Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0082.Seq
(627 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g11520.1 68418.m01344 aspartate aminotransferase, chloroplast... 103 1e-22
At4g31990.2 68417.m04554 aspartate aminotransferase, chloroplast... 79 3e-15
At4g31990.1 68417.m04553 aspartate aminotransferase, chloroplast... 79 3e-15
At5g19550.1 68418.m02328 aspartate aminotransferase, cytoplasmic... 71 6e-13
At1g62800.1 68414.m07089 aspartate aminotransferase, cytoplasmic... 71 8e-13
At1g62800.2 68414.m07090 aspartate aminotransferase, cytoplasmic... 68 6e-12
At2g30970.1 68415.m03777 aspartate aminotransferase, mitochondri... 64 7e-11
At3g28860.1 68416.m03602 multidrug resistance P-glycoprotein, pu... 30 1.1
At3g19680.1 68416.m02493 expressed protein 30 1.4
At3g54000.3 68416.m05969 expressed protein 29 1.9
At3g54000.2 68416.m05968 expressed protein 29 1.9
At3g54000.1 68416.m05970 expressed protein 29 1.9
At1g75030.1 68414.m08715 pathogenesis-related thaumatin family p... 29 2.5
At2g07750.1 68415.m01003 DEAD box RNA helicase, putative similar... 29 3.3
At1g45233.2 68414.m05190 expressed protein Since this genomic se... 28 4.4
At2g40200.1 68415.m04943 basic helix-loop-helix (bHLH) family pr... 28 5.8
At4g08395.1 68417.m01387 hypothetical protein 27 7.7
At1g75050.1 68414.m08717 thaumatin-like protein, putative / path... 27 7.7
>At5g11520.1 68418.m01344 aspartate aminotransferase, chloroplast /
transaminase A (ASP3) (YLS4) identical to SP|P46644
Aspartate aminotransferase, chloroplast precursor (EC
2.6.1.1) (Transaminase A) {Arabidopsis thaliana};
identical to cDNA YLS4 mRNA for aspartate
aminotransferase (ASP3), partial cds GI:13122285
Length = 449
Score = 103 bits (247), Expect = 1e-22
Identities = 70/210 (33%), Positives = 105/210 (50%), Gaps = 2/210 (0%)
Frame = +2
Query: 2 GKPFVLPSVRKAEE-ILHSRGLNHEYAPISGEATYTDAVAKLAFGEDSPVIKNRSNCTVQ 178
GKP VL VRKAE+ +++ R EY PI G + AKL G DSP I+ TV+
Sbjct: 88 GKPLVLNVVRKAEQQLINDRTRIKEYLPIVGLVEFNKLSAKLILGADSPAIRENRITTVE 147
Query: 179 TLSGTGALRLGLEFITKHYAKAKEICSRRLLGETTR-KSATPSTCRTRNTVTSIPRPMVS 355
LSGTG+LR+G EF+ KHY + ++ G + + T +T R + +
Sbjct: 148 CLSGTGSLRVGGEFLAKHYHQKTIYITQPTWGNHPKIFTLAGLTVKTYRYYDPATRGL-N 206
Query: 356 ICREHSRIYQKFPKFHYSVARVRTQPHRC*PQAQRLGTTFQGDQRKEIIPVFDMAYQGFA 535
+ P + P P Q+ + + K ++P FD AYQGFA
Sbjct: 207 FQGLLEDLGAAAPGSIVLLHACAHNPTGVDPTIQQWEQIRKLMRSKGLMPFFDSAYQGFA 266
Query: 536 NGDVDNDAFAVRLFVKEGHQVMLAQNFAKN 625
