Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS302B03f
(421 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase cyc... 94 3e-20
At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase cyc... 94 3e-20
At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase / c... 88 2e-18
At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase / c... 88 2e-18
At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase / c... 87 3e-18
At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase, pu... 87 6e-18
At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase, pu... 81 4e-16
At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase, cy... 80 5e-16
At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase, ch... 79 1e-15
At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase, pu... 78 3e-15
At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase / c... 77 6e-15
At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase, pu... 76 9e-15
At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase / c... 75 1e-14
At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase, pu... 75 2e-14
At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase, pu... 75 3e-14
At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase cyc... 72 1e-13
At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase cyc... 72 1e-13
At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase cyc... 72 2e-13
At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein, pu... 54 4e-08
At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase cyc... 53 9e-08
At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase cyc... 49 1e-06
At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase, pu... 47 6e-06
At1g74070.1 68414.m08579 peptidyl-prolyl cis-trans isomerase cyc... 44 6e-05
At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase cyc... 42 2e-04
At3g66654.3 68416.m00779 peptidyl-prolyl cis-trans isomerase cyc... 40 0.001
At3g66654.2 68416.m00778 peptidyl-prolyl cis-trans isomerase cyc... 40 0.001
At3g66654.1 68416.m00777 peptidyl-prolyl cis-trans isomerase cyc... 40 0.001
At5g35100.1 68418.m04153 peptidyl-prolyl cis-trans isomerase cyc... 38 0.002
At2g47320.1 68415.m05907 peptidyl-prolyl cis-trans isomerase cyc... 38 0.003
At1g26940.1 68414.m03284 peptidyl-prolyl cis-trans isomerase cyc... 31 0.24
At3g02610.1 68416.m00252 acyl-[acyl-carrier-protein] desaturase,... 30 0.73
At2g01890.1 68415.m00122 purple acid phosphatase, putative conta... 29 1.3
At1g04600.1 68414.m00454 myosin, putative similar to myosin (GI:... 29 1.7
At4g25840.1 68417.m03717 haloacid dehalogenase-like hydrolase fa... 27 5.2
At5g43900.1 68418.m05368 myosin heavy chain (MYA2) nearly identi... 26 9.0
At5g25930.1 68418.m03081 leucine-rich repeat family protein / pr... 26 9.0
At3g45190.1 68416.m04877 SIT4 phosphatase-associated family prot... 26 9.0
At2g33240.1 68415.m04072 myosin, putative similar to myosin (GI:... 26 9.0
>At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 259
Score = 94.3 bits (224), Expect = 3e-20
Identities = 44/63 (69%), Positives = 51/63 (80%)
Frame = +3
Query: 3 SMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVV 182
SMANAG +TNGSQFFI T+KT WLDGRHVVFG+V+EGM+VV+ IE T DRP K VV
Sbjct: 188 SMANAGPNTNGSQFFICTIKTSWLDGRHVVFGQVIEGMEVVKLIEEQETDRGDRPRKKVV 247
Query: 183 ISD 191
I+D
Sbjct: 248 IAD 250
>At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to SP|P87051
Peptidyl-prolyl cis-trans isomerase cyp2 (EC 5.2.1.8)
(Cyclophilin cyp2) {Schizosaccharomyces pombe}; contains
Pfam profiles PF00160: peptidyl-prolyl cis-trans
