Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30097
(754 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g18080.1 68414.m02238 WD-40 repeat family protein / auxin-dep... 300 5e-82
At1g48630.1 68414.m05440 guanine nucleotide-binding family prote... 300 7e-82
At3g18130.1 68416.m02305 guanine nucleotide-binding family prote... 298 2e-81
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 105 2e-23
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 97 1e-20
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 94 1e-19
At4g02730.1 68417.m00372 transducin family protein / WD-40 repea... 89 3e-18
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 84 1e-16
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 82 4e-16
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 82 4e-16
At2g43770.1 68415.m05441 transducin family protein / WD-40 repea... 77 1e-14
At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuc... 77 1e-14
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 74 9e-14
At2g33340.2 68415.m04087 transducin family protein / WD-40 repea... 73 2e-13
At2g33340.1 68415.m04086 transducin family protein / WD-40 repea... 73 2e-13
At2g47410.1 68415.m05917 transducin family protein / WD-40 repea... 73 2e-13
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 69 3e-12
At5g50230.1 68418.m06221 transducin family protein / WD-40 repea... 66 2e-11
At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 66 2e-11
At5g56130.1 68418.m07002 transducin family protein / WD-40 repea... 66 3e-11
At4g29830.1 68417.m04246 transducin family protein / WD-40 repea... 66 3e-11
At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul... 65 4e-11
At1g04510.1 68414.m00442 transducin family protein / WD-40 repea... 65 4e-11
At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6 ... 64 1e-10
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 64 1e-10
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 64 1e-10
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 63 2e-10
At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha... 62 3e-10
At1g73720.1 68414.m08536 transducin family protein / WD-40 repea... 62 3e-10
At5g25150.1 68418.m02981 transducin family protein / WD-40 repea... 62 4e-10
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 61 9e-10
At3g18140.1 68416.m02306 transducin family protein / WD-40 repea... 61 9e-10
At1g52360.1 68414.m05909 coatomer protein complex, subunit beta ... 60 1e-09
At1g24130.1 68414.m03044 transducin family protein / WD-40 repea... 60 2e-09
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 59 4e-09
At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 ... 58 5e-09
At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 ... 58 5e-09
At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 ... 58 5e-09
At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 ... 58 5e-09
At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 ... 58 5e-09
At1g71840.1 68414.m08302 transducin family protein / WD-40 repea... 58 5e-09
At1g10580.1 68414.m01192 transducin family protein / WD-40 repea... 58 8e-09
At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 ... 57 1e-08
At2g46290.1 68415.m05758 eukaryotic translation initiation facto... 57 1e-08
At2g22040.1 68415.m02617 transducin family protein / WD-40 repea... 57 1e-08
At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta... 57 1e-08
At2g47990.1 68415.m06006 transducin family protein / WD-40 repea... 56 2e-08
At3g15980.3 68416.m02022 coatomer protein complex, subunit beta ... 56 3e-08
At3g15980.2 68416.m02021 coatomer protein complex, subunit beta ... 56 3e-08
At3g15980.1 68416.m02020 coatomer protein complex, subunit beta ... 56 3e-08
At2g05720.1 68415.m00613 transducin family protein / WD-40 repea... 56 3e-08
At1g47610.1 68414.m05288 transducin family protein / WD-40 repea... 56 3e-08
At5g64730.1 68418.m08140 transducin family protein / WD-40 repea... 56 3e-08
At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6 ... 56 3e-08
At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pf... 55 4e-08
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 55 4e-08
At2g19430.1 68415.m02267 transducin family protein / WD-40 repea... 55 4e-08
At5g50120.1 68418.m06207 transducin family protein / WD-40 repea... 55 6e-08
At5g49430.1 68418.m06116 transducin family protein / WD-40 repea... 55 6e-08
At4g05410.1 68417.m00823 transducin family protein / WD-40 repea... 55 6e-08
At1g79990.1 68414.m09356 coatomer protein complex, subunit beta ... 55 6e-08
At4g28450.1 68417.m04071 transducin family protein / WD-40 repea... 54 8e-08
At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pf... 54 8e-08
At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 ... 54 1e-07
At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 ... 54 1e-07
At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pf... 54 1e-07
At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 ... 54 1e-07
At3g49180.1 68416.m05375 transducin family protein / WD-40 repea... 54 1e-07
At3g18860.2 68416.m02396 transducin family protein / WD-40 repea... 54 1e-07
At3g18860.1 68416.m02395 transducin family protein / WD-40 repea... 54 1e-07
At2g46280.3 68415.m05757 eukaryotic translation initiation facto... 54 1e-07
At2g46280.2 68415.m05756 eukaryotic translation initiation facto... 54 1e-07
At2g46280.1 68415.m05755 eukaryotic translation initiation facto... 54 1e-07
At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogene... 54 1e-07
At1g24530.1 68414.m03088 transducin family protein / WD-40 repea... 54 1e-07
At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pf... 53 2e-07
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 53 2e-07
At3g05090.2 68416.m00553 transducin family protein / WD-40 repea... 53 2e-07
At3g05090.1 68416.m00552 transducin family protein / WD-40 repea... 53 2e-07
At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pf... 53 2e-07
At1g15440.2 68414.m01856 transducin family protein / WD-40 repea... 52 3e-07
At1g15440.1 68414.m01855 transducin family protein / WD-40 repea... 52 3e-07
At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 ... 52 4e-07
At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 p... 52 4e-07
At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10... 52 4e-07
At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10... 52 4e-07
At2g26490.1 68415.m03178 transducin family protein / WD-40 repea... 52 5e-07
At2g01330.1 68415.m00050 transducin family protein / WD-40 repea... 51 7e-07
At1g15470.1 68414.m01860 transducin family protein / WD-40 repea... 51 7e-07
At5g08560.1 68418.m01018 transducin family protein / WD-40 repea... 51 9e-07
At3g18060.1 68416.m02297 transducin family protein / WD-40 repea... 51 9e-07
At4g03020.1 68417.m00410 transducin family protein / WD-40 repea... 50 2e-06
At2g26060.1 68415.m03129 transducin family protein / WD-40 repea... 49 4e-06
At3g15610.1 68416.m01980 transducin family protein / WD-40 repea... 48 5e-06
At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1 pro... 48 7e-06
At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pf... 48 7e-06
At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pf... 48 7e-06
At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pf... 48 9e-06
At3g45620.1 68416.m04927 transducin family protein / WD-40 repea... 47 1e-05
At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pf... 46 2e-05
At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat fam... 46 2e-05
At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5 ... 46 3e-05
At4g04940.1 68417.m00718 transducin family protein / WD-40 repea... 46 3e-05
At1g52730.2 68414.m05959 transducin family protein / WD-40 repea... 46 4e-05
At1g52730.1 68414.m05958 transducin family protein / WD-40 repea... 46 4e-05
At5g43930.1 68418.m05374 transducin family protein / WD-40 repea... 45 6e-05
At5g43920.1 68418.m05372 transducin family protein / WD-40 repea... 44 8e-05
At3g50390.1 68416.m05512 transducin family protein / WD-40 repea... 44 1e-04
At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5 ... 44 1e-04
At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochro... 44 1e-04
At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochro... 44 1e-04
At1g49450.1 68414.m05543 transducin family protein / WD-40 repea... 44 1e-04
At3g44530.1 68416.m04786 transducin family protein / WD-40 repea... 44 1e-04
At1g80670.1 68414.m09466 transducin family protein / WD-40 repea... 44 1e-04
At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6 ... 43 2e-04
At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6 ... 43 2e-04
At4g32990.1 68417.m04692 transducin family protein / WD-40 repea... 43 2e-04
At4g18900.1 68417.m02786 transducin family protein / WD-40 repea... 43 3e-04
At4g07410.1 68417.m01136 transducin family protein / WD-40 repea... 43 3e-04
At3g18950.1 68416.m02405 transducin family protein / WD-40 repea... 43 3e-04
At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochro... 42 3e-04
At1g29260.1 68414.m03578 peroxisomal targeting signal type 2 rec... 42 3e-04
At1g27470.1 68414.m03349 transducin-related / WD-40 repeat prote... 42 3e-04
At3g51930.1 68416.m05696 transducin family protein / WD-40 repea... 42 4e-04
At3g10530.1 68416.m01264 transducin family protein / WD-40 repea... 42 4e-04
At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4 pro... 42 6e-04
At3g53390.1 68416.m05892 transducin family protein / WD-40 repea... 42 6e-04
At5g66240.2 68418.m08345 transducin family protein / WD-40 repea... 41 8e-04
At5g66240.1 68418.m08344 transducin family protein / WD-40 repea... 41 8e-04
At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2 pro... 41 8e-04
At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5 ... 41 8e-04
At4g00090.1 68417.m00009 transducin family protein / WD-40 repea... 41 8e-04
At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1) ide... 41 8e-04
At1g03110.1 68414.m00288 transducin family protein / WD-40 repea... 41 8e-04
At5g10940.1 68418.m01269 transducin family protein / WD-40 repea... 41 0.001
At4g35140.1 68417.m04996 transducin family protein / WD-40 repea... 40 0.001
At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pf... 40 0.001
At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pf... 40 0.001
At5g27945.1 68418.m03364 transducin family protein / WD-40 repea... 40 0.002
At4g01860.2 68417.m00244 transducin family protein / WD-40 repea... 40 0.002
At4g01860.1 68417.m00243 transducin family protein / WD-40 repea... 40 0.002
At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5 ... 40 0.002
At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6 ... 39 0.003
At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5 ... 39 0.004
At4g35370.1 68417.m05025 transducin family protein / WD-40 repea... 39 0.004
At4g29860.1 68417.m04250 transducin family protein / WD-40 repea... 39 0.004
At2g37160.1 68415.m04559 transducin family protein / WD-40 repea... 39 0.004
At1g04140.2 68414.m00404 transducin family protein / WD-40 repea... 39 0.004
At1g04140.1 68414.m00403 transducin family protein / WD-40 repea... 39 0.004
At5g64630.2 68418.m08122 transducin family protein / WD-40 repea... 38 0.005
At5g64630.1 68418.m08121 transducin family protein / WD-40 repea... 38 0.005
At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10... 38 0.005
At5g23730.1 68418.m02782 transducin family protein / WD-40 repea... 38 0.007
At4g38480.1 68417.m05438 transducin family protein / WD-40 repea... 38 0.007
At5g64630.3 68418.m08123 transducin family protein / WD-40 repea... 38 0.009
At2g16405.1 68415.m01878 transducin family protein / WD-40 repea... 38 0.009
At3g27640.1 68416.m03452 transducin family protein / WD-40 repea... 37 0.012
At5g15550.2 68418.m01821 transducin family protein / WD-40 repea... 37 0.017
At5g15550.1 68418.m01820 transducin family protein / WD-40 repea... 37 0.017
At2g40360.1 68415.m04977 transducin family protein / WD-40 repea... 37 0.017
At3g42660.1 68416.m04436 transducin family protein / WD-40 repea... 36 0.022
At2g30050.1 68415.m03654 transducin family protein / WD-40 repea... 36 0.022
At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2 ... 36 0.022
At1g15850.1 68414.m01902 transducin family protein / WD-40 repea... 36 0.022
At3g20740.1 68416.m02624 fertilization-independent endosperm pro... 36 0.029
At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pf... 36 0.029
At4g34380.1 68417.m04884 transducin family protein / WD-40 repea... 36 0.038
At3g06880.1 68416.m00817 transducin family protein / WD-40 repea... 36 0.038
At1g65030.1 68414.m07371 transducin family protein / WD-40 repea... 36 0.038
At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 ... 36 0.038
At5g05970.1 68418.m00661 transducin family protein / WD-40 repea... 35 0.050
At1g21650.1 68414.m02710 preprotein translocase secA family prot... 35 0.050
At5g45760.2 68418.m05626 transducin family protein / WD-40 repea... 35 0.067
At5g45760.1 68418.m05625 transducin family protein / WD-40 repea... 35 0.067
At5g50650.1 68418.m06276 WD-40 repeat family protein / St12p pro... 34 0.088
At5g50550.1 68418.m06260 WD-40 repeat family protein / St12p pro... 34 0.088
At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5 ... 34 0.088
At4g21520.1 68417.m03110 transducin family protein / WD-40 repea... 34 0.088
At2g20330.1 68415.m02374 transducin family protein / WD-40 repea... 34 0.12
At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 ... 33 0.15
At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 ... 33 0.15
At3g01340.1 68416.m00051 protein transport protein SEC13 family ... 33 0.15
At3g52190.1 68416.m05731 transducin family protein / WD-40 repea... 33 0.20
At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-rel... 33 0.20
At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-rel... 33 0.20
At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3 pro... 33 0.27
At2g18900.1 68415.m02205 transducin family protein / WD-40 repea... 33 0.27
At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pf... 33 0.27
At3g26480.1 68416.m03301 transducin family protein / WD-40 repea... 32 0.36
At3g21060.1 68416.m02662 transducin family protein / WD-40 repea... 32 0.36
At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic c... 32 0.36
At1g49540.1 68414.m05553 transducin family protein / WD-40 repea... 32 0.36
At5g58760.1 68418.m07360 transducin family protein / WD-40 repea... 32 0.47
At4g21130.1 68417.m03055 transducin family protein / WD-40 repea... 32 0.47
At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochro... 32 0.47
At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic c... 31 0.62
At5g14530.1 68418.m01703 transducin family protein / WD-40 repea... 31 0.82
At5g60940.2 68418.m07645 transducin family protein / WD-40 repea... 31 1.1
At5g60940.1 68418.m07644 transducin family protein / WD-40 repea... 31 1.1
At5g14050.1 68418.m01644 transducin family protein / WD-40 repea... 31 1.1
At5g05570.1 68418.m00605 transducin family protein / WD-40 repea... 31 1.1
At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 ... 30 1.4
At4g34280.1 68417.m04873 transducin family protein / WD-40 repea... 30 1.9
At2g46560.1 68415.m05808 transducin family protein / WD-40 repea... 30 1.9
At4g18905.1 68417.m02787 transducin family protein / WD-40 repea... 29 2.5
At3g49400.1 68416.m05400 transducin family protein / WD-40 repea... 29 2.5
At1g69350.1 68414.m07958 pentatricopeptide (PPR) repeat-containi... 29 2.5
At1g27840.1 68414.m03412 transducin family protein / WD-40 repea... 29 2.5
At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8 ... 29 3.3
At2g25420.1 68415.m03045 transducin family protein / WD-40 repea... 29 3.3
At4g29380.1 68417.m04197 protein kinase family protein / WD-40 r... 29 4.4
At1g64350.1 68414.m07292 transducin family protein / WD-40 repea... 29 4.4
At1g63360.1 68414.m07162 disease resistance protein (CC-NBS-LRR ... 29 4.4
At1g62630.1 68414.m07066 disease resistance protein (CC-NBS-LRR ... 29 4.4
At5g13850.1 68418.m01619 nascent polypeptide-associated complex ... 28 5.8
At3g12390.1 68416.m01544 nascent polypeptide associated complex ... 28 5.8
At1g78770.1 68414.m09180 cell division cycle family protein simi... 28 5.8
At5g01290.1 68418.m00039 mRNA capping enzyme family protein simi... 28 7.7
At4g07800.1 68417.m01233 hypothetical protein 28 7.7
>At1g18080.1 68414.m02238 WD-40 repeat family protein /
auxin-dependent protein (ARCA) / guanine
nucleotide-binding protein beta subunit, putative
identical to SP|O24456 Guanine nucleotide-binding
protein beta subunit-like protein (WD-40 repeat
auxin-dependent protein ARCA) {Arabidopsis thaliana};
contains 7 WD-40 repeats (PF00400)
Length = 327
Score = 300 bits (737), Expect = 5e-82
Identities = 138/221 (62%), Positives = 166/221 (75%), Gaps = 10/221 (4%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQD--DGHSDWVSCVRFSPNHA 177
HTKDVLSVAFS+DNRQIVS SRD+TIKLWNTL ECKYTI + +GH DWVSCVRFSPN
Sbjct: 104 HTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTL 163
Query: 178 NPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 357
P IVS WD+TVKVW+L+NCKL+ GH+GY++TV VSPDGSLCASGGKD +LWDL
Sbjct: 164 QPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDL 223
Query: 358 NDGKHLHTLDHNDIITALCFSPNRYWLCAAFGPSIKIWDLESKEMVEELRPEIINQTQTS 537
+GK L++L+ N +I ALCFSPNRYWLCAA IKIWDLESK +VE+L+ ++ + + +
Sbjct: 224 AEGKKLYSLEANSVIHALCFSPNRYWLCAATEHGIKIWDLESKSIVEDLKVDLKAEAEKA 283
Query: 538 KTDPP--------QCLSLAWSTDGQTLFAGYSDNTIRVWQV 636
P C SL WS DG TLF+GY+D IRVW +
Sbjct: 284 DNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGI 324
Score = 66.1 bits (154), Expect = 2e-11
Identities = 61/224 (27%), Positives = 101/224 (45%), Gaps = 12/224 (5%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQI-VSGSRDKTIKLWNTLAECK-YTIQD---DGHSDWVSCVRFSP 168
HT V ++A +DN I VS SRDK+I LW + K Y + GHS +V V S
Sbjct: 14 HTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSS 73
Query: 169 NHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAML 348
+ +S WD +++W L +GH+ + +V S D S +D L
Sbjct: 74 D--GQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKL 131
Query: 349 WD-LNDGKHLHT---LDHNDIITALCFSPNRYW---LCAAFGPSIKIWDLESKEMVEELR 507
W+ L + K+ + H D ++ + FSPN + A++ ++K+W+L + +LR
Sbjct: 132 WNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNC----KLR 187
Query: 508 PEIINQTQTSKTDPPQCLSLAWSTDGQTLFAGYSDNTIRVWQVS 639
+ T T +A S DG +G D + +W ++
Sbjct: 188 STLAGHTGYVST-------VAVSPDGSLCASGGKDGVVLLWDLA 224
Score = 64.9 bits (151), Expect = 5e-11
Identities = 57/172 (33%), Positives = 87/172 (50%), Gaps = 9/172 (5%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 183
H+ V V S D + +SGS D ++LW+ LA T + GH+ V V FS + N
Sbjct: 62 HSHFVEDVVLSSDGQFALSGSWDGELRLWD-LAAGVSTRRFVGHTKDVLSVAFSLD--NR 118
Query: 184 IIVSCGWDRTVKVWH-LTNCKLKINH--LGHSGYLNTVTVSPD--GSLCASGGKDMKAML 348
IVS DRT+K+W+ L CK I+ GH +++ V SP+ S D +
Sbjct: 119 QIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKV 178
Query: 349 WDLNDGKHLHTL-DHNDIITALCFSPNRYWLCAAFGPS--IKIWDL-ESKEM 492
W+L++ K TL H ++ + SP+ LCA+ G + +WDL E K++
Sbjct: 179 WNLSNCKLRSTLAGHTGYVSTVAVSPDGS-LCASGGKDGVVLLWDLAEGKKL 229
>At1g48630.1 68414.m05440 guanine nucleotide-binding family protein
/ activated protein kinase C receptor, putative / RACK,
putative contains 7 WD-40 repeats (PF00400); very
similar to guanine nucleotide-binding protein; activated
protein kinase C receptor; RACK1 (GI:9294068)
{Arabidopsis thaliana}; similar to WD-40 repeat
auxin-dependent protein ARCA (SP:O24456) [Arabidopsis
thaliana];
Length = 326
Score = 300 bits (736), Expect = 7e-82
Identities = 141/220 (64%), Positives = 165/220 (75%), Gaps = 9/220 (4%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQD-DGHSDWVSCVRFSPNHAN 180
HTKDVLSVAFS DNRQIVS SRD+TIKLWNTL ECKYTI + DGH +WVSCVRFSPN
Sbjct: 104 HTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEADGHKEWVSCVRFSPNTLV 163
Query: 181 PIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLN 360
P IVS WD+TVKVW+L NCKL+ GHSGYLNTV VSPDGSLCASGGKD +LWDL
Sbjct: 164 PTIVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLA 223
Query: 361 DGKHLHTLDHNDIITALCFSPNRYWLCAAFGPSIKIWDLESKEMVEELRPEIINQTQT-- 534
+GK L++L+ II +LCFSPNRYWLCAA SI+IWDLESK +VE+L+ ++ + +
Sbjct: 224 EGKKLYSLEAGSIIHSLCFSPNRYWLCAATENSIRIWDLESKSVVEDLKVDLKAEAEKTD 283
Query: 535 ------SKTDPPQCLSLAWSTDGQTLFAGYSDNTIRVWQV 636
+KT C SL WS DG TLF+GY+D IRVW +
Sbjct: 284 GSTGIGNKTKVIYCTSLNWSADGNTLFSGYTDGVIRVWGI 323
Score = 70.1 bits (164), Expect = 1e-12
Identities = 69/219 (31%), Positives = 108/219 (49%), Gaps = 8/219 (3%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 183
H+ V V S D + +SGS D ++LW+ LA + T + GH+ V V FS + N
Sbjct: 62 HSHFVQDVVLSSDGQFALSGSWDGELRLWD-LATGESTRRFVGHTKDVLSVAFSTD--NR 118
Query: 184 IIVSCGWDRTVKVWH-LTNCKLKINHL-GHSGYLNTVTVSPDGSL--CASGGKDMKAMLW 351
IVS DRT+K+W+ L CK I+ GH +++ V SP+ + S D +W
Sbjct: 119 QIVSASRDRTIKLWNTLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVW 178
Query: 352 DLNDGKHLHTL-DHNDIITALCFSPNRYWLCAAFGPS--IKIWDL-ESKEMVEELRPEII 519
+L + K +TL H+ + + SP+ LCA+ G I +WDL E K++ II
Sbjct: 179 NLQNCKLRNTLAGHSGYLNTVAVSPDGS-LCASGGKDGVILLWDLAEGKKLYSLEAGSII 237
Query: 520 NQTQTSKTDPPQCLSLAWSTDGQTLFAGYSDNTIRVWQV 636
+ SL +S + L A ++N+IR+W +
Sbjct: 238 H-------------SLCFSPNRYWLCAA-TENSIRIWDL 262
Score = 68.5 bits (160), Expect = 4e-12
Identities = 62/223 (27%), Positives = 104/223 (46%), Gaps = 11/223 (4%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQ-IVSGSRDKTIKLWNTLAECK-YTIQD---DGHSDWVSCVRFSP 168
HT V ++A VDN IV+ SRDK+I LW E K Y + GHS +V V S
Sbjct: 14 HTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLSS 73
Query: 169 NHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAML 348
+ +S WD +++W L + +GH+ + +V S D S +D L
Sbjct: 74 D--GQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKL 131
Query: 349 WD-LNDGKH-LHTLD-HNDIITALCFSPNRY---WLCAAFGPSIKIWDLESKEMVEELRP 510
W+ L + K+ + D H + ++ + FSPN + A++ ++K+W+L++ +LR
Sbjct: 132 WNTLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNC----KLRN 187
Query: 511 EIINQTQTSKTDPPQCLSLAWSTDGQTLFAGYSDNTIRVWQVS 639
+ + T +A S DG +G D I +W ++
Sbjct: 188 TLAGHSGYLNT-------VAVSPDGSLCASGGKDGVILLWDLA 223
>At3g18130.1 68416.m02305 guanine nucleotide-binding family protein
/ activated protein kinase C receptor (RACK1) identical
to guanine nucleotide-binding protein; activated protein
kinase C receptor; RACK1 (GI:9294068) {Arabidopsis
thaliana}; contains Pfam profile: PF00400 WD domain,
G-beta repeat (7 copies)
Length = 326
Score = 298 bits (732), Expect = 2e-81
Identities = 139/220 (63%), Positives = 169/220 (76%), Gaps = 9/220 (4%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQD-DGHSDWVSCVRFSPNHAN 180
HTKDVLSVAFS DNRQIVS SRD+TIKLWNTL ECKYTI + DGH +WVSCVRFSPN
Sbjct: 104 HTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEGDGHKEWVSCVRFSPNTLV 163
Query: 181 PIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLN 360
P IVS WD+TVKVW+L NCKL+ + +GHSGYLNTV VSPDGSLCASGGKD +LWDL
Sbjct: 164 PTIVSASWDKTVKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLA 223
Query: 361 DGKHLHTLDHNDIITALCFSPNRYWLCAAFGPSIKIWDLESKEMVEELRPEIINQTQTSK 540
+GK L++L+ II +LCFSPNRYWLCAA SI+IWDLESK +VE+L+ ++ ++ + ++
Sbjct: 224 EGKKLYSLEAGSIIHSLCFSPNRYWLCAATENSIRIWDLESKSVVEDLKVDLKSEAEKNE 283
Query: 541 ----TDPPQ----CLSLAWSTDGQTLFAGYSDNTIRVWQV 636
T + C SL WS DG TLF+GY+D +RVW +
Sbjct: 284 GGVGTGNQKKVIYCTSLNWSADGSTLFSGYTDGVVRVWGI 323
Score = 68.1 bits (159), Expect = 6e-12
Identities = 59/223 (26%), Positives = 104/223 (46%), Gaps = 11/223 (4%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQI-VSGSRDKTIKLWNTLAECK-YTIQD---DGHSDWVSCVRFSP 168
HT V ++A +DN I V+ SRDK+I LW + K Y + GHS +V V S
Sbjct: 14 HTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDVVLSS 73
Query: 169 NHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAML 348
+ +S WD +++W L + +GH+ + +V S D S +D L
Sbjct: 74 D--GQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKL 131
Query: 349 WD-LNDGKHLHTL--DHNDIITALCFSPNRY---WLCAAFGPSIKIWDLESKEMVEELRP 510
W+ L + K+ + H + ++ + FSPN + A++ ++K+W+L++ +LR
Sbjct: 132 WNTLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNC----KLRN 187
Query: 511 EIINQTQTSKTDPPQCLSLAWSTDGQTLFAGYSDNTIRVWQVS 639
++ + T +A S DG +G D I +W ++
Sbjct: 188 SLVGHSGYLNT-------VAVSPDGSLCASGGKDGVILLWDLA 223
Score = 66.9 bits (156), Expect = 1e-11
Identities = 68/219 (31%), Positives = 108/219 (49%), Gaps = 8/219 (3%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 183
H+ V V S D + +SGS D ++LW+ LA + T + GH+ V V FS + N
Sbjct: 62 HSHFVEDVVLSSDGQFALSGSWDGELRLWD-LATGETTRRFVGHTKDVLSVAFSTD--NR 118
Query: 184 IIVSCGWDRTVKVWH-LTNCKLKINH-LGHSGYLNTVTVSPDGSL--CASGGKDMKAMLW 351
IVS DRT+K+W+ L CK I+ GH +++ V SP+ + S D +W
Sbjct: 119 QIVSASRDRTIKLWNTLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVW 178
Query: 352 DLNDGKHLHTL-DHNDIITALCFSPNRYWLCAAFGPS--IKIWDL-ESKEMVEELRPEII 519
+L + K ++L H+ + + SP+ LCA+ G I +WDL E K++ II
Sbjct: 179 NLQNCKLRNSLVGHSGYLNTVAVSPDGS-LCASGGKDGVILLWDLAEGKKLYSLEAGSII 237
Query: 520 NQTQTSKTDPPQCLSLAWSTDGQTLFAGYSDNTIRVWQV 636
+ SL +S + L A ++N+IR+W +
Sbjct: 238 H-------------SLCFSPNRYWLCAA-TENSIRIWDL 262
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 105 bits (253), Expect = 2e-23
Identities = 69/217 (31%), Positives = 113/217 (52%), Gaps = 5/217 (2%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQD-DGHSDWVSCVRFSPNHAN 180
H + VAFS D R IVS S DKT+KLW+ E I+ GH+++ CV F+P +
Sbjct: 70 HENGISDVAFSSDARFIVSASDDKTLKLWDV--ETGSLIKTLIGHTNYAFCVNFNPQ--S 125
Query: 181 PIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLN 360
+IVS +D TV++W +T K HS + V + DGSL S D +WD
Sbjct: 126 NMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSG 185
Query: 361 DGKHLHTL--DHNDIITALCFSPN-RYWLCAAFGPSIKIWDLESKEMVEELRPEIINQTQ 531
G + TL D N ++ + FSPN ++ L ++++W++ S + ++ T
Sbjct: 186 TGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLK---------TY 236
Query: 532 TSKTDPPQCLSLAWS-TDGQTLFAGYSDNTIRVWQVS 639
T + C+S A+S T+G+ + +G DN + +W+++
Sbjct: 237 TGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELN 273
Score = 92.3 bits (219), Expect = 3e-19
Identities = 66/218 (30%), Positives = 108/218 (49%), Gaps = 6/218 (2%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLW--NTLAE-CKYTIQD-DGHSDWVSCVRFSPN 171
H + V SV FS D R + S S DKTI+ + NT+ + +Q+ GH + +S V FS +
Sbjct: 23 HNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAFSSD 82
Query: 172 HANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 351
IVS D+T+K+W + L +GH+ Y V +P ++ SG D +W
Sbjct: 83 AR--FIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIW 140
Query: 352 DLNDGKHLHTLD-HNDIITALCFS-PNRYWLCAAFGPSIKIWDLESKEMVEELRPEIINQ 525
D+ GK L L H+D +TA+ F+ + +++ +IWD + V +
Sbjct: 141 DVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCV---------K 191
Query: 526 TQTSKTDPPQCLSLAWSTDGQTLFAGYSDNTIRVWQVS 639
T +PP + +S +G+ + G DNT+R+W +S
Sbjct: 192 TLIDDENPPVSF-VRFSPNGKFILVGTLDNTLRLWNIS 228
Score = 63.3 bits (147), Expect = 2e-10
Identities = 55/216 (25%), Positives = 99/216 (45%), Gaps = 7/216 (3%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDDGHSDWVSCVRFSPNHAN 180
HT V F+ + IVSGS D+T+++W+ T +C + HSD V+ V F N
Sbjct: 112 HTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLP--AHSDPVTAVDF--NRDG 167
Query: 181 PIIVSCGWDRTVKVWHL-TNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 357
+IVS +D ++W T +K + ++ V SP+G G D LW++
Sbjct: 168 SLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNI 227
Query: 358 NDGKHLHT-LDHND----IITALCFSPNRYWLCAAFGPSIKIWDLESKEMVEELRPEIIN 522
+ K L T H + I +A + + + + + +W+L SK+++++L
Sbjct: 228 SSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLE----G 283
Query: 523 QTQTSKTDPPQCLSLAWSTDGQTLFAGYSDNTIRVW 630
T+T +++A + +G D T+R+W
Sbjct: 284 HTET-------VMNVACHPTENLIASGSLDKTVRIW 312
Score = 54.4 bits (125), Expect = 8e-08
Identities = 36/118 (30%), Positives = 55/118 (46%), Gaps = 1/118 (0%)
Frame = +1
Query: 1 DHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHAN 180
D V V FS + + I+ G+ D T++LWN ++ K+ GH + C+ + + N
Sbjct: 196 DENPPVSFVRFSPNGKFILVGTLDNTLRLWN-ISSAKFLKTYTGHVNAQYCISSAFSVTN 254
Query: 181 -PIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 351
IVS D V +W L + KL GH+ + V P +L ASG D +W
Sbjct: 255 GKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIW 312
Score = 32.7 bits (71), Expect = 0.27
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE 105
HT+ V++VA I SGS DKT+++W E
Sbjct: 284 HTETVMNVACHPTENLIASGSLDKTVRIWTQKKE 317
>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
subunit, putative similar to contains 6 WD-40 repeats