+G +D DA +R+FV +G + ++AQ++AKN
Sbjct: 267 SGSLDTDAKPIRMFVADGGECLVAQSYAKN 296
Score = 59.3 bits (137), Expect = 2e-09
Identities = 23/37 (62%), Positives = 29/37 (78%)
Frame = +3
Query: 399 SIILLHACAHNPTGVDPKPSDWEQLSKVIKERKLFPF 509
SI+LLHACAHNPTGVDP WEQ+ K+++ + L PF
Sbjct: 221 SIVLLHACAHNPTGVDPTIQQWEQIRKLMRSKGLMPF 257
Score = 55.6 bits (128), Expect = 3e-08
Identities = 22/39 (56%), Positives = 26/39 (66%)
Frame = +1
Query: 265 PTWGNHPQICNTLNLPHKKYRYFDPKTNGFDLQGALEDI 381
PTWGNHP+I L K YRY+DP T G + QG LED+
Sbjct: 176 PTWGNHPKIFTLAGLTVKTYRYYDPATRGLNFQGLLEDL 214
>At4g31990.2 68417.m04554 aspartate aminotransferase, chloroplast /
transaminase A (ASP5) (AAT1) nearly identical to
SP|P46248 Aspartate aminotransferase, chloroplast
precursor (EC 2.6.1.1) (Transaminase A) {Arabidopsis
thaliana}
Length = 453
Score = 78.6 bits (185), Expect = 3e-15
Identities = 39/85 (45%), Positives = 53/85 (62%)
Frame = +2
Query: 5 KPFVLPSVRKAEEILHSRGLNHEYAPISGEATYTDAVAKLAFGEDSPVIKNRSNCTVQTL 184
+P+VL V+KAE ++ RG N EY PI G A + A A+L FG PVIK + T+Q L
Sbjct: 93 QPYVLNVVKKAENLMLERGDNKEYLPIEGLAAFNKATAELLFGAGHPVIKEQRVATIQGL 152
Query: 185 SGTGALRLGLEFITKHYAKAKEICS 259
SGTG+LRL I +++ AK + S
Sbjct: 153 SGTGSLRLAAALIERYFPGAKVVIS 177
Score = 63.3 bits (147), Expect = 1e-10
Identities = 26/68 (38%), Positives = 37/68 (54%)
Frame = +1
Query: 253 LLPTPTWGNHPQICNTLNLPHKKYRYFDPKTNGFDLQGALEDISKIPEVPLFCCTRAHTT 432
++ +PTWGNH I N +P +YRY+DPKT G D +G + DI + PE
Sbjct: 175 VISSPTWGNHKNIFNDAKVPWSEYRYYDPKTIGLDFEGMIADIKEAPEGSFILLHGCAHN 234
Query: 433 PPVLTPSP 456
P + P+P
Sbjct: 235 PTGIDPTP 242
Score = 58.8 bits (136), Expect = 3e-09
Identities = 25/47 (53%), Positives = 35/47 (74%)
Frame = +2
Query: 485 QRKEIIPVFDMAYQGFANGDVDNDAFAVRLFVKEGHQVMLAQNFAKN 625
Q K IP FD+AYQGFA+G +D DA +VRLF + G + +AQ+++KN
Sbjct: 253 QEKNHIPFFDVAYQGFASGSLDEDAASVRLFAERGMEFFVAQSYSKN 299
Score = 56.4 bits (130), Expect = 1e-08
Identities = 23/51 (45%), Positives = 30/51 (58%)
Frame = +3
Query: 357 FAGSTRGYIKNSRSSIILLHACAHNPTGVDPKPSDWEQLSKVIKERKLFPF 509
F G + S ILLH CAHNPTG+DP P W +++ VI+E+ PF
Sbjct: 210 FEGMIADIKEAPEGSFILLHGCAHNPTGIDPTPEQWVKIADVIQEKNHIPF 260
>At4g31990.1 68417.m04553 aspartate aminotransferase, chloroplast /
transaminase A (ASP5) (AAT1) nearly identical to
SP|P46248 Aspartate aminotransferase, chloroplast
precursor (EC 2.6.1.1) (Transaminase A) {Arabidopsis
thaliana}
Length = 453
Score = 78.6 bits (185), Expect = 3e-15
