g01730.1 68415.m00101 metallo-beta-lactamase family protein s... 29 0.83
At1g03080.1 68414.m00282 kinase interacting family protein simil... 29 1.1
At4g16860.1 68417.m02547 disease resistance protein (TIR-NBS-LRR... 26 7.7
At3g53030.1 68416.m05845 protein kinase family protein contains ... 26 7.7
At2g04240.2 68415.m00413 zinc finger (C3HC4-type RING finger) fa... 26 7.7
At2g04240.1 68415.m00412 zinc finger (C3HC4-type RING finger) fa... 26 7.7
>At5g02490.1 68418.m00182 heat shock cognate 70 kDa protein 2
(HSC70-2) (HSP70-2) identical to SP|P22954 Heat shock
cognate 70 kDa protein 2 (Hsc70.2) {Arabidopsis
thaliana}
Length = 653
Score = 75.4 bits (177), Expect = 1e-14
Identities = 40/73 (54%), Positives = 45/73 (61%)
Frame = +2
Query: 38 ILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSYNQPGV 217
IL G+ +E+VQD G+ETAGGVMTTLI+RN YS NQPGV
Sbjct: 385 ILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTTLIQRNTTIPTKKEQVFSTYSDNQPGV 444
Query: 218 LIQVFEGERAMTK 256
LIQVFEGERA TK
Sbjct: 445 LIQVFEGERARTK 457
Score = 62.1 bits (144), Expect = 1e-10
Identities = 27/31 (87%), Positives = 29/31 (93%)
Frame = +1
Query: 253 QDNNLLGKFELTGIPPAPRGVPQIEVTFDID 345
+DNNLLGKFEL+GIPPAPRGVPQI V FDID
Sbjct: 457 KDNNLLGKFELSGIPPAPRGVPQITVCFDID 487
>At5g02500.1 68418.m00183 heat shock cognate 70 kDa protein 1
(HSC70-1) (HSP70-1) identical to SP|P22953 Heat shock
cognate 70 kDa protein 1 (Hsc70.1) {Arabidopsis
thaliana}
Length = 651
Score = 73.3 bits (172), Expect = 4e-14
Identities = 39/73 (53%), Positives = 44/73 (60%)
Frame = +2
Query: 38 ILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSYNQPGV 217
IL G+ +E+VQD G+ETAGGVMTTLI RN YS NQPGV
Sbjct: 385 ILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTTLIPRNTTIPTKKEQVFSTYSDNQPGV 444
Query: 218 LIQVFEGERAMTK 256
LIQV+EGERA TK
Sbjct: 445 LIQVYEGERARTK 457
Score = 62.1 bits (144), Expect = 1e-10
Identities = 27/31 (87%), Positives = 29/31 (93%)
Frame = +1
Query: 253 QDNNLLGKFELTGIPPAPRGVPQIEVTFDID 345
+DNNLLGKFEL+GIPPAPRGVPQI V FDID
Sbjct: 457 KDNNLLGKFELSGIPPAPRGVPQITVCFDID 487
>At3g09440.1 68416.m01121 heat shock cognate 70 kDa protein 3
(HSC70-3) (HSP70-3) identical to SP|O65719 Heat shock
cognate 70 kDa protein 3 (Hsc70.3) {Arabidopsis
thaliana}
Length = 649
Score = 72.1 bits (169), Expect = 9e-14
Identities = 38/73 (52%), Positives = 44/73 (60%)
Frame = +2
Query: 38 ILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSYNQPGV 217
IL G+ +E+VQD G+ETAGGVMT LI+RN YS NQPGV
Sbjct: 385 ILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIQRNTTIPTKKEQVFSTYSDNQPGV 444
Query: 218 LIQVFEGERAMTK 256
LIQV+EGERA TK
Sbjct: 445 LIQVYEGERARTK 457
Score = 62.1 bits (144), Expect = 1e-10
Identities = 27/31 (87%), Positives = 29/31 (93%)
Frame = +1
Query: 253 QDNNLLGKFELTGIPPAPRGVPQIEVTFDID 345
+DNNLLGKFEL+GIPPAPRGVPQI V FDID
Sbjct: 457 KDNNLLGKFELSGIPPAPRGVPQITVCFDID 487
>At3g12580.1 68416.m01567 heat shock protein 70, putative / HSP70,
putative strong similarity to heat shock protein