(PF00400); katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 974
Score = 96.7 bits (230), Expect = 1e-20
Identities = 67/205 (32%), Positives = 93/205 (45%), Gaps = 2/205 (0%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 183
HT V SVAF+ + +++G+ IKLW+ L E K GH S V F P
Sbjct: 6 HTSPVDSVAFNSEEVLVLAGASSGVIKLWD-LEESKMVRAFTGHRSNCSAVEFHP--FGE 62
Query: 184 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 363
+ S D ++VW + GH+ ++T+ SPDG SGG D +WDL
Sbjct: 63 FLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTA 122
Query: 364 GKHLHTLD-HNDIITALCFSPNRYWLCAAFGP-SIKIWDLESKEMVEELRPEIINQTQTS 537
GK LH H I +L F P + L ++K WDLE+ E++ RPE
Sbjct: 123 GKLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGTTRPEATG----- 177
Query: 538 KTDPPQCLSLAWSTDGQTLFAGYSD 612
++A+ DGQTLF G D
Sbjct: 178 ------VRAIAFHPDGQTLFCGLDD 196
Score = 41.5 bits (93), Expect = 6e-04
Identities = 29/128 (22%), Positives = 57/128 (44%), Gaps = 2/128 (1%)
Frame = +1
Query: 262 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD-HNDIITALCFSPNRYWL 438
GH+ +++V + + L +G LWDL + K + H +A+ F P +L
Sbjct: 5 GHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFL 64
Query: 439 CAAFGPS-IKIWDLESKEMVEELRPEIINQTQTSKTDPPQCLSLAWSTDGQTLFAGYSDN 615
+ + +++WD K + QT K ++ +S DG+ + +G DN
Sbjct: 65 ASGSSDTNLRVWDTRKKGCI-----------QTYKGHTRGISTIEFSPDGRWVVSGGLDN 113
Query: 616 TIRVWQVS 639
++VW ++
Sbjct: 114 VVKVWDLT 121
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 93.9 bits (223), Expect = 1e-19
Identities = 65/206 (31%), Positives = 92/206 (44%), Gaps = 2/206 (0%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 183
HT V SVAF +++G+ IKLW+ + E K GH S V F P
Sbjct: 57 HTSAVDSVAFDSAEVLVLAGASSGVIKLWD-VEEAKMVRAFTGHRSNCSAVEFHP--FGE 113
Query: 184 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 363
+ S D +K+W + + GHS ++T+ +PDG SGG D +WDL
Sbjct: 114 FLASGSSDANLKIWDIRKKGCIQTYKGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDLTA 173
Query: 364 GKHLHTLD-HNDIITALCFSPNRYWLCAAFGP-SIKIWDLESKEMVEELRPEIINQTQTS 537
GK LH H I +L F P + L ++K WDLE+ E++ RPE
Sbjct: 174 GKLLHEFKFHEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEATG----- 228
Query: 538 KTDPPQCLSLAWSTDGQTLFAGYSDN 615
S+ + DG+TLF G D+
Sbjct: 229 ------VRSIKFHPDGRTLFCGLDDS 248
Score = 49.2 bits (112), Expect = 3e-06
Identities = 39/184 (21%), Positives = 80/184 (43%), Gaps = 3/184 (1%)
Frame = +1
Query: 97 LAECKYTIQDD-GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSG 273
+A+ Y +Q+ HS V+C+ + + ++ G D V +W + ++ GH+
Sbjct: 1 MAKRGYKLQEFLAHSANVNCLSIGKKTSR-LFITGGDDYKVNLWAIGKPTSLMSLCGHTS 59
Query: 274 YLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL-DHNDIITALCFSP-NRYWLCAA 447
+++V L +G LWD+ + K + H +A+ F P + +
Sbjct: 60 AVDSVAFDSAEVLVLAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEFHPFGEFLASGS 119
Query: 448 FGPSIKIWDLESKEMVEELRPEIINQTQTSKTDPPQCLSLAWSTDGQTLFAGYSDNTIRV 627
++KIWD+ K + QT K ++ ++ DG+ + +G DN ++V
Sbjct: 120 SDANLKIWDIRKKGCI-----------QTYKGHSRGISTIRFTPDGRWVVSGGLDNVVKV 168
Query: 628 WQVS 639
W ++
Sbjct: 169 WDLT 172
>At4g02730.1 68417.m00372 transducin family protein / WD-40 repeat
family protein similar to C. elegans putative WD-repeat
protein C14B1.4 (SP:Q17963)
Length = 333
Score = 89.0 bits (211), Expect = 3e-18
Identities = 59/217 (27%), Positives = 112/217 (51%), Gaps = 6/217 (2%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA--ECKYTIQDDGHSDWVSCVRFSPNHA 177
H+ + +A+S D+ S S D T+++W+ + EC ++ GH+++V CV F+P
Sbjct: 84 HSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLR--GHTNFVFCVNFNP--P 139
Query: 178 NPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 357
+ +IVS +D T+++W + K HS +++V + DGSL S D +WD
Sbjct: 140 SNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDA 199
Query: 358 NDGKHLHTL--DHNDIITALCFSPN-RYWLCAAFGPSIKIWDLESKEMVEELRPEIINQT 528
+G L TL D + ++ FSPN ++ L A ++K+ + + + + +
Sbjct: 200 KEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFL---------KV 250
Query: 529 QTSKTDPPQCLSLAWS-TDGQTLFAGYSDNTIRVWQV 636
T T+ C++ A+S T+G+ + +G DN + +W +
Sbjct: 251 YTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDL 287
Score = 58.4 bits (135), Expect = 5e-09
Identities = 51/207 (24%), Positives = 92/207 (44%), Gaps = 5/207 (2%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 183
HT + V FS D + S S DKT+ LW+ + +GHS +S + +S + +
Sbjct: 42 HTAAISCVKFSNDGNLLASASVDKTMILWSA-TNYSLIHRYEGHSSGISDLAWSSD--SH 98
Query: 184 IIVSCGWDRTVKVWHLTN---CKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 354
S D T+++W + C LK+ GH+ ++ V +P +L SG D +W+
Sbjct: 99 YTCSASDDCTLRIWDARSPYEC-LKVLR-GHTNFVFCVNFNPPSNLIVSGSFDETIRIWE 156
Query: 355 LNDGKHLHTLD-HNDIITALCFS-PNRYWLCAAFGPSIKIWDLESKEMVEELRPEIINQT 528
+ GK + + H+ I+++ F+ + A+ S KIWD + ++ L +
Sbjct: 157 VKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAV 216
Query: 529 QTSKTDPPQCLSLAWSTDGQTLFAGYS 609
+K P L + D + Y+
Sbjct: 217 SFAKFSPNGKFILVATLDSTLKLSNYA 243
Score = 57.6 bits (133), Expect = 8e-09
Identities = 35/130 (26%), Positives = 66/130 (50%), Gaps = 3/130 (2%)
Frame = +1
Query: 127 DGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDG 306
+GH+ +SCV+FS N N ++ S D+T+ +W TN L + GHS ++ + S D
Sbjct: 40 EGHTAAISCVKFS-NDGN-LLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSDS 97
Query: 307 SLCASGGKDMKAMLWDLNDG-KHLHTL-DHNDIITALCFS-PNRYWLCAAFGPSIKIWDL 477
S D +WD + L L H + + + F+ P+ + +F +I+IW++
Sbjct: 98 HYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEV 157
Query: 478 ESKEMVEELR 507
++ + V ++
Sbjct: 158 KTGKCVRMIK 167
Score = 37.5 bits (83), Expect = 0.009
Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Frame = +1
Query: 4 HTKDVLSV--AFSVDN-RQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNH 174
HT V + AFSV N + IVSGS D + LW+ A + +GH+D V V P
Sbjct: 254 HTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQAR-NILQRLEGHTDAVISVSCHPVQ 312
Query: 175 ANPIIVSCGWDRTVKVW 225
D+T+++W
Sbjct: 313 NEISSSGNHLDKTIRIW 329
>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
family protein similar to katanin p80 subunit
[Strongylocentrotus purpuratus] GI:3005601; contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 871
Score = 83.8 bits (198), Expect = 1e-16
Identities = 51/166 (30%), Positives = 76/166 (45%), Gaps = 2/166 (1%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 183
H+ + SV F + +G+ TIKLW+ L E K GH V F P
Sbjct: 151 HSSGIDSVTFDASEGLVAAGAASGTIKLWD-LEEAKVVRTLTGHRSNCVSVNFHP--FGE 207
Query: 184 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 363
S D +K+W + + GH+ +N + +PDG SGG+D +WDL
Sbjct: 208 FFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTA 267
Query: 364 GKHLHTL-DHNDIITALCFSPNRYWLC-AAFGPSIKIWDLESKEMV 495
GK LH H I +L F P+ + L + ++K WDLE+ E++
Sbjct: 268 GKLLHEFKSHEGKIQSLDFHPHEFLLATGSADKTVKFWDLETFELI 313
Score = 64.1 bits (149), Expect = 1e-10
Identities = 42/171 (24%), Positives = 78/171 (45%), Gaps = 2/171 (1%)
Frame = +1
Query: 133 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSL 312
HS V+C++ ++ ++V+ G D V +W + ++ GHS +++VT L
Sbjct: 108 HSAAVNCLKIG-RKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGL 166
Query: 313 CASGGKDMKAMLWDLNDGKHLHTL-DHNDIITALCFSP-NRYWLCAAFGPSIKIWDLESK 486
A+G LWDL + K + TL H ++ F P ++ + ++KIWD+ K
Sbjct: 167 VAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKK 226
Query: 487 EMVEELRPEIINQTQTSKTDPPQCLSLAWSTDGQTLFAGYSDNTIRVWQVS 639
+ T K L ++ DG+ + +G DN ++VW ++
Sbjct: 227 GCI-----------HTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLT 266
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 81.8 bits (193), Expect = 4e-16
Identities = 58/206 (28%), Positives = 92/206 (44%), Gaps = 2/206 (0%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 183
H+ + SV F + +G+ TIKLW+ L E K GH +C+ +
Sbjct: 58 HSSGIDSVTFDASEVLVAAGAASGTIKLWD-LEEAKIVRTLTGHRS--NCISVDFHPFGE 114
Query: 184 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 363
S D +K+W + + GH+ +N + +PDG SGG+D +WDL
Sbjct: 115 FFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTA 174
Query: 364 GKHLHTL-DHNDIITALCFSPNRYWLCAAFGP-SIKIWDLESKEMVEELRPEIINQTQTS 537
GK L H I +L F P+ + L ++K WDLE+ E++ PE
Sbjct: 175 GKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFELIGSGGPE-------- 226
Query: 538 KTDPPQCLSLAWSTDGQTLFAGYSDN 615
T +CLS ++ DG+T+ G ++
Sbjct: 227 -TAGVRCLS--FNPDGKTVLCGLQES 249
Score = 67.7 bits (158), Expect = 8e-12
Identities = 47/161 (29%), Positives = 74/161 (45%), Gaps = 2/161 (1%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE-CKYTIQDDGHSDWVSCVRFSPNHAN 180
H + +SV F SGS D +K+W+ + C +T + GH+ V+ +RF+P+
Sbjct: 100 HRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYK--GHTRGVNVLRFTPD--G 155
Query: 181 PIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLN 360
+VS G D VKVW LT KL H G + ++ P L A+G D WDL
Sbjct: 156 RWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLE 215
Query: 361 DGKHLHTLDHNDI-ITALCFSPNRYWLCAAFGPSIKIWDLE 480
+ + + + L F+P+ + S+KI+ E
Sbjct: 216 TFELIGSGGPETAGVRCLSFNPDGKTVLCGLQESLKIFSWE 256
Score = 62.5 bits (145), Expect = 3e-10
Identities = 44/179 (24%), Positives = 82/179 (45%), Gaps = 3/179 (1%)
Frame = +1
Query: 112 YTIQDD-GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTV 288
Y +Q+ HS V+C++ ++ ++V+ G D V +W + ++ GHS +++V
Sbjct: 7 YKLQEFVAHSAAVNCLKIG-RKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSV 65
Query: 289 TVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL-DHNDIITALCFSP-NRYWLCAAFGPSI 462
T L A+G LWDL + K + TL H ++ F P ++ + ++
Sbjct: 66 TFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNL 125
Query: 463 KIWDLESKEMVEELRPEIINQTQTSKTDPPQCLSLAWSTDGQTLFAGYSDNTIRVWQVS 639
KIWD+ K + T K L ++ DG+ + +G DN ++VW ++
Sbjct: 126 KIWDIRKKGCI-----------HTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLT 173
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 81.8 bits (193), Expect = 4e-16
Identities = 58/206 (28%), Positives = 92/206 (44%), Gaps = 2/206 (0%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 183
H+ + SV F + +G+ TIKLW+ L E K GH +C+ +
Sbjct: 58 HSSGIDSVTFDASEVLVAAGAASGTIKLWD-LEEAKIVRTLTGHRS--NCISVDFHPFGE 114
Query: 184 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 363
S D +K+W + + GH+ +N + +PDG SGG+D +WDL
Sbjct: 115 FFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTA 174
Query: 364 GKHLHTL-DHNDIITALCFSPNRYWLCAAFGP-SIKIWDLESKEMVEELRPEIINQTQTS 537
GK L H I +L F P+ + L ++K WDLE+ E++ PE
Sbjct: 175 GKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFELIGSGGPE-------- 226
Query: 538 KTDPPQCLSLAWSTDGQTLFAGYSDN 615
T +CLS ++ DG+T+ G ++
Sbjct: 227 -TAGVRCLS--FNPDGKTVLCGLQES 249
Score = 67.7 bits (158), Expect = 8e-12
Identities = 47/161 (29%), Positives = 74/161 (45%), Gaps = 2/161 (1%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE-CKYTIQDDGHSDWVSCVRFSPNHAN 180
H + +SV F SGS D +K+W+ + C +T + GH+ V+ +RF+P+
Sbjct: 100 HRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYK--GHTRGVNVLRFTPD--G 155
Query: 181 PIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLN 360
+VS G D VKVW LT KL H G + ++ P L A+G D WDL
Sbjct: 156 RWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLE 215
Query: 361 DGKHLHTLDHNDI-ITALCFSPNRYWLCAAFGPSIKIWDLE 480
+ + + + L F+P+ + S+KI+ E
Sbjct: 216 TFELIGSGGPETAGVRCLSFNPDGKTVLCGLQESLKIFSWE 256
Score = 62.5 bits (145), Expect = 3e-10
Identities = 44/179 (24%), Positives = 82/179 (45%), Gaps = 3/179 (1%)
Frame = +1
Query: 112 YTIQDD-GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTV 288
Y +Q+ HS V+C++ ++ ++V+ G D V +W + ++ GHS +++V
Sbjct: 7 YKLQEFVAHSAAVNCLKIG-RKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSV 65
Query: 289 TVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL-DHNDIITALCFSP-NRYWLCAAFGPSI 462
T L A+G LWDL + K + TL H ++ F P ++ + ++
Sbjct: 66 TFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNL 125
Query: 463 KIWDLESKEMVEELRPEIINQTQTSKTDPPQCLSLAWSTDGQTLFAGYSDNTIRVWQVS 639
KIWD+ K + T K L ++ DG+ + +G DN ++VW ++
Sbjct: 126 KIWDIRKKGCI-----------HTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLT 173
>At2g43770.1 68415.m05441 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to U5 snRNP-specific 40 kDa protein (GI:3820594)
[Homo sapiens]
Length = 343
Score = 77.4 bits (182), Expect = 1e-14
Identities = 59/215 (27%), Positives = 94/215 (43%), Gaps = 3/215 (1%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWV-SCVRFSPNHAN 180
H +L + ++ D QIVS S DKT++ W+ + K + HS +V SC
Sbjct: 95 HKNAILDLHWTSDGSQIVSASPDKTVRAWD-VETGKQIKKMAEHSSFVNSCC--PTRRGP 151
Query: 181 PIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLN 360
P+I+S D T K+W + + I + V+ S +GG D +WDL
Sbjct: 152 PLIISGSDDGTAKLWDMRQ-RGAIQTFPDKYQITAVSFSDAADKIFTGGVDNDVKVWDLR 210
Query: 361 DGKHLHTLD-HNDIITALCFSPN-RYWLCAAFGPSIKIWDLESKEMVEELRPEIINQTQT 534
G+ TL+ H D IT + SP+ Y L + +WD+ + + R I +
Sbjct: 211 KGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDM--RPYAPQNRCVKIFEGHQ 268
Query: 535 SKTDPPQCLSLAWSTDGQTLFAGYSDNTIRVWQVS 639
+ L +WS DG + AG SD + +W +
Sbjct: 269 HNFEK-NLLKCSWSPDGTKVTAGSSDRMVHIWDTT 302
Score = 69.7 bits (163), Expect = 2e-12
Identities = 56/213 (26%), Positives = 87/213 (40%), Gaps = 2/213 (0%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 183
H V ++ F+ I SGS D+ I LW +CK + GH + + + ++ + +
Sbjct: 52 HPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDGSQ- 110
Query: 184 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDG-SLCASGGKDMKAMLWDLN 360
IVS D+TV+ W + K HS ++N+ + G L SG D A LWD+
Sbjct: 111 -IVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMR 169
Query: 361 DGKHLHTLDHNDIITALCFSPNRYWL-CAAFGPSIKIWDLESKEMVEELRPEIINQTQTS 537
+ T ITA+ FS + +K+WDL E T T
Sbjct: 170 QRGAIQTFPDKYQITAVSFSDAADKIFTGGVDNDVKVWDLRKGE-----------ATMTL 218
Query: 538 KTDPPQCLSLAWSTDGQTLFAGYSDNTIRVWQV 636
+ ++ S DG L DN + VW +
Sbjct: 219 EGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDM 251
Score = 44.8 bits (101), Expect = 6e-05
Identities = 34/145 (23%), Positives = 65/145 (44%), Gaps = 9/145 (6%)
Frame = +1
Query: 16 VLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVS 195
+ +V+FS +I +G D +K+W+ L + + T+ +GH D ++ + SP+ + +++
Sbjct: 183 ITAVSFSDAADKIFTGGVDNDVKVWD-LRKGEATMTLEGHQDTITGMSLSPDGS--YLLT 239
Query: 196 CGWDRTVKVWHL------TNCKLKINHLGHSGYLNTVTVS--PDGSLCASGGKDMKAMLW 351
G D + VW + C H+ N + S PDG+ +G D +W
Sbjct: 240 NGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIW 299
Query: 352 DLNDGKHLHTL-DHNDIITALCFSP 423
D + ++ L H + F P
Sbjct: 300 DTTSRRTIYKLPGHTGSVNECVFHP 324
Score = 41.5 bits (93), Expect = 6e-04
Identities = 30/113 (26%), Positives = 57/113 (50%), Gaps = 5/113 (4%)
Frame = +1
Query: 262 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLN-DGKHLHTL-DHNDIITALCF-SPNRY 432
GH + T+ +P G+L ASG D + LW ++ D K+ L H + I L + S
Sbjct: 51 GHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDGSQ 110
Query: 433 WLCAAFGPSIKIWDLESKEMVEEL--RPEIINQTQTSKTDPPQCLSLAWSTDG 585
+ A+ +++ WD+E+ + ++++ +N ++ PP L ++ S DG
Sbjct: 111 IVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPP--LIISGSDDG 161
Score = 29.1 bits (62), Expect = 3.3
Identities = 21/123 (17%), Positives = 46/123 (37%), Gaps = 5/123 (4%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA-----ECKYTIQDDGHSDWVSCVRFSP 168
H + ++ S D +++ D + +W+ C + H+ + ++ S
Sbjct: 221 HQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSW 280
Query: 169 NHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAML 348
+ + + DR V +W T+ + GH+G +N P + S D L
Sbjct: 281 SPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHPTEPIIGSCSSDKNIYL 340
Query: 349 WDL 357
++
Sbjct: 341 GEI 343
>At2g41500.1 68415.m05127 WD-40 repeat family protein / small
nuclear ribonucleoprotein Prp4p-related similar to U4/U6
small nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo
sapiens}; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies)|19877698|gb|AU238529.1|AU238529
Length = 554
Score = 77.0 bits (181), Expect = 1e-14
Identities = 56/193 (29%), Positives = 92/193 (47%), Gaps = 3/193 (1%)
Frame = +1
Query: 1 DHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHAN 180
DH + V FS + + + S D+T KLW T T +GH D ++ V F P +
Sbjct: 296 DHKERATDVVFSPVDDCLATASADRTAKLWKTDGTLLQTF--EGHLDRLARVAFHP--SG 351
Query: 181 PIIVSCGWDRTVKVWHL-TNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 357
+ + +D+T ++W + T +L + GHS + + DG+L AS G D A +WDL
Sbjct: 352 KYLGTTSYDKTWRLWDINTGAELLLQE-GHSRSVYGIAFQQDGALAASCGLDSLARVWDL 410
Query: 358 NDGKHLHTLD-HNDIITALCFSPNRYWLCAAFGPS-IKIWDLESKEMVEELRPEIINQTQ 531
G+ + H + ++ FSPN Y L + + +IWDL ++ + + P N
Sbjct: 411 RTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSL-YIIPAHANLVS 469
Query: 532 TSKTDPPQCLSLA 570
K +P + LA
Sbjct: 470 QVKYEPQEGYFLA 482
Score = 75.4 bits (177), Expect = 4e-14
Identities = 49/170 (28%), Positives = 84/170 (49%), Gaps = 3/170 (1%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 183
H + VAF + + + S DKT +LW+ + +Q+ GHS V + F + A
Sbjct: 338 HLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQE-GHSRSVYGIAFQQDGA-- 394
Query: 184 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 363
+ SCG D +VW L + + GH + +V SP+G ASGG+D + +WDL
Sbjct: 395 LAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRM 454
Query: 364 GKHLHTLD-HNDIITALCFSPNR-YWLC-AAFGPSIKIWDLESKEMVEEL 504
K L+ + H ++++ + + P Y+L A++ + IW +V+ L
Sbjct: 455 RKSLYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWSGRDFSLVKSL 504
Score = 50.8 bits (116), Expect = 9e-07
Identities = 30/117 (25%), Positives = 53/117 (45%), Gaps = 1/117 (0%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT-LAECKYTIQDDGHSDWVSCVRFSPNHAN 180
H K V SV FS + + SG D ++W+ + + Y I H++ VS V++ P
Sbjct: 422 HIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYIIP--AHANLVSQVKYEPQEGY 479
Query: 181 PIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 351
+ + +D V +W + L + GH + ++ ++ D S A+ D LW
Sbjct: 480 -FLATASYDMKVNIWSGRDFSLVKSLAGHESKVASLDITADSSCIATVSHDRTIKLW 535
Score = 50.0 bits (114), Expect = 2e-06
Identities = 48/205 (23%), Positives = 79/205 (38%), Gaps = 2/205 (0%)
Frame = +1
Query: 28 AFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWD 207
+FS D + + + S KLW H + + V FSP + + + D
Sbjct: 262 SFSRDGKILATCSLSGVTKLWEMPQVTNTIAVLKDHKERATDVVFSP--VDDCLATASAD 319
Query: 208 RTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD 387
RT K+W T+ L GH L V P G + D LWD+N G L +
Sbjct: 320 RTAKLWK-TDGTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQE 378
Query: 388 -HNDIITALCFSPNRYWLCAAFGPSI-KIWDLESKEMVEELRPEIINQTQTSKTDPPQCL 561
H+ + + F + + S+ ++WDL + + + I
Sbjct: 379 GHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHI-----------KPVF 427
Query: 562 SLAWSTDGQTLFAGYSDNTIRVWQV 636
S+ +S +G L +G DN R+W +
Sbjct: 428 SVNFSPNGYHLASGGEDNQCRIWDL 452
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 96
H V S+ + D+ I + S D+TIKLW +
Sbjct: 507 HESKVASLDITADSSCIATVSHDRTIKLWTS 537
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 74.1 bits (174), Expect = 9e-14
Identities = 49/186 (26%), Positives = 92/186 (49%), Gaps = 4/186 (2%)
Frame = +1
Query: 91 NTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHS 270
+T + K TI+ G SD ++ + SP+ + ++ S G R ++VW L K + GH
Sbjct: 47 STDSSVKSTIE--GESDTLTALALSPD--DKLLFSAGHSRQIRVWDLETLKCIRSWKGHE 102
Query: 271 GYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL-DHNDIITALCFSPN---RYWL 438
G + + G L A+ G D K ++WD++ G H H +++++ F P+ +
Sbjct: 103 GPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPDSNKNILI 162
Query: 439 CAAFGPSIKIWDLESKEMVEELRPEIINQTQTSKTDPPQCLSLAWSTDGQTLFAGYSDNT 618
+ ++++WDL +K E+ I+ + ++ T S+A S DG TLF+ D
Sbjct: 163 SGSDDATVRVWDLNAKN-TEKKCLAIMEKHFSAVT------SIALSEDGLTLFSAGRDKV 215
Query: 619 IRVWQV 636
+ +W +
Sbjct: 216 VNLWDL 221
Score = 70.1 bits (164), Expect = 1e-12
Identities = 65/239 (27%), Positives = 107/239 (44%), Gaps = 23/239 (9%)
Frame = +1
Query: 4 HTKDVLSVAFSVD---NRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNH 174
H + VLS+ V N IV+GS+DKT++LWN ++ + GH+ + V F+
Sbjct: 400 HKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNATSKSCIGV-GTGHNGDILAVAFAKKS 458
Query: 175 ANPIIVSCGWDRTVKVWHL----------TNCKLKINHLGHSGYLNTVTVSPDGSLCASG 324
+ VS DRT+KVW L N K + H +N+V V+ + SL +G
Sbjct: 459 FS-FFVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHDKDINSVAVARNDSLVCTG 517
Query: 325 GKDMKAMLWDLNDGKHLHTL-DHNDIITALCFSPNRYWLCAAFG-PSIKIWDLESKEMVE 498
+D A +W L D H+ TL H I ++ FS + A G ++KIW + ++
Sbjct: 518 SEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLK 577
Query: 499 ELRPEIINQTQTS-KTDPPQCLSLA-------WSTDGQTLFAGYSDNTIRVWQVSISAR 651
+ + S TD Q +S W+ + A Y + +VW +++ +
Sbjct: 578 TFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTSECIATYDQHEDKVWALAVGKK 636
Score = 68.5 bits (160), Expect = 4e-12
Identities = 44/173 (25%), Positives = 81/173 (46%), Gaps = 3/173 (1%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 183
H KD+ SVA + ++ + +GS D+T +W L + + + GH + V FS +
Sbjct: 498 HDKDINSVAVARNDSLVCTGSEDRTASIWR-LPDLVHVVTLKGHKRRIFSVEFST--VDQ 554
Query: 184 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 363
+++ D+TVK+W +++ GH+ + + DG+ S G D LW++N
Sbjct: 555 CVMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNT 614
Query: 364 GKHLHTLD-HNDIITALCFSPNRYWLCAAFGPS-IKIW-DLESKEMVEELRPE 513
+ + T D H D + AL + G + I +W D + + ++ R E
Sbjct: 615 SECIATYDQHEDKVWALAVGKKTEMIATGGGDAVINLWHDSTASDKEDDFRKE 667
Score = 51.6 bits (118), Expect = 5e-07
Identities = 36/141 (25%), Positives = 64/141 (45%), Gaps = 5/141 (3%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE-CKYTIQDDGHSDWVSCVRFSPNHAN 180
H V+ +A + + D+ + +W+ C + + GH VS + F P+
Sbjct: 101 HEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFR--GHKGVVSSILFHPDSNK 158
Query: 181 PIIVSCGWDRTVKVWHLT--NCKLKINHL--GHSGYLNTVTVSPDGSLCASGGKDMKAML 348
I++S D TV+VW L N + K + H + ++ +S DG S G+D L
Sbjct: 159 NILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKVVNL 218
Query: 349 WDLNDGKHLHTLDHNDIITAL 411
WDL+D T+ +++ A+
Sbjct: 219 WDLHDYSCKATVATYEVLEAV 239
Score = 35.9 bits (79), Expect = 0.029
Identities = 30/152 (19%), Positives = 58/152 (38%), Gaps = 2/152 (1%)
Frame = +1
Query: 190 VSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGK 369
++C + + T+ +K G S L + +SPD L S G + +WDL K
Sbjct: 34 IACACGDVINIVDSTDSSVKSTIEGESDTLTALALSPDDKLLFSAGHSRQIRVWDLETLK 93
Query: 370 HLHTLDHND--IITALCFSPNRYWLCAAFGPSIKIWDLESKEMVEELRPEIINQTQTSKT 543
+ + ++ ++ C + A + +WD++ R +S
Sbjct: 94 CIRSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGH--KGVVSSIL 151
Query: 544 DPPQCLSLAWSTDGQTLFAGYSDNTIRVWQVS 639
P ++ L +G D T+RVW ++
Sbjct: 152 FHPD-------SNKNILISGSDDATVRVWDLN 176
>At2g33340.2 68415.m04087 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 537
Score = 73.3 bits (172), Expect = 2e-13
Identities = 47/165 (28%), Positives = 76/165 (46%), Gaps = 7/165 (4%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE----CKYTIQDDGHSDWVSCVRFSPN 171
H+K V SV F D+ +++ S DKT+++W + C YT+ D HS V V P
Sbjct: 263 HSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLND--HSAEVRAVTVHP- 319
Query: 172 HANPIIVSCGWDRTVKVWHLT--NCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAM 345
N VS D T + L+ +C +++ + PDG + +G
Sbjct: 320 -TNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHPDGLILGTGTSQSVVK 378
Query: 346 LWDLNDGKHLHTLD-HNDIITALCFSPNRYWLCAAFGPSIKIWDL 477
+WD+ ++ D H +TA+ FS N Y+L A +++WDL
Sbjct: 379 IWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAEDGVRLWDL 423
Score = 44.8 bits (101), Expect = 6e-05
Identities = 38/164 (23%), Positives = 72/164 (43%), Gaps = 5/164 (3%)
Frame = +1
Query: 172 HANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 351
H+ +I + G D T ++ + ++ GHS + +V D L + D +W
Sbjct: 232 HSKDVIATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIW 291
Query: 352 -DLNDGKHL--HTL-DHNDIITALCFSP-NRYWLCAAFGPSIKIWDLESKEMVEELRPEI 516
+ DG + +TL DH+ + A+ P N+Y++ A+ + +DL S + ++ +
Sbjct: 292 RNPGDGNYACGYTLNDHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDS 351
Query: 517 INQTQTSKTDPPQCLSLAWSTDGQTLFAGYSDNTIRVWQVSISA 648
N T + A+ DG L G S + +++W V A
Sbjct: 352 KNVDYT---------AAAFHPDGLILGTGTSQSVVKIWDVKSQA 386
>At2g33340.1 68415.m04086 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 565
Score = 73.3 bits (172), Expect = 2e-13
Identities = 47/165 (28%), Positives = 76/165 (46%), Gaps = 7/165 (4%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE----CKYTIQDDGHSDWVSCVRFSPN 171
H+K V SV F D+ +++ S DKT+++W + C YT+ D HS V V P
Sbjct: 263 HSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLND--HSAEVRAVTVHP- 319
Query: 172 HANPIIVSCGWDRTVKVWHLT--NCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAM 345
N VS D T + L+ +C +++ + PDG + +G
Sbjct: 320 -TNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHPDGLILGTGTSQSVVK 378
Query: 346 LWDLNDGKHLHTLD-HNDIITALCFSPNRYWLCAAFGPSIKIWDL 477
+WD+ ++ D H +TA+ FS N Y+L A +++WDL
Sbjct: 379 IWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAEDGVRLWDL 423
Score = 44.8 bits (101), Expect = 6e-05
Identities = 38/164 (23%), Positives = 72/164 (43%), Gaps = 5/164 (3%)
Frame = +1
Query: 172 HANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 351
H+ +I + G D T ++ + ++ GHS + +V D L + D +W
Sbjct: 232 HSKDVIATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIW 291
Query: 352 -DLNDGKHL--HTL-DHNDIITALCFSP-NRYWLCAAFGPSIKIWDLESKEMVEELRPEI 516
+ DG + +TL DH+ + A+ P N+Y++ A+ + +DL S + ++ +
Sbjct: 292 RNPGDGNYACGYTLNDHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDS 351
Query: 517 INQTQTSKTDPPQCLSLAWSTDGQTLFAGYSDNTIRVWQVSISA 648
N T + A+ DG L G S + +++W V A
Sbjct: 352 KNVDYT---------AAAFHPDGLILGTGTSQSVVKIWDVKSQA 386
>At2g47410.1 68415.m05917 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to WDR protein, form B (GI:14970593) [Mus
musculus]
Length = 1589
Score = 72.9 bits (171), Expect = 2e-13
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 9/179 (5%)
Frame = +1
Query: 130 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 309
GH + V C F + + +++ DR VK+W + + GH G + + VS + +
Sbjct: 303 GHRNAVYCAIF--DRSGRYVITGSDDRLVKIWSMETALCLASCRGHEGDITDLAVSSNNA 360
Query: 310 LCASGGKDMKAMLWDLNDGKHLHTL-DHNDIITALCFSPNR---YWLCAAFGP-SIKIWD 474
L AS D +W L DG + L H +TA+ FSP + Y L ++ + +IWD
Sbjct: 361 LVASASNDFVIRVWRLPDGMPISVLRGHTGAVTAIAFSPRQASVYQLLSSSDDGTCRIWD 420
Query: 475 LESKEMVEEL---RPEIINQTQTSK-TDPPQCLSLAWSTDGQTLFAGYSDNTIRVWQVS 639
+ + + P N TS + Q L A++ +G G SD+ RVW S
Sbjct: 421 ARYSQWLPRIYVPSPSDANTGSTSNASQSHQILCCAYNANGTIFVTGSSDSNARVWSAS 479
Score = 29.1 bits (62), Expect = 3.3
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Frame = +1
Query: 10 KDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP-I 186
+ V + +S+DNR +++ D I +WN A+ GHS+ S + NP I
Sbjct: 598 RGVNMIIWSLDNRFVLAAIMDCRICVWNA-ADGSLVHCLTGHSE--SSYVLDVHPFNPRI 654
Query: 187 IVSCGWDRTVKVWHL-TNCKLKINHLG 264
+S G+D +W + +K+ +G
Sbjct: 655 AMSAGYDGKTIIWDIWEGIPIKVYEIG 681
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 68.9 bits (161), Expect = 3e-12
Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 2/160 (1%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC-KYTIQDDGHSDWVSCVRFSPNHAN 180
H V SVAF N +GS D+TIK+W+ K T+ GH V + S H
Sbjct: 169 HLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLT--GHIGQVRGLAVSNRHT- 225
Query: 181 PIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLN 360
+ S G D+ VK W L K+ ++ GH + + + P + +GG+D +WD+
Sbjct: 226 -YMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDVVLTGGRDSVCRVWDIR 284
Query: 361 DGKHLHTLDH-NDIITALCFSPNRYWLCAAFGPSIKIWDL 477
+ L H +D+ + L + + + +IK WDL
Sbjct: 285 TKMQIFVLPHDSDVFSVLARPTDPQVITGSHDSTIKFWDL 324
Score = 57.6 bits (133), Expect = 8e-09
Identities = 47/171 (27%), Positives = 71/171 (41%), Gaps = 2/171 (1%)
Frame = +1
Query: 130 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 309
GH WV V F P+ N + DRT+K+W + LK+ GH G + + VS +
Sbjct: 168 GHLGWVRSVAFDPS--NEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRHT 225
Query: 310 LCASGGKDMKAMLWDLNDGKHLHTL-DHNDIITALCFSPNRYWLCAAFGPSI-KIWDLES 483
S G D + WDL K + + H + L P + S+ ++WD+ +
Sbjct: 226 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDVVLTGGRDSVCRVWDIRT 285
Query: 484 KEMVEELRPEIINQTQTSKTDPPQCLSLAWSTDGQTLFAGYSDNTIRVWQV 636
K + L P D LA TD Q + G D+TI+ W +
Sbjct: 286 KMQIFVL-PH----------DSDVFSVLARPTDPQVI-TGSHDSTIKFWDL 324
Score = 39.1 bits (87), Expect = 0.003
Identities = 42/212 (19%), Positives = 80/212 (37%), Gaps = 2/212 (0%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 183
H V +A +++G RD ++W+ + + + H V V P +P
Sbjct: 253 HLHGVYCLALHPTLDVVLTGGRDSVCRVWDIRTKMQIFVLP--HDSDVFSVLARPT--DP 308
Query: 184 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 363
+++ D T+K W L K H + + + P + S D + L
Sbjct: 309 QVITGSHDSTIKFWDLRYGKSMATITNHKKTVRAMALHPKENDFVSASAD-NIKKFSLPK 367
Query: 364 GKHLHTL--DHNDIITALCFSPNRYWLCAAFGPSIKIWDLESKEMVEELRPEIINQTQTS 537
G+ H + DII A+ + + + + WD +S + R E I Q +