Identities = 39/85 (45%), Positives = 53/85 (62%)
Frame = +2
Query: 5 KPFVLPSVRKAEEILHSRGLNHEYAPISGEATYTDAVAKLAFGEDSPVIKNRSNCTVQTL 184
+P+VL V+KAE ++ RG N EY PI G A + A A+L FG PVIK + T+Q L
Sbjct: 93 QPYVLNVVKKAENLMLERGDNKEYLPIEGLAAFNKATAELLFGAGHPVIKEQRVATIQGL 152
Query: 185 SGTGALRLGLEFITKHYAKAKEICS 259
SGTG+LRL I +++ AK + S
Sbjct: 153 SGTGSLRLAAALIERYFPGAKVVIS 177
Score = 63.3 bits (147), Expect = 1e-10
Identities = 26/68 (38%), Positives = 37/68 (54%)
Frame = +1
Query: 253 LLPTPTWGNHPQICNTLNLPHKKYRYFDPKTNGFDLQGALEDISKIPEVPLFCCTRAHTT 432
++ +PTWGNH I N +P +YRY+DPKT G D +G + DI + PE
Sbjct: 175 VISSPTWGNHKNIFNDAKVPWSEYRYYDPKTIGLDFEGMIADIKEAPEGSFILLHGCAHN 234
Query: 433 PPVLTPSP 456
P + P+P
Sbjct: 235 PTGIDPTP 242
Score = 58.8 bits (136), Expect = 3e-09
Identities = 25/47 (53%), Positives = 35/47 (74%)
Frame = +2
Query: 485 QRKEIIPVFDMAYQGFANGDVDNDAFAVRLFVKEGHQVMLAQNFAKN 625
Q K IP FD+AYQGFA+G +D DA +VRLF + G + +AQ+++KN
Sbjct: 253 QEKNHIPFFDVAYQGFASGSLDEDAASVRLFAERGMEFFVAQSYSKN 299
Score = 56.4 bits (130), Expect = 1e-08
Identities = 23/51 (45%), Positives = 30/51 (58%)
Frame = +3
Query: 357 FAGSTRGYIKNSRSSIILLHACAHNPTGVDPKPSDWEQLSKVIKERKLFPF 509
F G + S ILLH CAHNPTG+DP P W +++ VI+E+ PF
Sbjct: 210 FEGMIADIKEAPEGSFILLHGCAHNPTGIDPTPEQWVKIADVIQEKNHIPF 260
>At5g19550.1 68418.m02328 aspartate aminotransferase, cytoplasmic
isozyme 1 / transaminase A (ASP2) identical to SP|P46645
Aspartate aminotransferase, cytoplasmic isozyme 1 (EC
2.6.1.1) (Transaminase A) {Arabidopsis thaliana}
Length = 405
Score = 70.9 bits (166), Expect = 6e-13
Identities = 38/79 (48%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Frame = +2
Query: 2 GKPFVLPSVRKAEE-ILHSRGLNHEYAPISGEATYTDAVAKLAFGEDSPVIKNRSNCTVQ 178
GKP VL VRKAE+ +++ EY PI G + + AKL G DSP I TVQ
Sbjct: 44 GKPLVLDVVRKAEQQLVNDPSRVKEYIPIVGISDFNKLSAKLILGADSPAITESRVTTVQ 103
Query: 179 TLSGTGALRLGLEFITKHY 235
LSGTG+LR+G EF+ HY
Sbjct: 104 CLSGTGSLRVGAEFLKTHY 122
Score = 59.7 bits (138), Expect = 2e-09
Identities = 22/46 (47%), Positives = 30/46 (65%)
Frame = +1
Query: 256 LPTPTWGNHPQICNTLNLPHKKYRYFDPKTNGFDLQGALEDISKIP 393
+P PTWGNHP++ N L + +RY+DP T G D +G LED+ P
Sbjct: 129 IPKPTWGNHPKVFNLAGLSVEYFRYYDPATRGLDFKGLLEDLGAAP 174
Score = 58.8 bits (136), Expect = 3e-09
Identities = 24/45 (53%), Positives = 35/45 (77%)
Frame = +2
Query: 491 KEIIPVFDMAYQGFANGDVDNDAFAVRLFVKEGHQVMLAQNFAKN 625
K ++P FD AYQGFA+G +D DA +VR FV +G + ++AQ++AKN
Sbjct: 208 KSLLPFFDSAYQGFASGSLDTDAQSVRTFVADGGECLIAQSYAKN 252