GI:425194 [Spinacia oleracea]
Length = 650
Score = 71.3 bits (167), Expect = 2e-13
Identities = 38/73 (52%), Positives = 43/73 (58%)
Frame = +2
Query: 38 ILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSYNQPGV 217
IL G+ +E+VQD G+ETAGGVMT LI RN YS NQPGV
Sbjct: 385 ILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQIFSTYSDNQPGV 444
Query: 218 LIQVFEGERAMTK 256
LIQV+EGERA TK
Sbjct: 445 LIQVYEGERARTK 457
Score = 62.1 bits (144), Expect = 1e-10
Identities = 27/31 (87%), Positives = 29/31 (93%)
Frame = +1
Query: 253 QDNNLLGKFELTGIPPAPRGVPQIEVTFDID 345
+DNNLLGKFEL+GIPPAPRGVPQI V FDID
Sbjct: 457 KDNNLLGKFELSGIPPAPRGVPQITVCFDID 487
>At1g16030.1 68414.m01924 heat shock protein 70, putative / HSP70,
putative similar to heat shock protein hsp70 GI:1771478
from [Pisum sativum]
Length = 646
Score = 69.7 bits (163), Expect = 5e-13
Identities = 37/73 (50%), Positives = 43/73 (58%)
Frame = +2
Query: 38 ILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSYNQPGV 217
IL G+ SE+VQD G+ETAGGVMT LI RN Y+ NQPGV
Sbjct: 384 ILTGEGSEKVQDLLLLDVAPLSLGLETAGGVMTVLIPRNTTVPCKKEQVFSTYADNQPGV 443
Query: 218 LIQVFEGERAMTK 256
LIQV+EGERA T+
Sbjct: 444 LIQVYEGERARTR 456
Score = 59.3 bits (137), Expect = 7e-10
Identities = 26/31 (83%), Positives = 27/31 (87%)
Frame = +1
Query: 253 QDNNLLGKFELTGIPPAPRGVPQIEVTFDID 345
+DNNLLG FEL GIPPAPRGVPQI V FDID
Sbjct: 456 RDNNLLGTFELKGIPPAPRGVPQINVCFDID 486
>At1g56410.1 68414.m06487 heat shock cognate 70 kDa protein,
putative / HSC70, putative / HSP70, putative strong
similarity to heat shock cognate 70 kd protein 1
SP:P22953 [Arabidopsis thaliana (Mouse-ear cress)]
Length = 617
Score = 62.1 bits (144), Expect = 1e-10
Identities = 35/72 (48%), Positives = 40/72 (55%)
Frame = +2
Query: 38 ILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSYNQPGV 217
IL G+ +E+VQD GIET GGVMTTLI+RN NQP V
Sbjct: 385 ILSGEGNEKVQDLLLLDVTPLSLGIETIGGVMTTLIQRNTTIPAKKEQEFTTTVDNQPDV 444
Query: 218 LIQVFEGERAMT 253
LIQV+EGERA T
Sbjct: 445 LIQVYEGERART 456
Score = 54.4 bits (125), Expect = 2e-08
Identities = 22/30 (73%), Positives = 26/30 (86%)
Frame = +1
Query: 256 DNNLLGKFELTGIPPAPRGVPQIEVTFDID 345
DNN+LG+F L+GIPPAPRG+PQ V FDID
Sbjct: 458 DNNILGQFVLSGIPPAPRGIPQFTVCFDID 487
>At5g09590.1 68418.m01110 heat shock protein 70 / HSP70 (HSC70-5)
identical to heat shock protein 70 [Arabidopsis
thaliana] GI:6746590
Length = 682
Score = 59.7 bits (138), Expect = 5e-10
Identities = 25/30 (83%), Positives = 28/30 (93%)
Frame = +1
Query: 256 DNNLLGKFELTGIPPAPRGVPQIEVTFDID 345
DN LLG+F+L GIPP+PRGVPQIEVTFDID
Sbjct: 499 DNKLLGEFDLVGIPPSPRGVPQIEVTFDID 528
Score = 35.9 bits (79), Expect = 0.007
Identities = 21/48 (43%), Positives = 24/48 (50%)
Frame = +2
Query: 107 GIETAGGVMTTLIKRNXXXXXXXXXXXXXYSYNQPGVLIQVFEGERAM 250
GIET GGV T LI RN + NQ V I+V +GER M
Sbjct: 449 GIETLGGVFTRLITRNTTIPTKKSQVFSTAADNQTQVGIRVLQGEREM 496
>At4g37910.1 68417.m05361 heat shock protein 70, mitochondrial,
putative / HSP70, mitochondrial, putative strong