Sbjct: 368 GEFCHNMLSLQRDIINAVAVNEDGVMVTGGDKGGLWFWDWKSGHNFQ--RAETIVQPGSL 425
Query: 538 KTDPPQCLSLAWSTDGQTLFAGYSDNTIRVWQ 633
+++ + + G L D TI++W+
Sbjct: 426 ESE-AGIYAACYDQTGSRLVTCEGDKTIKMWK 456
>At5g50230.1 68418.m06221 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to TIPD PROTEIN (SP:O15736)[Dictyostelium
discoideum]
Length = 515
Score = 66.5 bits (155), Expect = 2e-11
Identities = 53/215 (24%), Positives = 102/215 (47%), Gaps = 6/215 (2%)
Frame = +1
Query: 13 DVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDDGHSDWVSCV---RFSPNHAN 180
++L +A + DN+ +++ + + +W+ + ++T+ GH+D V V +FS H
Sbjct: 275 NILDMAVTHDNKSVIAATSSNNLFVWDVSSGRVRHTL--TGHTDKVCAVDVSKFSSRH-- 330
Query: 181 PIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLN 360
+VS +DRT+K+W L + N + + N + +S DG SG D LWD+
Sbjct: 331 --VVSAAYDRTIKLWDL-HKGYCTNTVLFTSNCNAICLSIDGLTVFSGHMDGNLRLWDIQ 387
Query: 361 DGKHL-HTLDHNDIITALCFSPNRYWLCAAFGPSI-KIWDLESKEMVEELRPEIINQTQT 534
GK L H+ +T++ S N + + ++ ++D + E+ LR + +
Sbjct: 388 TGKLLSEVAGHSSAVTSVSLSRNGNRILTSGRDNVHNVFDTRTLEICGTLR---ASGNRL 444
Query: 535 SKTDPPQCLSLAWSTDGQTLFAGYSDNTIRVWQVS 639
+ C+ S D + AG +D ++ VW +S
Sbjct: 445 ASNWSRSCI----SPDDDYVAAGSADGSVHVWSLS 475
Score = 59.3 bits (137), Expect = 3e-09
Identities = 41/149 (27%), Positives = 69/149 (46%), Gaps = 3/149 (2%)
Frame = +1
Query: 199 GWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLH 378
G DR VK+W + L + G G + + V+ D + +WD++ G+ H
Sbjct: 250 GQDRAVKMWDTNSGTLIKSLYGSLGNILDMAVTHDNKSVIAATSSNNLFVWDVSSGRVRH 309
Query: 379 TL-DHNDIITALCFS--PNRYWLCAAFGPSIKIWDLESKEMVEELRPEIINQTQTSKTDP 549
TL H D + A+ S +R+ + AA+ +IK+WDL + TS
Sbjct: 310 TLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDLHKGYCTNTV-------LFTS---- 358
Query: 550 PQCLSLAWSTDGQTLFAGYSDNTIRVWQV 636
C ++ S DG T+F+G+ D +R+W +
Sbjct: 359 -NCNAICLSIDGLTVFSGHMDGNLRLWDI 386
Score = 48.4 bits (110), Expect = 5e-06
Identities = 52/217 (23%), Positives = 93/217 (42%), Gaps = 8/217 (3%)
Frame = +1
Query: 4 HTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNT-LAECKYTIQDDGHSDWVSCVRFSPNHA 177
HT V +V S +R +VS + D+TIKLW+ C T+ + + + C+
Sbjct: 314 HTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDLHKGYCTNTVLFTSNCNAI-CLSID---- 368
Query: 178 NPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 357
+ S D +++W + KL GHS + +V++S +G+ + G+D ++D
Sbjct: 369 GLTVFSGHMDGNLRLWDIQTGKLLSEVAGHSSAVTSVSLSRNGNRILTSGRDNVHNVFDT 428
Query: 358 NDGKHLHTL--DHNDII---TALCFSPNRYWLCAAFGP-SIKIWDLESKEMVEELRPEII 519
+ TL N + + C SP+ ++ A S+ +W L +V L+
Sbjct: 429 RTLEICGTLRASGNRLASNWSRSCISPDDDYVAAGSADGSVHVWSLSKGNIVSILK---- 484
Query: 520 NQTQTSKTDPPQCLSLAWSTDGQTLFAGYSDNTIRVW 630
+T P C S WS G+ L + + + W
Sbjct: 485 -----EQTSPILCCS--WSGIGKPLASADKNGYVCTW 514
Score = 37.9 bits (84), Expect = 0.007
Identities = 31/148 (20%), Positives = 60/148 (40%), Gaps = 2/148 (1%)
Frame = +1
Query: 199 GWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLH 378
G D V+ + C +I+ H G ++ + +GG+D +WD N G +
Sbjct: 210 GTDHFVESTIPSTCANRIH--AHEGGCGSIVFEYNSGTLFTGGQDRAVKMWDTNSGTLIK 267
Query: 379 TL--DHNDIITALCFSPNRYWLCAAFGPSIKIWDLESKEMVEELRPEIINQTQTSKTDPP 552
+L +I+ N+ + A ++ +WD+ S + T T TD
Sbjct: 268 SLYGSLGNILDMAVTHDNKSVIAATSSNNLFVWDVSSGR---------VRHTLTGHTDKV 318
Query: 553 QCLSLAWSTDGQTLFAGYSDNTIRVWQV 636
+ ++ + + A Y D TI++W +
Sbjct: 319 CAVDVSKFSSRHVVSAAY-DRTIKLWDL 345
>At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless
protein, putative similar to notchless [Xenopus laevis]
GI:3687833; contains Pfam PF00400: WD domain, G-beta
repeat (8 copies)
Length = 473
Score = 66.1 bits (154), Expect = 2e-11
Identities = 42/116 (36%), Positives = 61/116 (52%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 183
H + V V FS D + I S S DK+++LWN + T+ GH V V +S + +
Sbjct: 359 HQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFR-GHVGPVYQVSWSAD--SR 415
Query: 184 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 351
+++S D T+K+W + KLK + GH+ + V SPDG SGGKD LW
Sbjct: 416 LLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKVVSGGKDRVLKLW 471
Score = 64.9 bits (151), Expect = 5e-11
Identities = 48/176 (27%), Positives = 87/176 (49%), Gaps = 8/176 (4%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK-YTIQDDGHSDWVSCVRFSPNHAN 180
H + VL V+FS D +Q+ SGS D T++LW+ E +T + GH +WV V +SP+ +
Sbjct: 108 HAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCK--GHKNWVLTVAWSPDGKH 165
Query: 181 PIIVSCGWDRTVKVWHLTNCKLKINHL-GHSGYLNTVTVSPD--GSLC---ASGGKDMKA 342
+VS + W+ +L+ + L GH ++ ++ P S C + KD A
Sbjct: 166 --LVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVTSSKDGDA 223
Query: 343 MLWDLNDGKHLHTLD-HNDIITALCFSPNRYWLCAAFGPSIKIWDLESKEMVEELR 507
+WD+ K + L H +T + + + + +IK+W+ +++ EL+
Sbjct: 224 RIWDITLKKSIICLSGHTLAVTCVKWGGDGIIYTGSQDCTIKMWETTQGKLIRELK 279
Score = 63.3 bits (147), Expect = 2e-10
Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 3/214 (1%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 183
HT V V + D I +GS+D TIK+W T + K + GH W++ + S +
Sbjct: 240 HTLAVTCVKWGGDGI-IYTGSQDCTIKMWET-TQGKLIRELKGHGHWINSLALSTEY--- 294
Query: 184 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 363
++ + +D T + + K K Y T SP+ + SG D LW+ +
Sbjct: 295 VLRTGAFDHTGRQYPPNEEKQK----ALERYNKTKGDSPERLV--SGSDDFTMFLWEPSV 348
Query: 364 GKH--LHTLDHNDIITALCFSPNRYWLCAA-FGPSIKIWDLESKEMVEELRPEIINQTQT 534
K H ++ + FSP+ W+ +A F S+++W+ + + V R + Q
Sbjct: 349 SKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQV 408
Query: 535 SKTDPPQCLSLAWSTDGQTLFAGYSDNTIRVWQV 636
S WS D + L +G D+T+++W++
Sbjct: 409 S-----------WSADSRLLLSGSKDSTLKIWEI 431
Score = 58.0 bits (134), Expect = 6e-09
Identities = 51/186 (27%), Positives = 80/186 (43%), Gaps = 8/186 (4%)
Frame = +1
Query: 106 CKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNT 285
C TI GH++ V CV FSP+ + S D TV++W L GH ++ T
Sbjct: 101 CSQTIA--GHAEAVLCVSFSPDGKQ--LASGSGDTTVRLWDLYTETPLFTCKGHKNWVLT 156
Query: 286 VTVSPDGSLCASGGKDMKAMLWDLNDG--KHLHTLDHNDIITALCF------SPNRYWLC 441
V SPDG SG K + W+ G + H IT + + SP R ++
Sbjct: 157 VAWSPDGKHLVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVT 216
Query: 442 AAFGPSIKIWDLESKEMVEELRPEIINQTQTSKTDPPQCLSLAWSTDGQTLFAGYSDNTI 621
++ +IWD+ K+ + L + T C+ W DG ++ G D TI
Sbjct: 217 SSKDGDARIWDITLKKSIICLSGHTLAVT---------CVK--WGGDG-IIYTGSQDCTI 264
Query: 622 RVWQVS 639
++W+ +
Sbjct: 265 KMWETT 270
Score = 58.0 bits (134), Expect = 6e-09
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 1/127 (0%)
Frame = +1
Query: 49 QIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWH 228
++VSGS D T+ LW + + GH V+ V FSP+ I S +D++V++W+
Sbjct: 331 RLVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPD--GKWIASASFDKSVRLWN 388
Query: 229 LTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL-DHNDIIT 405
+ GH G + V+ S D L SG KD +W++ K L H D +
Sbjct: 389 GITGQFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVF 448
Query: 406 ALCFSPN 426
A+ +SP+
Sbjct: 449 AVDWSPD 455
Score = 48.8 bits (111), Expect = 4e-06
Identities = 38/152 (25%), Positives = 70/152 (46%), Gaps = 3/152 (1%)
Frame = +1
Query: 187 IVSCGWDRTVKVWHLTNCKLKINHL-GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 363
+VS D T+ +W + K L GH +N V SPDG AS D LW+
Sbjct: 332 LVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGIT 391
Query: 364 GKHLHTL-DHNDIITALCFSPN-RYWLCAAFGPSIKIWDLESKEMVEELRPEIINQTQTS 537
G+ + H + + +S + R L + ++KIW++ +K++ ++L
Sbjct: 392 GQFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDL---------PG 442
Query: 538 KTDPPQCLSLAWSTDGQTLFAGYSDNTIRVWQ 633
D + ++ WS DG+ + +G D +++W+
Sbjct: 443 HAD--EVFAVDWSPDGEKVVSGGKDRVLKLWK 472
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +1
Query: 484 KEMVEELRPEIINQ-TQTSKTDPPQCLSLAWSTDGQTLFAGYSDNTIRVWQV 636
++ V +RP +N+ +QT L +++S DG+ L +G D T+R+W +
Sbjct: 89 QQAVFRIRP--VNRCSQTIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDL 138
>At5g56130.1 68418.m07002 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to beta transducin-like protein HET-E2C*4
(GI:17225206) [Podospora anserina]
Length = 315
Score = 65.7 bits (153), Expect = 3e-11
Identities = 53/216 (24%), Positives = 100/216 (46%), Gaps = 4/216 (1%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQD---DGHSDWVSCVRFSPNH 174
H K V SVA++ + ++ SGS D+T ++WN +D GH+D V + + P H
Sbjct: 19 HKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQLCWDPKH 78
Query: 175 ANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 354
++ + + G D++V++W + K + SG +T PDG+ A G +D + + D
Sbjct: 79 SDLVATASG-DKSVRLWDARSGKC-TQQVELSGENINITYKPDGTHVAVGNRDDELTILD 136
Query: 355 LNDGKHLHTLDHNDIITALCFS-PNRYWLCAAFGPSIKIWDLESKEMVEELRPEIINQTQ 531
+ K LH N + + ++ P ++ ++++ S L+P T
Sbjct: 137 VRKFKPLHRRKFNYEVNEIAWNMPGDFFFLTTGLGTVEVLSYPS------LKP---LDTL 187
Query: 532 TSKTDPPQCLSLAWSTDGQTLFAGYSDNTIRVWQVS 639
T+ T C +A G+ G +D+ + +W +S
Sbjct: 188 TAHT--AGCYCIAIDPKGRYFAVGSADSLVSLWDIS 221
Score = 43.6 bits (98), Expect = 1e-04
Identities = 31/98 (31%), Positives = 48/98 (48%), Gaps = 9/98 (9%)
Frame = +1
Query: 262 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL-----NDGKHLHTLDHNDIITALCFSPN 426
GH +++V + +G+ ASG D A +W++ + K L H D + LC+ P
Sbjct: 18 GHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQLCWDPK 77
Query: 427 RYWLCA-AFG-PSIKIWDLESKEMVE--ELRPEIINQT 528
L A A G S+++WD S + + EL E IN T
Sbjct: 78 HSDLVATASGDKSVRLWDARSGKCTQQVELSGENINIT 115
>At4g29830.1 68417.m04246 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400); G
protein beta subunit-like protein, Schistosoma mansoni,
gb:U30261
Length = 321
Score = 65.7 bits (153), Expect = 3e-11
Identities = 45/140 (32%), Positives = 73/140 (52%), Gaps = 2/140 (1%)
Frame = +1
Query: 10 KDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPII 189
K VLSVA+S + +++ GS D TI +++ + K Q +GH+ V + FSP +P +
Sbjct: 159 KFVLSVAWSPNGKRLACGSMDGTICVFD-VDRSKLLHQLEGHNMPVRSLVFSP--VDPRV 215
Query: 190 VSCGWDRTVKVWHLTNCKLKINHL-GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 366
+ G D H K + + GH+ ++ +V SPDG A+G D LWDL
Sbjct: 216 LFSGSDDGHVNMHDAEGKTLLGSMSGHTSWVLSVDASPDGGAIATGSSDRTVRLWDLKMR 275
Query: 367 KHLHTL-DHNDIITALCFSP 423
+ T+ +HND + ++ F P
Sbjct: 276 AAIQTMSNHNDQVWSVAFRP 295
Score = 59.7 bits (138), Expect = 2e-09
Identities = 50/181 (27%), Positives = 78/181 (43%), Gaps = 7/181 (3%)
Frame = +1
Query: 124 DDGHSDWVSCVRFSP-NHANPIIVSCG-WDRTVKVWHLTNCKLKINHLGHSGYLNTVTVS 297
++ H D V + P P ++ G D TVK+W L + GHS + +
Sbjct: 10 ENAHEDSVWAATWVPATEDRPALLLTGSLDETVKLWRPDELDLVRTNTGHSLGVAALAAH 69
Query: 298 PDGSLCASGGKDMKAMLWDLNDGKHLHTLD-HNDIITALCFSPNRYWLCAAFG--PSIKI 468
P G + AS D ++D++ + L+ + + F P L A G S+K+
Sbjct: 70 PSGIIAASSSIDSFVRVFDVDTNATIAVLEAPPSEVWGMQFEPKGTILAVAGGSSASVKL 129
Query: 469 WDLESKEMVEELR-PEIINQTQTSKTDPPQ-CLSLAWSTDGQTLFAGYSDNTIRVWQVSI 642
WD S ++ L P + KT + LS+AWS +G+ L G D TI V+ V
Sbjct: 130 WDTASWRLISTLSIPRPDAPKPSDKTSSKKFVLSVAWSPNGKRLACGSMDGTICVFDVDR 189
Query: 643 S 645
S
Sbjct: 190 S 190
Score = 43.2 bits (97), Expect = 2e-04
Identities = 36/128 (28%), Positives = 59/128 (46%), Gaps = 3/128 (2%)
Frame = +1
Query: 274 YLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD-HNDIITALCFSP--NRYWLCA 444
++ +V SP+G A G D ++D++ K LH L+ HN + +L FSP R
Sbjct: 160 FVLSVAWSPNGKRLACGSMDGTICVFDVDRSKLLHQLEGHNMPVRSLVFSPVDPRVLFSG 219
Query: 445 AFGPSIKIWDLESKEMVEELRPEIINQTQTSKTDPPQCLSLAWSTDGQTLFAGYSDNTIR 624
+ + + D E K ++ + TS LS+ S DG + G SD T+R
Sbjct: 220 SDDGHVNMHDAEGKTLLGSM------SGHTSWV-----LSVDASPDGGAIATGSSDRTVR 268
Query: 625 VWQVSISA 648
+W + + A
Sbjct: 269 LWDLKMRA 276
Score = 38.3 bits (85), Expect = 0.005
Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQD-DGHSDWVSCVRFSP 168
HT VLSV S D I +GS D+T++LW+ + + IQ H+D V V F P
Sbjct: 242 HTSWVLSVDASPDGGAIATGSSDRTVRLWD--LKMRAAIQTMSNHNDQVWSVAFRP 295
Score = 35.9 bits (79), Expect = 0.029
Identities = 31/113 (27%), Positives = 51/113 (45%), Gaps = 2/113 (1%)
Frame = +1
Query: 52 IVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHL 231
+++GS D+T+KLW E + GHS V+ + P + I S D V+V+ +
Sbjct: 33 LLTGSLDETVKLWRP-DELDLVRTNTGHSLGVAALAAHP--SGIIAASSSIDSFVRVFDV 89
Query: 232 -TNCKLKINHLGHSGYLNTVTVSPDGSLCA-SGGKDMKAMLWDLNDGKHLHTL 384
TN + + S + P G++ A +GG LWD + + TL
Sbjct: 90 DTNATIAVLEAPPSEVWG-MQFEPKGTILAVAGGSSASVKLWDTASWRLISTL 141
>At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic
regulator 1 (PRL1) identical to PP1/PP2A phosphatases
pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis
thaliana], PRL1 [Arabidopsis thaliana] GI:577733;
contains Pfam PF00400: WD domain, G-beta repeat (7
copies)
Length = 486
Score = 65.3 bits (152), Expect = 4e-11
Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 2/160 (1%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 183
H V SVAF N +GS D+TIK+W+ +A + GH + V + S H
Sbjct: 175 HLGWVRSVAFDPSNEWFCTGSADRTIKIWD-VATGVLKLTLTGHIEQVRGLAVSNRHT-- 231
Query: 184 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 363
+ S G D+ VK W L K+ ++ GH + + + P + +GG+D +WD+
Sbjct: 232 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRT 291
Query: 364 GKHLHTLD-HNDIITALCFSP-NRYWLCAAFGPSIKIWDL 477
+ L H++ + ++ P + + + +IK WDL
Sbjct: 292 KMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDL 331
Score = 58.0 bits (134), Expect = 6e-09
Identities = 46/171 (26%), Positives = 68/171 (39%), Gaps = 2/171 (1%)
Frame = +1
Query: 130 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 309
GH WV V F P+ N + DRT+K+W + LK+ GH + + VS +
Sbjct: 174 GHLGWVRSVAFDPS--NEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHT 231
Query: 310 LCASGGKDMKAMLWDLNDGKHLHTL-DHNDIITALCFSPNRYWLCAAFGPSI-KIWDLES 483
S G D + WDL K + + H + L P L S+ ++WD+ +
Sbjct: 232 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRT 291
Query: 484 KEMVEELRPEIINQTQTSKTDPPQCLSLAWSTDGQTLFAGYSDNTIRVWQV 636
K + L S D C TD Q + G D TI+ W +
Sbjct: 292 KMQIFAL----------SGHDNTVCSVFTRPTDPQVV-TGSHDTTIKFWDL 331
Score = 56.0 bits (129), Expect = 3e-08
Identities = 43/169 (25%), Positives = 70/169 (41%), Gaps = 2/169 (1%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 183
H + V +A S + + S DK +K W+ L + K GH V C+ P
Sbjct: 217 HIEQVRGLAVSNRHTYMFSAGDDKQVKCWD-LEQNKVIRSYHGHLSGVYCLALHPTL--D 273
Query: 184 IIVSCGWDRTVKVWHLTNCKLKINHL-GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLN 360
++++ G D +VW + K++I L GH + +V P +G D WDL
Sbjct: 274 VLLTGGRDSVCRVWDIRT-KMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLR 332
Query: 361 DGKHLHTLDHN-DIITALCFSPNRYWLCAAFGPSIKIWDLESKEMVEEL 504
GK + TL H+ + A+ P +A + K + L E +
Sbjct: 333 YGKTMSTLTHHKKSVRAMTLHPKENAFASASADNTKKFSLPKGEFCHNM 381
>At1g04510.1 68414.m00442 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 523
Score = 65.3 bits (152), Expect = 4e-11
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 5/163 (3%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHA-N 180
H+K V S+ F D +++ S DKT+++W + YT + D + VR HA N
Sbjct: 263 HSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSEDGNYTSRHT-LKDHSAEVRAVTVHATN 321
Query: 181 PIIVSCGWDRTVKVWHLTN--CKLKINHLGHSGYLNTVTV-SPDGSLCASGGKDMKAMLW 351
VS D T + L++ C ++ + T PDG + +G +W
Sbjct: 322 KYFVSASLDSTWCFYDLSSGLCLAQVTDASENDVNYTAAAFHPDGLILGTGTAQSIVKIW 381
Query: 352 DLNDGKHLHTL-DHNDIITALCFSPNRYWLCAAFGPSIKIWDL 477
D+ ++ HN IT++ FS N Y+L A +++WDL
Sbjct: 382 DVKSQANVAKFGGHNGEITSISFSENGYFLATAALDGVRLWDL 424
Score = 42.7 bits (96), Expect = 3e-04
Identities = 37/164 (22%), Positives = 73/164 (44%), Gaps = 5/164 (3%)
Frame = +1
Query: 172 HANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 351
H+ +I + G D T ++ + ++ GHS + ++ D L + D +W
Sbjct: 232 HSKDVIATGGIDTTAVLFDRPSGQILSTLTGHSKKVTSIKFVGDTDLVLTASSDKTVRIW 291
Query: 352 DLN-DGKHL--HTL-DHNDIITAL-CFSPNRYWLCAAFGPSIKIWDLESKEMVEELRPEI 516
+ DG + HTL DH+ + A+ + N+Y++ A+ + +DL S + ++
Sbjct: 292 GCSEDGNYTSRHTLKDHSAEVRAVTVHATNKYFVSASLDSTWCFYDLSSGLCLAQV---- 347
Query: 517 INQTQTSKTDPPQCLSLAWSTDGQTLFAGYSDNTIRVWQVSISA 648
T S+ D + A+ DG L G + + +++W V A
Sbjct: 348 ---TDASEND-VNYTAAAFHPDGLILGTGTAQSIVKIWDVKSQA 387
>At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to Fzr1
(GI:6463679){Homo sapiens}
Length = 481
Score = 63.7 bits (148), Expect = 1e-10
Identities = 57/210 (27%), Positives = 93/210 (44%), Gaps = 6/210 (2%)
Frame = +1
Query: 40 DNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVK 219
++R + SGSRD+ I + + + + GH V +++S H + + S G D +
Sbjct: 266 NSRILSSGSRDRNILQHDIRVQSDFVSKLVGHKSEVCGLKWS--HDDRELASGGNDNQLL 323
Query: 220 VWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGG--KDMKAMLWDLNDGKHLHTLDH 390
VW+ + + + H+ + +T SP SL ASGG D W+ +G L+++D
Sbjct: 324 VWNNHSQQPILKLTEHTAAVKAITWSPHQSSLLASGGGTADRCIRFWNTTNGNQLNSIDT 383
Query: 391 NDIITALCFSPNRYWLCAAFGPS---IKIWDLESKEMVEELRPEIINQTQTSKTDPPQCL 561
+ L +S N + + G S I +W S V L + + L
Sbjct: 384 GSQVCNLAWSKNVNEIVSTHGYSQNQIMLWKYPSMSKVATLTGHSM-----------RVL 432
Query: 562 SLAWSTDGQTLFAGYSDNTIRVWQVSISAR 651
LA S DGQT+ G D T+R W V S +
Sbjct: 433 YLATSPDGQTIVTGAGDETLRFWNVFPSVK 462
Score = 46.0 bits (104), Expect = 3e-05
Identities = 37/164 (22%), Positives = 77/164 (46%), Gaps = 6/164 (3%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 183
H +V + +S D+R++ SG D + +WN ++ + ++ H+ V + +SP H +
Sbjct: 297 HKSEVCGLKWSHDDRELASGGNDNQLLVWNNHSQ-QPILKLTEHTAAVKAITWSP-HQSS 354
Query: 184 IIVSCGW--DRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCAS--GGKDMKAMLW 351
++ S G DR ++ W+ TN ++N + + + S + + S G + MLW
Sbjct: 355 LLASGGGTADRCIRFWNTTNGN-QLNSIDTGSQVCNLAWSKNVNEIVSTHGYSQNQIMLW 413
Query: 352 DLNDGKHLHTL-DHNDIITALCFSPNRYWLCAAFG-PSIKIWDL 477
+ TL H+ + L SP+ + G +++ W++
Sbjct: 414 KYPSMSKVATLTGHSMRVLYLATSPDGQTIVTGAGDETLRFWNV 457
Score = 34.3 bits (75), Expect = 0.088
Identities = 31/149 (20%), Positives = 66/149 (44%), Gaps = 1/149 (0%)
Frame = +1
Query: 187 IVSCGWDRTVKVWHLTNCKL-KINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 363
+++ G V +W +N K+ K+ LG + + +V + +GS + G + +WD
Sbjct: 187 VLAVGLGTCVYLWTASNSKVTKLCDLGPNDSVCSVQWTREGSYISIGTSHGQVQVWDGTQ 246
Query: 364 GKHLHTLDHNDIITALCFSPNRYWLCAAFGPSIKIWDLESKEMVEELRPEIINQTQTSKT 543
K + T+ + T + +R + +I D+ ++ + +++ K+
Sbjct: 247 CKRVRTMGGHQTRTGVLAWNSRILSSGSRDRNILQHDI-------RVQSDFVSKLVGHKS 299
Query: 544 DPPQCLSLAWSTDGQTLFAGYSDNTIRVW 630
+ L WS D + L +G +DN + VW
Sbjct: 300 ---EVCGLKWSHDDRELASGGNDNQLLVW 325
Score = 33.5 bits (73), Expect = 0.15
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 111
H+ VL +A S D + IV+G+ D+T++ WN K
Sbjct: 427 HSMRVLYLATSPDGQTIVTGAGDETLRFWNVFPSVK 462
>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 315
Score = 63.7 bits (148), Expect = 1e-10
Identities = 56/209 (26%), Positives = 89/209 (42%), Gaps = 12/209 (5%)
Frame = +1
Query: 40 DNRQIVSGSRDKTIKLWNTLAECKYTIQ----DDGHSDWVSCVRFSPNHANPIIVSCGWD 207
++ +++ S D+T LW+ K ++ GH+ V V S ++ N I S D
Sbjct: 106 EDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFI-SGSCD 164
Query: 208 RTVKVWHLTNCKLKINHL-GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHL--- 375
T ++W + GH G +NTV PDG +G D L+D+ G L
Sbjct: 165 STARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVY 224
Query: 376 --HTLDHNDIITALCFSPNRYWLCAAFGP--SIKIWDLESKEMVEELRPEIINQTQTSKT 543
H N +T++ FS + L A + + +WD E+V +L Q S
Sbjct: 225 QPHGDGENGPVTSIAFSVSGRLLFAGYASNNTCYVWDTLLGEVVLDL-----GLQQDSHR 279
Query: 544 DPPQCLSLAWSTDGQTLFAGYSDNTIRVW 630
+ CL L S DG L G D+ +++W
Sbjct: 280 NRISCLGL--SADGSALCTGSWDSNLKIW 306
Score = 56.8 bits (131), Expect = 1e-08
Identities = 60/222 (27%), Positives = 104/222 (46%), Gaps = 17/222 (7%)
Frame = +1
Query: 16 VLSVAFSVDNRQIVSGSRDKTIKLWN--TLAECKYTIQDD----GHSDWVSCVRFSPNHA 177
V++ AFS + + + G D +++ + A+ T+ GH +VSC ++ PN
Sbjct: 48 VMTCAFSPNGQSVACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNED 107
Query: 178 NPIIVSCGWDRTVKVWHLTNCKLKINHLG---HSGY-LNTVTVSPDGS---LCASGGKDM 336
+I S G D+T +W +T LK + G SG+ + ++VS GS SG D
Sbjct: 108 AHLITSSG-DQTCILWDVTT-GLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDS 165
Query: 337 KAMLWDLN-DGKHLHTL-DHNDIITALCFSPNRY-WLCAAFGPSIKIWDLESKEMVEELR 507
A LWD + + T H + + F P+ Y + + + +++D+ + ++ +
Sbjct: 166 TARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQ 225
Query: 508 PEIINQTQTSKTDPPQCLSLAWSTDGQTLFAGY-SDNTIRVW 630
P + P S+A+S G+ LFAGY S+NT VW
Sbjct: 226 PH-----GDGENGP--VTSIAFSVSGRLLFAGYASNNTCYVW 260
Score = 49.2 bits (112), Expect = 3e-06
Identities = 47/168 (27%), Positives = 80/168 (47%), Gaps = 12/168 (7%)
Frame = +1
Query: 4 HTKDVLSVAFSVDN-RQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHAN 180
HT DVLSV+ S N +SGS D T +LW+T A + GH V+ V+F P+
Sbjct: 141 HTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYR 200
Query: 181 PIIVSCGWDRTVKVWHL-TNCKLKI---NHLGHSGYLNTVTVSPDGSLCASG-GKDMKAM 345
+ D T +++ + T +L++ + G +G + ++ S G L +G +
Sbjct: 201 --FGTGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIAFSVSGRLLFAGYASNNTCY 258
Query: 346 LWDLNDGKHLHTL-----DHNDIITALCFSPNRYWLC-AAFGPSIKIW 471
+WD G+ + L H + I+ L S + LC ++ ++KIW
Sbjct: 259 VWDTLLGEVVLDLGLQQDSHRNRISCLGLSADGSALCTGSWDSNLKIW 306
Score = 42.3 bits (95), Expect = 3e-04
Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 10/127 (7%)
Frame = +1
Query: 16 VLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVS 195
V S+ ++ + +IVS S+D + +WN L K T WV FSPN + V+
Sbjct: 6 VYSLDWTPERNRIVSASQDGRLIVWNALTSQK-THAIKLPCAWVMTCAFSPNGQS---VA 61
Query: 196 C-GWDRTVKVWHLTNCKLK-----INHL--GHSGYLNTVTVSP--DGSLCASGGKDMKAM 345
C G D ++ L++ K ++ + GH GY++ P D L S G D +
Sbjct: 62 CGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSG-DQTCI 120
Query: 346 LWDLNDG 366
LWD+ G
Sbjct: 121 LWDVTTG 127
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 63.7 bits (148), Expect = 1e-10
Identities = 56/209 (26%), Positives = 89/209 (42%), Gaps = 12/209 (5%)
Frame = +1
Query: 40 DNRQIVSGSRDKTIKLWNTLAECKYTIQ----DDGHSDWVSCVRFSPNHANPIIVSCGWD 207
++ +++ S D+T LW+ K ++ GH+ V V S ++ N I S D
Sbjct: 168 EDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFI-SGSCD 226
Query: 208 RTVKVWHLTNCKLKINHL-GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHL--- 375
T ++W + GH G +NTV PDG +G D L+D+ G L
Sbjct: 227 STARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVY 286
Query: 376 --HTLDHNDIITALCFSPNRYWLCAAFGP--SIKIWDLESKEMVEELRPEIINQTQTSKT 543
H N +T++ FS + L A + + +WD E+V +L Q S
Sbjct: 287 QPHGDGENGPVTSIAFSVSGRLLFAGYASNNTCYVWDTLLGEVVLDL-----GLQQDSHR 341
Query: 544 DPPQCLSLAWSTDGQTLFAGYSDNTIRVW 630
+ CL L S DG L G D+ +++W
Sbjct: 342 NRISCLGL--SADGSALCTGSWDSNLKIW 368
Score = 49.2 bits (112), Expect = 3e-06
Identities = 47/168 (27%), Positives = 80/168 (47%), Gaps = 12/168 (7%)
Frame = +1
Query: 4 HTKDVLSVAFSVDN-RQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHAN 180
HT DVLSV+ S N +SGS D T +LW+T A + GH V+ V+F P+
Sbjct: 203 HTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYR 262
Query: 181 PIIVSCGWDRTVKVWHL-TNCKLKI---NHLGHSGYLNTVTVSPDGSLCASG-GKDMKAM 345
+ D T +++ + T +L++ + G +G + ++ S G L +G +
Sbjct: 263 --FGTGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIAFSVSGRLLFAGYASNNTCY 320
Query: 346 LWDLNDGKHLHTL-----DHNDIITALCFSPNRYWLC-AAFGPSIKIW 471
+WD G+ + L H + I+ L S + LC ++ ++KIW
Sbjct: 321 VWDTLLGEVVLDLGLQQDSHRNRISCLGLSADGSALCTGSWDSNLKIW 368
Score = 46.4 bits (105), Expect = 2e-05
Identities = 40/131 (30%), Positives = 61/131 (46%), Gaps = 10/131 (7%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 183
HT V S+ ++ + +IVS S+D + +WN L K T WV FSPN +
Sbjct: 64 HTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQK-THAIKLPCAWVMTCAFSPNGQS- 121
Query: 184 IIVSC-GWDRTVKVWHLTNCKLK-----INHL--GHSGYLNTVTVSP--DGSLCASGGKD 333
V+C G D ++ L++ K ++ + GH GY++ P D L S G D
Sbjct: 122 --VACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSG-D 178
Query: 334 MKAMLWDLNDG 366
+LWD+ G
Sbjct: 179 QTCILWDVTTG 189
Score = 29.1 bits (62), Expect = 3.3
Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 2/128 (1%)
Frame = +1
Query: 262 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALC-FSPN-RYW 435
GH+G + ++ +P+ + S +D + ++W+ + H + C FSPN +
Sbjct: 63 GHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQSV 122
Query: 436 LCAAFGPSIKIWDLESKEMVEELRPEIINQTQTSKTDPPQCLSLAWSTDGQTLFAGYSDN 615
C I+ L S + P +++ T C + D L D
Sbjct: 123 ACGGLDSVCSIFSLSSTADKDGTVP--VSRMLTGHRGYVSCCQYVPNEDAH-LITSSGDQ 179
Query: 616 TIRVWQVS 639
T +W V+
Sbjct: 180 TCILWDVT 187
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 63.3 bits (147), Expect = 2e-10
Identities = 63/234 (26%), Positives = 98/234 (41%), Gaps = 23/234 (9%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLW-NTLAECKYTIQDDGHSDWVSCVRFSPNHAN 180
H + + S+ +S + +VSG T+K W N + K H + + + F
Sbjct: 164 HDQPIRSMVWSHNENYMVSGDDGGTLKYWQNNMNNVK--ANKTAHKESIRDLSFCKTDLK 221
Query: 181 PIIVSCGWDRTVKVWHLTNCK-------------LKIN------HLGHSGYLNTVTVSPD 303
SC D TVKVW T C ++I + GH + +V P
Sbjct: 222 --FCSCSDDTTVKVWDFTKCVDESSLTGYIGKGVIEIRFGVMPCNAGHGWDVKSVDWHPT 279
Query: 304 GSLCASGGKDMKAMLWDLNDGKHLHTL-DHNDIITALCFSPNRYWLCAAFGPS-IKIWDL 477
SL SGGKD LWD G+ L +L H +I+ ++ ++ N WL A IK++D+
Sbjct: 280 KSLLVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKWNQNGNWLLTASKDQIIKLYDI 339
Query: 478 ESKEMVEELRPEIINQTQTSKTDPPQCLSLAWSTDGQTLF-AGYSDNTIRVWQV 636
+ + ++ R + T SLAW + F +G SD +I W V
Sbjct: 340 RTMKELQSFRGHTKDVT-----------SLAWHPCHEEYFVSGSSDGSICHWIV 382
Score = 48.4 bits (110), Expect = 5e-06
Identities = 45/170 (26%), Positives = 75/170 (44%), Gaps = 3/170 (1%)
Frame = +1
Query: 130 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 309
GH V V + P + ++VS G D+ VK+W + + + GH + +V + +G+
Sbjct: 266 GHGWDVKSVDWHPTKS--LLVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKWNQNGN 323
Query: 310 LCASGGKDMKAMLWDLNDGKHLHTL-DHNDIITALCFSP--NRYWLCAAFGPSIKIWDLE 480
+ KD L+D+ K L + H +T+L + P Y++ + SI W +
Sbjct: 324 WLLTASKDQIIKLYDIRTMKELQSFRGHTKDVTSLAWHPCHEEYFVSGSSDGSICHWIVG 383
Query: 481 SKEMVEELRPEIINQTQTSKTDPPQCLSLAWSTDGQTLFAGYSDNTIRVW 630
E + EI N S D LAW G L +G +D+T + W
Sbjct: 384 H----ENPQIEIPNAHDNSVWD------LAWHPIGYLLCSGSNDHTTKFW 423
Score = 41.1 bits (92), Expect = 8e-04
Identities = 36/160 (22%), Positives = 72/160 (45%), Gaps = 4/160 (2%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 183
H DV SV + +VSG +D+ +KLW+T + + GH + V V+++ N
Sbjct: 267 HGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTRSG-RELCSLHGHKNIVLSVKWNQN--GN 323
Query: 184 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAMLWDL- 357
+++ D+ +K++ + K + GH+ + ++ P SG D W +
Sbjct: 324 WLLTASKDQIIKLYDIRTMKELQSFRGHTKDVTSLAWHPCHEEYFVSGSSDGSICHWIVG 383
Query: 358 NDGKHLHTLD-HNDIITALCFSPNRYWLCAAFGP-SIKIW 471
++ + + H++ + L + P Y LC+ + K W
Sbjct: 384 HENPQIEIPNAHDNSVWDLAWHPIGYLLCSGSNDHTTKFW 423
>At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1218
Score = 62.5 bits (145), Expect = 3e-10
Identities = 37/120 (30%), Positives = 56/120 (46%), Gaps = 1/120 (0%)
Frame = +1
Query: 1 DHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDDGHSDWVSCVRFSPNHA 177
+H V V F VSG D IK+WN C +T+ GH D++ V+F +H
Sbjct: 49 EHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKTHRCLFTLL--GHLDYIRTVQF--HHE 104
Query: 178 NPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 357
NP IVS D+T+++W+ + GH+ Y+ + P L S D +WD+
Sbjct: 105 NPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
Score = 52.4 bits (120), Expect = 3e-07
Identities = 28/82 (34%), Positives = 44/82 (53%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 183
H + +V F +N IVS S D+TI++WN + ++ GH+ +V C F P
Sbjct: 92 HLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCISVL-TGHNHYVMCASFHPK--ED 148
Query: 184 IIVSCGWDRTVKVWHLTNCKLK 249
++VS D+TV+VW + K K
Sbjct: 149 LVVSASLDQTVRVWDIGALKKK 170
Score = 49.2 bits (112), Expect = 3e-06
Identities = 30/119 (25%), Positives = 50/119 (42%), Gaps = 2/119 (1%)
Frame = +1
Query: 127 DGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDG 306
D H V V F +++ P+ VS G D +KVW+ + LGH Y+ TV +
Sbjct: 48 DEHEGPVRGVHF--HNSQPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHEN 105
Query: 307 SLCASGGKDMKAMLWDLNDGKHLHTL-DHNDIITALCFSPNR-YWLCAAFGPSIKIWDL 477
S D +W+ + L HN + F P + A+ ++++WD+
Sbjct: 106 PWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
Score = 39.5 bits (88), Expect = 0.002
Identities = 33/127 (25%), Positives = 53/127 (41%), Gaps = 3/127 (2%)
Frame = +1
Query: 109 KYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKL-KINHL-GHSGYLN 282
KY ++ GH V+ F P P+IVS DR VK+W + K +++ L GH ++
Sbjct: 197 KYVLE--GHDRGVNWASFHPTL--PLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVS 252
Query: 283 TVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL-DHNDIITALCFSPNRYWLCAAFGPS 459
+V + S +D +WD + T +D L P L A
Sbjct: 253 SVMFHAKQDIIVSNSEDKSIRVWDATKRTGIQTFRREHDRFWILAVHPEINLLAAGHDNG 312
Query: 460 IKIWDLE 480
+ ++ LE
Sbjct: 313 MIVFKLE 319
Score = 37.5 bits (83), Expect = 0.009
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDD--GHSDWVSCVRFSPNHA 177
H + V +F IVSG+ D+ +KLW + E K D GH + VS V F HA