Score = 58.4 bits (135), Expect = 4e-09
Identities = 33/87 (37%), Positives = 44/87 (50%), Gaps = 6/87 (6%)
Frame = +3
Query: 267 YLGKPPANLQHPQ---LAAQEIPLLRSQDQWFR---FAGSTRGYIKNSRSSIILLHACAH 428
Y+ KP HP+ LA + R D R F G +I+LLHACAH
Sbjct: 128 YIPKPTWG-NHPKVFNLAGLSVEYFRYYDPATRGLDFKGLLEDLGAAPSGAIVLLHACAH 186
Query: 429 NPTGVDPKPSDWEQLSKVIKERKLFPF 509
NPTGVDP WEQ+ ++++ + L PF
Sbjct: 187 NPTGVDPTSEQWEQIRQLMRSKSLLPF 213
>At1g62800.1 68414.m07089 aspartate aminotransferase, cytoplasmic
isozyme 2 / transaminase A (ASP4) identical to aspartate
aminotransferase, cytoplasmic isozyme 2 SP:P46646
[Arabidopsis thaliana]
Length = 403
Score = 70.5 bits (165), Expect = 8e-13
Identities = 35/77 (45%), Positives = 47/77 (61%)
Frame = +2
Query: 2 GKPFVLPSVRKAEEILHSRGLNHEYAPISGEATYTDAVAKLAFGEDSPVIKNRSNCTVQT 181
GKP VL VR+AE+ L + L+ EY P++G + KL G+DSP +K T Q
Sbjct: 44 GKPLVLDVVRRAEQQL-ANDLDKEYLPLNGLPEFNKLSTKLILGDDSPALKENRVVTTQC 102
Query: 182 LSGTGALRLGLEFITKH 232
LSGTG+LR+G EF+ H
Sbjct: 103 LSGTGSLRVGAEFLATH 119
Score = 60.5 bits (140), Expect = 9e-10
Identities = 25/45 (55%), Positives = 36/45 (80%)
Frame = +2
Query: 491 KEIIPVFDMAYQGFANGDVDNDAFAVRLFVKEGHQVMLAQNFAKN 625
K ++P FD AYQGFA+G +D DA AVR+FV +G + ++AQ++AKN
Sbjct: 206 KSLLPFFDSAYQGFASGSLDADAQAVRMFVADGGECLIAQSYAKN 250
Score = 58.4 bits (135), Expect = 4e-09
Identities = 22/46 (47%), Positives = 30/46 (65%)
Frame = +1
Query: 256 LPTPTWGNHPQICNTLNLPHKKYRYFDPKTNGFDLQGALEDISKIP 393
+P PTWGNHP+I L + +RY+DPK+ G D +G LED+ P
Sbjct: 127 VPNPTWGNHPRIFTLAGLSVQYFRYYDPKSRGLDFKGMLEDLGAAP 172
Score = 52.0 bits (119), Expect = 3e-07
Identities = 18/37 (48%), Positives = 28/37 (75%)
Frame = +3
Query: 399 SIILLHACAHNPTGVDPKPSDWEQLSKVIKERKLFPF 509
+I++L ACAHNPTGVDP WE++ ++++ + L PF
Sbjct: 175 AIVVLQACAHNPTGVDPTFEQWEKIRRLVRSKSLLPF 211
>At1g62800.2 68414.m07090 aspartate aminotransferase, cytoplasmic
isozyme 2 / transaminase A (ASP4) identical to aspartate
aminotransferase, cytoplasmic isozyme 2 SP:P46646
[Arabidopsis thaliana]
Length = 405
Score = 67.7 bits (158), Expect = 6e-12
Identities = 34/78 (43%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Frame = +2
Query: 2 GKPFVLPSVRKAEEIL-HSRGLNHEYAPISGEATYTDAVAKLAFGEDSPVIKNRSNCTVQ 178
GKP VL VR+AE+ L + + EY P++G + KL G+DSP +K T Q
Sbjct: 44 GKPLVLDVVRRAEQQLANDLSRDKEYLPLNGLPEFNKLSTKLILGDDSPALKENRVVTTQ 103
Query: 179 TLSGTGALRLGLEFITKH 232
LSGTG+LR+G EF+ H
Sbjct: 104 CLSGTGSLRVGAEFLATH 121