isomerase cyclophilin-type, PF00400: WD domain G-beta
repeat
Length = 631
Score = 94.3 bits (224), Expect = 3e-20
Identities = 43/61 (70%), Positives = 49/61 (80%)
Frame = +3
Query: 3 SMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVV 182
SMANAG +TNGSQFFITTV TPWLD +H VFG+V++GMDVVQ IE T NDRP +DV
Sbjct: 563 SMANAGPNTNGSQFFITTVATPWLDNKHTVFGRVVKGMDVVQGIEKVKTDKNDRPYQDVK 622
Query: 183 I 185
I
Sbjct: 623 I 623
>At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase /
cyclophilin / rotamase / cyclosporin A-binding protein
(ROC1) identical to SP|P34790 Peptidyl-prolyl cis-trans
isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin)
(Cyclosporin A-binding protein) {Arabidopsis thaliana}
Length = 172
Score = 88.2 bits (209), Expect = 2e-18
Identities = 41/63 (65%), Positives = 52/63 (82%)
Frame = +3
Query: 3 SMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVV 182
SMANAG +TNGSQFFI TVKT WLDG+HVVFG+V+EG+DVV+ IE V ++ +P K VV
Sbjct: 106 SMANAGANTNGSQFFICTVKTDWLDGKHVVFGQVVEGLDVVKAIE-KVGSSSGKPTKPVV 164
Query: 183 ISD 191
++D
Sbjct: 165 VAD 167
>At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP2) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443757|gb|AAB71402; similar
to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34790
Length = 174
Score = 88.2 bits (209), Expect = 2e-18
Identities = 41/63 (65%), Positives = 52/63 (82%)
Frame = +3
Query: 3 SMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVV 182
SMANAG +TNGSQFFI TVKT WLDG+HVVFG+V+EG+DVV+ IE + ++ +P K VV
Sbjct: 107 SMANAGANTNGSQFFICTVKTDWLDGKHVVFGQVVEGLDVVKAIE-KIGSSSGKPTKPVV 165
Query: 183 ISD 191
I+D
Sbjct: 166 IAD 168
>At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP5) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443755|gb|AAB71401
Length = 201
Score = 87.4 bits (207), Expect = 3e-18
Identities = 43/64 (67%), Positives = 50/64 (78%)
Frame = +3
Query: 3 SMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVV 182
SMAN+G+DTNGSQFFITTV T WLDGRHVVFGKV++GMDVV KIE + P VV
Sbjct: 134 SMANSGEDTNGSQFFITTVTTSWLDGRHVVFGKVVQGMDVVYKIE-AEGKQSGTPKSKVV 192
Query: 183 ISDT 194
I+D+
Sbjct: 193 IADS 196
>At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
(ROC7) similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 204
Score = 86.6 bits (205), Expect = 6e-18
Identities = 43/64 (67%), Positives = 48/64 (75%)
Frame = +3
Query: 3 SMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVV 182
SMANAG+DTNGSQFFITTV T WLDGRHVVFGKV+ GMDVV K+E + P VV
Sbjct: 137 SMANAGQDTNGSQFFITTVTTSWLDGRHVVFGKVVTGMDVVYKVE-AEGNQSGTPKSKVV 195
Query: 183 ISDT 194
I D+
Sbjct: 196 IVDS 199
>At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 228
Score = 80.6 bits (190), Expect = 4e-16
Identities = 36/45 (80%), Positives = 40/45 (88%)
Frame = +3
Query: 3 SMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIE 137
SMAN+G D+NGSQFFITTV T WLDG HVVFGKVL GM+VV+KIE
Sbjct: 161 SMANSGPDSNGSQFFITTVTTSWLDGHHVVFGKVLSGMEVVRKIE 205
>At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase,
cytosolic / cyclophilin / rotamase (ROC3) identical to
cytosolic cyclophilin [Arabidopsis thaliana] GI:1305455
Length = 173
Score = 80.2 bits (189), Expect = 5e-16
Identities = 40/63 (63%), Positives = 49/63 (77%)
Frame = +3
Query: 3 SMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVV 182
SMANAG +TNGSQFFI T KT WLDG+HVVFG+V+EG++VV+ IE V + R K VV
Sbjct: 107 SMANAGANTNGSQFFICTEKTSWLDGKHVVFGQVVEGLNVVRDIE-KVGSDSGRTSKPVV 165
Query: 183 ISD 191
I+D
Sbjct: 166 IAD 168
>At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase,