Sbjct: 203 HDRGVNWASFHPTLPLIVSGADDRQVKLWR-MNETKAWEVDTLRGHMNNVSSVMF---HA 258
Query: 178 -NPIIVSCGWDRTVKVWHLT 234
IIVS D++++VW T
Sbjct: 259 KQDIIVSNSEDKSIRVWDAT 278
Score = 35.1 bits (77), Expect = 0.050
Identities = 41/174 (23%), Positives = 77/174 (44%), Gaps = 4/174 (2%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 183
H V+ +F +VS S D+T+++W+ A ++ S +RFS +++
Sbjct: 134 HNHYVMCASFHPKEDLVVSASLDQTVRVWDIGA-----LKKKSASPADDLMRFSQMNSD- 187
Query: 184 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 363
+ G D VK L+ GH +N + P L SG D + LW +N+
Sbjct: 188 --LFGGVDAIVKY------VLE----GHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNE 235
Query: 364 GK--HLHTL-DHNDIITALCFSPNRYWLCA-AFGPSIKIWDLESKEMVEELRPE 513
K + TL H + ++++ F + + + + SI++WD + ++ R E
Sbjct: 236 TKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGIQTFRRE 289
>At1g73720.1 68414.m08536 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Will die slowly protein
(SP:Q9V3J8)[Drosophila melanogaster]
Length = 511
Score = 62.5 bits (145), Expect = 3e-10
Identities = 46/198 (23%), Positives = 82/198 (41%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 183
H VL + FS D+ + SGS+D IK+W + D HS V+ + FS + +
Sbjct: 262 HDDPVLCIDFSRDSEMLASGSQDGKIKIWRIRTGVCIR-RFDAHSQGVTSLSFSRDGSQ- 319
Query: 184 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 363
++S +D+T ++ L + KL GH+ Y+N + DGS + D +WD
Sbjct: 320 -LLSTSFDQTARIHGLKSGKLLKEFRGHTSYVNHAIFTSDGSRIITASSDCTVKVWDSKT 378
Query: 364 GKHLHTLDHNDIITALCFSPNRYWLCAAFGPSIKIWDLESKEMVEELRPEIINQTQTSKT 543
L T + S N L I + + S + L+ +++ +
Sbjct: 379 TDCLQTFKPPPPLRGTDASVNSIHLFPKNTEHIVVCNKTSSIYIMTLQGQVVKSFSSGNR 438
Query: 544 DPPQCLSLAWSTDGQTLF 597
+ ++ ST G ++
Sbjct: 439 EGGDFVAACVSTKGDWIY 456
Score = 51.6 bits (118), Expect = 5e-07
Identities = 45/177 (25%), Positives = 78/177 (44%), Gaps = 10/177 (5%)
Frame = +1
Query: 130 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKIN--------HLGHSGYLNT 285
G C RFSP+ + S D ++VW + KLK + + H +
Sbjct: 211 GKKSHAECARFSPD--GQFLASSSVDGFIEVWDYISGKLKKDLQYQADESFMMHDDPVLC 268
Query: 286 VTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD-HNDIITALCFSPN-RYWLCAAFGPS 459
+ S D + ASG +D K +W + G + D H+ +T+L FS + L +F +
Sbjct: 269 IDFSRDSEMLASGSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLLSTSFDQT 328
Query: 460 IKIWDLESKEMVEELRPEIINQTQTSKTDPPQCLSLAWSTDGQTLFAGYSDNTIRVW 630
+I L+S ++++E R TS + +++DG + SD T++VW
Sbjct: 329 ARIHGLKSGKLLKEFRGH------TSYVN-----HAIFTSDGSRIITASSDCTVKVW 374
>At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat
family protein similar to TBP-associated factor
(GI:1732075) [Homo sapiens] and to 100 kDa subunit of
Pol II transcription factor (GI:1491718) {Homo sapiens];
contains Pfam PF00400: WD domain, G-beta repeat (6
copies)|8689032|gb|AV528749.1|AV528749
Length = 666
Score = 62.1 bits (144), Expect = 4e-10
Identities = 46/162 (28%), Positives = 75/162 (46%), Gaps = 2/162 (1%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 183
H V FS S S D+T ++W+ I GH +S V + PN N
Sbjct: 459 HNYPVWDAQFSPFGHYFASCSHDRTARIWSMDRIQPLRIMA-GH---LSDVDWHPN-CNY 513
Query: 184 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 363
I D+TV++W + + +GH + ++ +SPDG ASG +D M+WDL+
Sbjct: 514 IATGSS-DKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLST 572
Query: 364 GKHLHTL-DHNDIITALCFSPNRYWLCAAFGP-SIKIWDLES 483
+ + L HN + +L +S L + ++K+WD+ S
Sbjct: 573 ARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDVTS 614
Score = 56.0 bits (129), Expect = 3e-08
Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 1/109 (0%)
Frame = +1
Query: 52 IVSGSRDKTIKLWNT-LAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWH 228
I +GS DKT++LW+ EC GH V + SP+ + S D T+ +W
Sbjct: 514 IATGSSDKTVRLWDVQTGECVRIFI--GHRSMVLSLAMSPD--GRYMASGDEDGTIMMWD 569
Query: 229 LTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHL 375
L+ + +GH+ + +++ S +GSL ASG D LWD+ L
Sbjct: 570 LSTARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDVTSSTKL 618
Score = 50.0 bits (114), Expect = 2e-06
Identities = 44/171 (25%), Positives = 79/171 (46%), Gaps = 1/171 (0%)
Frame = +1
Query: 130 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 309
GHS V FSP ++S D T+++W + + GH+ + SP G
Sbjct: 416 GHSGPVYSATFSP--PGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGH 473
Query: 310 LCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCFSPN-RYWLCAAFGPSIKIWDLESK 486
AS D A +W ++ + L + + ++ + + PN Y + ++++WD+++
Sbjct: 474 YFASCSHDRTARIWSMDRIQPLRIMAGH--LSDVDWHPNCNYIATGSSDKTVRLWDVQTG 531
Query: 487 EMVEELRPEIINQTQTSKTDPPQCLSLAWSTDGQTLFAGYSDNTIRVWQVS 639
E V R I +++ LSLA S DG+ + +G D TI +W +S
Sbjct: 532 ECV---RIFIGHRSMV--------LSLAMSPDGRYMASGDEDGTIMMWDLS 571
Score = 40.7 bits (91), Expect = 0.001
Identities = 34/128 (26%), Positives = 50/128 (39%), Gaps = 2/128 (1%)
Frame = +1
Query: 259 LGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL-DHNDIITALCFSP-NRY 432
LGHSG + + T SP G S D LW +L HN + FSP Y
Sbjct: 415 LGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHY 474
Query: 433 WLCAAFGPSIKIWDLESKEMVEELRPEIINQTQTSKTDPPQCLSLAWSTDGQTLFAGYSD 612
+ + + +IW + + ++P I S D W + + G SD
Sbjct: 475 FASCSHDRTARIWSM------DRIQPLRIMAGHLSDVD--------WHPNCNYIATGSSD 520
Query: 613 NTIRVWQV 636
T+R+W V
Sbjct: 521 KTVRLWDV 528
Score = 38.3 bits (85), Expect = 0.005
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDD--GHSDWVSCVRFSPNHA 177
H V S+++S + + SGS D T+KLW+ + K T ++ G+S+ + +R P +
Sbjct: 582 HNSCVWSLSYSGEGSLLASGSADCTVKLWDVTSSTKLTKAEEKNGNSNRLRSLRTFPTKS 641
Query: 178 NPI 186
P+
Sbjct: 642 TPV 644
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +1
Query: 265 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 357
H+G LN ++S DGSL A G D +WD+
Sbjct: 352 HNG-LNCSSISHDGSLVAGGFSDSSIKVWDM 381
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 60.9 bits (141), Expect = 9e-10
Identities = 58/228 (25%), Positives = 101/228 (44%), Gaps = 17/228 (7%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHS------DWVSCVRFS 165
H + S+ ++ +++GS D+T +W+ AE ++ Q + HS DW + V F+
Sbjct: 364 HKGPIFSLKWNKKGDYLLTGSVDRTAVVWDVKAE-EWKQQFEFHSGPTLDVDWRNNVSFA 422
Query: 166 PNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAM 345
+ + +I C K+ K GH G +N V P GSL AS D A
Sbjct: 423 TSSTDSMIYLC------KIGETRPAK---TFTGHQGEVNCVKWDPTGSLLASCSDDSTAK 473
Query: 346 LWDLNDGKHLHTL-DHNDIITALCFS--------PNRY--WLCAAFGPSIKIWDLESKEM 492
+W++ +H L +H I + +S PN+ A+F ++K+WD E +M
Sbjct: 474 IWNIKQSTFVHDLREHTKEIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLWDAELGKM 533
Query: 493 VEELRPEIINQTQTSKTDPPQCLSLAWSTDGQTLFAGYSDNTIRVWQV 636
+ +P SLA+S +G+ + +G D +I +W +
Sbjct: 534 LCSF---------NGHREP--VYSLAFSPNGEYIASGSLDKSIHIWSI 570
Score = 60.9 bits (141), Expect = 9e-10
Identities = 41/156 (26%), Positives = 70/156 (44%), Gaps = 7/156 (4%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSP----- 168
H +V V + + S S D T K+WN + + + H+ + +R+SP
Sbjct: 447 HQGEVNCVKWDPTGSLLASCSDDSTAKIWN-IKQSTFVHDLREHTKEIYTIRWSPTGPGT 505
Query: 169 NHANP--IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKA 342
N+ N + S +D TVK+W K+ + GH + ++ SP+G ASG D
Sbjct: 506 NNPNKQLTLASASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKSI 565
Query: 343 MLWDLNDGKHLHTLDHNDIITALCFSPNRYWLCAAF 450
+W + +GK + T N I +C++ + A F
Sbjct: 566 HIWSIKEGKIVKTYTGNGGIFEVCWNKEGNKIAACF 601
Score = 60.1 bits (139), Expect = 2e-09
Identities = 54/219 (24%), Positives = 93/219 (42%), Gaps = 11/219 (5%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 183
H+ L V + +N + S D I L + E + GH V+CV++ P +
Sbjct: 406 HSGPTLDVDWR-NNVSFATSSTDSMIYLCK-IGETRPAKTFTGHQGEVNCVKWDPTGS-- 461
Query: 184 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS---------LCASGGKDM 336
++ SC D T K+W++ + H+ + T+ SP G AS D
Sbjct: 462 LLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTIRWSPTGPGTNNPNKQLTLASASFDS 521
Query: 337 KAMLWDLNDGKHLHTLD-HNDIITALCFSPN-RYWLCAAFGPSIKIWDLESKEMVEELRP 510
LWD GK L + + H + + +L FSPN Y + SI IW ++ ++V+
Sbjct: 522 TVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKSIHIWSIKEGKIVK---- 577
Query: 511 EIINQTQTSKTDPPQCLSLAWSTDGQTLFAGYSDNTIRV 627
+ T + W+ +G + A ++DN++ V
Sbjct: 578 --------TYTGNGGIFEVCWNKEGNKIAACFADNSVCV 608
Score = 37.1 bits (82), Expect = 0.012
Identities = 34/144 (23%), Positives = 66/144 (45%), Gaps = 19/144 (13%)
Frame = +1
Query: 127 DGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGH------------- 267
+GH+ V +SP+ + ++ S D T ++W + K H G
Sbjct: 262 EGHTSEVCACAWSPSAS--LLASGSGDATARIWSIPEGSFKAVHTGRNINALILKHAKGK 319
Query: 268 ----SGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD-HNDIITALCFS-PNR 429
S + T+ + +G+L A+G D +A +W LN G+ + TL H I +L ++
Sbjct: 320 SNEKSKDVTTLDWNGEGTLLATGSCDGQARIWTLN-GELISTLSKHKGPIFSLKWNKKGD 378
Query: 430 YWLCAAFGPSIKIWDLESKEMVEE 501
Y L + + +WD++++E ++
Sbjct: 379 YLLTGSVDRTAVVWDVKAEEWKQQ 402
Score = 36.3 bits (80), Expect = 0.022
Identities = 44/216 (20%), Positives = 86/216 (39%), Gaps = 2/216 (0%)
Frame = +1
Query: 1 DHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHAN 180
+ +KDV ++ ++ + + +GS D ++W E T+ H + +++ N
Sbjct: 322 EKSKDVTTLDWNGEGTLLATGSCDGQARIWTLNGELISTLSK--HKGPIFSLKW--NKKG 377
Query: 181 PIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLN 360
+++ DRT VW + + K HSG V + S A+ D L +
Sbjct: 378 DYLLTGSVDRTAVVWDVKAEEWKQQFEFHSGPTLDVDWRNNVSF-ATSSTDSMIYLCKIG 436
Query: 361 DGKHLHTL-DHNDIITALCFSPNRYWLCAAFGPS-IKIWDLESKEMVEELRPEIINQTQT 534
+ + T H + + + P L + S KIW+++ V +LR E + T
Sbjct: 437 ETRPAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLR-EHTKEIYT 495
Query: 535 SKTDPPQCLSLAWSTDGQTLFAGYSDNTIRVWQVSI 642
+ P TL + D+T+++W +
Sbjct: 496 IRWSPTG-PGTNNPNKQLTLASASFDSTVKLWDAEL 530
Score = 35.9 bits (79), Expect = 0.029
Identities = 42/152 (27%), Positives = 62/152 (40%), Gaps = 10/152 (6%)
Frame = +1
Query: 211 TVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG--KHLHT- 381
T + H+ N ++I GH+ + SP SL ASG D A +W + +G K +HT
Sbjct: 247 TSQTSHIPNSDVRILE-GHTSEVCACAWSPSASLLASGSGDATARIWSIPEGSFKAVHTG 305
Query: 382 LDHNDIIT--ALCFSPNRYWLCAAF-----GPSIKIWDLESKEMVEELRPEIINQTQTSK 540
+ N +I A S + G + + + + L E+I + SK
Sbjct: 306 RNINALILKHAKGKSNEKSKDVTTLDWNGEGTLLATGSCDGQARIWTLNGELI--STLSK 363
Query: 541 TDPPQCLSLAWSTDGQTLFAGYSDNTIRVWQV 636
P SL W+ G L G D T VW V
Sbjct: 364 HKGP-IFSLKWNKKGDYLLTGSVDRTAVVWDV 394
Score = 29.5 bits (63), Expect = 2.5
Identities = 28/133 (21%), Positives = 55/133 (41%), Gaps = 15/133 (11%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFS---PNH 174
HT +V + A+S + SGS D T ++W ++ E + G + ++ + N
Sbjct: 264 HTSEVCACAWSPSASLLASGSGDATARIW-SIPEGSFKAVHTGRNINALILKHAKGKSNE 322
Query: 175 ANPIIVSCGW------------DRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCA 318
+ + + W D ++W L N +L H G + ++ + G
Sbjct: 323 KSKDVTTLDWNGEGTLLATGSCDGQARIWTL-NGELISTLSKHKGPIFSLKWNKKGDYLL 381
Query: 319 SGGKDMKAMLWDL 357
+G D A++WD+
Sbjct: 382 TGSVDRTAVVWDV 394
>At3g18140.1 68416.m02306 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe]
Length = 305
Score = 60.9 bits (141), Expect = 9e-10
Identities = 58/223 (26%), Positives = 102/223 (45%), Gaps = 12/223 (5%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE-CKYTIQDDGHSDWVSCVRFSPNHAN 180
HT +V++V F D + + SGS D T+K+W+ A C+ + V+ V PN
Sbjct: 77 HTNNVMAVGFQCDAKWMYSGSEDGTVKIWDLRAPGCQKEYESVAA---VNTVVLHPNQTE 133
Query: 181 PIIVSCGWDRTVKVWHL--TNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 354
++S + ++VW L +C ++ + + ++TV DG++ + +W
Sbjct: 134 --LISGDQNGNIRVWDLRANSCSCELVPEVDTA-VRSLTVMWDGTMVVAANNRGTCYVWR 190
Query: 355 LNDGKH-------LHTLD-HNDIITALCFSP-NRYWLCAAFGPSIKIWDLESKEMVEELR 507
L GK LH L HN I SP N+Y A+ ++KIW+++ ++
Sbjct: 191 LLRGKQTMTEFEPLHKLQAHNGHILKCLLSPANKYLATASSDKTVKIWNVDGFKL----- 245
Query: 508 PEIINQTQTSKTDPPQCLSLAWSTDGQTLFAGYSDNTIRVWQV 636
+++ Q D C+ +S DG+ L SD T R+W +
Sbjct: 246 EKVLTGHQRWVWD---CV---FSVDGEFLVTASSDMTARLWSM 282
Score = 49.6 bits (113), Expect = 2e-06
Identities = 34/139 (24%), Positives = 57/139 (41%), Gaps = 6/139 (4%)
Frame = +1
Query: 16 VLSVAFSVDNRQIVSGSRDKTIKLWN------TLAECKYTIQDDGHSDWVSCVRFSPNHA 177
V S+ D +V+ + T +W T+ E + + H+ + SP A
Sbjct: 165 VRSLTVMWDGTMVVAANNRGTCYVWRLLRGKQTMTEFEPLHKLQAHNGHILKCLLSP--A 222
Query: 178 NPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 357
N + + D+TVK+W++ KL+ GH ++ S DG + DM A LW +
Sbjct: 223 NKYLATASSDKTVKIWNVDGFKLEKVLTGHQRWVWDCVFSVDGEFLVTASSDMTARLWSM 282
Query: 358 NDGKHLHTLDHNDIITALC 414
GK + + T C
Sbjct: 283 PAGKEVKVYQGHHKATVCC 301
Score = 31.9 bits (69), Expect = 0.47
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSC 153
H + V FSVD +V+ S D T +LW+ A + + H V C
Sbjct: 252 HQRWVWDCVFSVDGEFLVTASSDMTARLWSMPAGKEVKVYQGHHKATVCC 301
>At1g52360.1 68414.m05909 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to (SP:O55029) Coatomer
beta' subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:O55029) [Mus musculus]; similar to GI:298096 from
[Homo sapiens]
Length = 926
Score = 60.5 bits (140), Expect = 1e-09
Identities = 42/143 (29%), Positives = 62/143 (43%), Gaps = 3/143 (2%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 183
H+ + VA ++S S D IKLW+ T +GHS +V V F+P N
Sbjct: 98 HSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWACTQIFEGHSHYVMQVTFNPKDTN- 156
Query: 184 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVT--VSPDGSLCASGGKDMKAMLWDL 357
S DRT+K+W+L + H +N V D +G D A +WD
Sbjct: 157 TFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDY 216
Query: 358 NDGKHLHTLD-HNDIITALCFSP 423
+ TL+ H ++A+CF P
Sbjct: 217 QTKSCVQTLEGHTHNVSAVCFHP 239
Score = 57.2 bits (132), Expect = 1e-08
Identities = 51/216 (23%), Positives = 90/216 (41%), Gaps = 8/216 (3%)
Frame = +1
Query: 16 VLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVS 195
V S F + +V+G+ D I+++N K + + HSD++ CV P P ++S
Sbjct: 60 VRSAKFVARKQWVVAGADDMYIRVYNYNTMDKVKVFE-AHSDYIRCVAVHP--TLPYVLS 116
Query: 196 CGWDRTVKVWHLTN---CKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAMLWDLND 363
D +K+W C GHS Y+ VT +P D + AS D +W+L
Sbjct: 117 SSDDMLIKLWDWEKGWACTQIFE--GHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGS 174
Query: 364 GKHLHTLD-HNDIITALCF---SPNRYWLCAAFGPSIKIWDLESKEMVEELRPEIINQTQ 531
TLD H + + + Y + + + K+WD ++K V+ L N +
Sbjct: 175 PDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVS- 233
Query: 532 TSKTDPPQCLSLAWSTDGQTLFAGYSDNTIRVWQVS 639
++ + + + G D T+R+W +
Sbjct: 234 ----------AVCFHPELPIIITGSEDGTVRIWHAT 259
Score = 54.8 bits (126), Expect = 6e-08
Identities = 34/131 (25%), Positives = 60/131 (45%), Gaps = 2/131 (1%)
Frame = +1
Query: 4 HTKDVLSVAFSV-DNRQIVSGSRDKTIKLWNTLA-ECKYTIQDDGHSDWVSCVRFSPNHA 177
H+ V+ V F+ D S S D+TIK+WN + + +T+ D H V+CV +
Sbjct: 141 HSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL--DAHQKGVNCVDYFTGGD 198
Query: 178 NPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 357
P +++ D T KVW GH+ ++ V P+ + +G +D +W
Sbjct: 199 KPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHA 258
Query: 358 NDGKHLHTLDH 390
+ +TL++
Sbjct: 259 TTYRLENTLNY 269
>At1g24130.1 68414.m03044 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats
(PF00400);similar to beta transducin-like protein
HET-D2Y (GI:17225210) [Podospora anserina].
Length = 415
Score = 59.7 bits (138), Expect = 2e-09
Identities = 47/172 (27%), Positives = 79/172 (45%), Gaps = 5/172 (2%)
Frame = +1
Query: 133 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCK-LKINHLGHSGYLNTVTVSPDGS 309
H D VS + S + + ++ S WDR+ K+W ++ K L H +N + VS DG
Sbjct: 191 HVDAVSSLALSQDGS--LLYSASWDRSFKIWRTSDFKCLDSIEKAHDDAINAIVVSKDG- 247
Query: 310 LCASGGKDMKAMLWDLNDGKH--LHTL-DHNDIITALCFSPN-RYWLCAAFGPSIKIWDL 477
+G D K +W+ D KH + TL H + AL S + + A SI +W+
Sbjct: 248 FVYTGSADKKIKVWNKKDKKHSLVATLTKHLSAVNALAISEDGKVLYSGACDRSILVWER 307
Query: 478 ESKEMVEELRPEIINQTQTSKTDPPQCLSLAWSTDGQTLFAGYSDNTIRVWQ 633
EEL ++ + + CL++A + +G +D ++RVW+
Sbjct: 308 LINGDDEELHMSVVGALRGHR-KAIMCLAVA----SDLVLSGSADKSLRVWR 354
Score = 50.0 bits (114), Expect = 2e-06
Identities = 34/131 (25%), Positives = 62/131 (47%), Gaps = 2/131 (1%)
Frame = +1
Query: 247 KINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD--HNDIITALCFS 420
K + H ++++ +S DGSL S D +W +D K L +++ H+D I A+ S
Sbjct: 185 KCTWVHHVDAVSSLALSQDGSLLYSASWDRSFKIWRTSDFKCLDSIEKAHDDAINAIVVS 244
Query: 421 PNRYWLCAAFGPSIKIWDLESKEMVEELRPEIINQTQTSKTDPPQCLSLAWSTDGQTLFA 600
+ + + IK+W+ + K+ + T T L++ S DG+ L++
Sbjct: 245 KDGFVYTGSADKKIKVWNKKDKK-------HSLVATLTKHLSAVNALAI--SEDGKVLYS 295
Query: 601 GYSDNTIRVWQ 633
G D +I VW+
Sbjct: 296 GACDRSILVWE 306
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1216
Score = 58.8 bits (136), Expect = 4e-09
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Frame = +1
Query: 1 DHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDDGHSDWVSCVRFSPNHA 177
+H V V F VSG D IK+WN C +T+ GH D++ V+F +H
Sbjct: 49 EHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKNHRCLFTLL--GHLDYIRTVQF--HHE 104
Query: 178 NPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 357
P IVS D+T+++W+ + GH+ Y+ + P L S D +WD+
Sbjct: 105 YPWIVSASDDQTIRIWNWQSRTCVSVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
Score = 50.0 bits (114), Expect = 2e-06
Identities = 31/119 (26%), Positives = 51/119 (42%), Gaps = 2/119 (1%)
Frame = +1
Query: 127 DGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDG 306
D H V V F +++ P+ VS G D +KVW+ N + LGH Y+ TV +
Sbjct: 48 DEHEGPVRGVHF--HNSQPLFVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEY 105
Query: 307 SLCASGGKDMKAMLWDLNDGKHLHTL-DHNDIITALCFSPNR-YWLCAAFGPSIKIWDL 477
S D +W+ + L HN + F P + A+ ++++WD+
Sbjct: 106 PWIVSASDDQTIRIWNWQSRTCVSVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
Score = 41.5 bits (93), Expect = 6e-04
Identities = 48/199 (24%), Positives = 82/199 (41%), Gaps = 29/199 (14%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 183
H + +V F + IVS S D+TI++WN + ++ GH+ +V C F P
Sbjct: 92 HLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVSVLT-GHNHYVMCASFHPKEDLV 150
Query: 184 IIVSCG-----WD------RTVK----VWHLTNCK----------LKINHLGHSGYLNTV 288
+ S WD +TV + LT +K GH +N
Sbjct: 151 VSASLDQTVRVWDIGALRKKTVSPADDIMRLTQMNSDLFGGVDAIVKYVLEGHDRGVNWA 210
Query: 289 TVSPDGSLCASGGKDMKAMLWDLNDGK--HLHTL-DHNDIITALCFSPNRYWLCA-AFGP 456
P L SG D + LW +N+ K + TL H + ++++ F + + + +
Sbjct: 211 AFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDK 270
Query: 457 SIKIWDLESKEMVEELRPE 513
SI++WD + ++ R E
Sbjct: 271 SIRVWDATKRTGLQTFRRE 289
Score = 39.9 bits (89), Expect = 0.002
Identities = 38/111 (34%), Positives = 54/111 (48%), Gaps = 4/111 (3%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDD--GHSDWVSCVRFSPNHA 177
H + V AF IVSG+ D+ +KLW + E K D GH + VS V F HA
Sbjct: 203 HDRGVNWAAFHPTLPLIVSGADDRQVKLWR-MNETKAWEVDTLRGHMNNVSSVMF---HA 258
Query: 178 -NPIIVSCGWDRTVKVWHLT-NCKLKINHLGHSGYLNTVTVSPDGSLCASG 324
IIVS D++++VW T L+ H + + V P+ +L A+G
Sbjct: 259 KQDIIVSNSEDKSIRVWDATKRTGLQTFRREHDRFW-ILAVHPEMNLLAAG 308
>At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 WD-40
repeats ; similar to LEUNIG (GP:11141605)[Arabidopsis
thaliana]
Length = 785
Score = 58.4 bits (135), Expect = 5e-09
Identities = 37/171 (21%), Positives = 76/171 (44%), Gaps = 3/171 (1%)
Frame = +1
Query: 1 DHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHAN 180
+H + V F ++ Q+ + S DKTIK+W+ + GH+ V + F P
Sbjct: 548 EHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTE 607
Query: 181 PIIVSCGWDRTVKVWHL-TNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 357
++ SC + ++ W + +C + G V P + + ++D+
Sbjct: 608 -LLCSCDSNNDIRFWDINASCVRAV-----KGASTQVRFQPRTGQFLAAASENTVSIFDI 661
Query: 358 -NDGKHLHTL-DHNDIITALCFSPNRYWLCAAFGPSIKIWDLESKEMVEEL 504
N+ K ++ H+ + ++C+SPN + + ++K+W L S + + EL
Sbjct: 662 ENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSEDAVKLWSLSSGDCIHEL 712
Score = 43.2 bits (97), Expect = 2e-04
Identities = 42/152 (27%), Positives = 69/152 (45%), Gaps = 3/152 (1%)
Frame = +1
Query: 25 VAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGW 204
V F Q ++ + + T+ +++ K GHS V V +SPN ++ S
Sbjct: 638 VRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPN--GELVASVSE 695
Query: 205 DRTVKVWHLTNCKLKINHLGHSGY-LNTVTVSPD-GSLCASGGKDMKAMLWDLNDGKHLH 378
D VK+W L++ I+ L +SG ++V P L GG LW+ + K +
Sbjct: 696 D-AVKLWSLSSGDC-IHELSNSGNKFHSVVFHPSYPDLLVIGGYQA-IELWNTMENKCMT 752
Query: 379 TLDHNDIITALCFSPNRYWLC-AAFGPSIKIW 471
H +I+AL SP+ + A+ S+KIW
Sbjct: 753 VAGHECVISALAQSPSTGVVASASHDKSVKIW 784
Score = 41.9 bits (94), Expect = 4e-04
Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = +1
Query: 295 SPDGSLCASGGKDMKAMLWDLNDGKHLHT-LDHNDIITALCFSPNRYWLC-AAFGPSIKI 468
S DG L AS G D K +W++ + T +H IIT + F PN L ++F +IKI
Sbjct: 517 SYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKI 576
Query: 469 WD 474
WD
Sbjct: 577 WD 578
>At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 WD-40
repeats ; similar to LEUNIG (GP:11141605)[Arabidopsis
thaliana]
Length = 787
Score = 58.4 bits (135), Expect = 5e-09
Identities = 37/171 (21%), Positives = 76/171 (44%), Gaps = 3/171 (1%)
Frame = +1
Query: 1 DHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHAN 180
+H + V F ++ Q+ + S DKTIK+W+ + GH+ V + F P
Sbjct: 550 EHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTE 609
Query: 181 PIIVSCGWDRTVKVWHL-TNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 357
++ SC + ++ W + +C + G V P + + ++D+
Sbjct: 610 -LLCSCDSNNDIRFWDINASCVRAV-----KGASTQVRFQPRTGQFLAAASENTVSIFDI 663
Query: 358 -NDGKHLHTL-DHNDIITALCFSPNRYWLCAAFGPSIKIWDLESKEMVEEL 504
N+ K ++ H+ + ++C+SPN + + ++K+W L S + + EL
Sbjct: 664 ENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSEDAVKLWSLSSGDCIHEL 714
Score = 43.2 bits (97), Expect = 2e-04
Identities = 42/152 (27%), Positives = 69/152 (45%), Gaps = 3/152 (1%)
Frame = +1
Query: 25 VAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGW 204
V F Q ++ + + T+ +++ K GHS V V +SPN ++ S
Sbjct: 640 VRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPN--GELVASVSE 697
Query: 205 DRTVKVWHLTNCKLKINHLGHSGY-LNTVTVSPD-GSLCASGGKDMKAMLWDLNDGKHLH 378
D VK+W L++ I+ L +SG ++V P L GG LW+ + K +
Sbjct: 698 D-AVKLWSLSSGDC-IHELSNSGNKFHSVVFHPSYPDLLVIGGYQA-IELWNTMENKCMT 754
Query: 379 TLDHNDIITALCFSPNRYWLC-AAFGPSIKIW 471
H +I+AL SP+ + A+ S+KIW
Sbjct: 755 VAGHECVISALAQSPSTGVVASASHDKSVKIW 786
Score = 41.9 bits (94), Expect = 4e-04
Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = +1
Query: 295 SPDGSLCASGGKDMKAMLWDLNDGKHLHT-LDHNDIITALCFSPNRYWLC-AAFGPSIKI 468
S DG L AS G D K +W++ + T +H IIT + F PN L ++F +IKI
Sbjct: 519 SYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKI 578
Query: 469 WD 474
WD
Sbjct: 579 WD 580
>At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 WD-40
repeats ; similar to LEUNIG (GP:11141605)[Arabidopsis
thaliana]
Length = 787
Score = 58.4 bits (135), Expect = 5e-09
Identities = 37/171 (21%), Positives = 76/171 (44%), Gaps = 3/171 (1%)
Frame = +1
Query: 1 DHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHAN 180
+H + V F ++ Q+ + S DKTIK+W+ + GH+ V + F P
Sbjct: 550 EHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTE 609
Query: 181 PIIVSCGWDRTVKVWHL-TNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 357
++ SC + ++ W + +C + G V P + + ++D+
Sbjct: 610 -LLCSCDSNNDIRFWDINASCVRAV-----KGASTQVRFQPRTGQFLAAASENTVSIFDI 663
Query: 358 -NDGKHLHTL-DHNDIITALCFSPNRYWLCAAFGPSIKIWDLESKEMVEEL 504
N+ K ++ H+ + ++C+SPN + + ++K+W L S + + EL
Sbjct: 664 ENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSEDAVKLWSLSSGDCIHEL 714
Score = 43.2 bits (97), Expect = 2e-04
Identities = 42/152 (27%), Positives = 69/152 (45%), Gaps = 3/152 (1%)
Frame = +1
Query: 25 VAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGW 204
V F Q ++ + + T+ +++ K GHS V V +SPN ++ S
Sbjct: 640 VRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPN--GELVASVSE 697
Query: 205 DRTVKVWHLTNCKLKINHLGHSGY-LNTVTVSPD-GSLCASGGKDMKAMLWDLNDGKHLH 378
D VK+W L++ I+ L +SG ++V P L GG LW+ + K +
Sbjct: 698 D-AVKLWSLSSGDC-IHELSNSGNKFHSVVFHPSYPDLLVIGGYQA-IELWNTMENKCMT 754
Query: 379 TLDHNDIITALCFSPNRYWLC-AAFGPSIKIW 471
H +I+AL SP+ + A+ S+KIW
Sbjct: 755 VAGHECVISALAQSPSTGVVASASHDKSVKIW 786
Score = 41.9 bits (94), Expect = 4e-04
Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = +1
Query: 295 SPDGSLCASGGKDMKAMLWDLNDGKHLHT-LDHNDIITALCFSPNRYWLC-AAFGPSIKI 468
S DG L AS G D K +W++ + T +H IIT + F PN L ++F +IKI
Sbjct: 519 SYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKI 578
Query: 469 WD 474
WD
Sbjct: 579 WD 580
>At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 WD-40
repeats ; similar to LEUNIG (GP:11141605)[Arabidopsis
thaliana]
Length = 787
Score = 58.4 bits (135), Expect = 5e-09
Identities = 37/171 (21%), Positives = 76/171 (44%), Gaps = 3/171 (1%)
Frame = +1
Query: 1 DHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHAN 180
+H + V F ++ Q+ + S DKTIK+W+ + GH+ V + F P
Sbjct: 550 EHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTE 609
Query: 181 PIIVSCGWDRTVKVWHL-TNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 357
++ SC + ++ W + +C + G V P + + ++D+
Sbjct: 610 -LLCSCDSNNDIRFWDINASCVRAV-----KGASTQVRFQPRTGQFLAAASENTVSIFDI 663
Query: 358 -NDGKHLHTL-DHNDIITALCFSPNRYWLCAAFGPSIKIWDLESKEMVEEL 504
N+ K ++ H+ + ++C+SPN + + ++K+W L S + + EL
Sbjct: 664 ENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSEDAVKLWSLSSGDCIHEL 714
Score = 43.2 bits (97), Expect = 2e-04
Identities = 42/152 (27%), Positives = 69/152 (45%), Gaps = 3/152 (1%)
Frame = +1
Query: 25 VAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGW 204
V F Q ++ + + T+ +++ K GHS V V +SPN ++ S
Sbjct: 640 VRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPN--GELVASVSE 697
Query: 205 DRTVKVWHLTNCKLKINHLGHSGY-LNTVTVSPD-GSLCASGGKDMKAMLWDLNDGKHLH 378
D VK+W L++ I+ L +SG ++V P L GG LW+ + K +
Sbjct: 698 D-AVKLWSLSSGDC-IHELSNSGNKFHSVVFHPSYPDLLVIGGYQA-IELWNTMENKCMT 754
Query: 379 TLDHNDIITALCFSPNRYWLC-AAFGPSIKIW 471
H +I+AL SP+ + A+ S+KIW
Sbjct: 755 VAGHECVISALAQSPSTGVVASASHDKSVKIW 786
Score = 41.9 bits (94), Expect = 4e-04
Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = +1
Query: 295 SPDGSLCASGGKDMKAMLWDLNDGKHLHT-LDHNDIITALCFSPNRYWLC-AAFGPSIKI 468
S DG L AS G D K +W++ + T +H IIT + F PN L ++F +IKI
Sbjct: 519 SYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKI 578
Query: 469 WD 474
WD
Sbjct: 579 WD 580
>At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 WD-40
repeats ; similar to LEUNIG (GP:11141605)[Arabidopsis
thaliana]
Length = 787
Score = 58.4 bits (135), Expect = 5e-09
Identities = 37/171 (21%), Positives = 76/171 (44%), Gaps = 3/171 (1%)
Frame = +1
Query: 1 DHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHAN 180
+H + V F ++ Q+ + S DKTIK+W+ + GH+ V + F P
Sbjct: 550 EHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTE 609
Query: 181 PIIVSCGWDRTVKVWHL-TNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 357
++ SC + ++ W + +C + G V P + + ++D+
Sbjct: 610 -LLCSCDSNNDIRFWDINASCVRAV-----KGASTQVRFQPRTGQFLAAASENTVSIFDI 663
Query: 358 -NDGKHLHTL-DHNDIITALCFSPNRYWLCAAFGPSIKIWDLESKEMVEEL 504
N+ K ++ H+ + ++C+SPN + + ++K+W L S + + EL
Sbjct: 664 ENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSEDAVKLWSLSSGDCIHEL 714
Score = 43.2 bits (97), Expect = 2e-04
Identities = 42/152 (27%), Positives = 69/152 (45%), Gaps = 3/152 (1%)
Frame = +1
Query: 25 VAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGW 204
V F Q ++ + + T+ +++ K GHS V V +SPN ++ S
Sbjct: 640 VRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPN--GELVASVSE 697
Query: 205 DRTVKVWHLTNCKLKINHLGHSGY-LNTVTVSPD-GSLCASGGKDMKAMLWDLNDGKHLH 378
D VK+W L++ I+ L +SG ++V P L GG LW+ + K +
Sbjct: 698 D-AVKLWSLSSGDC-IHELSNSGNKFHSVVFHPSYPDLLVIGGYQA-IELWNTMENKCMT 754
Query: 379 TLDHNDIITALCFSPNRYWLC-AAFGPSIKIW 471
H +I+AL SP+ + A+ S+KIW
Sbjct: 755 VAGHECVISALAQSPSTGVVASASHDKSVKIW 786
Score = 41.9 bits (94), Expect = 4e-04
Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = +1
Query: 295 SPDGSLCASGGKDMKAMLWDLNDGKHLHT-LDHNDIITALCFSPNRYWLC-AAFGPSIKI 468
S DG L AS G D K +W++ + T +H IIT + F PN L ++F +IKI
Sbjct: 519 SYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKI 578
Query: 469 WD 474
WD
Sbjct: 579 WD 580
>At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat
family protein contains Pfam profile:PF00560 Leucine
Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic
protein kinase domain; Pfam profile:PF00400 WD domain,
G-beta repeat (7 copies)
Length = 407
Score = 58.4 bits (135), Expect = 5e-09
Identities = 51/218 (23%), Positives = 99/218 (45%), Gaps = 6/218 (2%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT-LAECKYTIQDDG-HSDWVSCVRFSPNHA 177
H +V F+ D + I +GS D ++ +WN E + ++ H++ ++C+ + N +
Sbjct: 196 HNLNVTCGDFTPDGKLICTGSDDASLIVWNPKTCESIHIVKGHPYHTEGLTCLDINSNSS 255
Query: 178 NPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS---LCASGGKDMKAML 348
+ +S D +V + ++ K+ + H+ + V SP + L A+GG D K ++