similarity to SP|Q01899 Heat shock 70 kDa protein,
mitochondrial precursor {Phaseolus vulgaris}
Length = 682
Score = 58.4 bits (135), Expect = 1e-09
Identities = 24/30 (80%), Positives = 28/30 (93%)
Frame = +1
Query: 256 DNNLLGKFELTGIPPAPRGVPQIEVTFDID 345
DN +LG+F+L GIPPAPRG+PQIEVTFDID
Sbjct: 494 DNKVLGEFDLVGIPPAPRGMPQIEVTFDID 523
>At5g42020.1 68418.m05115 luminal binding protein 2 (BiP-2) (BP2)
similar to SWISS-PROT: Q39043; GI:1303695; luminal
binding protein (BiP) [Arabidopsis thaliana]
Length = 668
Score = 57.2 bits (132), Expect = 3e-09
Identities = 23/31 (74%), Positives = 28/31 (90%)
Frame = +1
Query: 253 QDNNLLGKFELTGIPPAPRGVPQIEVTFDID 345
+D LLGKF+LTG+PPAPRG PQIEVTF++D
Sbjct: 482 KDCRLLGKFDLTGVPPAPRGTPQIEVTFEVD 512
Score = 55.2 bits (127), Expect = 1e-08
Identities = 31/73 (42%), Positives = 36/73 (49%)
Frame = +2
Query: 38 ILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSYNQPGV 217
IL G+ +E +D GIET GGVMT LI RN Y Q V
Sbjct: 410 ILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTV 469
Query: 218 LIQVFEGERAMTK 256
IQVFEGER++TK
Sbjct: 470 SIQVFEGERSLTK 482
>At1g09080.1 68414.m01013 luminal binding protein 3 (BiP-3) (BP3)
Similar to Arabidopsis luminal binding protein
(gb|D89342); contains Pfam domain PF00012: dnaK protein
Length = 678
Score = 56.0 bits (129), Expect = 6e-09
Identities = 24/31 (77%), Positives = 28/31 (90%)
Frame = +1
Query: 253 QDNNLLGKFELTGIPPAPRGVPQIEVTFDID 345
+DN LGKF+LTGI PAPRGVPQIEVTF++D
Sbjct: 496 KDNRELGKFDLTGILPAPRGVPQIEVTFEVD 526
Score = 53.6 bits (123), Expect = 3e-08
Identities = 29/73 (39%), Positives = 35/73 (47%)
Frame = +2
Query: 38 ILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSYNQPGV 217
+L G+ EE Q+ GIET GGVMT +I RN Y Q V
Sbjct: 424 VLSGEGGEETQNILLLDVAPLSLGIETVGGVMTNIIPRNTVIPTKKSQVFTTYQDQQTTV 483
Query: 218 LIQVFEGERAMTK 256
I V+EGER+MTK
Sbjct: 484 TINVYEGERSMTK 496
>At5g28540.1 68418.m03480 luminal binding protein 1 (BiP-1) (BP1)
SWISS-PROT:Q9LKR3 PMID:8888624
Length = 669
Score = 55.6 bits (128), Expect = 8e-09
Identities = 23/31 (74%), Positives = 27/31 (87%)
Frame = +1
Query: 253 QDNNLLGKFELTGIPPAPRGVPQIEVTFDID 345
+D LLGKF+L GIPPAPRG PQIEVTF++D
Sbjct: 482 KDCRLLGKFDLNGIPPAPRGTPQIEVTFEVD 512
Score = 55.2 bits (127), Expect = 1e-08
Identities = 31/73 (42%), Positives = 36/73 (49%)
Frame = +2
Query: 38 ILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSYNQPGV 217
IL G+ +E +D GIET GGVMT LI RN Y Q V
Sbjct: 410 ILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTV 469
Query: 218 LIQVFEGERAMTK 256
IQVFEGER++TK
Sbjct: 470 SIQVFEGERSLTK 482
>At5g42020.2 68418.m05116 luminal binding protein 2 (BiP-2) (BP2)
similar to SWISS-PROT: Q39043; GI:1303695; luminal
binding protein (BiP) [Arabidopsis thaliana]
Length = 613
Score = 55.2 bits (127), Expect = 1e-08
Identities = 31/73 (42%), Positives = 36/73 (49%)
Frame = +2
Query: 38 ILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSYNQPGV 217
IL G+ +E +D GIET GGVMT LI RN Y Q V