chloroplast / cyclophilin / rotamase / cyclosporin
A-binding protein (ROC4) identical to peptidyl-prolyl
cis-trans isomerase, chloroplast precursor, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34791; identical to
cDNA nuclear-encoded chloroplast stromal cyclophilin
(ROC4) GI:405130
Length = 260
Score = 79.0 bits (186), Expect = 1e-15
Identities = 37/57 (64%), Positives = 44/57 (77%)
Frame = +3
Query: 3 SMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVK 173
SMANAG +TNGSQFFI TVKT WLD +HVVFG+V+EGM +V+ +E T A D P K
Sbjct: 190 SMANAGPNTNGSQFFICTVKTSWLDNKHVVFGQVIEGMKLVRTLESQETRAFDVPKK 246
>At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 224
Score = 77.8 bits (183), Expect = 3e-15
Identities = 37/64 (57%), Positives = 46/64 (71%)
Frame = +3
Query: 3 SMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVV 182
+MAN G D+NGSQFFITTVK WL+G HVV GKV++GMD V IE + +P K VV
Sbjct: 149 AMANTGPDSNGSQFFITTVKASWLEGEHVVLGKVIQGMDNVFAIEGGAGTYSGKPRKKVV 208
Query: 183 ISDT 194
I+D+
Sbjct: 209 IADS 212
>At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase /
cyclophilin-40 (CYP40) / rotamase identical to
cyclophilin-40 [Arabidopsis thaliana] GI:13442983;
supporting cDNA gi|13442982|gb|AY026065.1|
Length = 361
Score = 76.6 bits (180), Expect = 6e-15
Identities = 37/63 (58%), Positives = 45/63 (71%)
Frame = +3
Query: 3 SMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVV 182
SMAN+G +TNGSQFFITT +T LDG+HVVFG+V +GM VV+ IE P +DVV
Sbjct: 107 SMANSGPNTNGSQFFITTTRTSHLDGKHVVFGRVTKGMGVVRSIEHVSIEEQSCPSQDVV 166
Query: 183 ISD 191
I D
Sbjct: 167 IHD 169
>At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
contains Pfam domain, PF00160: peptidyl-prolyl cis-trans
isomerase, cyclophilin-type
Length = 164
Score = 76.2 bits (179), Expect = 9e-15
Identities = 34/65 (52%), Positives = 45/65 (69%)
Frame = +3
Query: 3 SMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVV 182
SMANAG +TNGSQFFIT P LDG+H +FG+V GM+V++++ T DRP+ +V
Sbjct: 97 SMANAGPNTNGSQFFITLAPQPSLDGKHTIFGRVCRGMEVIKRLGSVQTDNTDRPIHEVK 156
Query: 183 ISDTK 197
I TK
Sbjct: 157 ILRTK 161
>At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP1) / rotamase identical to cyclophilin
(CYP1) gi|992643|gb|AAA75512; similar to peptidyl-prolyl
cis-trans isomerase, PPIase (cyclophilin, cyclosporin
A-binding protein) [Catharanthus roseus]
SWISS-PROT:Q39613
Length = 172
Score = 75.4 bits (177), Expect = 1e-14
Identities = 37/63 (58%), Positives = 48/63 (76%)
Frame = +3
Query: 3 SMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVV 182
SMAN+G +TNGSQFFI T KT WLDG+HVVFG+V++G+DVV+ IE V + + K V
Sbjct: 106 SMANSGPNTNGSQFFICTDKTSWLDGKHVVFGQVVKGLDVVKAIE-KVGSDSGKTSKVVT 164
Query: 183 ISD 191
I+D
Sbjct: 165 ITD 167
>At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Homo sapiens]
gi|3647230|gb|AAC60793
Length = 199
Score = 74.9 bits (176), Expect = 2e-14
Identities = 36/64 (56%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Frame = +3
Query: 3 SMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVL-EGMDVVQKIEMTVTGANDRPVKDV 179
SMAN+G +TNG QFFIT K WLD +HVVFG+VL +G+ V++KIE G N+RP V
Sbjct: 132 SMANSGPNTNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVMRKIENVAIGPNNRPKLAV 191
Query: 180 VISD 191
VI++
Sbjct: 192 VITE 195
>At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Catharanthus roseus] SWISS-PROT:Q39613
Length = 176
Score = 74.5 bits (175), Expect = 3e-14
Identities = 37/63 (58%), Positives = 46/63 (73%)
Frame = +3
Query: 3 SMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVV 182
SMAN+G +TNGSQFFI T KT WLDG+HVVFGKV++G +VV+ +E V P + VV