Sbjct: 256 --LAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSPSSATIPLAATGGMDKKLII 313
Query: 349 WDLNDGKHLHTLDHNDIITALCF-SPNRYWLCAAFGPSIKIWDLESKEMVEELRPEIINQ 525
WDL +H + +T+L + ++Y ++ IWD V
Sbjct: 314 WDLQHSTPRFICEHEEGVTSLTWIGTSKYLATGCANGTVSIWDSLLGNCV---------H 364
Query: 526 TQTSKTDPPQCLSLAWSTDGQTLFAGYSDNTIRVWQVS 639
T D Q +S++ +TD + + DNT RV++ S
Sbjct: 365 TYHGHQDAVQAISVSTNTD--FIVSVSVDNTARVFESS 400
Score = 43.2 bits (97), Expect = 2e-04
Identities = 46/220 (20%), Positives = 93/220 (42%), Gaps = 6/220 (2%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 183
H V +AFS D + + SG D +++++ + + D G + VR+ P
Sbjct: 112 HKDSVSCLAFSYDGQLLASGGLDGVVQIFDASSGTLKCVLD-GPGAGIEWVRWHPR--GH 168
Query: 184 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 363
I+++ D ++ +W+ GH+ + +PDG L +G D ++W+
Sbjct: 169 IVLAGSEDCSLWMWNADKEAYLNMFSGHNLNVTCGDFTPDGKLICTGSDDASLIVWNPKT 228
Query: 364 GKHLHTLD----HNDIITALCFSPN-RYWLCAAFGPSIKIWDLESKEMVEELRPEIINQT 528
+ +H + H + +T L + N + + S+ I ++ + ++V L
Sbjct: 229 CESIHIVKGHPYHTEGLTCLDINSNSSLAISGSKDGSVHIVNIVTGKVVSSL-------- 280
Query: 529 QTSKTDPPQCLSLAWSTDGQTLFA-GYSDNTIRVWQVSIS 645
S TD +C+ + S+ L A G D + +W + S
Sbjct: 281 -NSHTDSVECVKFSPSSATIPLAATGGMDKKLIIWDLQHS 319
Score = 37.5 bits (83), Expect = 0.009
Identities = 24/86 (27%), Positives = 37/86 (43%)
Frame = +1
Query: 130 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 309
GH + + SP A ++ + G D +W + N GH ++ + S DG
Sbjct: 68 GHKGELYALACSPTDAT-LVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLAFSYDGQ 126
Query: 310 LCASGGKDMKAMLWDLNDGKHLHTLD 387
L ASGG D ++D + G LD
Sbjct: 127 LLASGGLDGVVQIFDASSGTLKCVLD 152
>At1g10580.1 68414.m01192 transducin family protein / WD-40 repeat
family protein similar to splicing factor hPRP17
(gi|3283220); contains 7 WD-40 repeats (PF00400);similar
to ESTs emb|F15435 and dbj|AUO62661
Length = 573
Score = 57.6 bits (133), Expect = 8e-09
Identities = 35/129 (27%), Positives = 58/129 (44%), Gaps = 5/129 (3%)
Frame = +1
Query: 130 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNC-KLKINHLGHSGYLNTVTVSPDG 306
GH+ VS +RF P + +++S G D VK+W + N K ++GH+ + + S DG
Sbjct: 280 GHTKGVSAIRFFPKQGH-LLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRDICFSNDG 338
Query: 307 SLCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCFSPN----RYWLCAAFGPSIKIWD 474
S + G D WD G+ + T I + +P+ L I WD
Sbjct: 339 SKFLTAGYDKNIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWD 398
Query: 475 LESKEMVEE 501
+ + E+ +E
Sbjct: 399 INTGEVTQE 407
Score = 47.2 bits (107), Expect = 1e-05
Identities = 33/150 (22%), Positives = 61/150 (40%), Gaps = 3/150 (2%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 183
H K V + FS D + ++ DK IK W+T + G +V V+ +P+
Sbjct: 325 HAKAVRDICFSNDGSKFLTAGYDKNIKYWDTETGQVISTFSTGKIPYV--VKLNPDDDKQ 382
Query: 184 IIVSCGW-DRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLN 360
I+ G D+ + W + ++ + H G +NT+T + + D +W+
Sbjct: 383 NILLAGMSDKKIVQWDINTGEVTQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFG 442
Query: 361 DGKHLHTLD--HNDIITALCFSPNRYWLCA 444
+ + H + ++ PN WL A
Sbjct: 443 IPVVIKYISEPHMHSMPSISVHPNGNWLAA 472
Score = 45.6 bits (103), Expect = 4e-05
Identities = 42/166 (25%), Positives = 66/166 (39%), Gaps = 9/166 (5%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 183
H V ++ F +NR+ V+ S DK++++W + H + + PN
Sbjct: 411 HLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPN--GN 468
Query: 184 IIVSCGWDRTVKVWHLTNCKLKINH----LGH--SGYLNTVTVSPDGSLCASGGKDMKAM 345
+ + D + ++ T + ++N GH +GY V SPDG SG + K
Sbjct: 469 WLAAQSLDNQILIYS-TRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCW 527
Query: 346 LWDLNDGKHLHTLD-HNDIITALCFSPNRYWLCAAFG--PSIKIWD 474
WD K TL HN + + P A G IK WD
Sbjct: 528 FWDWKSCKVFRTLKCHNGVCIGAEWHPLEQSKVATCGWDGLIKYWD 573
>At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 WD
repeats (PF00400); similar to Fzr1 (GI:6463679) {Homo
sapiens}; similar to WD repeat protein Srw1
-Schizosaccharomyces pombe,PID:d1023012
Length = 475
Score = 57.2 bits (132), Expect = 1e-08
Identities = 51/196 (26%), Positives = 85/196 (43%), Gaps = 3/196 (1%)
Frame = +1
Query: 58 SGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTN 237
SGSRDK+I + + + + GH + +++S + N + S G D + VW+ +
Sbjct: 266 SGSRDKSILQRDIRTQEDHVSKLKGHKSEICGLKWSSD--NRELASGGNDNKLFVWNQHS 323
Query: 238 CKLKINHLGHSGYLNTVTVSPDG-SLCASGG--KDMKAMLWDLNDGKHLHTLDHNDIITA 408
+ + H+ + + SP L ASGG D W+ HL+ +D N +
Sbjct: 324 TQPVLRFCEHAAAVKAIAWSPHHFGLLASGGGTADRCIRFWNTTTNTHLNCVDTNSQVCN 383
Query: 409 LCFSPNRYWLCAAFGPSIKIWDLESKEMVEELRPEIINQTQTSKTDPPQCLSLAWSTDGQ 588
L +S N L + G S+ + + +++ T + L LA S DGQ
Sbjct: 384 LVWSKNVNELVSTHG--------YSQNQIIVWKYPTMSKLATLTGHSYRVLYLAVSPDGQ 435
Query: 589 TLFAGYSDNTIRVWQV 636
T+ G D T+R W V
Sbjct: 436 TIVTGAGDETLRFWNV 451
Score = 42.3 bits (95), Expect = 3e-04
Identities = 36/163 (22%), Positives = 72/163 (44%), Gaps = 5/163 (3%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 183
H ++ + +S DNR++ SG D + +WN + ++ H+ V + +SP+H
Sbjct: 291 HKSEICGLKWSSDNRELASGGNDNKLFVWNQ-HSTQPVLRFCEHAAAVKAIAWSPHHFGL 349
Query: 184 IIVSCGW-DRTVKVWHLTNCKLKINHLG-HSGYLNTVTVSPDGSLCASGG-KDMKAMLWD 354
+ G DR ++ W+ T +N + +S N V L ++ G + ++W
Sbjct: 350 LASGGGTADRCIRFWN-TTTNTHLNCVDTNSQVCNLVWSKNVNELVSTHGYSQNQIIVWK 408
Query: 355 LNDGKHLHTL-DHNDIITALCFSPNRYWLCAAFG-PSIKIWDL 477
L TL H+ + L SP+ + G +++ W++
Sbjct: 409 YPTMSKLATLTGHSYRVLYLAVSPDGQTIVTGAGDETLRFWNV 451
Score = 32.7 bits (71), Expect = 0.27
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 111
H+ VL +A S D + IV+G+ D+T++ WN K
Sbjct: 421 HSYRVLYLAVSPDGQTIVTGAGDETLRFWNVFPSPK 456
>At2g46290.1 68415.m05758 eukaryotic translation initiation factor 3
subunit 2, putative / eIF-3 beta, putative / eIF3i,
putative strong similarity to SP|Q38884 Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (eIF3i) (TGF-beta receptor interacting
protein 1) (TRIP-1) {Arabidopsis thaliana}; contains
Pfam PF00400: WD domain, G-beta repeat (5
copies)|19799885|gb|AU231175.1|AU231175
Length = 355
Score = 57.2 bits (132), Expect = 1e-08
Identities = 42/170 (24%), Positives = 73/170 (42%), Gaps = 3/170 (1%)
Frame = +1
Query: 130 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 309
GH ++ +R++ N ++ SC D T VW N + + GHSG + +S D S
Sbjct: 35 GHERPLTFLRYNRN--GDLLFSCAKDHTPTVWFADNGERLGTYRGHSGAVWCCDISRDSS 92
Query: 310 LCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCFSPNRYWLCAAFGPSIKIWD-LESK 486
+G D A LWD+ GK L T ++ FS + + + K
Sbjct: 93 RLITGSADQTAKLWDVKSGKELFTFKFGAPARSVDFSVGDHLAVITTDHFVGTSSAIHVK 152
Query: 487 EMVEELRPEIINQTQTSKT-DPPQCLSLA-WSTDGQTLFAGYSDNTIRVW 630
+ E+ ++ + ++ D + ++ A W QT+ +G D IR+W
Sbjct: 153 RIAEDPEDQVGDSVLVLQSPDGKKKINRAVWGPLNQTIVSGGEDAAIRIW 202
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Frame = +1
Query: 277 LNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD----HNDIITALC-FSPNRYWLC 441
+N P SGG+D +WD GK L D H + IT+LC + + ++L
Sbjct: 178 INRAVWGPLNQTIVSGGEDAAIRIWDAETGKLLKQSDEEVGHKEAITSLCKAADDSHFLT 237
Query: 442 AAFGPSIKIWDLESKEMVE 498
+ + K+WD+ + +++
Sbjct: 238 GSHDKTAKLWDMRTLTLIK 256
Score = 36.7 bits (81), Expect = 0.017
Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 16/126 (12%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN--TLAECK-YTIQDDGHSDWVSCVRFSPNH 174
H + + S+ + D+ ++GS DKT KLW+ TL K YT V+ V SP
Sbjct: 219 HKEAITSLCKAADDSHFLTGSHDKTAKLWDMRTLTLIKTYTTVVP-----VNAVAMSPL- 272
Query: 175 ANPIIVSCGWDRTVKV------------WHLTNCKLKINHL-GHSGYLNTVTVSPDGSLC 315
N +++ G D + ++ T + +I + GH G +N + SPDG
Sbjct: 273 LNHVVLGGGQDASAVTTTDHRAGKFEAKFYDTILQEEIGGVKGHFGPINALAFSPDGKSF 332
Query: 316 ASGGKD 333
+SGG+D
Sbjct: 333 SSGGED 338
Score = 35.9 bits (79), Expect = 0.029
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 3/85 (3%)
Frame = +1
Query: 178 NPIIVSCGWDRTVKVWHLTNCKL---KINHLGHSGYLNTVTVSPDGSLCASGGKDMKAML 348
N IVS G D +++W KL +GH + ++ + D S +G D A L
Sbjct: 187 NQTIVSGGEDAAIRIWDAETGKLLKQSDEEVGHKEAITSLCKAADDSHFLTGSHDKTAKL 246
Query: 349 WDLNDGKHLHTLDHNDIITALCFSP 423
WD+ + T + A+ SP
Sbjct: 247 WDMRTLTLIKTYTTVVPVNAVAMSP 271
Score = 33.1 bits (72), Expect = 0.20
Identities = 28/118 (23%), Positives = 55/118 (46%), Gaps = 3/118 (2%)
Frame = +1
Query: 1 DHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN--TLAECKYTIQDDGHSDWVSCVRFSPNH 174
D K + + N+ IVSG D I++W+ T K + ++ GH + ++ + + +
Sbjct: 173 DGKKKINRAVWGPLNQTIVSGGEDAAIRIWDAETGKLLKQSDEEVGHKEAITSLCKAADD 232
Query: 175 ANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAM 345
++ ++ D+T K+W + L I +N V +SP + GG+D A+
Sbjct: 233 SH--FLTGSHDKTAKLWDMRTLTL-IKTYTTVVPVNAVAMSPLLNHVVLGGGQDASAV 287
>At2g22040.1 68415.m02617 transducin family protein / WD-40 repeat
family protein similar to Pop3 (GI:3434986)
[Schizosaccharomyces pombe]; contains Pfam PF00400: WD
domain, G-beta repeat (6 copies, 2 weak);
Length = 312
Score = 57.2 bits (132), Expect = 1e-08
Identities = 56/225 (24%), Positives = 103/225 (45%), Gaps = 14/225 (6%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDDGHSDWVSCVRFSPNHAN 180
HTK+V++V F + SGS D ++K+W+ + EC+ + V+ V PN
Sbjct: 83 HTKNVMAVGFQYTGHMMYSGSEDGSVKIWDLRVRECQREFRSVSP---VNTVVLHPNQTE 139
Query: 181 PIIVSCGWDRTVKVW----HLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAML 348
++S + ++VW L +C+L + +G + ++TV DG++ + +
Sbjct: 140 --LISGDQNGNIRVWDLRADLCSCEL-VPEVGTP--IRSLTVMWDGTMVVAANDRGTCYV 194
Query: 349 W-------DLNDGKHLHTLD-HNDIITALCFSP-NRYWLCAAFGPSIKIWDLESKEMVEE 501
W + + + LH L HN I SP N+Y A+ ++KIW+L+ ++
Sbjct: 195 WRSLCERQTMTEFEPLHKLQAHNSHILKCLLSPGNKYLATASSDKTVKIWNLDGFKL--- 251
Query: 502 LRPEIINQTQTSKTDPPQCLSLAWSTDGQTLFAGYSDNTIRVWQV 636
+++ + D C +S DG+ L SD T R+W +
Sbjct: 252 --EKVLTGHERWVWD---C---DFSMDGEYLVTASSDTTARLWSM 288
Score = 45.2 bits (102), Expect = 5e-05
Identities = 30/124 (24%), Positives = 52/124 (41%), Gaps = 6/124 (4%)
Frame = +1
Query: 16 VLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDD------GHSDWVSCVRFSPNHA 177
+ S+ D +V+ + T +W +L E + + + H+ + SP
Sbjct: 171 IRSLTVMWDGTMVVAANDRGTCYVWRSLCERQTMTEFEPLHKLQAHNSHILKCLLSPG-- 228
Query: 178 NPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 357
N + + D+TVK+W+L KL+ GH ++ S DG + D A LW +
Sbjct: 229 NKYLATASSDKTVKIWNLDGFKLEKVLTGHERWVWDCDFSMDGEYLVTASSDTTARLWSM 288
Query: 358 NDGK 369
GK
Sbjct: 289 RAGK 292
Score = 40.3 bits (90), Expect = 0.001
Identities = 44/200 (22%), Positives = 84/200 (42%), Gaps = 6/200 (3%)
Frame = +1
Query: 52 IVSGSRDKTIKLWNT-LAECKYTIQ-DDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 225
+ + S D+TI+LW C ++ + D H V+ + +P ++ +C + ++++
Sbjct: 13 LATASHDQTIRLWQARTGRCYFSFRYPDLH---VNRLELTPEKGK-LVAAC--NPHIRLF 66
Query: 226 HLTNCKLKI---NHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHND 396
L + I N + H+ + V G + SG +D +WDL +
Sbjct: 67 DLRSYNPHIPVRNFVSHTKNVMAVGFQYTGHMMYSGSEDGSVKIWDLRVRECQREFRSVS 126
Query: 397 IITALCFSPNRYWLCAAF-GPSIKIWDLESKEMVEELRPEIINQTQTSKTDPPQCLSLAW 573
+ + PN+ L + +I++WDL + EL PE+ P + L++ W
Sbjct: 127 PVNTVVLHPNQTELISGDQNGNIRVWDLRADLCSCELVPEV--------GTPIRSLTVMW 178
Query: 574 STDGQTLFAGYSDNTIRVWQ 633
DG + A T VW+
Sbjct: 179 --DGTMVVAANDRGTCYVWR 196
Score = 30.7 bits (66), Expect = 1.1
Identities = 34/163 (20%), Positives = 69/163 (42%), Gaps = 6/163 (3%)
Frame = +1
Query: 166 PNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPD-GSLCASGGKDMKA 342
P+ + + + D+T+++W + + ++N + ++P+ G L A+ ++
Sbjct: 6 PDDSPVYLATASHDQTIRLWQARTGRCYFSFRYPDLHVNRLELTPEKGKLVAACNPHIR- 64
Query: 343 MLWDLND-GKHL---HTLDHNDIITALCFSPNRYWLCAAFGP-SIKIWDLESKEMVEELR 507
L+DL H+ + + H + A+ F + + + S+KIWDL +E E R
Sbjct: 65 -LFDLRSYNPHIPVRNFVSHTKNVMAVGFQYTGHMMYSGSEDGSVKIWDLRVRECQREFR 123
Query: 508 PEIINQTQTSKTDPPQCLSLAWSTDGQTLFAGYSDNTIRVWQV 636
++ T P Q L +G + IRVW +
Sbjct: 124 S--VSPVNTVVLHPNQ----------TELISGDQNGNIRVWDL 154
>At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 347
Score = 56.8 bits (131), Expect = 1e-08
Identities = 60/222 (27%), Positives = 102/222 (45%), Gaps = 17/222 (7%)
Frame = +1
Query: 16 VLSVAFSVDNRQIVSGSRDKTIKLWN--TLAECKYTIQDD----GHSDWVSCVRFSPNHA 177
V++ AFS + + + G D +++ + A+ T+ GH +VSC ++ PN
Sbjct: 110 VMTCAFSPNGQSVACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNED 169
Query: 178 NPIIVSCGWDRTVKVWHLTNCKLKINHLG---HSGYL-NTVTVSPDGS---LCASGGKDM 336
+I S G D+T +W +T LK + G SG+ + ++VS GS SG D
Sbjct: 170 AHLITSSG-DQTCILWDVTT-GLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDS 227
Query: 337 KAMLWDLNDGKH-LHTLD-HNDIITALCFSPNRYWL-CAAFGPSIKIWDLESKEMVEELR 507
A LWD + T H + + F P+ Y + + +++D+ + ++ +
Sbjct: 228 TARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQ 287
Query: 508 PEIINQTQTSKTDPPQCLSLAWSTDGQTLFAGY-SDNTIRVW 630
P + P S+A+S G+ LFAGY S+NT VW
Sbjct: 288 PH-----GDGENGP--VTSIAFSVSGRLLFAGYASNNTCYVW 322
Score = 50.4 bits (115), Expect = 1e-06
Identities = 41/157 (26%), Positives = 67/157 (42%), Gaps = 12/157 (7%)
Frame = +1
Query: 40 DNRQIVSGSRDKTIKLWNTLAECKYTIQ----DDGHSDWVSCVRFSPNHANPIIVSCGWD 207
++ +++ S D+T LW+ K ++ GH+ V V S ++ N I S D
Sbjct: 168 EDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFI-SGSCD 226
Query: 208 RTVKVWHLTNCKLKINHL-GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHL--- 375
T ++W + GH G +NTV PDG +G D L+D+ G L
Sbjct: 227 STARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVY 286
Query: 376 --HTLDHNDIITALCFSPNRYWLCAAFGP--SIKIWD 474
H N +T++ FS + L A + + +WD
Sbjct: 287 QPHGDGENGPVTSIAFSVSGRLLFAGYASNNTCYVWD 323
Score = 46.4 bits (105), Expect = 2e-05
Identities = 40/131 (30%), Positives = 61/131 (46%), Gaps = 10/131 (7%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 183
HT V S+ ++ + +IVS S+D + +WN L K T WV FSPN +
Sbjct: 64 HTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQK-THAIKLPCAWVMTCAFSPNGQS- 121
Query: 184 IIVSC-GWDRTVKVWHLTNCKLK-----INHL--GHSGYLNTVTVSP--DGSLCASGGKD 333
V+C G D ++ L++ K ++ + GH GY++ P D L S G D
Sbjct: 122 --VACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSG-D 178
Query: 334 MKAMLWDLNDG 366
+LWD+ G
Sbjct: 179 QTCILWDVTTG 189
Score = 44.4 bits (100), Expect = 8e-05
Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 6/123 (4%)
Frame = +1
Query: 4 HTKDVLSVAFSVDN-RQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHAN 180
HT DVLSV+ S N +SGS D T +LW+T A + GH V+ V+F P+
Sbjct: 203 HTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYR 262
Query: 181 PIIVSCGWDRTVKVWHL-TNCKLKI---NHLGHSGYLNTVTVSPDGSLCASG-GKDMKAM 345
+ D T +++ + T +L++ + G +G + ++ S G L +G +
Sbjct: 263 --FGTGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIAFSVSGRLLFAGYASNNTCY 320
Query: 346 LWD 354
+WD
Sbjct: 321 VWD 323
Score = 29.1 bits (62), Expect = 3.3
Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 2/128 (1%)
Frame = +1
Query: 262 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALC-FSPN-RYW 435
GH+G + ++ +P+ + S +D + ++W+ + H + C FSPN +
Sbjct: 63 GHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQSV 122
Query: 436 LCAAFGPSIKIWDLESKEMVEELRPEIINQTQTSKTDPPQCLSLAWSTDGQTLFAGYSDN 615
C I+ L S + P +++ T C + D L D
Sbjct: 123 ACGGLDSVCSIFSLSSTADKDGTVP--VSRMLTGHRGYVSCCQYVPNEDAH-LITSSGDQ 179
Query: 616 TIRVWQVS 639
T +W V+
Sbjct: 180 TCILWDVT 187
>At2g47990.1 68415.m06006 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 5 WD-40 repeats (PF00400); similar to beta
transducin-like protein HET-E2C*4
(GP:17225206)[Podospora anserina]
Length = 530
Score = 56.4 bits (130), Expect = 2e-08
Identities = 48/146 (32%), Positives = 73/146 (50%), Gaps = 10/146 (6%)
Frame = +1
Query: 4 HTKDVLSVAFSV-DNRQIVSGSRDKTIKLWNTLAECKYTIQDD--GHSDWVSCVRFSPNH 174
H+ V + V D +VSG D +K W+ T+ D GH D+V C SP +
Sbjct: 134 HSAPARFVKYPVQDKLHLVSGGDDGVVKYWDVAGA---TVISDLLGHKDYVRCGDCSPVN 190
Query: 175 ANPIIVSCGWDRTVKVW----HLTNCKLKINHLGHSGYLNTVTVSPDGSLCA-SGGKDMK 339
+ ++V+ +D TVKVW H +N +IN H + V P G L A +GG +K
Sbjct: 191 -DSMLVTGSYDHTVKVWDARVHTSNWIAEIN---HGLPVEDVVYLPSGGLIATAGGNSVK 246
Query: 340 AMLWDL-NDGKHLHTLD-HNDIITAL 411
+WDL GK + +++ HN +T+L
Sbjct: 247 --VWDLIGGGKMVCSMESHNKTVTSL 270
Score = 47.6 bits (108), Expect = 9e-06
Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Frame = +1
Query: 187 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAMLWD--L 357
+VS G D VK W + + + LGH Y+ SP + S+ +G D +WD +
Sbjct: 151 LVSGGDDGVVKYWDVAGATVISDLLGHKDYVRCGDCSPVNDSMLVTGSYDHTVKVWDARV 210
Query: 358 NDGKHLHTLDHNDIITALCFSPNRYWLCAAFGPSIKIWDL 477
+ + ++H + + + P+ + A G S+K+WDL
Sbjct: 211 HTSNWIAEINHGLPVEDVVYLPSGGLIATAGGNSVKVWDL 250
>At3g15980.3 68416.m02022 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 56.0 bits (129), Expect = 3e-08
Identities = 51/216 (23%), Positives = 90/216 (41%), Gaps = 8/216 (3%)
Frame = +1
Query: 16 VLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVS 195
V S F + +V+G+ D I+++N K + + HSD++ CV P P ++S
Sbjct: 60 VRSAKFIPRKQWVVAGADDMYIRVYNYNTMDKVKVFE-AHSDYIRCVAVHP--TLPYVLS 116
Query: 196 CGWDRTVKVWHLTN---CKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAMLWDLND 363
D +K+W N C GHS Y+ V +P D + AS D +W+L
Sbjct: 117 SSDDMLIKLWDWENGWACTQIFE--GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGS 174
Query: 364 GKHLHTLD-HNDIITALCF---SPNRYWLCAAFGPSIKIWDLESKEMVEELRPEIINQTQ 531
TLD H + + + Y + + + K+WD ++K V+ L N +
Sbjct: 175 PDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVS- 233
Query: 532 TSKTDPPQCLSLAWSTDGQTLFAGYSDNTIRVWQVS 639
++ + + + G D T+R+W +
Sbjct: 234 ----------AVCFHPELPIIITGSEDGTVRIWHAT 259
Score = 54.4 bits (125), Expect = 8e-08
Identities = 34/131 (25%), Positives = 60/131 (45%), Gaps = 2/131 (1%)
Frame = +1
Query: 4 HTKDVLSVAFSV-DNRQIVSGSRDKTIKLWNTLA-ECKYTIQDDGHSDWVSCVRFSPNHA 177
H+ V+ V F+ D S S D+TIK+WN + + +T+ D H V+CV +
Sbjct: 141 HSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL--DAHQKGVNCVDYFTGGD 198
Query: 178 NPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 357
P +++ D T KVW GH+ ++ V P+ + +G +D +W
Sbjct: 199 KPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHA 258
Query: 358 NDGKHLHTLDH 390
+ +TL++
Sbjct: 259 TTYRLENTLNY 269
>At3g15980.2 68416.m02021 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 56.0 bits (129), Expect = 3e-08
Identities = 51/216 (23%), Positives = 90/216 (41%), Gaps = 8/216 (3%)
Frame = +1
Query: 16 VLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVS 195
V S F + +V+G+ D I+++N K + + HSD++ CV P P ++S
Sbjct: 60 VRSAKFIPRKQWVVAGADDMYIRVYNYNTMDKVKVFE-AHSDYIRCVAVHP--TLPYVLS 116
Query: 196 CGWDRTVKVWHLTN---CKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAMLWDLND 363
D +K+W N C GHS Y+ V +P D + AS D +W+L
Sbjct: 117 SSDDMLIKLWDWENGWACTQIFE--GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGS 174
Query: 364 GKHLHTLD-HNDIITALCF---SPNRYWLCAAFGPSIKIWDLESKEMVEELRPEIINQTQ 531
TLD H + + + Y + + + K+WD ++K V+ L N +
Sbjct: 175 PDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVS- 233
Query: 532 TSKTDPPQCLSLAWSTDGQTLFAGYSDNTIRVWQVS 639
++ + + + G D T+R+W +
Sbjct: 234 ----------AVCFHPELPIIITGSEDGTVRIWHAT 259
Score = 54.4 bits (125), Expect = 8e-08
Identities = 34/131 (25%), Positives = 60/131 (45%), Gaps = 2/131 (1%)
Frame = +1
Query: 4 HTKDVLSVAFSV-DNRQIVSGSRDKTIKLWNTLA-ECKYTIQDDGHSDWVSCVRFSPNHA 177
H+ V+ V F+ D S S D+TIK+WN + + +T+ D H V+CV +
Sbjct: 141 HSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL--DAHQKGVNCVDYFTGGD 198
Query: 178 NPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 357
P +++ D T KVW GH+ ++ V P+ + +G +D +W
Sbjct: 199 KPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHA 258
Query: 358 NDGKHLHTLDH 390
+ +TL++
Sbjct: 259 TTYRLENTLNY 269
>At3g15980.1 68416.m02020 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 909
Score = 56.0 bits (129), Expect = 3e-08
Identities = 51/216 (23%), Positives = 90/216 (41%), Gaps = 8/216 (3%)
Frame = +1
Query: 16 VLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVS 195
V S F + +V+G+ D I+++N K + + HSD++ CV P P ++S
Sbjct: 60 VRSAKFIPRKQWVVAGADDMYIRVYNYNTMDKVKVFE-AHSDYIRCVAVHP--TLPYVLS 116
Query: 196 CGWDRTVKVWHLTN---CKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAMLWDLND 363
D +K+W N C GHS Y+ V +P D + AS D +W+L
Sbjct: 117 SSDDMLIKLWDWENGWACTQIFE--GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGS 174
Query: 364 GKHLHTLD-HNDIITALCF---SPNRYWLCAAFGPSIKIWDLESKEMVEELRPEIINQTQ 531
TLD H + + + Y + + + K+WD ++K V+ L N +
Sbjct: 175 PDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVS- 233
Query: 532 TSKTDPPQCLSLAWSTDGQTLFAGYSDNTIRVWQVS 639
++ + + + G D T+R+W +
Sbjct: 234 ----------AVCFHPELPIIITGSEDGTVRIWHAT 259
Score = 54.4 bits (125), Expect = 8e-08
Identities = 34/131 (25%), Positives = 60/131 (45%), Gaps = 2/131 (1%)
Frame = +1
Query: 4 HTKDVLSVAFSV-DNRQIVSGSRDKTIKLWNTLA-ECKYTIQDDGHSDWVSCVRFSPNHA 177
H+ V+ V F+ D S S D+TIK+WN + + +T+ D H V+CV +
Sbjct: 141 HSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL--DAHQKGVNCVDYFTGGD 198
Query: 178 NPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 357
P +++ D T KVW GH+ ++ V P+ + +G +D +W
Sbjct: 199 KPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHA 258
Query: 358 NDGKHLHTLDH 390
+ +TL++
Sbjct: 259 TTYRLENTLNY 269
>At2g05720.1 68415.m00613 transducin family protein / WD-40 repeat
family protein Similar to U4/U6 small nuclear
ribonucleoprotein hPrp4 (gi:2708305)[Homo sapiens];
contains 4 WD-40 repeats
Length = 276
Score = 56.0 bits (129), Expect = 3e-08
Identities = 46/171 (26%), Positives = 77/171 (45%), Gaps = 4/171 (2%)
Frame = +1
Query: 4 HTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHAN 180
H + V V FS VD+ + + S D+T K+W T T +
Sbjct: 105 HKEHVTDVVFSSVDDECLATASTDRTEKIWKTDGTLLQTFK------------------- 145
Query: 181 PIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLN 360
S G+D +VW L + + GH + +V SP+G ASGG+D + +WDL
Sbjct: 146 ---ASSGFDSLARVWDLRTARNILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLR 202
Query: 361 DGKHLHTLD-HNDIITALCFSP-NRYWLC-AAFGPSIKIWDLESKEMVEEL 504
K L+ + H ++++ + + P RY+L A+ ++ IW +V+ L
Sbjct: 203 MRKLLYIIPAHVNLVSQVKYEPQERYFLATASHDMNVNIWSGRDFSLVKSL 253
Score = 44.0 bits (99), Expect = 1e-04
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 1/103 (0%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDDGHSDWVSCVRFSPNHAN 180
H K VLSV FS + + SG D ++W+ + + Y I H + VS V++ P
Sbjct: 171 HIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRMRKLLYII--PAHVNLVSQVKYEPQE-R 227
Query: 181 PIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 309
+ + D V +W + L + +GH + ++ ++ D S
Sbjct: 228 YFLATASHDMNVNIWSGRDFSLVKSLVGHESKVASLDIAVDSS 270
>At1g47610.1 68414.m05288 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein (GI:2739374)
[Arabidopsis thaliana]
Length = 351
Score = 56.0 bits (129), Expect = 3e-08
Identities = 45/174 (25%), Positives = 84/174 (48%), Gaps = 7/174 (4%)
Frame = +1
Query: 133 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSL 312
HSD VSC+ + + ++ S WDRTVKVW + + K + H +N+VT + SL
Sbjct: 134 HSDAVSCLSLAEDQG--LLYSASWDRTVKVWRIHDLKCIESIKAHDDAVNSVTTAE--SL 189
Query: 313 CASGGKDMKAMLW--DLNDGKHLHT-----LDHNDIITALCFSPNRYWLCAAFGPSIKIW 471
+G D +W ++ + H+ L +TAL S + ++ G ++ W
Sbjct: 190 VFTGSADGTVKVWKREIRGKRTAHSLFQTLLKQESAVTALVTSHMAVYSGSSDG-AVNFW 248
Query: 472 DLESKEMVEELRPEIINQTQTSKTDPPQCLSLAWSTDGQTLFAGYSDNTIRVWQ 633
++ K++++ E+ + + + C++ A G+ LF+G +D I VW+
Sbjct: 249 EMGDKKLLKHC--EVFKKHRLAVL----CIAAA----GKLLFSGAADKKICVWR 292
Score = 40.3 bits (90), Expect = 0.001
Identities = 49/227 (21%), Positives = 84/227 (37%), Gaps = 16/227 (7%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 183
H+ V ++ + D + S S D+T+K+W + + K H D V+ V A
Sbjct: 134 HSDAVSCLSLAEDQGLLYSASWDRTVKVWR-IHDLKCIESIKAHDDAVNSV----TTAES 188
Query: 184 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYL---NTVTVSPDGSLCA-SGGKDMKAMLW 351
++ + D TVKVW + H L + VT + SG D W
Sbjct: 189 LVFTGSADGTVKVWKREIRGKRTAHSLFQTLLKQESAVTALVTSHMAVYSGSSDGAVNFW 248
Query: 352 DLNDG---KHLHTLDHNDIITALCFSPNRYWLCAAFGPSIKIWDLESKEMVEELRPEIIN 522
++ D KH + + + + A I +W E K
Sbjct: 249 EMGDKKLLKHCEVFKKHRLAVLCIAAAGKLLFSGAADKKICVWRREGK-------VHTCV 301
Query: 523 QTQTSKTDPPQCLSLAWSTDGQ---------TLFAGYSDNTIRVWQV 636
T T P +CL++ + G+ L++G D +++VW+V
Sbjct: 302 SVLTGHTGPVKCLAVVEPSGGEEEDGGDGRLVLYSGSLDKSVKVWRV 348
>At5g64730.1 68418.m08140 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Will die slowly protein (SP:Q9V3J8) [Fruit
fly] {Drosophila m.]
Length = 299
Score = 55.6 bits (128), Expect = 3e-08
Identities = 50/208 (24%), Positives = 83/208 (39%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 183
H VL+ F+ D ++ +D+TI+LWN H V V + ++A
Sbjct: 17 HEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKS-HGREVRDVHVTSDNAK- 74
Query: 184 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 363
SCG DR V W ++ ++ GH G +N V + S+ S G D +WD
Sbjct: 75 -FCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRVWDCRS 133
Query: 364 GKHLHTLDHNDIITALCFSPNRYWLCAAFGPSIKIWDLESKEMVEELRPEIINQTQTSKT 543
H+++ II + + + +I V I + +
Sbjct: 134 ----HSVEPVQIIDTFLDT-----VMSVVLTKTEIIGGSVDGTVRTFDMRIGREMSDNLG 184
Query: 544 DPPQCLSLAWSTDGQTLFAGYSDNTIRV 627
P C+S+ S DG + AG D+T+R+
Sbjct: 185 QPVNCISI--SNDGNCVLAGCLDSTLRL 210
Score = 50.8 bits (116), Expect = 9e-07
Identities = 32/120 (26%), Positives = 56/120 (46%), Gaps = 2/120 (1%)
Frame = +1
Query: 130 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 309
GH V RF N ++CG DRT+++W+ L + H + V V+ D +
Sbjct: 16 GHEGAVLAARF--NGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHVTSDNA 73
Query: 310 LCASGGKDMKAMLWDLNDGKHLHTL-DHNDIITALCFS-PNRYWLCAAFGPSIKIWDLES 483
S G D + WD++ G+ + H+ + A+ F+ + + A F S+++WD S
Sbjct: 74 KFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRVWDCRS 133
>At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to fizzy-related
protein (GI:5813825) Drosophila melanogaster,
PID:g2326419;
Length = 518
Score = 55.6 bits (128), Expect = 3e-08
Identities = 54/199 (27%), Positives = 86/199 (43%), Gaps = 6/199 (3%)
Frame = +1
Query: 58 SGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTN 237
SGSRDK+I + + + + GH V +++S + N + S G D + VW+ +
Sbjct: 309 SGSRDKSILQRDIRCQEDHVSKLAGHKSEVCGLKWS--YDNRELASGGNDNRLFVWNQHS 366
Query: 238 CKLKINHLGHSGYLNTVTVSPD--GSLCASGGK-DMKAMLWDLNDGKHLHTLDHNDIITA 408
+ + + H+ + + SP G L + GG D W+ HL ++D +
Sbjct: 367 TQPVLKYSEHTAAVKAIAWSPHVHGLLASGGGTADRCIRFWNTTTNTHLSSIDTCSQVCN 426
Query: 409 LCFSPNRYWLCAAFGPS---IKIWDLESKEMVEELRPEIINQTQTSKTDPPQCLSLAWST 579
L +S N L + G S I +W + + L T T + L LA S
Sbjct: 427 LAWSKNVNELVSTHGYSQNQIIVWKYPTMSKIATL---------TGHTY--RVLYLAVSP 475
Query: 580 DGQTLFAGYSDNTIRVWQV 636
DGQT+ G D T+R W V
Sbjct: 476 DGQTIVTGAGDETLRFWNV 494
Score = 41.9 bits (94), Expect = 4e-04
Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 183
H +V + +S DNR++ SG D + +WN + ++ H+ V + +SP H +
Sbjct: 334 HKSEVCGLKWSYDNRELASGGNDNRLFVWNQ-HSTQPVLKYSEHTAAVKAIAWSP-HVHG 391
Query: 184 IIVSCGW--DRTVKVWHLT 234
++ S G DR ++ W+ T
Sbjct: 392 LLASGGGTADRCIRFWNTT 410
Score = 34.3 bits (75), Expect = 0.088
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 111
HT VL +A S D + IV+G+ D+T++ WN K
Sbjct: 464 HTYRVLYLAVSPDGQTIVTGAGDETLRFWNVFPSPK 499
>At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 654
Score = 55.2 bits (127), Expect = 4e-08
Identities = 50/219 (22%), Positives = 98/219 (44%), Gaps = 10/219 (4%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA-ECKYTIQDDGHSDWVSCVRFSPNHAN 180
HT +VL +++S DN ++S S DKT++LW + +C H+ +V+ V+F+P + N
Sbjct: 327 HTGEVLDISWSKDN-YLLSASMDKTVRLWKVGSNDCLGVF---AHNSYVTSVQFNPVNEN 382
Query: 181 PIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS---LCASGGK----DMK 339
+S D V++W+++ C + ++ ++ V PDG + + G +M
Sbjct: 383 -YFMSGSIDGKVRIWNISGCSV-VDWADLKDIISAVCYRPDGQGGIIGSLNGSCRFFNMS 440
Query: 340 AMLWDLNDGKHLHT--LDHNDIITALCFSPNRYWLCAAFGPSIKIWDLESKEMVEELRPE 513
+L+ HLH N IT F P K+ L+ +V + +
Sbjct: 441 GEFLELDSQIHLHNKKKSSNKRITGFQFLPQEPTKVLVVSADSKVRILQGNNVVRKYKGV 500
Query: 514 IINQTQTSKTDPPQCLSLAWSTDGQTLFAGYSDNTIRVW 630
++ T S + ++DG+ + + D+ + +W
Sbjct: 501 CKTRSLT---------SASLTSDGKHIVSACEDSNVYIW 530
Score = 43.2 bits (97), Expect = 2e-04
Identities = 25/100 (25%), Positives = 53/100 (53%), Gaps = 1/100 (1%)
Frame = +1
Query: 130 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DG 306
GH+ V + +S ++ ++S D+TV++W + + + H+ Y+ +V +P +
Sbjct: 326 GHTGEVLDISWSKDN---YLLSASMDKTVRLWKVGSNDC-LGVFAHNSYVTSVQFNPVNE 381
Query: 307 SLCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCFSPN 426
+ SG D K +W+++ + D DII+A+C+ P+
Sbjct: 382 NYFMSGSIDGKVRIWNISGCSVVDWADLKDIISAVCYRPD 421
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +1
Query: 484 KEMVEELRPEIINQTQTSKTDPPQCLSLAWSTDGQTLFAGYSDNTIRVWQV 636
K+ +EL + Q+Q K L++ +S DG+ L + D +RVW+V
Sbjct: 202 KKQAKEL--SALYQSQDIKAHDGAILAMKFSNDGKFLASSGEDGIVRVWKV 250
>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (10 copies); similar to WD-repeat protein
3 (SP:Q9UNX4) [Homo sapiens]
Length = 955
Score = 55.2 bits (127), Expect = 4e-08
Identities = 41/196 (20%), Positives = 89/196 (45%), Gaps = 4/196 (2%)
Frame = +1