Score = 60.5 bits (140), Expect = 9e-10
Identities = 25/45 (55%), Positives = 36/45 (80%)
Frame = +2
Query: 491 KEIIPVFDMAYQGFANGDVDNDAFAVRLFVKEGHQVMLAQNFAKN 625
K ++P FD AYQGFA+G +D DA AVR+FV +G + ++AQ++AKN
Sbjct: 208 KSLLPFFDSAYQGFASGSLDADAQAVRMFVADGGECLIAQSYAKN 252
Score = 58.4 bits (135), Expect = 4e-09
Identities = 22/46 (47%), Positives = 30/46 (65%)
Frame = +1
Query: 256 LPTPTWGNHPQICNTLNLPHKKYRYFDPKTNGFDLQGALEDISKIP 393
+P PTWGNHP+I L + +RY+DPK+ G D +G LED+ P
Sbjct: 129 VPNPTWGNHPRIFTLAGLSVQYFRYYDPKSRGLDFKGMLEDLGAAP 174
Score = 52.0 bits (119), Expect = 3e-07
Identities = 18/37 (48%), Positives = 28/37 (75%)
Frame = +3
Query: 399 SIILLHACAHNPTGVDPKPSDWEQLSKVIKERKLFPF 509
+I++L ACAHNPTGVDP WE++ ++++ + L PF
Sbjct: 177 AIVVLQACAHNPTGVDPTFEQWEKIRRLVRSKSLLPF 213
>At2g30970.1 68415.m03777 aspartate aminotransferase, mitochondrial
/ transaminase A (ASP1) identical to SP|P46643 Aspartate
aminotransferase, mitochondrial precursor (EC 2.6.1.1)
(Transaminase A) {Arabidopsis thaliana}
Length = 430
Score = 64.1 bits (149), Expect = 7e-11
Identities = 37/84 (44%), Positives = 49/84 (58%)
Frame = +2
Query: 2 GKPFVLPSVRKAEEILHSRGLNHEYAPISGEATYTDAVAKLAFGEDSPVIKNRSNCTVQT 181
GKP VL VR+AE+ L EY P+ G A D KLA+G++S IK++ VQT
Sbjct: 72 GKPVVLECVREAEKRLAGSTFM-EYLPMGGSAKMVDLTLKLAYGDNSEFIKDKRIAAVQT 130
Query: 182 LSGTGALRLGLEFITKHYAKAKEI 253
LSGTGA RL +F K ++ +I
Sbjct: 131 LSGTGACRLFADF-QKRFSPGSQI 153
Score = 55.6 bits (128), Expect = 3e-08
Identities = 23/44 (52%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Frame = +3
Query: 381 IKNS-RSSIILLHACAHNPTGVDPKPSDWEQLSKVIKERKLFPF 509
+KN+ S LLHACAHNPTGVDP W ++S++ K +K F F
Sbjct: 196 VKNAPEGSFFLLHACAHNPTGVDPTEEQWREISQLFKAKKHFAF 239
Score = 55.6 bits (128), Expect = 3e-08
Identities = 22/45 (48%), Positives = 35/45 (77%)
Frame = +2
Query: 491 KEIIPVFDMAYQGFANGDVDNDAFAVRLFVKEGHQVMLAQNFAKN 625
K+ FDMAYQGFA+GD DA ++R+F+++GH + ++Q++AKN
Sbjct: 234 KKHFAFFDMAYQGFASGDPARDAKSIRIFLEDGHHIGISQSYAKN 278
Score = 54.0 bits (124), Expect = 8e-08
Identities = 21/66 (31%), Positives = 30/66 (45%)
Frame = +1
Query: 256 LPTPTWGNHPQICNTLNLPHKKYRYFDPKTNGFDLQGALEDISKIPEVPLFCCTRAHTTP 435
+P PTW NH I +P K Y Y+ P+T G D ++D+ PE F P
Sbjct: 155 IPVPTWSNHHNIWKDAQVPQKTYHYYHPETKGLDFSALMDDVKNAPEGSFFLLHACAHNP 214
Query: 436 PVLTPS 453
+ P+
Sbjct: 215 TGVDPT 220
>At3g28860.1 68416.m03602 multidrug resistance P-glycoprotein,
putative similar to mdr-like P-glycoprotein GI:3849833