Sbjct: 106 SMANSGPNTNGSQFFICTEKTSWLDGKHVVFGKVVDGYNVVKAME-DVGSDMGNPSERVV 164
Query: 183 ISD 191
I D
Sbjct: 165 IED 167
>At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 387
Score = 72.1 bits (169), Expect = 1e-13
Identities = 35/63 (55%), Positives = 46/63 (73%)
Frame = +3
Query: 3 SMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVV 182
SMAN G +TNGSQFFI + P LDG+HVVFGKV+EGM V++K+E+ T ++ +P V
Sbjct: 110 SMANCGPNTNGSQFFILFKRQPHLDGKHVVFGKVVEGMAVIKKMELVGT-SDGKPTSPVK 168
Query: 183 ISD 191
I D
Sbjct: 169 IID 171
>At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 570
Score = 72.1 bits (169), Expect = 1e-13
Identities = 35/63 (55%), Positives = 46/63 (73%)
Frame = +3
Query: 3 SMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVV 182
SMAN G +TNGSQFFI + P LDG+HVVFGKV+EGM V++K+E+ T ++ +P V
Sbjct: 110 SMANCGPNTNGSQFFILFKRQPHLDGKHVVFGKVVEGMAVIKKMELVGT-SDGKPTSPVK 168
Query: 183 ISD 191
I D
Sbjct: 169 IID 171
>At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 160
Score = 71.7 bits (168), Expect = 2e-13
Identities = 31/59 (52%), Positives = 43/59 (72%)
Frame = +3
Query: 3 SMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDV 179
SMAN+G +TNGSQFFIT K P L+G + +FGKV+ G +V+ +E T TG DRP+ ++
Sbjct: 88 SMANSGPNTNGSQFFITYAKQPHLNGLYTIFGKVIHGFEVLDIMEKTQTGPGDRPLAEI 146
>At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein,
putative
Length = 506
Score = 54.0 bits (124), Expect = 4e-08
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Frame = +3
Query: 3 SMANAGKDTNGSQFFITTVKT-PWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDV 179
+MA+ G++ N SQF+ T +LDG+H VFG++ EG D + +I +RP K++
Sbjct: 95 AMASGGENLNASQFYFTLRDDLDYLDGKHTVFGQIAEGFDTLTRINEAYVDPKNRPYKNI 154
Query: 180 VISDTKTEVVAEPF 221
I T ++ +PF
Sbjct: 155 RIK--HTHILDDPF 166
>At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 595
Score = 52.8 bits (121), Expect = 9e-08
Identities = 27/78 (34%), Positives = 43/78 (55%)
Frame = +3
Query: 3 SMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVV 182
SMAN+G TNGSQFF+ L+ +H VFG V+ G+ + +E +DRP++++
Sbjct: 431 SMANSGPHTNGSQFFVLYKSATHLNYKHTVFGGVVGGLATLAAMENVPVDESDRPLEEIK 490
Query: 183 ISDTKTEVVAEPFSVTKE 236
I + V P++ E
Sbjct: 491 I--IEASVFVNPYTELDE 506
>At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 504
Score = 49.2 bits (112), Expect = 1e-06
Identities = 29/75 (38%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Frame = +3
Query: 3 SMANAGK-DTNGSQFFITTVKTPWLDGRHVVFGKVL-EGMDVVQKIEMTVTGANDRPVKD 176
+MANA ++NGSQFF T K WLD +H +FGKV + + + ++ T +DRP+ D
Sbjct: 100 AMANASSPNSNGSQFFFTLDKCDWLDKKHTIFGKVTGDSIYNLLRLGEVDTSKDDRPL-D 158
Query: 177 VVISDTKTEVVAEPF 221
EV+ PF
Sbjct: 159 PAPKILSVEVLWNPF 173
>At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase PPIase
(cyclophilin, cyclosporin A-binding protein) [Tomato]
SWISS-PROT:P21568
Length = 232
Score = 46.8 bits (106), Expect = 6e-06
Identities = 28/58 (48%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Frame = +3
Query: 24 DTNGSQFFITTVKTPW-LDGRHVVFGKVLEGMDVVQKIEMTVTGANDR-PVKDVVISD 191
D+NGSQF I +DG HVV GKV+EG+D+++ IE V R P K VVI+D
Sbjct: 106 DSNGSQFQIHMKDYGLQVDGDHVVIGKVVEGLDLMRNIEKEVITTTTRTPSKPVVIAD 163
>At1g74070.1 68414.m08579 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 317
Score = 43.6 bits (98), Expect = 6e-05
Identities = 31/66 (46%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Frame = +3
Query: 30 NGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIE--MTVTGANDRPVKDV--VISDTK 197
NG++F IT V +P L+ +V GKVLEGM VV+K+ TV P V VI D K
Sbjct: 230 NGTEFVITAVDSPELEDSVLVIGKVLEGMGVVEKMREVKTVRDNTSSPYFRVAKVIGD-K 288