Query: 22 SVAFSVDNRQIVSGSRDKTIKLWNTL-AECKYTIQDDGHSDWVSCVRFSPNHANPIIVSC 198
++A+ + +++ + +K + +W+ C T+ S S + +V+
Sbjct: 23 NIAYDSTGKYVLAPALEK-VGIWHVRQGVCSKTLTPSSSRGGPSLAVTSIASSASSLVAV 81
Query: 199 GW-DRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHL 375
G+ D ++++W ++N H G + + + GS+ ASG KD +LWD+ L
Sbjct: 82 GYADGSIRIWDTEKGTCEVNFNSHKGAVTALRYNKVGSMLASGSKDNDIILWDVVGESGL 141
Query: 376 HTL-DHNDIITALCF-SPNRYWLCAAFGPSIKIWDLESKEMVEELRPEIINQTQTSKTDP 549
L H D +T L F + + ++ +++WDLE++ ++ + ++ + TDP
Sbjct: 142 FRLRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLETQHCMQIVSGH-HSEVWSVDTDP 200
Query: 550 PQCLSLAWSTDGQTLF 597
+ + S D + F
Sbjct: 201 EERYVVTGSADQELRF 216
Score = 54.8 bits (126), Expect = 6e-08
Identities = 35/121 (28%), Positives = 53/121 (43%), Gaps = 1/121 (0%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDDGHSDWVSCVRFSPNHAN 180
H V+ + S D IV+GS+DK +K+W +C +I H D V V+F N
Sbjct: 581 HKLPVMCIDISSDGELIVTGSQDKNLKIWGLDFGDCHKSI--FAHGDSVMGVKFVRN--T 636
Query: 181 PIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLN 360
+ S G DR VK W + + GH + + +S G +G D WD +
Sbjct: 637 HYLFSIGKDRLVKYWDADKFEHLLTLEGHHAEIWCLAISNRGDFLVTGSHDRSMRRWDRS 696
Query: 361 D 363
+
Sbjct: 697 E 697
Score = 52.4 bits (120), Expect = 3e-07
Identities = 49/182 (26%), Positives = 82/182 (45%), Gaps = 4/182 (2%)
Frame = +1
Query: 13 DVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIV 192
DVL+VA S D + I D T+K++ + K+ + GH V C+ S + +IV
Sbjct: 542 DVLAVAISPDAKHIAVALLDSTVKVF-YMDSLKFYLSLYGHKLPVMCIDISSD--GELIV 598
Query: 193 SCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKH 372
+ D+ +K+W L + H + V + S GKD WD + +H
Sbjct: 599 TGSQDKNLKIWGLDFGDCHKSIFAHGDSVMGVKFVRNTHYLFSIGKDRLVKYWDADKFEH 658
Query: 373 LHTLD-HNDIITALCFSPNR--YWLCAAFGPSIKIWD-LESKEMVEELRPEIINQTQTSK 540
L TL+ H+ I L S NR + + + S++ WD E +EE + + + + S+
Sbjct: 659 LLTLEGHHAEIWCLAIS-NRGDFLVTGSHDRSMRRWDRSEEPFFLEEEKEKRLEELFESE 717
Query: 541 TD 546
D
Sbjct: 718 ID 719
Score = 51.6 bits (118), Expect = 5e-07
Identities = 46/170 (27%), Positives = 73/170 (42%), Gaps = 2/170 (1%)
Frame = +1
Query: 136 SDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLC 315
+D V V SP+ A I V+ D TVKV+++ + K ++ GH + + +S DG L
Sbjct: 540 NDDVLAVAISPD-AKHIAVAL-LDSTVKVFYMDSLKFYLSLYGHKLPVMCIDISSDGELI 597
Query: 316 ASGGKDMKAMLWDLNDGK-HLHTLDHNDIITALCFSPNRYWLCA-AFGPSIKIWDLESKE 489
+G +D +W L+ G H H D + + F N ++L + +K WD + E
Sbjct: 598 VTGSQDKNLKIWGLDFGDCHKSIFAHGDSVMGVKFVRNTHYLFSIGKDRLVKYWDADKFE 657
Query: 490 MVEELRPEIINQTQTSKTDPPQCLSLAWSTDGQTLFAGYSDNTIRVWQVS 639
T + + LA S G L G D ++R W S
Sbjct: 658 -----------HLLTLEGHHAEIWCLAISNRGDFLVTGSHDRSMRRWDRS 696
Score = 41.9 bits (94), Expect = 4e-04
Identities = 24/86 (27%), Positives = 42/86 (48%)
Frame = +1
Query: 250 INHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCFSPNR 429
I H GH + +VT+S D +L S + +W+ + G L T+D + +L N+
Sbjct: 400 IEHQGHRSDVRSVTLSEDNTLLMSTSHS-EVKIWNPSTGSCLRTIDSGYGLCSLIVPQNK 458
Query: 430 YWLCAAFGPSIKIWDLESKEMVEELR 507
Y + ++I D+ S VEE++
Sbjct: 459 YGIVGTKSGVLEIIDIGSATKVEEVK 484
Score = 41.1 bits (92), Expect = 8e-04
Identities = 50/225 (22%), Positives = 95/225 (42%), Gaps = 16/225 (7%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDDGHSDWVSCVRFSPNHAN 180
H DV SV S DN ++S S + +K+WN + C TI D G+ C P +
Sbjct: 405 HRSDVRSVTLSEDNTLLMSTSHSE-VKIWNPSTGSCLRTI-DSGYG---LCSLIVPQNKY 459
Query: 181 PII-VSCGWDRTVKVWHLTNCKLKINHL-GHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 354
I+ G + + T K+ + H G + ++T P+ S + D + W+
Sbjct: 460 GIVGTKSGVLEIIDIGSAT----KVEEVKAHGGTIWSITPIPNDSGFVTVSADHEVKFWE 515
Query: 355 LN----DGK--------HLHTLDHNDIITALCFSPN-RYWLCAAFGPSIKIWDLESKEMV 495
GK ++ ++ ND + A+ SP+ ++ A ++K++ ++S +
Sbjct: 516 YQVKQKSGKATKKLTVSNVKSMKMNDDVLAVAISPDAKHIAVALLDSTVKVFYMDSLKFY 575
Query: 496 EELRPEIINQTQTSKTDPPQCLSLAWSTDGQTLFAGYSDNTIRVW 630
L + P C+ + S+DG+ + G D +++W
Sbjct: 576 LSLYGHKL---------PVMCIDI--SSDGELIVTGSQDKNLKIW 609
Score = 36.3 bits (80), Expect = 0.022
Identities = 27/120 (22%), Positives = 50/120 (41%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 183
H V ++ ++ + SGS+D I LW+ + E + GH D V+ + F
Sbjct: 105 HKGAVTALRYNKVGSMLASGSKDNDIILWDVVGE-SGLFRLRGHRDQVTDLVFLDGGKK- 162
Query: 184 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 363
+VS D+ ++VW L GH + +V P+ +G D + + + +
Sbjct: 163 -LVSSSKDKFLRVWDLETQHCMQIVSGHHSEVWSVDTDPEERYVVTGSADQELRFYAVKE 221
>At2g19430.1 68415.m02267 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; contains 7 Trp-Asp WD-40
repeats
Length = 367
Score = 55.2 bits (127), Expect = 4e-08
Identities = 27/111 (24%), Positives = 51/111 (45%), Gaps = 5/111 (4%)
Frame = +1
Query: 187 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 366
+ + D W + + K+K+ GHS YL+TV S +G +D A +WD G
Sbjct: 174 VFTAAGDSCAYCWDVESGKIKMTFKGHSDYLHTVVSRSSASQILTGSEDGTARIWDCKTG 233
Query: 367 KHLHTLDHND-----IITALCFSPNRYWLCAAFGPSIKIWDLESKEMVEEL 504
K + + D ++++ + WL G ++ +W+L + E V+ +
Sbjct: 234 KCVKVIGSQDKKSRLRVSSMALDGSESWLVCGQGKNLALWNLPASECVQTI 284
>At5g50120.1 68418.m06207 transducin family protein / WD-40 repeat
family protein Similar to En/Spm-like transposon protein
(gi:2739374)[Arabidopsis thaliana]; similar to
GTP-binding regulatory protein and WD-repeat protein;
contains 7 WD-40 repeats
Length = 388
Score = 54.8 bits (126), Expect = 6e-08
Identities = 58/236 (24%), Positives = 103/236 (43%), Gaps = 21/236 (8%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL-AECKYTIQDDGHSDWVSCVRFSPNHAN 180
H V +A S D + S S D+T+K+W T +C + + H D ++ V S N
Sbjct: 164 HVDAVSGLALSRDGTLLYSVSWDRTLKIWRTTDFKCLESF-TNAHDDAINAVALSENGD- 221
Query: 181 PIIVSCGWDRTVKVWHLT----NCKLKINH------LGHSGYLNTVTVS-PDGSLCASGG 327
I + D+ +KVW N K K H H+ +N + +S +GSL SGG
Sbjct: 222 --IYTGSSDQRIKVWRKNINEENVKKKRKHSLVAILSEHNSGINALALSGTNGSLLHSGG 279
Query: 328 KDMKAMLWDLNDGKHLHTLD--HNDIITALCFSPNRYWLCA-AFGPSIKIWDLESKEMVE 498
D ++W+ +DG + + + LC + LC+ + ++++W +K+
Sbjct: 280 SDGSILVWERDDGGDIVVVGMLRGHTESVLCLAVVSDILCSGSADKTVRLWKCSAKDYSC 339
Query: 499 ELRPEIINQTQTSKTDPPQCLSLAWSTDGQT------LFAGYSDNTIRVWQVSISA 648
E P +CL+ A+ + +++G D+ ++VWQV + A
Sbjct: 340 LAMLE-------GHLGPVKCLTGAFRDSRKADEASYHIYSGGLDSQVKVWQVLVPA 388
Score = 45.6 bits (103), Expect = 4e-05
Identities = 36/132 (27%), Positives = 60/132 (45%), Gaps = 3/132 (2%)
Frame = +1
Query: 247 KINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLH--TLDHNDIITALCFS 420
K + + H ++ + +S DG+L S D +W D K L T H+D I A+ S
Sbjct: 158 KASWVHHVDAVSGLALSRDGTLLYSVSWDRTLKIWRTTDFKCLESFTNAHDDAINAVALS 217
Query: 421 PNRYWLCAAFGPSIKIWDLE-SKEMVEELRPEIINQTQTSKTDPPQCLSLAWSTDGQTLF 597
N + IK+W ++E V++ R + + L+L+ T+G L
Sbjct: 218 ENGDIYTGSSDQRIKVWRKNINEENVKKKRKHSLVAILSEHNSGINALALS-GTNGSLLH 276
Query: 598 AGYSDNTIRVWQ 633
+G SD +I VW+
Sbjct: 277 SGGSDGSILVWE 288
>At5g49430.1 68418.m06116 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 9
(SP:Q9NSI6) {Homo sapiens}; contains Pfam PF00400: WD
domain, G-beta repeat (4 copies)
Length = 1677
Score = 54.8 bits (126), Expect = 6e-08
Identities = 46/182 (25%), Positives = 73/182 (40%), Gaps = 13/182 (7%)
Frame = +1
Query: 130 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 309
GH + V C + + +++ DR VKVW + + GH G + + VS +
Sbjct: 243 GHRNAVYCAIL--DRSGRYVITGSDDRLVKVWSMDTAYCLASCRGHEGDITDLAVSSNNI 300
Query: 310 LCASGGKDMKAMLWDLNDGKHLHTL-DHNDIITALCFSP---NRYWLCAAFGP-SIKIWD 474
AS D +W L DG + L H +TA+ FSP + Y L ++ + +IWD
Sbjct: 301 FIASASNDCVIRVWRLPDGLPVSVLRGHTGAVTAIAFSPRPGSPYQLLSSSDDGTCRIWD 360
Query: 475 LESKEMVEEL------RPEIINQTQTSKT--DPPQCLSLAWSTDGQTLFAGYSDNTIRVW 630
+ + P+ N +S Q A++ G G SD RV+
Sbjct: 361 ARGAQFAPRIYVPRPPSPDGKNSGPSSSNAQQSHQIFCCAFNASGSVFVTGSSDTLARVY 420
Query: 631 QV 636
V
Sbjct: 421 SV 422
Score = 31.1 bits (67), Expect = 0.82
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 2/102 (1%)
Frame = +1
Query: 10 KDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP-I 186
+ V +A+S+DNR +++ D I +WN ++ GH+ S + NP I
Sbjct: 545 RGVNMIAWSLDNRFVLAAIMDCRICVWNA-SDGSLVHSLTGHT--ASTYVMDVHPFNPRI 601
Query: 187 IVSCGWDRTVKVWHL-TNCKLKINHLGHSGYLNTVTVSPDGS 309
+S G+D VW + ++I + H ++ SPDG+
Sbjct: 602 AMSAGYDGKTIVWDIWEGIPIQIYDISHYKLVDG-KFSPDGT 642
>At4g05410.1 68417.m00823 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); U3
snoRNP-associated 55-kDa protein, Homo sapiens,
gb:NP_004695; Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) [Podospora anserina]
Length = 504
Score = 54.8 bits (126), Expect = 6e-08
Identities = 35/166 (21%), Positives = 78/166 (46%), Gaps = 1/166 (0%)
Frame = +1
Query: 1 DHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHAN 180
+H+++ L++A S D R + +G D+ + +W+ ++ GH + VSC+ F +
Sbjct: 220 NHSRESLALAVSSDGRYLATGGVDRHVHIWDVRTR-EHVQAFPGHRNTVSCLCF--RYGT 276
Query: 181 PIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTV-TVSPDGSLCASGGKDMKAMLWDL 357
+ S +DRTVKVW++ + + GH G + + + + +L G+D + +
Sbjct: 277 SELYSGSFDRTVKVWNVEDKAFITENHGHQGEILAIDALRKERALTV--GRDRTMLYHKV 334
Query: 358 NDGKHLHTLDHNDIITALCFSPNRYWLCAAFGPSIKIWDLESKEMV 495
+ + + + CF + +L + ++ +W + K+ V
Sbjct: 335 PESTRMIYRAPASSLESCCFISDNEYLSGSDNGTVALWGMLKKKPV 380
Score = 48.4 bits (110), Expect = 5e-06
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Frame = +1
Query: 265 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL-DHNDIITALCFSPNRYWL- 438
HS + VS DG A+GG D +WD+ +H+ H + ++ LCF L
Sbjct: 221 HSRESLALAVSSDGRYLATGGVDRHVHIWDVRTREHVQAFPGHRNTVSCLCFRYGTSELY 280
Query: 439 CAAFGPSIKIWDLESKEMVEE 501
+F ++K+W++E K + E
Sbjct: 281 SGSFDRTVKVWNVEDKAFITE 301
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 93
H + V+SVA S D+ + S S+D TI W+
Sbjct: 160 HRRSVVSVALSDDDSRGFSASKDGTIMHWD 189
Score = 28.3 bits (60), Expect = 5.8
Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Frame = +1
Query: 253 NHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLW--DLNDGKHLHTLDHNDIITALCFSPN 426
N+ + ++N V S L ASG + LW + N + L+ L + +L F+ +
Sbjct: 410 NNCSANSWVNAVATSRGSDLAASGAGNGFVRLWAVETNAIRPLYELPLTGFVNSLAFAKS 469
Query: 427 RYWLCAAFG 453
+L A G
Sbjct: 470 GKFLIAGVG 478
>At1g79990.1 68414.m09356 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606)
[Homo sapiens]; similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:O55029) [Mus
musculus]
Length = 920
Score = 54.8 bits (126), Expect = 6e-08
Identities = 41/143 (28%), Positives = 60/143 (41%), Gaps = 3/143 (2%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 183
H + VA ++S S D IKLW+ T +GHS +V V F+P N
Sbjct: 98 HADYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWLCTQIFEGHSHYVMQVTFNPKDTN- 156
Query: 184 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVT--VSPDGSLCASGGKDMKAMLWDL 357
S DRT+K+W+L + H +N V D +G D A +WD
Sbjct: 157 TFASASLDRTIKIWNLGSPDPNFTLDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDY 216
Query: 358 NDGKHLHTLD-HNDIITALCFSP 423
+ TL+ H ++A+ F P
Sbjct: 217 QTKSCVQTLEGHTHNVSAVSFHP 239
Score = 54.8 bits (126), Expect = 6e-08
Identities = 34/131 (25%), Positives = 61/131 (46%), Gaps = 2/131 (1%)
Frame = +1
Query: 4 HTKDVLSVAFSV-DNRQIVSGSRDKTIKLWNTLA-ECKYTIQDDGHSDWVSCVRFSPNHA 177
H+ V+ V F+ D S S D+TIK+WN + + +T+ D H V+CV +
Sbjct: 141 HSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL--DAHLKGVNCVDYFTGGD 198
Query: 178 NPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 357
P +++ D T KVW GH+ ++ V+ P+ + +G +D +W
Sbjct: 199 KPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPELPIIITGSEDGTVRIWHA 258
Query: 358 NDGKHLHTLDH 390
+ +TL++
Sbjct: 259 TTYRLENTLNY 269
Score = 52.8 bits (121), Expect = 2e-07
Identities = 46/147 (31%), Positives = 72/147 (48%), Gaps = 13/147 (8%)
Frame = +1
Query: 4 HTKDVLSVAFSV--DNRQIVSGSRDKTIKLWNTLAE-CKYTIQDDGHSDWVSCVRFSPNH 174
H K V V + D +++GS D T K+W+ + C T++ GH+ VS V F P
Sbjct: 184 HLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLE--GHTHNVSAVSFHPEL 241
Query: 175 ANPIIVSCGWDRTVKVWHLTNCKLK--INH-------LGH-SGYLNTVTVSPDGSLCASG 324
PII++ D TV++WH T +L+ +N+ +GH G V +GS+
Sbjct: 242 --PIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGHIKGSRRVVIGYDEGSIMVKL 299
Query: 325 GKDMKAMLWDLNDGKHLHTLDHNDIIT 405
G+++ D N GK + HN+I T
Sbjct: 300 GREIPVASMD-NSGKIIWA-KHNEIHT 324
>At4g28450.1 68417.m04071 transducin family protein / WD-40 repeat
family protein SOF1 (involved in rRNA processing)
protein-yeast
Length = 442
Score = 54.4 bits (125), Expect = 8e-08
Identities = 25/77 (32%), Positives = 41/77 (53%)
Frame = +1
Query: 127 DGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDG 306
DGH D VSC+ +PN+ I S D +++W +++ + GH G + +T S DG
Sbjct: 53 DGHRDGVSCMAKNPNYLKGIF-SASMDGDIRLWDISSRRTVCQFPGHQGAVRGLTASTDG 111
Query: 307 SLCASGGKDMKAMLWDL 357
++ S G D LW++
Sbjct: 112 NVLVSCGTDCTVRLWNV 128
Score = 37.5 bits (83), Expect = 0.009
Identities = 45/194 (23%), Positives = 87/194 (44%), Gaps = 16/194 (8%)
Frame = +1
Query: 52 IVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHL 231
I S S D I+LW+ ++ + Q GH V + S + ++VSCG D TV++W++
Sbjct: 72 IFSASMDGDIRLWD-ISSRRTVCQFPGHQGAVRGLTASTD--GNVLVSCGTDCTVRLWNV 128
Query: 232 TNCKLKINHLGHSGYLN------------TVTVSPDGSLCASGGKDMKAMLWDLNDGKHL 375
L+ + + ++ V +G L A+ G + +W+ N + +
Sbjct: 129 PRPSLEDSSISSENFIEPSATYVWKNAFWAVDHQFEGDLFATAGAQLD--IWNHNRSQPV 186
Query: 376 HTLD-HNDIITALCFSPNRYWLCA--AFGPSIKIWDLESKEMVEELRPEIINQTQTSKTD 546
+ D + ++ F+P L A A SI I+DL ++ ++ +T + +
Sbjct: 187 QSFQWGTDSVISVRFNPGEPNLLATSASDRSITIYDLRLSSAARKI--IMMTKTNSIAWN 244
Query: 547 PPQCLSL-AWSTDG 585
P + ++L A + DG
Sbjct: 245 PMEPMNLTAANEDG 258
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
Frame = +1
Query: 4 HTKD---VLSVAFSVDNRQIVSGSRDKTIKLWNTLA 102
HTK V V +S D ++SGS D ++LW A
Sbjct: 318 HTKRMQRVFCVKYSCDATYVISGSDDTNLRLWKAKA 353
>At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 883
Score = 54.4 bits (125), Expect = 8e-08
Identities = 32/122 (26%), Positives = 64/122 (52%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 183
H DVL +A+S ++ ++S S DKT++LWN ++ ++ HSD+V+C++F+P +
Sbjct: 512 HVDDVLDLAWS-KSQHLLSSSMDKTVRLWNLSSQT--CLKVFSHSDYVTCIQFNPVD-DR 567
Query: 184 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 363
+S D V+VW + + ++ ++ + + +PDG G ++ +D
Sbjct: 568 YFISGSLDAKVRVWSIPDRQV-VDWYDLHEMVTSACYTPDGQGVLVGSYKGSCRMYSASD 626
Query: 364 GK 369
K
Sbjct: 627 NK 628
Score = 49.2 bits (112), Expect = 3e-06
Identities = 35/168 (20%), Positives = 81/168 (48%), Gaps = 2/168 (1%)
Frame = +1
Query: 130 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DG 306
GH D V + +S + ++S D+TV++W+L++ + + HS Y+ + +P D
Sbjct: 511 GHVDDVLDLAWSKSQH---LLSSSMDKTVRLWNLSS-QTCLKVFSHSDYVTCIQFNPVDD 566
Query: 307 SLCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCFSPN-RYWLCAAFGPSIKIWDLES 483
SG D K +W + D + + D ++++T+ C++P+ + L ++ S +++
Sbjct: 567 RYFISGSLDAKVRVWSIPDRQVVDWYDLHEMVTSACYTPDGQGVLVGSYKGSCRMYSASD 626
Query: 484 KEMVEELRPEIINQTQTSKTDPPQCLSLAWSTDGQTLFAGYSDNTIRV 627
++ ++ + + N+ + + + + L SD+ IRV
Sbjct: 627 NKLQQKSQINLQNKKKKAHQKKITGFQFVPGSSSEVLVTS-SDSRIRV 673
>At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 54.0 bits (124), Expect = 1e-07
Identities = 47/175 (26%), Positives = 80/175 (45%), Gaps = 11/175 (6%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQ--IVSGSRDKTIKLWNTLAECK-YTIQDDGHSDWVSCVRFSPNH 174
H V +AFS N+Q + + DKTIK+W+ K YT + + C + N
Sbjct: 461 HVGGVNDIAFSTPNKQLCVTTCGDDKTIKVWDAATGVKRYTFEGHEAPVYSICPHYKENI 520
Query: 175 ANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGG--KDMKAML 348
I S D +K W N ++++ + T+ S DG+ S G KD ++ +
Sbjct: 521 Q--FIFSTALDGKIKAWLYDNMGSRVDYEAPGRWCTTMAYSADGTRLFSCGTSKDGESFI 578
Query: 349 --WDLNDG--KHLHTLDHNDIITALCF--SPNRYWLCAAFGPSIKIWDLESKEMV 495
W+ ++G K + H + + F + NRY L A SIK WD+++ +++
Sbjct: 579 VEWNESEGAVKRTYQGFHKRSLGVVQFDTTKNRY-LAAGDDFSIKFWDMDTIQLL 632
Score = 32.3 bits (70), Expect = 0.36
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +1
Query: 118 IQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGH 267
++ D H V+ + FS + + +CG D+T+KVW + GH
Sbjct: 456 LEIDAHVGGVNDIAFSTPNKQLCVTTCGDDKTIKVWDAATGVKRYTFEGH 505
>At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 54.0 bits (124), Expect = 1e-07
Identities = 47/175 (26%), Positives = 80/175 (45%), Gaps = 11/175 (6%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQ--IVSGSRDKTIKLWNTLAECK-YTIQDDGHSDWVSCVRFSPNH 174
H V +AFS N+Q + + DKTIK+W+ K YT + + C + N
Sbjct: 461 HVGGVNDIAFSTPNKQLCVTTCGDDKTIKVWDAATGVKRYTFEGHEAPVYSICPHYKENI 520
Query: 175 ANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGG--KDMKAML 348
I S D +K W N ++++ + T+ S DG+ S G KD ++ +
Sbjct: 521 Q--FIFSTALDGKIKAWLYDNMGSRVDYEAPGRWCTTMAYSADGTRLFSCGTSKDGESFI 578
Query: 349 --WDLNDG--KHLHTLDHNDIITALCF--SPNRYWLCAAFGPSIKIWDLESKEMV 495
W+ ++G K + H + + F + NRY L A SIK WD+++ +++
Sbjct: 579 VEWNESEGAVKRTYQGFHKRSLGVVQFDTTKNRY-LAAGDDFSIKFWDMDTIQLL 632
Score = 32.3 bits (70), Expect = 0.36
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +1
Query: 118 IQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGH 267
++ D H V+ + FS + + +CG D+T+KVW + GH
Sbjct: 456 LEIDAHVGGVNDIAFSTPNKQLCVTTCGDDKTIKVWDAATGVKRYTFEGH 505
>At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 694
Score = 53.6 bits (123), Expect = 1e-07
Identities = 47/213 (22%), Positives = 104/213 (48%), Gaps = 4/213 (1%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 183
H+ D+L +++S +NR ++S S D +++LW C+ + H+++V+ V+F+P +
Sbjct: 355 HSGDILDISWSKNNR-LLSASVDNSVRLWQI--GCEDCLGIFSHNNYVTSVQFNPVDDDH 411
Query: 184 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 363
I S D V++W + C++ ++ G + V PDG G ++++
Sbjct: 412 FI-SGSIDGKVRIWSASQCQV-VDWADARGIVTAVCYQPDGQAVIIGTLTSDCRFYNVSG 469
Query: 364 GKHLHTLDHNDIITALCFSPNRYWLCAAFG---PS-IKIWDLESKEMVEELRPEIINQTQ 531
H LD + + S N+ + F PS + + +S+ + R ++++ +
Sbjct: 470 --HCLQLDGHICLHNKKKSSNKRIIGFQFDSTDPSRVMVASADSQVRIISGR-NVVHKYK 526
Query: 532 TSKTDPPQCLSLAWSTDGQTLFAGYSDNTIRVW 630
S+ Q +S +++ DG+ + + D+++ VW
Sbjct: 527 GSRNAGNQ-ISASFTADGKHIVSACDDSSVYVW 558
Score = 46.4 bits (105), Expect = 2e-05
Identities = 26/100 (26%), Positives = 50/100 (50%), Gaps = 1/100 (1%)
Frame = +1
Query: 130 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DG 306
GHS + + +S N+ ++S D +V++W + C+ + H+ Y+ +V +P D
Sbjct: 354 GHSGDILDISWSKNNR---LLSASVDNSVRLWQI-GCEDCLGIFSHNNYVTSVQFNPVDD 409
Query: 307 SLCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCFSPN 426
SG D K +W + + + D I+TA+C+ P+
Sbjct: 410 DHFISGSIDGKVRIWSASQCQVVDWADARGIVTAVCYQPD 449
>At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); rab11 binding protein, Bos
taurus, EMBL:AF117897
Length = 905
Score = 53.6 bits (123), Expect = 1e-07
Identities = 32/122 (26%), Positives = 65/122 (53%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 183
H DVL +++S ++ ++S S DKT++LW+ E + ++ H+D+V+CV+F+P +
Sbjct: 518 HLDDVLDLSWS-RSQLLLSSSMDKTVRLWD--IETQSCLKLFAHNDYVTCVQFNPLDED- 573
Query: 184 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 363
+S D +++W+++N ++ + + V +PDG G + L+ D
Sbjct: 574 YFISGSLDAKIRIWNISNRQV-VEWNDLKEMVTAVCYTPDGQAAFVGSINGHCRLYSAED 632
Query: 364 GK 369
K
Sbjct: 633 CK 634
Score = 48.0 bits (109), Expect = 7e-06
Identities = 28/101 (27%), Positives = 56/101 (55%), Gaps = 2/101 (1%)
Frame = +1
Query: 130 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHL-TNCKLKINHLGHSGYLNTVTVSP-D 303
GH D V + +S + +++S D+TV++W + T LK+ H+ Y+ V +P D
Sbjct: 517 GHLDDVLDLSWSRSQ---LLLSSSMDKTVRLWDIETQSCLKL--FAHNDYVTCVQFNPLD 571
Query: 304 GSLCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCFSPN 426
SG D K +W++++ + + D +++TA+C++P+
Sbjct: 572 EDYFISGSLDAKIRIWNISNRQVVEWNDLKEMVTAVCYTPD 612
Score = 31.5 bits (68), Expect = 0.62
Identities = 32/141 (22%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Frame = +1
Query: 265 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCFSPNRYWLCA 444
H G + T+ SPD L AS G+D +W++ + + + + +T + S + +
Sbjct: 410 HQGGIWTMKFSPDSHLLASAGEDCAIHVWEVQECEIMSM--NEGSLTPIHPSMSGSTDKS 467
Query: 445 AFGPSIKIWDLESKEMVEELR------PEIINQTQT--SKTDPPQC---------LSLAW 573
+ G + ++ + K+ + P+ ++ +T S +D P C L L+W
Sbjct: 468 SEGDAAEVSQDKKKKGKTSMSKKGNQIPDYVHAPETVFSLSDKPICSFTGHLDDVLDLSW 527
Query: 574 STDGQTLFAGYSDNTIRVWQV 636
S Q L + D T+R+W +
Sbjct: 528 SR-SQLLLSSSMDKTVRLWDI 547
>At3g49180.1 68416.m05375 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
GTP-binding protein beta chain homolog, Nicotiana
tabacum, PIR:T16970
Length = 438
Score = 53.6 bits (123), Expect = 1e-07
Identities = 34/129 (26%), Positives = 62/129 (48%), Gaps = 10/129 (7%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL----------AECKYTIQDDGHSDWVSC 153
H + V + FS D+ +VSGS+D +I++W+ + Y + H+ V+
Sbjct: 119 HYRSVTCLVFSGDDSLLVSGSQDGSIRVWSLIRLFDDFQRQQGNTLYEHNFNEHTMSVTD 178
Query: 154 VRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKD 333
+ N +I+S DRT KVW L+ KL + ++ +N + + P G + +G +D
Sbjct: 179 IVIDYGGCNAVIISSSEDRTCKVWSLSRGKL-LKNIIFPSVINALALDPGGCVFYAGARD 237
Query: 334 MKAMLWDLN 360
K + +N
Sbjct: 238 SKIYIGAIN 246
Score = 45.2 bits (102), Expect = 5e-05
Identities = 51/218 (23%), Positives = 90/218 (41%), Gaps = 13/218 (5%)
Frame = +1
Query: 16 VLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVS 195
+ ++A + + +V G I LW +A K + GH V+C+ FS + + ++VS
Sbjct: 81 IKALAANNEGTYLVGGGISGDIYLWE-VATGKLLKKWHGHYRSVTCLVFSGDDS--LLVS 137
Query: 196 CGWDRTVKVWHLT-----------NCKLKINHLGHSGYLNTVTVSPDG--SLCASGGKDM 336
D +++VW L N + N H+ + + + G ++ S +D
Sbjct: 138 GSQDGSIRVWSLIRLFDDFQRQQGNTLYEHNFNEHTMSVTDIVIDYGGCNAVIISSSEDR 197
Query: 337 KAMLWDLNDGKHLHTLDHNDIITALCFSPNRYWLCAAFGPSIKIWDLESKEMVEELRPEI 516
+W L+ GK L + +I AL P A S KI+ + + E ++
Sbjct: 198 TCKVWSLSRGKLLKNIIFPSVINALALDPGGCVFYAGARDS-KIY-IGAINATSEYGTQV 255
Query: 517 INQTQTSKTDPPQCLSLAWSTDGQTLFAGYSDNTIRVW 630
+ + K CL A+ DG L +G D + VW
Sbjct: 256 LGSV-SEKGKAITCL--AYCADGNLLISGSEDGVVCVW 290
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 301 DGSLCASGGKDMKAMLWDLNDGKHLHTLDH 390
DG+L SG +D +WD +H+ TL H
Sbjct: 274 DGNLLISGSEDGVVCVWDPKSLRHVRTLIH 303
>At3g18860.2 68416.m02396 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 53.6 bits (123), Expect = 1e-07
Identities = 49/153 (32%), Positives = 71/153 (46%), Gaps = 3/153 (1%)
Frame = +1
Query: 49 QIVSGSRDKTIKLWNTL-AECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 225
++VSGS D + +WN + E T++ GH V+ V N IVS D+T+K W
Sbjct: 85 RLVSGSMDTFVFVWNLMNGENIQTLK--GHQMQVTGVAID----NEDIVSSSVDQTLKRW 138
Query: 226 HLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGK-HLHTLD-HNDI 399
N +L + H + V P G L SG D LW GK L TL H D
Sbjct: 139 R--NGQLVESWDAHQSPIQAVIRLPSGEL-VSGSSDASLKLWK---GKTSLQTLSGHTDT 192
Query: 400 ITALCFSPNRYWLCAAFGPSIKIWDLESKEMVE 498
+ L P+ +L A+ SI++W L + ++E
Sbjct: 193 VRGLAVMPDLGFLSASHDGSIRLWALSGEVLLE 225
Score = 48.4 bits (110), Expect = 5e-06
Identities = 37/169 (21%), Positives = 78/169 (46%), Gaps = 1/169 (0%)
Frame = +1
Query: 1 DHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQD-DGHSDWVSCVRFSPNHA 177
D + + + + ++VSGS D ++KLW + K ++Q GH+D V + P+
Sbjct: 148 DAHQSPIQAVIRLPSGELVSGSSDASLKLW----KGKTSLQTLSGHTDTVRGLAVMPDLG 203
Query: 178 NPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 357
+S D ++++W L+ ++ + +GH+ + +V G L S +D A +W
Sbjct: 204 ---FLSASHDGSIRLWALSG-EVLLEMVGHTSLVYSVDAHSSG-LIVSASEDRHAKIW-- 256
Query: 358 NDGKHLHTLDHNDIITALCFSPNRYWLCAAFGPSIKIWDLESKEMVEEL 504
DG + +L+H I F + A +++W + + +++
Sbjct: 257 KDGVCVQSLEHPGCIWDAKFLETGDIVTACSDGVVRVWTVRHDAIADQM 305
Score = 40.7 bits (91), Expect = 0.001
Identities = 42/164 (25%), Positives = 70/164 (42%), Gaps = 8/164 (4%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLW--NTLAECKYTIQDD--GHSDWVSCVRFSP- 168
H DV + D I + SRD+TI++W + + KYT + GH+ +V + + P
Sbjct: 19 HDDDVRGICVCNDEN-IATSSRDRTIRVWSLDPSDKRKYTSEKILLGHTSFVGPLAWIPP 77
Query: 169 --NHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKA 342
+ +VS D V VW+L N + GH + V+ D S D
Sbjct: 78 TDEYPEGRLVSGSMDTFVFVWNLMNGENIQTLKGHQ--MQVTGVAIDNEDIVSSSVDQTL 135
Query: 343 MLWDLNDGKHLHTLD-HNDIITALCFSPNRYWLCAAFGPSIKIW 471
W +G+ + + D H I A+ P+ + + S+K+W
Sbjct: 136 KRW--RNGQLVESWDAHQSPIQAVIRLPSGELVSGSSDASLKLW 177
Score = 40.7 bits (91), Expect = 0.001
Identities = 44/158 (27%), Positives = 67/158 (42%), Gaps = 2/158 (1%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 183
H V VA +DN IVS S D+T+K W + D H + V P+
Sbjct: 112 HQMQVTGVA--IDNEDIVSSSVDQTLKRWR---NGQLVESWDAHQSPIQAVIRLPSGE-- 164
Query: 184 IIVSCGWDRTVKVWHLTNCKLKINHL-GHSGYLNTVTVSPD-GSLCASGGKDMKAMLWDL 357
+VS D ++K+W K + L GH+ + + V PD G L AS D LW L
Sbjct: 165 -LVSGSSDASLKLW---KGKTSLQTLSGHTDTVRGLAVMPDLGFLSAS--HDGSIRLWAL 218
Query: 358 NDGKHLHTLDHNDIITALCFSPNRYWLCAAFGPSIKIW 471
+ L + H ++ ++ + + A+ KIW
Sbjct: 219 SGEVLLEMVGHTSLVYSVDAHSSGLIVSASEDRHAKIW 256
>At3g18860.1 68416.m02395 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 53.6 bits (123), Expect = 1e-07
Identities = 49/153 (32%), Positives = 71/153 (46%), Gaps = 3/153 (1%)
Frame = +1
Query: 49 QIVSGSRDKTIKLWNTL-AECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 225
++VSGS D + +WN + E T++ GH V+ V N IVS D+T+K W
Sbjct: 85 RLVSGSMDTFVFVWNLMNGENIQTLK--GHQMQVTGVAID----NEDIVSSSVDQTLKRW 138
Query: 226 HLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGK-HLHTLD-HNDI 399
N +L + H + V P G L SG D LW GK L TL H D
Sbjct: 139 R--NGQLVESWDAHQSPIQAVIRLPSGEL-VSGSSDASLKLWK---GKTSLQTLSGHTDT 192
Query: 400 ITALCFSPNRYWLCAAFGPSIKIWDLESKEMVE 498
+ L P+ +L A+ SI++W L + ++E
Sbjct: 193 VRGLAVMPDLGFLSASHDGSIRLWALSGEVLLE 225
Score = 48.4 bits (110), Expect = 5e-06
Identities = 37/169 (21%), Positives = 78/169 (46%), Gaps = 1/169 (0%)
Frame = +1
Query: 1 DHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQD-DGHSDWVSCVRFSPNHA 177
D + + + + ++VSGS D ++KLW + K ++Q GH+D V + P+
Sbjct: 148 DAHQSPIQAVIRLPSGELVSGSSDASLKLW----KGKTSLQTLSGHTDTVRGLAVMPDLG 203
Query: 178 NPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 357
+S D ++++W L+ ++ + +GH+ + +V G L S +D A +W
Sbjct: 204 ---FLSASHDGSIRLWALSG-EVLLEMVGHTSLVYSVDAHSSG-LIVSASEDRHAKIW-- 256
Query: 358 NDGKHLHTLDHNDIITALCFSPNRYWLCAAFGPSIKIWDLESKEMVEEL 504
DG + +L+H I F + A +++W + + +++
Sbjct: 257 KDGVCVQSLEHPGCIWDAKFLETGDIVTACSDGVVRVWTVRHDAIADQM 305
Score = 40.7 bits (91), Expect = 0.001
Identities = 42/164 (25%), Positives = 70/164 (42%), Gaps = 8/164 (4%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLW--NTLAECKYTIQDD--GHSDWVSCVRFSP- 168
H DV + D I + SRD+TI++W + + KYT + GH+ +V + + P
Sbjct: 19 HDDDVRGICVCNDEN-IATSSRDRTIRVWSLDPSDKRKYTSEKILLGHTSFVGPLAWIPP 77
Query: 169 --NHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKA 342
+ +VS D V VW+L N + GH + V+ D S D
Sbjct: 78 TDEYPEGRLVSGSMDTFVFVWNLMNGENIQTLKGHQ--MQVTGVAIDNEDIVSSSVDQTL 135
Query: 343 MLWDLNDGKHLHTLD-HNDIITALCFSPNRYWLCAAFGPSIKIW 471
W +G+ + + D H I A+ P+ + + S+K+W
Sbjct: 136 KRW--RNGQLVESWDAHQSPIQAVIRLPSGELVSGSSDASLKLW 177
Score = 40.7 bits (91), Expect = 0.001
Identities = 44/158 (27%), Positives = 67/158 (42%), Gaps = 2/158 (1%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 183
H V VA +DN IVS S D+T+K W + D H + V P+
Sbjct: 112 HQMQVTGVA--IDNEDIVSSSVDQTLKRWR---NGQLVESWDAHQSPIQAVIRLPSGE-- 164
Query: 184 IIVSCGWDRTVKVWHLTNCKLKINHL-GHSGYLNTVTVSPD-GSLCASGGKDMKAMLWDL 357
+VS D ++K+W K + L GH+ + + V PD G L AS D LW L
Sbjct: 165 -LVSGSSDASLKLW---KGKTSLQTLSGHTDTVRGLAVMPDLGFLSAS--HDGSIRLWAL 218
Query: 358 NDGKHLHTLDHNDIITALCFSPNRYWLCAAFGPSIKIW 471
+ L + H ++ ++ + + A+ KIW
Sbjct: 219 SGEVLLEMVGHTSLVYSVDAHSSGLIVSASEDRHAKIW 256
>At2g46280.3 68415.m05757 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 254
Score = 53.6 bits (123), Expect = 1e-07
Identities = 42/170 (24%), Positives = 71/170 (41%), Gaps = 3/170 (1%)
Frame = +1
Query: 130 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 309
GH ++ +R+ N ++ SC D T +W N + + GH+G + VS D S
Sbjct: 8 GHERPLTFLRY--NREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSS 65
Query: 310 LCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCFS-PNRYWLCAAFGPSIKIWDLESK 486
+G D A LWD+ GK L T N ++ F+ +R + + + K
Sbjct: 66 RLITGSADQTAKLWDVKSGKELFTFKFNAPTRSVDFAVGDRLAVITTDHFVDRTAAIHVK 125
Query: 487 EMVEELRPEIINQTQTSK-TDPPQCLSLA-WSTDGQTLFAGYSDNTIRVW 630
+ E+ + D + ++ A W QT+ +G D IR+W
Sbjct: 126 RIAEDPEEQDAESVLVLHCPDGKKRINRAVWGPLNQTIVSGGEDKVIRIW 175
Score = 37.9 bits (84), Expect = 0.007
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Frame = +1
Query: 277 LNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD----HNDIITALC-FSPNRYWLC 441
+N P SGG+D +WD GK L D H IT+LC + + ++L
Sbjct: 151 INRAVWGPLNQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLT 210
Query: 442 AAFGPSIKIWDLESKEMVE 498
+ + K+WD+ + +++
Sbjct: 211 GSLDKTAKLWDMRTLTLLK 229
Score = 37.1 bits (82), Expect = 0.012
Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 3/91 (3%)
Frame = +1
Query: 178 NPIIVSCGWDRTVKVWHLTNCKL---KINHLGHSGYLNTVTVSPDGSLCASGGKDMKAML 348
N IVS G D+ +++W KL +GH + ++ + D S +G D A L
Sbjct: 160 NQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKL 219