Sbjct: 410 ILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTV 469
Query: 218 LIQVFEGERAMTK 256
IQVFEGER++TK
Sbjct: 470 SIQVFEGERSLTK 482
Score = 53.6 bits (123), Expect = 3e-08
Identities = 22/29 (75%), Positives = 26/29 (89%)
Frame = +1
Query: 253 QDNNLLGKFELTGIPPAPRGVPQIEVTFD 339
+D LLGKF+LTG+PPAPRG PQIEVTF+
Sbjct: 482 KDCRLLGKFDLTGVPPAPRGTPQIEVTFE 510
>At4g24280.1 68417.m03486 heat shock protein 70, putative / HSP70,
putative strong similarity to heat shock protein 70
[Arabidopsis thaliana] GI:6746592; similar to heat shock
70 protein - Spinacia oleracea,PID:g2654208
Length = 718
Score = 54.8 bits (126), Expect = 1e-08
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = +1
Query: 253 QDNNLLGKFELTGIPPAPRGVPQIEVTFDID 345
+DN LG F L GIPPAPRGVPQIEV FDID
Sbjct: 520 RDNKSLGSFRLDGIPPAPRGVPQIEVKFDID 550
Score = 33.9 bits (74), Expect = 0.029
Identities = 20/65 (30%), Positives = 26/65 (40%)
Frame = +2
Query: 62 EVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSYNQPGVLIQVFEGE 241
+V D G+ET GGVMT +I RN + Q V I V +GE
Sbjct: 456 DVSDIVLLDVTPLSIGLETLGGVMTKIIPRNTTLPTSKSEVFSTAADGQTSVEINVLQGE 515
Query: 242 RAMTK 256
R +
Sbjct: 516 REFVR 520
>At5g49910.1 68418.m06180 heat shock protein 70 / HSP70 (HSC70-7)
identical to heat shock protein 70 [Arabidopsis
thaliana] GI:6746592
Length = 718
Score = 54.0 bits (124), Expect = 3e-08
Identities = 23/31 (74%), Positives = 25/31 (80%)
Frame = +1
Query: 253 QDNNLLGKFELTGIPPAPRGVPQIEVTFDID 345
+DN +G F L GIPPAPRGVPQIEV FDID
Sbjct: 520 RDNKSIGSFRLDGIPPAPRGVPQIEVKFDID 550
Score = 35.1 bits (77), Expect = 0.013
Identities = 22/70 (31%), Positives = 28/70 (40%)
Frame = +2
Query: 47 GDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSYNQPGVLIQ 226
G S +V D G+ET GGVMT +I RN + Q V I
Sbjct: 451 GVLSGDVSDIVLLDVTPLSLGLETLGGVMTKIIPRNTTLPTSKSEVFSTAADGQTSVEIN 510
Query: 227 VFEGERAMTK 256
V +GER +
Sbjct: 511 VLQGEREFVR 520
>At2g32120.2 68415.m03926 heat shock protein 70 family protein /
HSP70 family protein similar to SP|P22953 Heat shock
cognate 70 kDa protein 1 (Hsc70.1) {Arabidopsis
thaliana}; contains InterPro accession IPR001023: Heat
shock protein Hsp70
Length = 563
Score = 49.6 bits (113), Expect = 5e-07
Identities = 20/31 (64%), Positives = 26/31 (83%)
Frame = +1
Query: 253 QDNNLLGKFELTGIPPAPRGVPQIEVTFDID 345
++N+LLG F+L GIPPAP+GVP+I V DID
Sbjct: 474 EENHLLGYFKLVGIPPAPKGVPEINVCMDID 504
>At2g32120.1 68415.m03925 heat shock protein 70 family protein /
HSP70 family protein similar to SP|P22953 Heat shock
cognate 70 kDa protein 1 (Hsc70.1) {Arabidopsis
thaliana}; contains InterPro accession IPR001023: Heat
shock protein Hsp70
Length = 563
Score = 49.6 bits (113), Expect = 5e-07
Identities = 20/31 (64%), Positives = 26/31 (83%)
Frame = +1
Query: 253 QDNNLLGKFELTGIPPAPRGVPQIEVTFDID 345
++N+LLG F+L GIPPAP+GVP+I V DID
Sbjct: 474 EENHLLGYFKLVGIPPAPKGVPEINVCMDID 504
>At2g40925.1 68415.m05051 F-box family protein contains F-box domain
Pfam:PF00646
Length = 403