from [Arabidopsis thaliana]; contains Pfam profiles
PF00005: ABC transporter and PF00664: ABC transporter
transmembrane region; identical to cDNA MDR-like
p-glycoprotein (At3g28860) GI:24324261
Length = 1252
Score = 30.3 bits (65), Expect = 1.1
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Frame = +2
Query: 86 SGEATYTDAVAKLAFGEDSPVIKNRSNCTVQTLSGTGALRLGL--------EFITKHYAK 241
S E+ +A+ ++ G + V+ +R CT++ + ++ G E I K A
Sbjct: 537 SSESIVQEALDRVMVGRTTVVVAHRL-CTIRNVDSIAVIQQGQVVETGTHEELIAKSGAY 595
Query: 242 AKEICSRRLLGETTRKSATPSTCRTRNT 325
A I + ++G TR + PST RTR+T
Sbjct: 596 ASLIRFQEMVG--TRDFSNPSTRRTRST 621
>At3g19680.1 68416.m02493 expressed protein
Length = 491
Score = 29.9 bits (64), Expect = 1.4
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = -3
Query: 253 DLLCLSVVFRYELESESECASAGQCLYSTVAPIF 152
+++ + V+FR E ESE+ C+S+G STVA F
Sbjct: 55 EIVSVPVMFRTESESETRCSSSGN--VSTVAACF 86
>At3g54000.3 68416.m05969 expressed protein
Length = 301
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 4/45 (8%)
Frame = -3
Query: 364 PANRNHWSWDRSNGISCAAS*GCC----RFAGGFPK*ASGADLLC 242
PA +H +W+ + C A GCC RF S DL C
Sbjct: 97 PAGNDHKAWEMNRSPPCVAGTGCCCLNQRFNQNLNSRVSSWDLYC 141
>At3g54000.2 68416.m05968 expressed protein
Length = 301
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 4/45 (8%)
Frame = -3
Query: 364 PANRNHWSWDRSNGISCAAS*GCC----RFAGGFPK*ASGADLLC 242
PA +H +W+ + C A GCC RF S DL C
Sbjct: 97 PAGNDHKAWEMNRSPPCVAGTGCCCLNQRFNQNLNSRVSSWDLYC 141
>At3g54000.1 68416.m05970 expressed protein
Length = 352
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 4/45 (8%)
Frame = -3
Query: 364 PANRNHWSWDRSNGISCAAS*GCC----RFAGGFPK*ASGADLLC 242
PA +H +W+ + C A GCC RF S DL C
Sbjct: 97 PAGNDHKAWEMNRSPPCVAGTGCCCLNQRFNQNLNSRVSSWDLYC 141
>At1g75030.1 68414.m08715 pathogenesis-related thaumatin family
protein identical to thaumatin-like protein [Arabidopsis
thaliana] GI:2435406; contains Pfam profile: PF00314
Thaumatin family
Length = 246
Score = 29.1 bits (62), Expect = 2.5
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +1
Query: 400 PLFCCTRAHTTPPVLTPS 453
P FCCT AH TP +P+
Sbjct: 188 PEFCCTGAHATPQTCSPT 205
>At2g07750.1 68415.m01003 DEAD box RNA helicase, putative similar to
RNA helicase RH25 [Arabidopsis thaliana] GI:3776023;
contains Pfam profiles PF00270: DEAD/DEAH box helicase,
PF00271: Helicase conserved C-terminal domain
Length = 845
Score = 28.7 bits (61), Expect = 3.3