Query: 198 TEVVAE 215
VVAE
Sbjct: 289 RAVVAE 294
>At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein weak similarity to
CARS-Cyp [Homo sapiens] GI:1117968; contains Pfam
profile PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 837
Score = 41.9 bits (94), Expect = 2e-04
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = +3
Query: 3 SMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIE 137
SM+ A +D GS F IT LD +VVFGK+++G ++++KIE
Sbjct: 110 SMSIADRDKFGSHFHITFRPNQQLDRNNVVFGKLIQGKEILKKIE 154
>At3g66654.3 68416.m00779 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 39.5 bits (88), Expect = 0.001
Identities = 20/50 (40%), Positives = 31/50 (62%)
Frame = +3
Query: 39 QFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVVIS 188
+ ITT P L+ + +VFG+VL+G DVVQ+IE T + +P + I+
Sbjct: 179 ELLITTAPIPDLNDQLIVFGRVLKGEDVVQEIEEVDTDEHFQPKSPIGIT 228
>At3g66654.2 68416.m00778 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 39.5 bits (88), Expect = 0.001
Identities = 20/50 (40%), Positives = 31/50 (62%)
Frame = +3
Query: 39 QFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVVIS 188
+ ITT P L+ + +VFG+VL+G DVVQ+IE T + +P + I+
Sbjct: 179 ELLITTAPIPDLNDQLIVFGRVLKGEDVVQEIEEVDTDEHFQPKSPIGIT 228
>At3g66654.1 68416.m00777 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 39.5 bits (88), Expect = 0.001
Identities = 20/50 (40%), Positives = 31/50 (62%)
Frame = +3
Query: 39 QFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVVIS 188
+ ITT P L+ + +VFG+VL+G DVVQ+IE T + +P + I+
Sbjct: 179 ELLITTAPIPDLNDQLIVFGRVLKGEDVVQEIEEVDTDEHFQPKSPIGIT 228
>At5g35100.1 68418.m04153 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 290
Score = 38.3 bits (85), Expect = 0.002
Identities = 21/44 (47%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = +3
Query: 24 DTNGSQFFITTVK--TPWLDGRHVVFGKVLEGMDVVQKIEMTVT 149
D +F ITT +P LDG ++VFG VLEG+DVV I T
Sbjct: 191 DYRNVEFLITTGPGPSPQLDGGNIVFGTVLEGLDVVTSISSIPT 234
>At2g47320.1 68415.m05907 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 230
Score = 37.9 bits (84), Expect = 0.003
Identities = 20/57 (35%), Positives = 31/57 (54%)
Frame = +3
Query: 15 AGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVVI 185
A + G +FFI + + L+ + VFG+V +G DVVQ+IE T +P + I
Sbjct: 165 AKNEQGGFEFFIVSAQIKDLNEKLTVFGRVSKGQDVVQEIEEVETDDQYQPKSPIEI 221
>At1g26940.1 68414.m03284 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 226
Score = 31.5 bits (68), Expect = 0.24
Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 8/74 (10%)
Frame = +3
Query: 36 SQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVT---GANDRPVKDVVI-----SD 191
S F + P LD ++ VFGKV +G + + K+E T G P + + I D
Sbjct: 134 SSFSMLLGNAPHLDRQYAVFGKVTKGDETLSKLEEVPTRREGIFVMPTERITILSTYYYD 193
Query: 192 TKTEVVAEPFSVTK 233
TK E E SV K
Sbjct: 194 TKMESCEEERSVLK 207
>At3g02610.1 68416.m00252 acyl-[acyl-carrier-protein] desaturase,
putative / stearoyl-ACP desaturase, putative similar to
Acyl-[acyl-carrier protein] desaturase from Spinacia
oleracea SP|P28645, Cucumis sativus SP|P32061, Ricinus
communis SP|P22337; contains Pfam profile PF03405 Fatty
acid desaturase
Length = 411
Score = 29.9 bits (64), Expect = 0.73
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = -1
Query: 235 SFVTLKGSATTSVFVSDITTSLTGRSFAPVTVISIFCTTSIPSKTLPKT 89
S +T+ V VS T+ G SF+P ++ + C + PSKT +T
Sbjct: 7 STITVAMKQNPLVAVSFPRTTCLGSSFSPPRLLRVSCVATNPSKTSEET 55
>At2g01890.1 68415.m00122 purple acid phosphatase, putative contains
Pfam profile: PF00149 calcineurin-like phosphoesterase;
identical to purple acid phosphatase (GI:20257479)
[Arabidopsis thaliana];