Query: 349 WDLNDGKHLHTLDHNDIITALCFSPNRYWLC 441
WD+ L T + A+ SP +C
Sbjct: 220 WDMRTLTLLKTYTTVVPVNAVSLSPLLNHVC 250
Score = 34.3 bits (75), Expect = 0.088
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 93
H KD+ S+ + D+ ++GS DKT KLW+
Sbjct: 192 HKKDITSLCKAADDSHFLTGSLDKTAKLWD 221
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/70 (25%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Frame = +1
Query: 43 NRQIVSGSRDKTIKLWN--TLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTV 216
N+ IVSG DK I++W+ T K + ++ GH ++ + + + ++ ++ D+T
Sbjct: 160 NQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSH--FLTGSLDKTA 217
Query: 217 KVWHLTNCKL 246
K+W + L
Sbjct: 218 KLWDMRTLTL 227
>At2g46280.2 68415.m05756 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 53.6 bits (123), Expect = 1e-07
Identities = 42/170 (24%), Positives = 71/170 (41%), Gaps = 3/170 (1%)
Frame = +1
Query: 130 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 309
GH ++ +R+ N ++ SC D T +W N + + GH+G + VS D S
Sbjct: 8 GHERPLTFLRY--NREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSS 65
Query: 310 LCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCFS-PNRYWLCAAFGPSIKIWDLESK 486
+G D A LWD+ GK L T N ++ F+ +R + + + K
Sbjct: 66 RLITGSADQTAKLWDVKSGKELFTFKFNAPTRSVDFAVGDRLAVITTDHFVDRTAAIHVK 125
Query: 487 EMVEELRPEIINQTQTSK-TDPPQCLSLA-WSTDGQTLFAGYSDNTIRVW 630
+ E+ + D + ++ A W QT+ +G D IR+W
Sbjct: 126 RIAEDPEEQDAESVLVLHCPDGKKRINRAVWGPLNQTIVSGGEDKVIRIW 175
Score = 37.9 bits (84), Expect = 0.007
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Frame = +1
Query: 277 LNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD----HNDIITALC-FSPNRYWLC 441
+N P SGG+D +WD GK L D H IT+LC + + ++L
Sbjct: 151 INRAVWGPLNQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLT 210
Query: 442 AAFGPSIKIWDLESKEMVE 498
+ + K+WD+ + +++
Sbjct: 211 GSLDKTAKLWDMRTLTLLK 229
Score = 37.9 bits (84), Expect = 0.007
Identities = 39/126 (30%), Positives = 57/126 (45%), Gaps = 16/126 (12%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN--TLAECK-YTIQDDGHSDWVSCVRFSPNH 174
H KD+ S+ + D+ ++GS DKT KLW+ TL K YT V+ V SP
Sbjct: 192 HKKDITSLCKAADDSHFLTGSLDKTAKLWDMRTLTLLKTYTTVVP-----VNAVSLSP-L 245
Query: 175 ANPIIVSCGWD---------RTVKVWHLTNCKLKINHL----GHSGYLNTVTVSPDGSLC 315
N +++ G D R K K+ + GH G +N + +PDG
Sbjct: 246 LNHVVLGGGQDASAVTTTDHRAGKFEAKFYDKILQEEIGGVKGHFGPINALAFNPDGKSF 305
Query: 316 ASGGKD 333
+SGG+D
Sbjct: 306 SSGGED 311
Score = 36.7 bits (81), Expect = 0.017
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 3/85 (3%)
Frame = +1
Query: 178 NPIIVSCGWDRTVKVWHLTNCKL---KINHLGHSGYLNTVTVSPDGSLCASGGKDMKAML 348
N IVS G D+ +++W KL +GH + ++ + D S +G D A L
Sbjct: 160 NQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKL 219
Query: 349 WDLNDGKHLHTLDHNDIITALCFSP 423
WD+ L T + A+ SP
Sbjct: 220 WDMRTLTLLKTYTTVVPVNAVSLSP 244
Score = 33.1 bits (72), Expect = 0.20
Identities = 26/104 (25%), Positives = 52/104 (50%), Gaps = 3/104 (2%)
Frame = +1
Query: 43 NRQIVSGSRDKTIKLWN--TLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTV 216
N+ IVSG DK I++W+ T K + ++ GH ++ + + + ++ ++ D+T
Sbjct: 160 NQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSH--FLTGSLDKTA 217
Query: 217 KVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAM 345
K+W + L + +N V++SP + GG+D A+
Sbjct: 218 KLWDMRTLTL-LKTYTTVVPVNAVSLSPLLNHVVLGGGQDASAV 260
>At2g46280.1 68415.m05755 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 53.6 bits (123), Expect = 1e-07
Identities = 42/170 (24%), Positives = 71/170 (41%), Gaps = 3/170 (1%)
Frame = +1
Query: 130 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 309
GH ++ +R+ N ++ SC D T +W N + + GH+G + VS D S
Sbjct: 8 GHERPLTFLRY--NREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSS 65
Query: 310 LCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCFS-PNRYWLCAAFGPSIKIWDLESK 486
+G D A LWD+ GK L T N ++ F+ +R + + + K
Sbjct: 66 RLITGSADQTAKLWDVKSGKELFTFKFNAPTRSVDFAVGDRLAVITTDHFVDRTAAIHVK 125
Query: 487 EMVEELRPEIINQTQTSK-TDPPQCLSLA-WSTDGQTLFAGYSDNTIRVW 630
+ E+ + D + ++ A W QT+ +G D IR+W
Sbjct: 126 RIAEDPEEQDAESVLVLHCPDGKKRINRAVWGPLNQTIVSGGEDKVIRIW 175
Score = 37.9 bits (84), Expect = 0.007
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Frame = +1
Query: 277 LNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD----HNDIITALC-FSPNRYWLC 441
+N P SGG+D +WD GK L D H IT+LC + + ++L
Sbjct: 151 INRAVWGPLNQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLT 210
Query: 442 AAFGPSIKIWDLESKEMVE 498
+ + K+WD+ + +++
Sbjct: 211 GSLDKTAKLWDMRTLTLLK 229
Score = 37.9 bits (84), Expect = 0.007
Identities = 39/126 (30%), Positives = 57/126 (45%), Gaps = 16/126 (12%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN--TLAECK-YTIQDDGHSDWVSCVRFSPNH 174
H KD+ S+ + D+ ++GS DKT KLW+ TL K YT V+ V SP
Sbjct: 192 HKKDITSLCKAADDSHFLTGSLDKTAKLWDMRTLTLLKTYTTVVP-----VNAVSLSP-L 245
Query: 175 ANPIIVSCGWD---------RTVKVWHLTNCKLKINHL----GHSGYLNTVTVSPDGSLC 315
N +++ G D R K K+ + GH G +N + +PDG
Sbjct: 246 LNHVVLGGGQDASAVTTTDHRAGKFEAKFYDKILQEEIGGVKGHFGPINALAFNPDGKSF 305
Query: 316 ASGGKD 333
+SGG+D
Sbjct: 306 SSGGED 311
Score = 36.7 bits (81), Expect = 0.017
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 3/85 (3%)
Frame = +1
Query: 178 NPIIVSCGWDRTVKVWHLTNCKL---KINHLGHSGYLNTVTVSPDGSLCASGGKDMKAML 348
N IVS G D+ +++W KL +GH + ++ + D S +G D A L
Sbjct: 160 NQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKL 219
Query: 349 WDLNDGKHLHTLDHNDIITALCFSP 423
WD+ L T + A+ SP
Sbjct: 220 WDMRTLTLLKTYTTVVPVNAVSLSP 244
Score = 33.1 bits (72), Expect = 0.20
Identities = 26/104 (25%), Positives = 52/104 (50%), Gaps = 3/104 (2%)
Frame = +1
Query: 43 NRQIVSGSRDKTIKLWN--TLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTV 216
N+ IVSG DK I++W+ T K + ++ GH ++ + + + ++ ++ D+T
Sbjct: 160 NQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSH--FLTGSLDKTA 217
Query: 217 KVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAM 345
K+W + L + +N V++SP + GG+D A+
Sbjct: 218 KLWDMRTLTL-LKTYTTVVPVNAVSLSPLLNHVVLGGGQDASAV 260
>At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogenesis
repressor; identical to COP1 regulatory protein/FUSCA
protein FUS1 GI:402685 SP:P43254
Length = 675
Score = 53.6 bits (123), Expect = 1e-07
Identities = 53/214 (24%), Positives = 88/214 (41%), Gaps = 5/214 (2%)
Frame = +1
Query: 1 DHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHA 177
+H K SV FS + +VSGS D +K+W T E I D ++ + CV+++P +
Sbjct: 461 EHEKRAWSVDFSRTEPSMLVSGSDDCKVKVWCTRQEAS-VINIDMKAN-ICCVKYNPGSS 518
Query: 178 NPIIVSCGWDRTVKVWHLTNCKLKIN-HLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 354
N I V D + + L N ++ GH ++ V + L AS D LWD
Sbjct: 519 NYIAVGSA-DHHIHYYDLRNISQPLHVFSGHKKAVSYVKFLSNNEL-ASASTDSTLRLWD 576
Query: 355 LNDGKHLHTL-DHNDIITALCFSPN-RYWLCAAFGPSIKIWDLESKEMVEELRPEIINQT 528
+ D + T H + + + N Y C + + ++ E V R +
Sbjct: 577 VKDNLPVRTFRGHTNEKNFVGLTVNSEYLACGSETNEVYVYHKEITRPVTSHRFGSPDMD 636
Query: 529 QTSKTDPPQCLS-LAWSTDGQTLFAGYSDNTIRV 627
+ +S + W +D T+ S TI+V
Sbjct: 637 DAEEEAGSYFISAVCWKSDSPTMLTANSQGTIKV 670
>At1g24530.1 68414.m03088 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 7 WD-40 repeats (PF00400)
Length = 418
Score = 53.6 bits (123), Expect = 1e-07
Identities = 43/173 (24%), Positives = 77/173 (44%), Gaps = 6/173 (3%)
Frame = +1
Query: 133 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSL 312
H+D V+ + S I S WD+T+K+W ++ + K + H +N + VS +G++
Sbjct: 194 HADAVTALAVSDG----FIYSVSWDKTLKIWRASDLRCKESIKAHDDAVNAIAVSTNGTV 249
Query: 313 CASGGKDMKAMLWDLNDGKHLHTL-----DHNDIITALCFSPNRYWL-CAAFGPSIKIWD 474
+G D + +W G+ HTL H + AL + + L + SI +W+
Sbjct: 250 -YTGSADRRIRVWAKPTGEKRHTLVATLEKHKSAVNALALNDDGSVLFSGSCDRSILVWE 308
Query: 475 LESKEMVEELRPEIINQTQTSKTDPPQCLSLAWSTDGQTLFAGYSDNTIRVWQ 633
E +R + + LSL +D L +G +D T+R+W+
Sbjct: 309 REDTSNYMAVRGALRGHDKA-------ILSLFNVSD--LLLSGSADRTVRIWR 352
Score = 48.4 bits (110), Expect = 5e-06
Identities = 50/219 (22%), Positives = 96/219 (43%), Gaps = 13/219 (5%)
Frame = +1
Query: 28 AFSVDNRQIVSGSRDKTIKLWNTL-AECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGW 204
A +V + I S S DKT+K+W CK +I+ H D V+ + S N + +
Sbjct: 200 ALAVSDGFIYSVSWDKTLKIWRASDLRCKESIK--AHDDAVNAIAVS---TNGTVYTGSA 254
Query: 205 DRTVKVWHLTNCKLKINHLG----HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKH 372
DR ++VW + + + H +N + ++ DGS+ SG D ++W+ D +
Sbjct: 255 DRRIRVWAKPTGEKRHTLVATLEKHKSAVNALALNDDGSVLFSGSCDRSILVWEREDTSN 314
Query: 373 LHTL-----DHNDIITALCFSPNRYWLCAAFGPSIKIWDLESKEMVEELRPEIINQTQTS 537
+ H+ I +L F+ + L + +++IW L E++ +
Sbjct: 315 YMAVRGALRGHDKAILSL-FNVSDLLLSGSADRTVRIWRRGPDSSYSCL--EVL----SG 367
Query: 538 KTDPPQCLSLAWS---TDGQTLFAGYSDNTIRVWQVSIS 645
T P + L+ D ++ +G D ++ W+VS++
Sbjct: 368 HTKPVKSLAAVREKELDDVVSIISGSLDGEVKCWKVSVT 406
Score = 31.5 bits (68), Expect = 0.62
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQD--DGHSDWV---SCVRFSP 168
H K +LS+ F+V + ++SGS D+T+++W + Y+ + GH+ V + VR
Sbjct: 325 HDKAILSL-FNVSDL-LLSGSADRTVRIWRRGPDSSYSCLEVLSGHTKPVKSLAAVREKE 382
Query: 169 NHANPIIVSCGWDRTVKVWHLTNCK 243
I+S D VK W ++ K
Sbjct: 383 LDDVVSIISGSLDGEVKCWKVSVTK 407
Score = 28.3 bits (60), Expect = 5.8
Identities = 18/74 (24%), Positives = 33/74 (44%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 183
H V ++A + D + SGS D++I +W Y + S + +
Sbjct: 279 HKSAVNALALNDDGSVLFSGSCDRSILVWEREDTSNYMAVRGALRGHDKAI-LSLFNVSD 337
Query: 184 IIVSCGWDRTVKVW 225
+++S DRTV++W
Sbjct: 338 LLLSGSADRTVRIW 351
>At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 825
Score = 53.2 bits (122), Expect = 2e-07
Identities = 32/122 (26%), Positives = 63/122 (51%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 183
H DVL +++S ++ ++S S DKT++LW+ K ++ HSD+V+C++F+P N
Sbjct: 467 HLDDVLDLSWS-KSQHLLSSSMDKTVRLWD--LSSKTCLKVFSHSDYVTCIQFNPVDDN- 522
Query: 184 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 363
+S D V++W + + ++ ++ + +PDG G L++ +D
Sbjct: 523 YFISGSLDAKVRIWSIPDHQV-VDWNDLHEMVTAACYTPDGQGALVGSYKGTCCLYNTHD 581
Query: 364 GK 369
K
Sbjct: 582 NK 583
Score = 50.4 bits (115), Expect = 1e-06
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Frame = +1
Query: 130 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DG 306
GH D V + +S + ++S D+TV++W L++ K + HS Y+ + +P D
Sbjct: 466 GHLDDVLDLSWSKSQH---LLSSSMDKTVRLWDLSS-KTCLKVFSHSDYVTCIQFNPVDD 521
Query: 307 SLCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCFSPN 426
+ SG D K +W + D + + D ++++TA C++P+
Sbjct: 522 NYFISGSLDAKVRIWSIPDHQVVDWNDLHEMVTAACYTPD 561
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 53.2 bits (122), Expect = 2e-07
Identities = 41/163 (25%), Positives = 79/163 (48%), Gaps = 4/163 (2%)
Frame = +1
Query: 1 DHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK-YTIQD-DGHSDWVSCVRFSPNH 174
+HT + + FS ++ + S DKT+++W+ A+ K Y+++ GHS V+ + F P
Sbjct: 691 EHTAMITDIRFSPSQLRLATSSFDKTVRVWD--ADNKGYSLRTFMGHSSMVTSLDFHP-I 747
Query: 175 ANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPD-GSLCASGGKDMKAMLW 351
+ +I SC D ++ W + N + G S + P G A+ ++ +L
Sbjct: 748 KDDLICSCDNDNEIRYWSINNGSCTRVYKGGS---TQIRFQPRVGKYLAASSANLVNVL- 803
Query: 352 DLNDGKHLHTLD-HNDIITALCFSPNRYWLCAAFGPSIKIWDL 477
D+ H+L H + I ++C+ P+ +L + +K+W L
Sbjct: 804 DVETQAIRHSLQGHANPINSVCWDPSGDFLASVSEDMVKVWTL 846
Score = 48.8 bits (111), Expect = 4e-06
Identities = 25/66 (37%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Frame = +1
Query: 295 SPDGSLCASGGKDMKAMLWDLNDGKHLHTL-DHNDIITALCFSPNRYWLC-AAFGPSIKI 468
S DG + AS G D KA+LW + K TL +H +IT + FSP++ L ++F ++++
Sbjct: 660 SSDGKMLASAGHDKKAVLWYTDTMKPKTTLEEHTAMITDIRFSPSQLRLATSSFDKTVRV 719
Query: 469 WDLESK 486
WD ++K
Sbjct: 720 WDADNK 725
Score = 39.1 bits (87), Expect = 0.003
Identities = 29/120 (24%), Positives = 57/120 (47%), Gaps = 4/120 (3%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN----TLAECKYTIQDDGHSDWVSCVRFSPN 171
H + SV + + S S D +K+W + EC + + +G+ + SCV F P
Sbjct: 817 HANPINSVCWDPSGDFLASVSEDM-VKVWTLGTGSEGECVHELSCNGNK-FQSCV-FHPA 873
Query: 172 HANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 351
+ + +++ C +++++W+++ K + H G + ++ VS L AS D LW
Sbjct: 874 YPSLLVIGCY--QSLELWNMSENKT-MTLPAHEGLITSLAVSTATGLVASASHDKLVKLW 930
>At3g05090.2 68416.m00553 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 53.2 bits (122), Expect = 2e-07
Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 3/118 (2%)
Frame = +1
Query: 13 DVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKY-TIQDDGHSDWVSCVRFSPNHANPII 189
DVL + S D + +GSRD T+K W + + + + H DWV+ + +
Sbjct: 42 DVLKSSVSNDQSYLFTGSRDGTLKRWAFDEDATFCSATFESHVDWVNDAALA---GESTL 98
Query: 190 VSCGWDRTVKVWH-LTNCKLKINHLGHSGYLNTVTV-SPDGSLCASGGKDMKAMLWDL 357
VSC D TVK W L++ HS Y+ + V + + ++ ASGG + +WD+
Sbjct: 99 VSCSSDTTVKTWDGLSDGVCTRTLRQHSDYVTCLAVAAKNNNVVASGGLGGEVFIWDI 156
Score = 51.2 bits (117), Expect = 7e-07
Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Frame = +1
Query: 130 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 309
GH + S + N ++VS G ++ ++VW + GH+ + + + G
Sbjct: 211 GHKE--SVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGR 268
Query: 310 LCASGGKDMKAMLWDLNDGKHLHTLD-HNDIITALCFSPN 426
C SG D LWDL + LHT H D + AL +P+
Sbjct: 269 FCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPS 308
Score = 45.2 bits (102), Expect = 5e-05
Identities = 35/159 (22%), Positives = 67/159 (42%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 183
H + V ++A + +VSG +K +++W+ K +++ GH+D V + +
Sbjct: 212 HKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSK-SMKLRGHTDNVRVLLL--DSTGR 268
Query: 184 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 363
+S D +++W L + + H+ + + +P S SGG+D L DL
Sbjct: 269 FCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFSHVYSGGRDQCLYLTDLAT 328
Query: 364 GKHLHTLDHNDIITALCFSPNRYWLCAAFGPSIKIWDLE 480
+ + I L N W+ A S++ W E
Sbjct: 329 RESVLLCTKEHPIQQLALQDNSIWV-ATTDSSVERWPAE 366
>At3g05090.1 68416.m00552 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 53.2 bits (122), Expect = 2e-07
Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 3/118 (2%)
Frame = +1
Query: 13 DVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKY-TIQDDGHSDWVSCVRFSPNHANPII 189
DVL + S D + +GSRD T+K W + + + + H DWV+ + +
Sbjct: 42 DVLKSSVSNDQSYLFTGSRDGTLKRWAFDEDATFCSATFESHVDWVNDAALA---GESTL 98
Query: 190 VSCGWDRTVKVWH-LTNCKLKINHLGHSGYLNTVTV-SPDGSLCASGGKDMKAMLWDL 357
VSC D TVK W L++ HS Y+ + V + + ++ ASGG + +WD+
Sbjct: 99 VSCSSDTTVKTWDGLSDGVCTRTLRQHSDYVTCLAVAAKNNNVVASGGLGGEVFIWDI 156
Score = 51.2 bits (117), Expect = 7e-07
Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Frame = +1
Query: 130 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 309
GH + S + N ++VS G ++ ++VW + GH+ + + + G
Sbjct: 211 GHKE--SVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGR 268
Query: 310 LCASGGKDMKAMLWDLNDGKHLHTLD-HNDIITALCFSPN 426
C SG D LWDL + LHT H D + AL +P+
Sbjct: 269 FCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPS 308
Score = 45.2 bits (102), Expect = 5e-05
Identities = 35/159 (22%), Positives = 67/159 (42%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 183
H + V ++A + +VSG +K +++W+ K +++ GH+D V + +
Sbjct: 212 HKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSK-SMKLRGHTDNVRVLLL--DSTGR 268
Query: 184 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 363
+S D +++W L + + H+ + + +P S SGG+D L DL
Sbjct: 269 FCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFSHVYSGGRDQCLYLTDLAT 328
Query: 364 GKHLHTLDHNDIITALCFSPNRYWLCAAFGPSIKIWDLE 480
+ + I L N W+ A S++ W E
Sbjct: 329 RESVLLCTKEHPIQQLALQDNSIWV-ATTDSSVERWPAE 366
>At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]; similar to rab11 binding protein GI:4512103
from [Bos taurus]
Length = 593
Score = 53.2 bits (122), Expect = 2e-07
Identities = 28/77 (36%), Positives = 46/77 (59%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 183
HT DVL +A+S D+ ++S S+DKT++LW T C + H+++V+CV F+P + N
Sbjct: 271 HTGDVLDLAWS-DSNLLLSASKDKTVRLWRT--GCDQCLHVFHHNNYVTCVEFNPVNKNN 327
Query: 184 IIVSCGWDRTVKVWHLT 234
S D ++W L+
Sbjct: 328 -FASGSIDGKARIWGLS 343
Score = 48.0 bits (109), Expect = 7e-06
Identities = 25/82 (30%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Frame = +1
Query: 184 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAMLWDLN 360
+++S D+TV++W T C ++ H+ Y+ V +P + + ASG D KA +W L+
Sbjct: 285 LLLSASKDKTVRLWR-TGCDQCLHVFHHNNYVTCVEFNPVNKNNFASGSIDGKARIWGLS 343
Query: 361 DGKHLHTLDHNDIITALCFSPN 426
+ + + D D I+A+ + PN
Sbjct: 344 EERVVAWTDVRDSISAISYQPN 365
Score = 42.3 bits (95), Expect = 3e-04
Identities = 36/166 (21%), Positives = 70/166 (42%), Gaps = 2/166 (1%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 183
H + ++ FS D + + +G D +K+W + T+ D + ++ + P +
Sbjct: 197 HKGKIWTLKFSPDGKYLATGGEDGVVKIW------RITLSDSLLASFLR--QQEPINQQA 248
Query: 184 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 363
+V K +H+ + + GH+G + + S D +L S KD LW
Sbjct: 249 ALVLF----PQKAFHIEETPFQELY-GHTGDVLDLAWS-DSNLLLSASKDKTVRLWRTGC 302
Query: 364 GKHLHTLDHNDIITALCFSP--NRYWLCAAFGPSIKIWDLESKEMV 495
+ LH HN+ +T + F+P + + +IW L + +V
Sbjct: 303 DQCLHVFHHNNYVTCVEFNPVNKNNFASGSIDGKARIWGLSEERVV 348
Score = 33.9 bits (74), Expect = 0.12
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +1
Query: 247 KINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 351
KIN GH G + T+ SPDG A+GG+D +W
Sbjct: 193 KIN--GHKGKIWTLKFSPDGKYLATGGEDGVVKIW 225
Score = 28.3 bits (60), Expect = 5.8
Identities = 9/28 (32%), Positives = 19/28 (67%)
Frame = +1
Query: 562 SLAWSTDGQTLFAGYSDNTIRVWQVSIS 645
+L +S DG+ L G D +++W++++S
Sbjct: 203 TLKFSPDGKYLATGGEDGVVKIWRITLS 230
>At1g15440.2 68414.m01856 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 860
Score = 52.4 bits (120), Expect = 3e-07
Identities = 42/140 (30%), Positives = 63/140 (45%), Gaps = 3/140 (2%)
Frame = +1
Query: 220 VWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL-DHND 396
VW + GH +N VT SPD L A+G D K +W++ G T +H +
Sbjct: 333 VWDWRTETYILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTN 392
Query: 397 IITALCF-SPNRYWLCAAFGPSIKIWDLESKEMVEELRPEIINQTQTSKTDPPQCLSLAW 573
+TAL F + N L A+ +++ WD + + +T T+ T P Q +SL
Sbjct: 393 AVTALHFMADNHSLLSASLDGTVRAWDFKRYKNY---------KTYTTPT-PRQFVSLTA 442
Query: 574 STDGQTLFAGYSDN-TIRVW 630
G + AG D+ I VW
Sbjct: 443 DPSGDVVCAGTLDSFEIFVW 462
Score = 48.8 bits (111), Expect = 4e-06
Identities = 40/162 (24%), Positives = 68/162 (41%), Gaps = 4/162 (2%)
Frame = +1
Query: 1 DHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKY-TIQDDGHSDWVSCVRFSPNHA 177
+HT V ++ F DN ++S S D T++ W+ Y T +VS + + +
Sbjct: 389 EHTNAVTALHFMADNHSLLSASLDGTVRAWDFKRYKNYKTYTTPTPRQFVS---LTADPS 445
Query: 178 NPIIVSCGWDR-TVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 354
++ + D + VW ++K GH ++ + SP L AS D LWD
Sbjct: 446 GDVVCAGTLDSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWD 505
Query: 355 LNDGK-HLHTLDHNDIITALCFSPNRYWLCAA-FGPSIKIWD 474
+ K + T HN + + F P+ L ++ I WD
Sbjct: 506 VFASKGTVETFRHNHDVLTVAFRPDGKQLASSTLDGQINFWD 547
Score = 47.6 bits (108), Expect = 9e-06
Identities = 26/86 (30%), Positives = 41/86 (47%)
Frame = +1
Query: 130 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 309
GH V + FSP ++ S WD TV++W + K + H+ + TV PDG
Sbjct: 475 GHEAPVHGLMFSP--LTQLLASSSWDYTVRLWDVFASKGTVETFRHNHDVLTVAFRPDGK 532
Query: 310 LCASGGKDMKAMLWDLNDGKHLHTLD 387
AS D + WD +G ++T++
Sbjct: 533 QLASSTLDGQINFWDTIEGVLMYTIE 558
Score = 44.4 bits (100), Expect = 8e-05
Identities = 29/115 (25%), Positives = 49/115 (42%)
Frame = +1
Query: 295 SPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCFSPNRYWLCAAFGPSIKIWD 474
SPDG+ + + + + +L LH + D + AL FSPN ++ G ++IW
Sbjct: 61 SPDGTFLLAVDEQNRCLFINLPRRVVLHRITFKDKVGALKFSPNGKFIAVGIGKLVEIW- 119
Query: 475 LESKEMVEELRPEIINQTQTSKTDPPQCLSLAWSTDGQTLFAGYSDNTIRVWQVS 639
S + P + +T + +SL WS D L G D R + ++
Sbjct: 120 -RSPGFRRAVLP--FERVRTFANSDDKVVSLEWSLDSDYLLVGSRDLAARAFTIA 171
Score = 37.9 bits (84), Expect = 0.007
Identities = 24/99 (24%), Positives = 42/99 (42%)
Frame = +1
Query: 85 LWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLG 264
+W+ E Y ++ GH V+CV +SP+ + ++ + D VKVW++ + I
Sbjct: 333 VWDWRTET-YILKQQGHYFDVNCVTYSPD--SQLLATGADDNKVKVWNVMSGTCFITFTE 389
Query: 265 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHT 381
H+ + + D S D WD K+ T
Sbjct: 390 HTNAVTALHFMADNHSLLSASLDGTVRAWDFKRYKNYKT 428
Score = 36.3 bits (80), Expect = 0.022
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL-AECKYTIQ 123
H DVL+VAF D +Q+ S + D I W+T+ YTI+
Sbjct: 518 HNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEGVLMYTIE 558
Score = 28.7 bits (61), Expect = 4.4
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 3/92 (3%)
Frame = +1
Query: 370 HLHTLDHNDIITALCFSPNRYWL---CAAFGPSIKIWDLESKEMVEELRPEIINQTQTSK 540
HL ++ + TA+ F+ WL CA G + +WD ++ + + + +
Sbjct: 300 HLLSISRQKLTTAV-FNERGNWLTFGCAKLG-QLLVWDWRTETYILKQQGHYFDVN---- 353
Query: 541 TDPPQCLSLAWSTDGQTLFAGYSDNTIRVWQV 636
C++ +S D Q L G DN ++VW V
Sbjct: 354 -----CVT--YSPDSQLLATGADDNKVKVWNV 378
>At1g15440.1 68414.m01855 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 900
Score = 52.4 bits (120), Expect = 3e-07
Identities = 42/140 (30%), Positives = 63/140 (45%), Gaps = 3/140 (2%)
Frame = +1
Query: 220 VWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL-DHND 396
VW + GH +N VT SPD L A+G D K +W++ G T +H +
Sbjct: 373 VWDWRTETYILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTN 432
Query: 397 IITALCF-SPNRYWLCAAFGPSIKIWDLESKEMVEELRPEIINQTQTSKTDPPQCLSLAW 573
+TAL F + N L A+ +++ WD + + +T T+ T P Q +SL
Sbjct: 433 AVTALHFMADNHSLLSASLDGTVRAWDFKRYKNY---------KTYTTPT-PRQFVSLTA 482
Query: 574 STDGQTLFAGYSDN-TIRVW 630
G + AG D+ I VW
Sbjct: 483 DPSGDVVCAGTLDSFEIFVW 502
Score = 48.8 bits (111), Expect = 4e-06
Identities = 40/162 (24%), Positives = 68/162 (41%), Gaps = 4/162 (2%)
Frame = +1
Query: 1 DHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKY-TIQDDGHSDWVSCVRFSPNHA 177
+HT V ++ F DN ++S S D T++ W+ Y T +VS + + +
Sbjct: 429 EHTNAVTALHFMADNHSLLSASLDGTVRAWDFKRYKNYKTYTTPTPRQFVS---LTADPS 485
Query: 178 NPIIVSCGWDR-TVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 354
++ + D + VW ++K GH ++ + SP L AS D LWD
Sbjct: 486 GDVVCAGTLDSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWD 545
Query: 355 LNDGK-HLHTLDHNDIITALCFSPNRYWLCAA-FGPSIKIWD 474
+ K + T HN + + F P+ L ++ I WD
Sbjct: 546 VFASKGTVETFRHNHDVLTVAFRPDGKQLASSTLDGQINFWD 587
Score = 47.6 bits (108), Expect = 9e-06
Identities = 26/86 (30%), Positives = 41/86 (47%)
Frame = +1
Query: 130 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 309
GH V + FSP ++ S WD TV++W + K + H+ + TV PDG
Sbjct: 515 GHEAPVHGLMFSP--LTQLLASSSWDYTVRLWDVFASKGTVETFRHNHDVLTVAFRPDGK 572
Query: 310 LCASGGKDMKAMLWDLNDGKHLHTLD 387
AS D + WD +G ++T++
Sbjct: 573 QLASSTLDGQINFWDTIEGVLMYTIE 598
Score = 44.0 bits (99), Expect = 1e-04
Identities = 30/114 (26%), Positives = 49/114 (42%)
Frame = +1
Query: 295 SPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCFSPNRYWLCAAFGPSIKIWD 474
SPDG+ + + + + +L LH + D + AL FSPN ++ G ++IW
Sbjct: 61 SPDGTFLLAVDEQNRCLFINLPRRVVLHRITFKDKVGALKFSPNGKFIAVGIGKLVEIW- 119
Query: 475 LESKEMVEELRPEIINQTQTSKTDPPQCLSLAWSTDGQTLFAGYSDNTIRVWQV 636
S + P + +T + +SL WS D L G D R++ V
Sbjct: 120 -RSPGFRRAVLP--FERVRTFANSDDKVVSLEWSLDSDYLLVGSRDLAARLFCV 170
Score = 37.9 bits (84), Expect = 0.007
Identities = 24/99 (24%), Positives = 42/99 (42%)
Frame = +1
Query: 85 LWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLG 264
+W+ E Y ++ GH V+CV +SP+ + ++ + D VKVW++ + I
Sbjct: 373 VWDWRTET-YILKQQGHYFDVNCVTYSPD--SQLLATGADDNKVKVWNVMSGTCFITFTE 429
Query: 265 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHT 381
H+ + + D S D WD K+ T
Sbjct: 430 HTNAVTALHFMADNHSLLSASLDGTVRAWDFKRYKNYKT 468
Score = 36.3 bits (80), Expect = 0.022
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL-AECKYTIQ 123
H DVL+VAF D +Q+ S + D I W+T+ YTI+
Sbjct: 558 HNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEGVLMYTIE 598
Score = 28.7 bits (61), Expect = 4.4
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 3/92 (3%)
Frame = +1
Query: 370 HLHTLDHNDIITALCFSPNRYWL---CAAFGPSIKIWDLESKEMVEELRPEIINQTQTSK 540
HL ++ + TA+ F+ WL CA G + +WD ++ + + + +
Sbjct: 340 HLLSISRQKLTTAV-FNERGNWLTFGCAKLG-QLLVWDWRTETYILKQQGHYFDVN---- 393
Query: 541 TDPPQCLSLAWSTDGQTLFAGYSDNTIRVWQV 636
C++ +S D Q L G DN ++VW V
Sbjct: 394 -----CVT--YSPDSQLLATGADDNKVKVWNV 418
>At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 WD-40
repeats (PF00400); similiar to rab11 binding protein
(GI:4512103) [Bos taurus]
Length = 903
Score = 52.0 bits (119), Expect = 4e-07
Identities = 46/214 (21%), Positives = 97/214 (45%), Gaps = 4/214 (1%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 183
H +L +++S ++ ++S S DKT++LW+ E K ++ H+D+V+C++FSP N
Sbjct: 505 HLDAILDLSWS-KSQLLLSSSMDKTVRLWDI--ETKTCLKLFAHNDYVTCIQFSPVDEN- 560
Query: 184 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 363
+S D +++W + + + + + +PDG G +D D
Sbjct: 561 YFLSGSLDAKIRIWSIQD-RHVVEWSDLHEMVTAACYTPDGQGALIGSHKGICRAYDTED 619
Query: 364 GKHLHTLDHNDIITALCFSPNRYWLCAAFGP----SIKIWDLESKEMVEELRPEIINQTQ 531
K L + D+ + R F P + + +S+ + + E+I++ +
Sbjct: 620 CK-LSQTNQIDVQSNKKSQAKRKITSFQFSPVNPSEVLVTSADSRIRILD-GSEVIHKFK 677
Query: 532 TSKTDPPQCLSLAWSTDGQTLFAGYSDNTIRVWQ 633
+ Q LS ++S DG+ + D+ + +W+
Sbjct: 678 GFRNTCSQ-LSASYSQDGKYIICASEDSQVYLWK 710
Score = 50.0 bits (114), Expect = 2e-06
Identities = 26/100 (26%), Positives = 52/100 (52%), Gaps = 1/100 (1%)
Frame = +1
Query: 130 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DG 306
GH D + + +S + +++S D+TV++W + K + H+ Y+ + SP D
Sbjct: 504 GHLDAILDLSWSKSQ---LLLSSSMDKTVRLWDIET-KTCLKLFAHNDYVTCIQFSPVDE 559
Query: 307 SLCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCFSPN 426
+ SG D K +W + D + D ++++TA C++P+
Sbjct: 560 NYFLSGSLDAKIRIWSIQDRHVVEWSDLHEMVTAACYTPD 599
Score = 35.5 bits (78), Expect = 0.038
Identities = 35/140 (25%), Positives = 61/140 (43%), Gaps = 16/140 (11%)
Frame = +1
Query: 265 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCFSPNRYWLCA 444
H G + T+ S D ASGG D +W++ + + L +++ + +P LC
Sbjct: 403 HEGAVWTIKFSQDAHYLASGGADRVIHVWEVQECE-LMSMNEGSL------TPIHPSLCD 455
Query: 445 AFGPSIKIWDLESKEMVEELR-----PEIINQTQT--SKTDPPQC---------LSLAWS 576
+ G I + + + K R P+ ++ +T S +D P C L L+WS
Sbjct: 456 SSGNEITVVEKKKKGKGSSGRRHNHIPDYVHVPETVFSFSDKPVCSLKGHLDAILDLSWS 515
Query: 577 TDGQTLFAGYSDNTIRVWQV 636
Q L + D T+R+W +
Sbjct: 516 -KSQLLLSSSMDKTVRLWDI 534
Score = 28.3 bits (60), Expect = 5.8
Identities = 18/83 (21%), Positives = 37/83 (44%)
Frame = +1
Query: 388 HNDIITALCFSPNRYWLCAAFGPSIKIWDLESKEMVEELRPEIINQTQTSKTDPPQCLSL 567
H D I L +S ++ L ++ ++++WD+E+K ++ + D C+
Sbjct: 505 HLDAILDLSWSKSQLLLSSSMDKTVRLWDIETKTCLKLF----------AHNDYVTCIQF 554
Query: 568 AWSTDGQTLFAGYSDNTIRVWQV 636
+ D +G D IR+W +
Sbjct: 555 S-PVDENYFLSGSLDAKIRIWSI 576
>At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 1187
Score = 52.0 bits (119), Expect = 4e-07
Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 1/120 (0%)
Frame = +1
Query: 28 AFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWD 207
A S D +IVSGS D ++ +W+ + + GH VSCV+ +++ D
Sbjct: 904 AISSDRGKIVSGSDDLSVIVWDKQTT-QLLEELKGHDSQVSCVKMLSGER---VLTAAHD 959
Query: 208 RTVKVWHLTNCKLKINHLGH-SGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL 384
TVK+W + + + +G S + ++ + A+ G+D A +WD+ GK +H L
Sbjct: 960 GTVKMWDVRT-DMCVATVGRCSSAILSLEYDDSTGILAAAGRDTVANIWDIRSGKQMHKL 1018
Score = 36.3 bits (80), Expect = 0.022
Identities = 23/117 (19%), Positives = 48/117 (41%)
Frame = +1
Query: 16 VLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVS 195
+LS+ + + + RD +W+ + K + GH+ W+ +R +++
Sbjct: 983 ILSLEYDDSTGILAAAGRDTVANIWD-IRSGKQMHKLKGHTKWIRSIRM----VEDTLIT 1037
Query: 196 CGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 366
D T +VW ++ H+G + +V SP +G D W+ ++G
Sbjct: 1038 GSDDWTARVWSVSRGSCDAVLACHAGPVQSVEYSPFDKGIITGSADGLLRFWENDEG 1094
Score = 34.3 bits (75), Expect = 0.088
Identities = 20/111 (18%), Positives = 51/111 (45%), Gaps = 1/111 (0%)
Frame = +1
Query: 37 VDNRQIVSGSRDKTIKLWNTLAE-CKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRT 213
+ ++++ + D T+K+W+ + C T+ G + + + + I+ + G D
Sbjct: 948 LSGERVLTAAHDGTVKMWDVRTDMCVATV---GRCS-SAILSLEYDDSTGILAAAGRDTV 1003
Query: 214 VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 366
+W + + K GH+ ++ ++ + D + +G D A +W ++ G
Sbjct: 1004 ANIWDIRSGKQMHKLKGHTKWIRSIRMVEDTLI--TGSDDWTARVWSVSRG 1052
Score = 28.3 bits (60), Expect = 5.8
Identities = 25/114 (21%), Positives = 47/114 (41%), Gaps = 2/114 (1%)
Frame = +1
Query: 301 DGSLCASGGKDMKAMLWDLN-DGKHLHTLDHNDIITALCFSPNRYWLCAAFGP-SIKIWD 474
D SG D +WD + G L T S +R + + S+ +WD
Sbjct: 866 DAGFFISGSTDCLVKIWDPSLRGSELRATLKGHTGTVRAISSDRGKIVSGSDDLSVIVWD 925
Query: 475 LESKEMVEELRPEIINQTQTSKTDPPQCLSLAWSTDGQTLFAGYSDNTIRVWQV 636
++ +++EEL+ + +Q S C+ + G+ + D T+++W V