Score = 29.1 bits (62), Expect = 0.83
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1
Query: 244 CYDQDNNLLGKFELTGIP 297
CYD NN L K E+TG+P
Sbjct: 360 CYDVQNNDLRKVEITGVP 377
>At2g01730.1 68415.m00101 metallo-beta-lactamase family protein
simliar to SP|P79101 Cleavage and polyadenylation
specificity factor, 73 kDa subunit (CPSF 73 kDa subunit)
{Bos taurus}; contains Pfam profile PF00753:
Metallo-beta-lactamase superfamily
Length = 613
Score = 29.1 bits (62), Expect = 0.83
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -1
Query: 241 LTLKYLDEYSGLVIXVGGECLSLFSGDGSVTL-DECGHDTSSS 116
L+ K L SG I CL + S GS+ L D+C H +SSS
Sbjct: 541 LSAKILKTVSGAQIHESENCLQVASFKGSLCLKDKCMHRSSSS 583
>At1g03080.1 68414.m00282 kinase interacting family protein similar to
kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 1744
Score = 28.7 bits (61), Expect = 1.1
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = -1
Query: 178 SLFSGDGSVTLDECGHDTSSSLNTEGKGCYIKQQQILHLLRLVTVQDSSL 29
++ GD + TLDE + T S+L E + C K + + LL T+ S+L
Sbjct: 1082 TILQGDNNKTLDEKAYLTKSTLQLEEEKC--KLEDDISLLLSETIYQSNL 1129
>At4g16860.1 68417.m02547 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1147
Score = 25.8 bits (54), Expect = 7.7
Identities = 19/71 (26%), Positives = 32/71 (45%)
Frame = -1
Query: 232 KYLDEYSGLVIXVGGECLSLFSGDGSVTLDECGHDTSSSLNTEGKGCYIKQQQILHLLRL 53
KYL E L + + E L LF + VTL + + +N + + C K + L L
Sbjct: 778 KYLKEIPDLSLAINLERLYLFGCESLVTLPSSIQNATKLINLDMRDCK-KLESFPTDLNL 836
Query: 52 VTVQDSSLDSC 20
+++ +L C
Sbjct: 837 ESLEYLNLTGC 847
>At3g53030.1 68416.m05845 protein kinase family protein contains
eukaryotic protein kinase domain, INTERPRO:IPR000719
Length = 529
Score = 25.8 bits (54), Expect = 7.7
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = -1
Query: 313 RHAAPVGSRSARIYRASCYLGHSTLTLKYLDEYSGLVIXVGGE-CLSLFSG 164
+H+ P G ++ YLG + LTL +Y GL I + E C + G
Sbjct: 112 KHSGPNGQHVCMVFE---YLGDNLLTLIKYSDYRGLPIPMVKEICYHMLVG 159
>At2g04240.2 68415.m00413 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 162
Score = 25.8 bits (54), Expect = 7.7
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -1
Query: 184 CLSLFSGDGSVTLDECGH 131
CLS F GD + +CGH
Sbjct: 106 CLSKFQGDSEINKLKCGH 123
>At2g04240.1 68415.m00412 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 162
Score = 25.8 bits (54), Expect = 7.7
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -1
Query: 184 CLSLFSGDGSVTLDECGH 131
CLS F GD + +CGH
Sbjct: 106 CLSKFQGDSEINKLKCGH 123
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,260,237
Number of Sequences: 28952
Number of extensions: 132617
Number of successful extensions: 376
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 357
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 375
length of database: 12,070,560
effective HSP length: 72
effective length of database: 9,986,016
effective search space used: 419412672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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