Length = 335
Score = 29.1 bits (62), Expect = 1.3
Identities = 14/52 (26%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = -3
Query: 275 LIIKTFIIN--LVSTLFCDTERFSYNFSFRVRYNNIFDWAIIRTRNSHLNFL 126
+ ++++++N +V F DT F + F ++++DW + RN +LN L
Sbjct: 146 ICLRSYVVNAEIVDIFFVDTTPFVDRY-FDEPKDHVYDWRGVLPRNKYLNSL 196
>At1g04600.1 68414.m00454 myosin, putative similar to myosin
(GI:499047) [Arabidopsis thaliana]
Length = 1730
Score = 28.7 bits (61), Expect = 1.7
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 8/61 (13%)
Frame = -3
Query: 194 RVRYNNIFDWAIIRTRNS--------HLNFLYNIHSF*NFTENNMSAI*PGCLNSCDEKL 39
++ Y+ +FDW + + NS H+ + +I+ F +F N+ C+N +EKL
Sbjct: 401 KIVYSKLFDWLVTKINNSIGQDPNSKHIIGVLDIYGFESFKTNSFEQF---CINLTNEKL 457
Query: 38 R 36
+
Sbjct: 458 Q 458
>At4g25840.1 68417.m03717 haloacid dehalogenase-like hydrolase
family protein low similarity to SP|Q08623 GS1 protein
{Homo sapiens}; contains InterPro accession IPR005834:
Haloacid dehalogenase-like hydrolase
Length = 298
Score = 27.1 bits (57), Expect = 5.2
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = -3
Query: 263 TFIINLVSTLFCDTERFSYNFSFRV--RYNNIFDWAI 159
T +I + L DTE+F ++ RYN FDW++
Sbjct: 72 THVIFDMDGLLLDTEKFYTEVQEKILARYNKTFDWSL 108
>At5g43900.1 68418.m05368 myosin heavy chain (MYA2) nearly identical
to PIR|S51824 myosin heavy chain MYA2 [Arabidopsis
thaliana]
Length = 1505
Score = 26.2 bits (55), Expect = 9.0
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 8/79 (10%)
Frame = -3
Query: 248 LVSTLFCDTERFSYNFSFRVRYNNIFDWAIIRTRNS--------HLNFLYNIHSF*NFTE 93
+ TL + S + +V Y+ +FDW + + +S +L + +I+ F +F
Sbjct: 384 ITKTLDPEAATLSRDALAKVMYSRLFDWLVDKINSSIGQDHDSKYLIGVLDIYGFESFKT 443
Query: 92 NNMSAI*PGCLNSCDEKLR 36
N+ C+N +EKL+
Sbjct: 444 NSFEQF---CINLTNEKLQ 459
>At5g25930.1 68418.m03081 leucine-rich repeat family protein / protein
kinase family protein contains similarity to
Swiss-Prot:P47735 receptor-like protein kinase 5
precursor [Arabidopsis thaliana]; contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 1005
Score = 26.2 bits (55), Expect = 9.0
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = -1
Query: 217 GSATTSVFVSDITTSLTGRSFAPVTVISIFCTTSIPS 107
G T F DI + T + V + + CT ++PS
Sbjct: 916 GKPTAEAFDEDIKEASTTEAMTTVFKLGLMCTNTLPS 952
>At3g45190.1 68416.m04877 SIT4 phosphatase-associated family protein
contains Pfam profile: PF04499 SIT4
phosphatase-associated protein
Length = 830
Score = 26.2 bits (55), Expect = 9.0
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +3
Query: 150 GANDRPVKDVVISDTKTEVVAEPFSVTKESAH*IY 254
G+NDR +DV D EVV + E A+ ++
Sbjct: 586 GSNDRDEEDVYFDDESAEVVISSLRLGDEQANNLF 620
>At2g33240.1 68415.m04072 myosin, putative similar to myosin
(GI:433663) [Arabidopsis thaliana]; myosin my5A
(SP:Q02440) {Gallus gallus}
Length = 1770
Score = 26.2 bits (55), Expect = 9.0
Identities = 15/61 (24%), Positives = 31/61 (50%), Gaps = 8/61 (13%)
Frame = -3
Query: 194 RVRYNNIFDWAIIRTRNS--------HLNFLYNIHSF*NFTENNMSAI*PGCLNSCDEKL 39
++ Y+ +FDW + + NS ++ + +I+ F +F N+ C+N +EKL
Sbjct: 418 KIVYSKLFDWLVTKINNSIGQDSSSKYIIGVLDIYGFESFKTNSFEQF---CINLTNEKL 474
Query: 38 R 36
+
Sbjct: 475 Q 475
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,486,400
Number of Sequences: 28952
Number of extensions: 130351
Number of successful extensions: 362
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 354
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 361
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 645327280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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