Identities = 26/99 (26%), Positives = 39/99 (39%), Gaps = 1/99 (1%)
Frame = +2
Query: 11 FVLPSVRKAEEILHSRGLNHEYAPISGEATY-TDAVAKLAFGEDSPVIKNRSNCTVQTLS 187
F+LP++ + ++S H+ API T +A E ++KN VQTL
Sbjct: 429 FLLPAIETVLKAMNSGKGVHKVAPIFVLILCPTRELASQIAAEGKALLKNHDGIGVQTLI 488
Query: 188 GTGALRLGLEFITKHYAKAKEICSRRLLGETTRKSATPS 304
G RL + + + RLL KS S
Sbjct: 489 GGTRFRLDQQRLESEPCQILIATPGRLLDHIENKSGLTS 527
>At1g45233.2 68414.m05190 expressed protein Since this genomic
sequence region is unfinished, the annotated gene may be
missing a stop codon or start codon
Length = 448
Score = 28.3 bits (60), Expect = 4.4
Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Frame = +2
Query: 107 DAVAKLAFGEDSP-VIKNRSNCTVQTLSGTGALRLGLEFITKHYAKAKEICSRRLLGETT 283
D +++ F D+P IK+ QTLS + L L+ + + KE+C R+ E
Sbjct: 118 DLISEQDFFSDAPEAIKS------QTLSNDSSHDLMLKRLNFELHQRKELCKLRVRLEQQ 171
Query: 284 RKSATPSTCRTRNTVTSIPRPMVSI 358
+KS S ++S+P + S+
Sbjct: 172 KKSLLESNAERNKFLSSLPVHLKSL 196
>At2g40200.1 68415.m04943 basic helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain
Length = 254
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +2
Query: 287 KSATPSTCRTRNTVTSIPRPMVSICREHSRIYQKFPKFHYS 409
K+ S C N +TS S+CR S+ + F HYS
Sbjct: 211 KALKQSLCSALNRITSSSTTTSSVCRIRSKRQRWFLSSHYS 251
>At4g08395.1 68417.m01387 hypothetical protein
Length = 232
Score = 27.5 bits (58), Expect = 7.7
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -3
Query: 499 NFLSLITLESCSQSLGLGSTPVGLC 425
+F S++ +E+CSQ LG VG C
Sbjct: 87 SFRSMVVIETCSQPLGSTVVVVGSC 111
>At1g75050.1 68414.m08717 thaumatin-like protein, putative /
pathogenesis-related protein, putative similar to
thaumatin-like protein [Arabidopsis thaliana]
GI:2435406, SP|P28493 Pathogenesis-related protein 5
precursor (PR-5) {Arabidopsis thaliana}; contains Pfam
profile: PF00314 Thaumatin family
Length = 257
Score = 27.5 bits (58), Expect = 7.7
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +1
Query: 406 FCCTRAHTTPPVLTPS 453
FCCT AH TP +P+
Sbjct: 201 FCCTGAHATPQTCSPT 216
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,149,651
Number of Sequences: 28952
Number of extensions: 351878
Number of successful extensions: 1154
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1096
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1151
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1275599520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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