Sbjct: 926 KQTTQLLEELKG---HDSQVS------CVKM---LSGERVLTAAHDGTVKMWDV 967
>At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 52.0 bits (119), Expect = 4e-07
Identities = 45/175 (25%), Positives = 81/175 (46%), Gaps = 11/175 (6%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQ--IVSGSRDKTIKLWNTLAECK-YTIQDDGHSDWVSCVRFSPNH 174
H V ++FS N+Q +++ DKTIK+W+ K +T + + C + N
Sbjct: 461 HVGGVNDISFSTPNKQLCVITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSVCPHYKENI 520
Query: 175 ANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGG--KDMKAML 348
I S D +K W N ++++ + T+ S DG+ S G KD ++ +
Sbjct: 521 Q--FIFSTALDGKIKAWLYDNMGSRVDYDAPGRWCTTMAYSADGTRLFSCGTSKDGESFI 578
Query: 349 --WDLNDG--KHLHTLDHNDIITALCF--SPNRYWLCAAFGPSIKIWDLESKEMV 495
W+ ++G K + H + + F + NRY L A SIK WD+++ +++
Sbjct: 579 VEWNESEGAVKRTYQGFHKRSLGVVQFDTTKNRY-LAAGDDFSIKFWDMDAVQLL 632
Score = 33.1 bits (72), Expect = 0.20
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +1
Query: 118 IQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTV 288
++ D H V+ + FS + +++CG D+T+KVW + GH + +V
Sbjct: 456 LEIDAHVGGVNDISFSTPNKQLCVITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSV 512
>At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 52.0 bits (119), Expect = 4e-07
Identities = 45/175 (25%), Positives = 81/175 (46%), Gaps = 11/175 (6%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQ--IVSGSRDKTIKLWNTLAECK-YTIQDDGHSDWVSCVRFSPNH 174
H V ++FS N+Q +++ DKTIK+W+ K +T + + C + N
Sbjct: 461 HVGGVNDISFSTPNKQLCVITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSVCPHYKENI 520
Query: 175 ANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGG--KDMKAML 348
I S D +K W N ++++ + T+ S DG+ S G KD ++ +
Sbjct: 521 Q--FIFSTALDGKIKAWLYDNMGSRVDYDAPGRWCTTMAYSADGTRLFSCGTSKDGESFI 578
Query: 349 --WDLNDG--KHLHTLDHNDIITALCF--SPNRYWLCAAFGPSIKIWDLESKEMV 495
W+ ++G K + H + + F + NRY L A SIK WD+++ +++
Sbjct: 579 VEWNESEGAVKRTYQGFHKRSLGVVQFDTTKNRY-LAAGDDFSIKFWDMDAVQLL 632
Score = 33.1 bits (72), Expect = 0.20
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +1
Query: 118 IQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTV 288
++ D H V+ + FS + +++CG D+T+KVW + GH + +V
Sbjct: 456 LEIDAHVGGVNDISFSTPNKQLCVITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSV 512
>At2g26490.1 68415.m03178 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
related to En/Spm transposon family of maize
Length = 465
Score = 51.6 bits (118), Expect = 5e-07
Identities = 52/177 (29%), Positives = 75/177 (42%), Gaps = 10/177 (5%)
Frame = +1
Query: 133 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSL 312
H+D VSC+ S N ++ S WDRT+KVW + + K + H +N+V VS ++
Sbjct: 205 HADAVSCL--SLNDEQGLLYSASWDRTIKVWRIADSKCLESIPAHDDAVNSV-VSTTEAI 261
Query: 313 CASGGKDMKAMLWDLN-DGKHL-HTL-----DHNDIITALCFSPNRYWLCAAFGPS---I 462
SG D W + GK+ HTL +TAL S N FG S +
Sbjct: 262 VFSGSADGTVKAWKRDQQGKYTKHTLMQTLTKQESAVTALAVSKN--GAAVYFGSSDGLV 319
Query: 463 KIWDLESKEMVEELRPEIINQTQTSKTDPPQCLSLAWSTDGQTLFAGYSDNTIRVWQ 633
W+ E + +N K L L G +F+G +D TI VW+
Sbjct: 320 NFWEREKQ----------LNYGGILKGHKLAVLCL--EVAGSLVFSGSADKTICVWK 364
Score = 31.9 bits (69), Expect = 0.47
Identities = 24/74 (32%), Positives = 35/74 (47%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 183
H V ++ + + + S S D+TIK+W +A+ K H D V+ V S A
Sbjct: 205 HADAVSCLSLNDEQGLLYSASWDRTIKVWR-IADSKCLESIPAHDDAVNSV-VSTTEA-- 260
Query: 184 IIVSCGWDRTVKVW 225
I+ S D TVK W
Sbjct: 261 IVFSGSADGTVKAW 274
Score = 28.7 bits (61), Expect = 4.4
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +1
Query: 583 GQTLFAGYSDNTIRVWQVS 639
G+ +F G+ D IRVW+VS
Sbjct: 144 GEKIFTGHQDGKIRVWKVS 162
Score = 28.3 bits (60), Expect = 5.8
Identities = 33/128 (25%), Positives = 47/128 (36%), Gaps = 5/128 (3%)
Frame = +1
Query: 13 DVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQD-----DGHSDWVSCVRFSPNHA 177
D ++ S + SGS D T+K W + KYT V+ + S N A
Sbjct: 249 DAVNSVVSTTEAIVFSGSADGTVKAWKRDQQGKYTKHTLMQTLTKQESAVTALAVSKNGA 308
Query: 178 NPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 357
S D V W +L + L + + GSL SG D +W
Sbjct: 309 AVYFGSS--DGLVNFWEREK-QLNYGGILKGHKLAVLCLEVAGSLVFSGSADKTICVWK- 364
Query: 358 NDGKHLHT 381
DG ++HT
Sbjct: 365 RDG-NIHT 371
>At2g01330.1 68415.m00050 transducin family protein / WD-40 repeat
family protein contains 10 WD-40 repeats (PF00400);
similar to 66kDa stress protein (SWISS-PROT: P90587)[
Physarum polycephalum (Slime mold)]
Length = 474
Score = 51.2 bits (117), Expect = 7e-07
Identities = 36/122 (29%), Positives = 55/122 (45%), Gaps = 5/122 (4%)
Frame = +1
Query: 127 DGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDG 306
DGHS V F P I +CG D V + K +H HS ++N + SPDG
Sbjct: 5 DGHSRRVLSCAFKPTRPFRI-ATCGEDFLVNFYDGPPFKFHSSHREHSNFVNCIRYSPDG 63
Query: 307 SLCASGGKDMKAMLWDLNDGKHLHTL----DHNDIITALCFSP-NRYWLCAAFGPSIKIW 471
+ + D K M++D G + L H I A+ +SP ++ L + S K+W
Sbjct: 64 TKFITVSSDKKGMIYDGKTGDKVGELASEDGHKGSIYAVSWSPDSKRVLTVSADKSAKVW 123
Query: 472 DL 477
++
Sbjct: 124 EV 125
Score = 35.9 bits (79), Expect = 0.029
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = +1
Query: 265 HSGYLNTVTVSPDGSLCASGGKDMKAMLWD--LNDGKHLHTLDHNDIITALCFSPN 426
H G L + SPD ++ ASG + +A++WD K + L H I +L +SPN
Sbjct: 355 HRGALTVIRYSPDLTMFASGDANREAVVWDRETKQVKLNNMLFHTARINSLAWSPN 410
Score = 33.9 bits (74), Expect = 0.12
Identities = 29/120 (24%), Positives = 56/120 (46%), Gaps = 5/120 (4%)
Frame = +1
Query: 292 VSPDGSLCASGGKDMKAMLWDL---NDGKHLHTLD-HNDIITALCFSPNRYWLCAA-FGP 456
+SPDG GG+D K ++ + N+ K L+ H +T + +SP+ +
Sbjct: 319 ISPDGKEAIVGGQDGKLHIYSVSGDNNLKEEAVLEKHRGALTVIRYSPDLTMFASGDANR 378
Query: 457 SIKIWDLESKEMVEELRPEIINQTQTSKTDPPQCLSLAWSTDGQTLFAGYSDNTIRVWQV 636
+WD E+K++ +L + + + + SLAWS + + + G D + V++V
Sbjct: 379 EAVVWDRETKQV--KLNNMLFHTARIN--------SLAWSPNNKMVATGSIDTCVIVYEV 428
Score = 27.9 bits (59), Expect = 7.7
Identities = 9/29 (31%), Positives = 21/29 (72%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLW 90
H + +V++S D++++++ S DK+ K+W
Sbjct: 95 HKGSIYAVSWSPDSKRVLTVSADKSAKVW 123
>At1g15470.1 68414.m01860 transducin family protein / WD-40 repeat
family protein Strong similarity to gb AF096285
serine-threonine kinase receptor-associated protein from
Mus musculus and contains 5 PF|00400 WD40, G-beta repeat
domains. EST gb|F14050 comes from this gene
Length = 333
Score = 51.2 bits (117), Expect = 7e-07
Identities = 39/162 (24%), Positives = 73/162 (45%), Gaps = 2/162 (1%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 183
H V S + + + S S D T K+WN L + + H V FS +
Sbjct: 55 HKGAVWSCSLDKNAIRAASASADFTAKIWNALTGDE--LHSFEHKHIVRACAFSEDTHR- 111
Query: 184 IIVSCGWDRTVKVWHLTNCKLKINHLGHS-GYLNTVT-VSPDGSLCASGGKDMKAMLWDL 357
+++ G ++ ++++ L +G+S G + TV + D ++ +S LWD+
Sbjct: 112 -LLTGGMEKILRIFDLNRPDAPPKEVGNSPGSIRTVEWLHSDNTILSSCTDTGDIRLWDI 170
Query: 358 NDGKHLHTLDHNDIITALCFSPNRYWLCAAFGPSIKIWDLES 483
K +HTL+ +T+ S + ++ A G S+K WD ++
Sbjct: 171 RSDKIVHTLETKSPVTSAEVSQDGRYITTADGSSVKFWDAKN 212
Score = 40.7 bits (91), Expect = 0.001
Identities = 29/127 (22%), Positives = 53/127 (41%), Gaps = 2/127 (1%)
Frame = +1
Query: 262 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCFSPNRY-WL 438
GH G + + ++ + AS D A +W+ G LH+ +H I+ A FS + + L
Sbjct: 54 GHKGAVWSCSLDKNAIRAASASADFTAKIWNALTGDELHSFEHKHIVRACAFSEDTHRLL 113
Query: 439 CAAFGPSIKIWDLESKEMVEELRPEIINQTQTSKTDPPQCLSLAWSTDGQTLFAGYSD-N 615
++I+DL RP+ + P ++ W T+ + +D
Sbjct: 114 TGGMEKILRIFDLN--------RPDA--PPKEVGNSPGSIRTVEWLHSDNTILSSCTDTG 163
Query: 616 TIRVWQV 636
IR+W +
Sbjct: 164 DIRLWDI 170
Score = 29.5 bits (63), Expect = 2.5
Identities = 30/120 (25%), Positives = 46/120 (38%), Gaps = 1/120 (0%)
Frame = +1
Query: 16 VLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVS 195
V S S D R I + ++K W+ A+ ++ V P H N I
Sbjct: 185 VTSAEVSQDGRYITTAD-GSSVKFWD--AKNFGLLKSYDMPCNVESASLEPKHGNTFIAG 241
Query: 196 CGWDRTVKVWHL-TNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKH 372
G D V + T ++ N GH G ++ V +P G SG +D +W + H
Sbjct: 242 -GEDMWVHRFDFQTGEEIGCNK-GHHGPVHCVRYAPGGESYTSGSEDGTVRIWVVGSVNH 299
>At5g08560.1 68418.m01018 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 589
Score = 50.8 bits (116), Expect = 9e-07
Identities = 36/161 (22%), Positives = 77/161 (47%), Gaps = 2/161 (1%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT-LAECKYTIQDDGHSDWVSCVRFSPNHAN 180
H K V+++ +S D+RQ+++ ++ I+ W+ +C + + G S +SC +
Sbjct: 318 HHKPVIAILWSPDDRQVLTCGAEEVIRRWDVDSGDCVHMYEKGGISP-ISCGWYPDGQG- 375
Query: 181 PIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLN 360
I++ DR++ +W L + + + ++ + ++ DG S KD L+D
Sbjct: 376 --IIAGMTDRSICMWDLDGREKECWKGQRTQKVSDIAMTDDGKWLVSVCKDSVISLFD-R 432
Query: 361 DGKHLHTLDHNDIITALCFS-PNRYWLCAAFGPSIKIWDLE 480
+ ++ D+IT+ S N+Y L I++W++E
Sbjct: 433 EATVERLIEEEDMITSFSLSNDNKYILVNLLNQEIRLWNIE 473
Score = 50.4 bits (115), Expect = 1e-06
Identities = 33/117 (28%), Positives = 53/117 (45%), Gaps = 2/117 (1%)
Frame = +1
Query: 16 VLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFS-PNHANPIIV 192
+ S + S DN+ I+ ++ I+LWN + K + GH +R + I
Sbjct: 446 ITSFSLSNDNKYILVNLLNQEIRLWNIEGDPKIVSRYKGHKRSRFIIRSCFGGYKQAFIA 505
Query: 193 SCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDG-SLCASGGKDMKAMLWDLN 360
S D V +WH + KL + GH+G +N V+ SP + AS D +W L+
Sbjct: 506 SGSEDSQVYIWHRSTGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTIRIWGLD 562
Score = 50.0 bits (114), Expect = 2e-06
Identities = 40/175 (22%), Positives = 82/175 (46%), Gaps = 9/175 (5%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDD--GHSDWVSCVRFSPNHA 177
HT +V + FS + + + S S+D+T +W A+ +++ GH V + +SP+
Sbjct: 273 HTDEVWFLQFSHNGKYLASSSKDQTAIIWEISADGHISLKHTLVGHHKPVIAILWSPDDR 332
Query: 178 NPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVS--PDGSLCASGGKDMKAMLW 351
+++CG + ++ W + + H+ G ++ ++ PDG +G D +W
Sbjct: 333 Q--VLTCGAEEVIRRWDVDSGDCV--HMYEKGGISPISCGWYPDGQGIIAGMTDRSICMW 388
Query: 352 DLNDG--KHLHTLDHNDIITALCFSPNRYWLCAAFGPS-IKIWDLES--KEMVEE 501
DL DG K ++ + + + WL + S I ++D E+ + ++EE
Sbjct: 389 DL-DGREKECWKGQRTQKVSDIAMTDDGKWLVSVCKDSVISLFDREATVERLIEE 442
Score = 48.4 bits (110), Expect = 5e-06
Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 5/119 (4%)
Frame = +1
Query: 295 SPDGSLCASGGKDMKAMLWDLNDGKHL---HTL-DHNDIITALCFSPN-RYWLCAAFGPS 459
S +G AS KD A++W+++ H+ HTL H+ + A+ +SP+ R L
Sbjct: 283 SHNGKYLASSSKDQTAIIWEISADGHISLKHTLVGHHKPVIAILWSPDDRQVLTCGAEEV 342
Query: 460 IKIWDLESKEMVEELRPEIINQTQTSKTDPPQCLSLAWSTDGQTLFAGYSDNTIRVWQV 636
I+ WD++S + V + + P C W DGQ + AG +D +I +W +
Sbjct: 343 IRRWDVDSGDCV--------HMYEKGGISPISC---GWYPDGQGIIAGMTDRSICMWDL 390
Score = 41.9 bits (94), Expect = 4e-04
Identities = 39/165 (23%), Positives = 81/165 (49%), Gaps = 7/165 (4%)
Frame = +1
Query: 7 TKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPI 186
T+ V +A + D + +VS +D I L++ A + I+++ D ++ FS ++ N
Sbjct: 403 TQKVSDIAMTDDGKWLVSVCKDSVISLFDREATVERLIEEE---DMITS--FSLSNDNKY 457
Query: 187 IVSCGWDRTVKVWHLT-NCKLKINHLGHSGYLNTVTVSPDG---SLCASGGKDMKAMLWD 354
I+ ++ +++W++ + K+ + GH + G + ASG +D + +W
Sbjct: 458 ILVNLLNQEIRLWNIEGDPKIVSRYKGHKRSRFIIRSCFGGYKQAFIASGSEDSQVYIWH 517
Query: 355 LNDGKHLHTL-DHNDIITALCFSP-NRYWLCAAFGP-SIKIWDLE 480
+ GK + L H + + +SP N + L +A +I+IW L+
Sbjct: 518 RSTGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTIRIWGLD 562
>At3g18060.1 68416.m02297 transducin family protein / WD-40 repeat
family protein similar to 66 kDa stress protein
(SP:P90587) [Physarum polycephalum (Slime mold)];
similar to WDR1 protein GB:AAD05042 [Gallus gallus]
(Genomics 56 (1), 59-69 (1999)); contains 11 WD-40
repeats (PF00400)
Length = 609
Score = 50.8 bits (116), Expect = 9e-07
Identities = 38/122 (31%), Positives = 56/122 (45%), Gaps = 5/122 (4%)
Frame = +1
Query: 127 DGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDG 306
DGHS V P I V+CG D V + K K++ HS ++N V +PDG
Sbjct: 141 DGHSRRVLSCAIKPTRPFRI-VTCGEDFLVNFYEGPPFKFKLSSREHSNFVNCVRFAPDG 199
Query: 307 SLCASGGKDMKAMLWDLNDGKHLHTLD----HNDIITALCFSPN-RYWLCAAFGPSIKIW 471
S + D K +++D + L L H I A+ +SP+ + L + S KIW
Sbjct: 200 SKFITVSSDKKGIIYDGKTCEILGELSSDDGHKGSIYAVSWSPDGKQVLTVSADKSAKIW 259
Query: 472 DL 477
D+
Sbjct: 260 DI 261
Score = 50.8 bits (116), Expect = 9e-07
Identities = 36/125 (28%), Positives = 62/125 (49%), Gaps = 5/125 (4%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNR-QIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHAN 180
H++ VLS A +IV+ D + + K+ + HS++V+CVRF+P+ +
Sbjct: 143 HSRRVLSCAIKPTRPFRIVTCGEDFLVNFYEG-PPFKFKLSSREHSNFVNCVRFAPDGSK 201
Query: 181 PIIVSCGWDRTVKVWHLTNCKLKINHL----GHSGYLNTVTVSPDGSLCASGGKDMKAML 348
I VS D+ ++ C++ + L GH G + V+ SPDG + D A +
Sbjct: 202 FITVSS--DKKGIIYDGKTCEI-LGELSSDDGHKGSIYAVSWSPDGKQVLTVSADKSAKI 258
Query: 349 WDLND 363
WD++D
Sbjct: 259 WDISD 263
Score = 41.1 bits (92), Expect = 8e-04
Identities = 27/117 (23%), Positives = 60/117 (51%), Gaps = 2/117 (1%)
Frame = +1
Query: 16 VLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC-KYTIQDDGHSDWVSCVRFSPNHANPIIV 192
V ++A + D + V G +D + L++ + + H +S +R+SP+ + +
Sbjct: 450 VTALAVTPDGTEAVIGGQDGKLHLYSINGDSLTEEAVLERHRGAISVIRYSPDLS--MFA 507
Query: 193 SCGWDRTVKVWHLTNCKLKI-NHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLN 360
S +R VW + ++K+ N L HS +N + SP+ ++ A+G D ++++++
Sbjct: 508 SADLNREAVVWDRVSREMKLKNMLYHSARINCLAWSPNSTMVATGSLDTCVIVYEVD 564
Score = 35.9 bits (79), Expect = 0.029
Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 5/127 (3%)
Frame = +1
Query: 271 GYLNT-VTVSPDGSLCASGGKDMKAMLWDLNDGKHLH--TLD-HNDIITALCFSPNRYWL 438
G++ T + V+PDG+ GG+D K L+ +N L+ H I+ + +SP+
Sbjct: 447 GFIVTALAVTPDGTEAVIGGQDGKLHLYSINGDSLTEEAVLERHRGAISVIRYSPDLSMF 506
Query: 439 CAA-FGPSIKIWDLESKEMVEELRPEIINQTQTSKTDPPQCLSLAWSTDGQTLFAGYSDN 615
+A +WD S+EM +L+ + + + + C LAWS + + G D
Sbjct: 507 ASADLNREAVVWDRVSREM--KLKNMLYHSARIN------C--LAWSPNSTMVATGSLDT 556
Query: 616 TIRVWQV 636
+ V++V
Sbjct: 557 CVIVYEV 563
Score = 34.7 bits (76), Expect = 0.067
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = +1
Query: 265 HSGYLNTVTVSPDGSLCASGGKDMKAMLWD--LNDGKHLHTLDHNDIITALCFSPN 426
H G ++ + SPD S+ AS + +A++WD + K + L H+ I L +SPN
Sbjct: 490 HRGAISVIRYSPDLSMFASADLNREAVVWDRVSREMKLKNMLYHSARINCLAWSPN 545
Score = 27.9 bits (59), Expect = 7.7
Identities = 9/43 (20%), Positives = 22/43 (51%)
Frame = +1
Query: 511 EIINQTQTSKTDPPQCLSLAWSTDGQTLFAGYSDNTIRVWQVS 639
EI+ + + +++WS DG+ + +D + ++W +S
Sbjct: 220 EILGELSSDDGHKGSIYAVSWSPDGKQVLTVSADKSAKIWDIS 262
>At4g03020.1 68417.m00410 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to L. erythrorhizon LEC14B, GenBank accession
number Q40153
Length = 493
Score = 49.6 bits (113), Expect = 2e-06
Identities = 35/119 (29%), Positives = 58/119 (48%), Gaps = 5/119 (4%)
Frame = +1
Query: 16 VLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVS 195
+ SV FS D R++V+GS D +I +++ A + +++ H+ V+ V F+ N +I+S
Sbjct: 232 IFSVKFSTDGREVVAGSSDDSIYVYDLEAN-RVSLRTVAHTSDVNTVCFADESGN-LILS 289
Query: 196 CGWDRTVKVWHLTNCKLKINH-----LGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 357
D KVW C + + +GH + + DG S GKD LWD+
Sbjct: 290 GSDDNLCKVWD-RRCFIGRDKPAGVLVGHLEGVTFIDSRGDGRYFISNGKDQTIKLWDI 347
Score = 40.3 bits (90), Expect = 0.001
Identities = 33/140 (23%), Positives = 64/140 (45%), Gaps = 7/140 (5%)
Frame = +1
Query: 121 QDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSP 300
+D G+S + V+FS + +V+ D ++ V+ L ++ + + H+ +NTV +
Sbjct: 224 EDGGYSFGIFSVKFSTDGRE--VVAGSSDDSIYVYDLEANRVSLRTVAHTSDVNTVCFAD 281
Query: 301 D-GSLCASGGKDMKAMLWD----LNDGKHLHTL-DHNDIITAL-CFSPNRYWLCAAFGPS 459
+ G+L SG D +WD + K L H + +T + RY++ +
Sbjct: 282 ESGNLILSGSDDNLCKVWDRRCFIGRDKPAGVLVGHLEGVTFIDSRGDGRYFISNGKDQT 341
Query: 460 IKIWDLESKEMVEELRPEII 519
IK+WD+ R E++
Sbjct: 342 IKLWDIRKMSSSAPARHEVL 361
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 93
H + V + D R +S +D+TIKLW+
Sbjct: 317 HLEGVTFIDSRGDGRYFISNGKDQTIKLWD 346
>At2g26060.1 68415.m03129 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD40-repeat containing protein Ciao 1
(SP:O76071) [Homo sapiens]
Length = 352
Score = 48.8 bits (111), Expect = 4e-06
Identities = 54/237 (22%), Positives = 103/237 (43%), Gaps = 25/237 (10%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQD--DGHSDWVSCVRFSPNHA 177
H +V SV+++ + + SRDK++ +W L +Y GH+ V V++ P
Sbjct: 117 HENEVKSVSWNASGSCLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHP--T 174
Query: 178 NPIIVSCGWDRTVKVWHLTN------C--KLKINHLGHSGYLNTVTVSPDGSLCASGGKD 333
++ SC +D T+KVW + C L ++ GHS + +++ + G + D
Sbjct: 175 MDVLFSCSYDNTIKVWWSEDDDGEYQCVQTLGESNNGHSSTVWSISFNAAGDKMVTCSDD 234
Query: 334 MKAMLWDLNDGK-----------HLHTLD--HNDIITALCFSPNRYWLCAAFGPSIKIWD 474
+ +W + K HL TL H+ I + +S + A +I+++
Sbjct: 235 LTLKIWGTDIAKMQSGEEYAPWIHLCTLSGYHDRTIYSAHWSRDDIIASGAGDNAIRLFV 294
Query: 475 LESKEMVEELRPEIINQTQTSKTDPPQCLSLAWST-DGQTLFAGYSDN-TIRVWQVS 639
+ V+ P + +K S+ WS +G L A SD+ +++WQ++
Sbjct: 295 DSKHDSVD--GPSYNLLLKKNKAHENDVNSVQWSPGEGNRLLASASDDGMVKIWQLA 349
Score = 48.4 bits (110), Expect = 5e-06
Identities = 50/185 (27%), Positives = 84/185 (45%), Gaps = 17/185 (9%)
Frame = +1
Query: 127 DGHSDWVSCVRFSP--NHAN---PIIVSCGWDRTVKVWHLTN------CKLKINHLGHSG 273
+GH+D V V ++P +HA+ PI+ SC D TV++W ++ CK + H+
Sbjct: 17 EGHTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSLSRSWTCKTVLEET-HTR 75
Query: 274 YLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKH---LHTLD-HNDIITALCFSPNRYWLC 441
+ + SP G L A+ D +W N G + TL+ H + + ++ ++ + L
Sbjct: 76 TVRSCAWSPSGQLLATASFDGTTGIWK-NYGSEFECISTLEGHENEVKSVSWNASGSCLA 134
Query: 442 -AAFGPSIKIWD-LESKEMVEELRPEIINQTQTSKTDPPQCLSLAWSTDGQTLFAGYSDN 615
+ S+ IW+ LE E + + TQ K + W LF+ DN
Sbjct: 135 TCSRDKSVWIWEVLEGNEY--DCAAVLTGHTQDVK-------MVQWHPTMDVLFSCSYDN 185
Query: 616 TIRVW 630
TI+VW
Sbjct: 186 TIKVW 190
Score = 43.6 bits (98), Expect = 1e-04
Identities = 56/229 (24%), Positives = 99/229 (43%), Gaps = 20/229 (8%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA---ECKYTIQDDGHSDWVSCVRFSPNH 174
HT+ V S A+S + + + S D T +W EC T+ +GH + V V S N
Sbjct: 73 HTRTVRSCAWSPSGQLLATASFDGTTGIWKNYGSEFECISTL--EGHENEVKSV--SWNA 128
Query: 175 ANPIIVSCGWDRTVKVWHLT-----NCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMK 339
+ + +C D++V +W + +C + GH+ + V P + S D
Sbjct: 129 SGSCLATCSRDKSVWIWEVLEGNEYDCAAVLT--GHTQDVKMVQWHPTMDVLFSCSYDNT 186
Query: 340 AMLW--DLNDGKH--LHTL-----DHNDIITALCF-SPNRYWLCAAFGPSIKIW--DLES 483
+W + +DG++ + TL H+ + ++ F + + + ++KIW D+
Sbjct: 187 IKVWWSEDDDGEYQCVQTLGESNNGHSSTVWSISFNAAGDKMVTCSDDLTLKIWGTDIAK 246
Query: 484 KEMVEELRPEIINQTQTSKTDPPQCLSLAWSTDGQTLFAGYSDNTIRVW 630
+ EE P I T + D S WS D + +G DN IR++
Sbjct: 247 MQSGEEYAPWIHLCTLSGYHD-RTIYSAHWSRD-DIIASGAGDNAIRLF 293
Score = 41.1 bits (92), Expect = 8e-04
Identities = 54/192 (28%), Positives = 83/192 (43%), Gaps = 31/192 (16%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLW-----NTLAECKYTI--QDDGHSDWVSCVRF 162
HT+DV V + + S S D TIK+W + +C T+ ++GHS V + F
Sbjct: 162 HTQDVKMVQWHPTMDVLFSCSYDNTIKVWWSEDDDGEYQCVQTLGESNNGHSSTVWSISF 221
Query: 163 SPNHANPIIVSCGWDRTVKVWHLTNCKLK--------INHLGHSGYLNTVTVSPDGS--- 309
N A +V+C D T+K+W K++ I+ SGY + S S
Sbjct: 222 --NAAGDKMVTCSDDLTLKIWGTDIAKMQSGEEYAPWIHLCTLSGYHDRTIYSAHWSRDD 279
Query: 310 LCASGGKDMKAMLW-----DLNDGKHLHTL-----DHNDIITALCFSP---NRYWLCAAF 450
+ ASG D L+ D DG + L H + + ++ +SP NR A+
Sbjct: 280 IIASGAGDNAIRLFVDSKHDSVDGPSYNLLLKKNKAHENDVNSVQWSPGEGNRLLASASD 339
Query: 451 GPSIKIWDLESK 486
+KIW L +K
Sbjct: 340 DGMVKIWQLATK 351
>At3g15610.1 68416.m01980 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to serine/threonine kinase receptor associated
protein GB:NP_035629 (SP:Q9Z1Z2) [Mus musculus];
UNR-interacting protein GB:NP_009109 [Homo sapiens]
Length = 341
Score = 48.4 bits (110), Expect = 5e-06
Identities = 33/127 (25%), Positives = 56/127 (44%), Gaps = 2/127 (1%)
Frame = +1
Query: 262 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCFSPN-RYWL 438
GH G + + + + AS D A LWD G LH+ +H I+ A FS + +Y +
Sbjct: 59 GHKGAVWSSCLDNNALRAASASADFSAKLWDALTGDVLHSFEHKHIVRACAFSQDTKYLI 118
Query: 439 CAAFGPSIKIWDLESKEMVEELRPEIINQTQTSKTDPPQCLSLAWSTDGQTLFAGYSD-N 615
F ++++DL + T+ K+ P +L W QT+ + +D
Sbjct: 119 TGGFEKILRVFDLNRLD---------APPTEIDKS-PGSIRTLTWLHGDQTILSSCTDIG 168
Query: 616 TIRVWQV 636
+R+W V
Sbjct: 169 GVRLWDV 175
Score = 30.3 bits (65), Expect = 1.4
Identities = 27/112 (24%), Positives = 43/112 (38%)
Frame = +1
Query: 16 VLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVS 195
V S S D R I + T+K W+ A ++ + P N +
Sbjct: 190 VTSAEVSQDGRYITTAD-GSTVKFWD--ANHFGLVKSYDMPCNIESASLEPKSGNKFVAG 246
Query: 196 CGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 351
G D V+++ K + GH G ++ V +P G ASG +D +W
Sbjct: 247 -GEDMWVRLFDFHTGKEIGCNKGHHGPVHCVRFAPTGESYASGSEDGTIRIW 297
Score = 29.1 bits (62), Expect = 3.3
Identities = 24/106 (22%), Positives = 48/106 (45%), Gaps = 5/106 (4%)
Frame = +1
Query: 211 TVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAMLWDLNDGKHLH-TL 384
TVK W + L + + + ++ P G+ +GG+DM L+D + GK +
Sbjct: 209 TVKFWDANHFGL-VKSYDMPCNIESASLEPKSGNKFVAGGEDMWVRLFDFHTGKEIGCNK 267
Query: 385 DHNDIITALCFSP-NRYWLCAAFGPSIKIWDL--ESKEMVEELRPE 513
H+ + + F+P + + +I+IW + E + E +P+
Sbjct: 268 GHHGPVHCVRFAPTGESYASGSEDGTIRIWQTGPVNPEEISESKPK 313
>At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1
protein (ZFWD1) identical to zfwd1 protein (GI:12057164)
[Arabidopsis thaliana]
Length = 430
Score = 48.0 bits (109), Expect = 7e-06
Identities = 52/216 (24%), Positives = 92/216 (42%), Gaps = 7/216 (3%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA-ECKYTIQDDGHSDWVSCVRFSPNHAN 180
H K V +A + ++ + S+D+T+++W+ + +C + G V C+
Sbjct: 143 HQKVVTGIALPSGSDKLYTASKDETVRIWDCASGQCTGVLNLGGE---VGCI----ISEG 195
Query: 181 PIIVSCGWDRTVKVWHL-TNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 357
P ++ G VK W++ N L +N G G + ++ V D L +G +D ++W
Sbjct: 196 PWLL-VGMPNLVKAWNIQNNADLSLN--GPVGQVYSLVVGTD--LLFAGTQDGSILVWRY 250
Query: 358 ND-----GKHLHTLDHNDIITALCFSPNRYWLCAAFGPSIKIWDLESKEMVEELRPEIIN 522
N L H + +L NR + A SIK+W L++ + +
Sbjct: 251 NSTTSCFDPAASLLGHTLAVVSLYVGANRLY-SGAMDNSIKVWSLDNLQCI--------- 300
Query: 523 QTQTSKTDPPQCLSLAWSTDGQTLFAGYSDNTIRVW 630
QT T T L + W Q L + DNT+++W
Sbjct: 301 QTLTEHTSVVMSL-ICWD---QFLLSCSLDNTVKIW 332
Score = 31.5 bits (68), Expect = 0.62
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT-LAECKYTIQDDGHSDWVSCVRFSPNHAN 180
HT V+S+ V ++ SG+ D +IK+W+ +C T+ + H+ V S +
Sbjct: 266 HTLAVVSLY--VGANRLYSGAMDNSIKVWSLDNLQCIQTLTE--HTSVV----MSLICWD 317
Query: 181 PIIVSCGWDRTVKVWHLT---NCKLKINHLGHSGYL 279
++SC D TVK+W T N ++ H G L
Sbjct: 318 QFLLSCSLDNTVKIWAATEGGNLEVTYTHKEEYGVL 353
Score = 29.1 bits (62), Expect = 3.3
Identities = 29/125 (23%), Positives = 43/125 (34%), Gaps = 1/125 (0%)
Frame = +1
Query: 262 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCFSPNRYWLC 441
GH + + + + KD +WD G+ L+ + C WL
Sbjct: 142 GHQKVVTGIALPSGSDKLYTASKDETVRIWDCASGQCTGVLNLGGEVG--CIISEGPWLL 199
Query: 442 AAFGPSIKIWDLESKEMVEELRPEIINQTQTSKTDPP-QCLSLAWSTDGQTLFAGYSDNT 618
+K W+++ N S P Q SL TD LFAG D +
Sbjct: 200 VGMPNLVKAWNIQ-------------NNADLSLNGPVGQVYSLVVGTD--LLFAGTQDGS 244
Query: 619 IRVWQ 633
I VW+
Sbjct: 245 ILVWR 249
>At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 48.0 bits (109), Expect = 7e-06
Identities = 26/100 (26%), Positives = 54/100 (54%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 183
H ++L +++S + ++S S D+T++LW C ++ H+++V+CV F+P N
Sbjct: 321 HIGEILDLSWS-EKGYLLSSSVDETVRLWRV--GCDECLRTFTHNNFVTCVAFNPVDDN- 376
Query: 184 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPD 303
+S D V++W +T C++ +++ + V PD
Sbjct: 377 YFISGSIDGKVRIWDVTRCRV-VDYTDIRDIVTAVCYRPD 415
Score = 46.8 bits (106), Expect = 2e-05
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +1
Query: 187 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAMLWDLND 363
++S D TV++W + C + H+ ++ V +P D + SG D K +WD+
Sbjct: 336 LLSSSVDETVRLWRV-GCDECLRTFTHNNFVTCVAFNPVDDNYFISGSIDGKVRIWDVTR 394
Query: 364 GKHLHTLDHNDIITALCFSPN 426
+ + D DI+TA+C+ P+
Sbjct: 395 CRVVDYTDIRDIVTAVCYRPD 415
Score = 36.7 bits (81), Expect = 0.017
Identities = 33/139 (23%), Positives = 63/139 (45%), Gaps = 15/139 (10%)
Frame = +1
Query: 265 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCFSPNRYWLCA 444
H G + + SPDG AS G+D +W + + + T + ++ + + F N+ +
Sbjct: 217 HDGSILAMKFSPDGKYIASAGEDCVVRVWSITEEERTDTYEVAEVDSGVYFGMNQR---S 273
Query: 445 AFGPSIKIWDLESKEMVEELRPE------IINQTQTSKTDPP---------QCLSLAWST 579
P +KI + ++++ LR ++ T S ++ P + L L+WS
Sbjct: 274 QIEP-LKINNEKTEKKSSFLRKSSDSTCVVLPPTIFSISEKPLHEFKGHIGEILDLSWSE 332
Query: 580 DGQTLFAGYSDNTIRVWQV 636
G L + D T+R+W+V
Sbjct: 333 KGY-LLSSSVDETVRLWRV 350
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +1
Query: 4 HTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHAN 180
H V VAF+ VD+ +SGS D +++W+ + C+ D D V+ V + P+
Sbjct: 361 HNNFVTCVAFNPVDDNYFISGSIDGKVRIWD-VTRCRVVDYTD-IRDIVTAVCYRPDAKG 418
Query: 181 PIIVS 195
+I S
Sbjct: 419 AVIGS 423
>At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 48.0 bits (109), Expect = 7e-06
Identities = 26/100 (26%), Positives = 54/100 (54%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 183
H ++L +++S + ++S S D+T++LW C ++ H+++V+CV F+P N
Sbjct: 321 HIGEILDLSWS-EKGYLLSSSVDETVRLWRV--GCDECLRTFTHNNFVTCVAFNPVDDN- 376
Query: 184 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPD 303
+S D V++W +T C++ +++ + V PD
Sbjct: 377 YFISGSIDGKVRIWDVTRCRV-VDYTDIRDIVTAVCYRPD 415
Score = 46.8 bits (106), Expect = 2e-05
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +1
Query: 187 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAMLWDLND 363
++S D TV++W + C + H+ ++ V +P D + SG D K +WD+
Sbjct: 336 LLSSSVDETVRLWRV-GCDECLRTFTHNNFVTCVAFNPVDDNYFISGSIDGKVRIWDVTR 394
Query: 364 GKHLHTLDHNDIITALCFSPN 426
+ + D DI+TA+C+ P+
Sbjct: 395 CRVVDYTDIRDIVTAVCYRPD 415
Score = 36.7 bits (81), Expect = 0.017
Identities = 33/139 (23%), Positives = 63/139 (45%), Gaps = 15/139 (10%)
Frame = +1
Query: 265 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCFSPNRYWLCA 444
H G + + SPDG AS G+D +W + + + T + ++ + + F N+ +
Sbjct: 217 HDGSILAMKFSPDGKYIASAGEDCVVRVWSITEEERTDTYEVAEVDSGVYFGMNQR---S 273
Query: 445 AFGPSIKIWDLESKEMVEELRPE------IINQTQTSKTDPP---------QCLSLAWST 579
P +KI + ++++ LR ++ T S ++ P + L L+WS
Sbjct: 274 QIEP-LKINNEKTEKKSSFLRKSSDSTCVVLPPTIFSISEKPLHEFKGHIGEILDLSWSE 332
Query: 580 DGQTLFAGYSDNTIRVWQV 636
G L + D T+R+W+V
Sbjct: 333 KGY-LLSSSVDETVRLWRV 350
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +1
Query: 4 HTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHAN 180
H V VAF+ VD+ +SGS D +++W+ + C+ D D V+ V + P+
Sbjct: 361 HNNFVTCVAFNPVDDNYFISGSIDGKVRIWD-VTRCRVVDYTD-IRDIVTAVCYRPDAKG 418
Query: 181 PIIVS 195
+I S
Sbjct: 419 AVIGS 423
>At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 709
Score = 47.6 bits (108), Expect = 9e-06
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = +1
Query: 187 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAMLWDLND 363
++S D TV++W + + I H ++ V +P D + SG D K +WD++
Sbjct: 377 LLSSSVDETVRLWRVGSSDECIRVFSHKSFVTCVAFNPVDDNYFISGSIDGKVRIWDVSQ 436
Query: 364 GKHLHTLDHNDIITALCFSPN 426
+ + D I+TALC+ P+
Sbjct: 437 FRVVDYTDIRQIVTALCYRPD 457
Score = 43.2 bits (97), Expect = 2e-04
Identities = 27/122 (22%), Positives = 58/122 (47%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 183
HT ++L +++S + ++S S D+T++LW + I+ H +V+CV F+P N
Sbjct: 362 HTGEILDLSWS-EKGFLLSSSVDETVRLWR-VGSSDECIRVFSHKSFVTCVAFNPVDDN- 418
Query: 184 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 363
+S D V++W ++ ++ +++ + + PDG G + + D
Sbjct: 419 YFISGSIDGKVRIWDVSQFRV-VDYTDIRQIVTALCYRPDGKGAVVGSMTGECRFYHTTD 477
Query: 364 GK 369
+
Sbjct: 478 NQ 479
>At3g45620.1 68416.m04927 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats; similar to
PC326 protein (GI:200241) (PIR2:S37694) [Mus
musculus];Human (H326) translated mRNA - Homo sapiens,
EMBL:HS06631
Length = 481
Score = 47.2 bits (107), Expect = 1e-05
Identities = 36/113 (31%), Positives = 56/113 (49%), Gaps = 3/113 (2%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 183
H V +V F+ +VSGS D+ I LWN L+ + GH + V +F P +
Sbjct: 54 HEGCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSGSRKLSYPSGHCENVFQTKFIPFTDDR 113
Query: 184 IIVSCGWDRTVKVWH-LTNCKLKINHLG-HSGYLNTVTVSP-DGSLCASGGKD 333
I++ G D V++ L N K++ LG H G + + V P D ++ S G+D
Sbjct: 114 TIITSGADGQVRLGQILENGKVETKRLGRHHGRVYKLAVLPGDPNVFYSCGED 166
Score = 31.5 bits (68), Expect = 0.62
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +1
Query: 262 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 366
GH G +N V + G + SG D + MLW+ G
Sbjct: 53 GHEGCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSG 87
>At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 698
Score = 46.4 bits (105), Expect = 2e-05
Identities = 26/100 (26%), Positives = 50/100 (50%), Gaps = 1/100 (1%)
Frame = +1
Query: 130 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DG 306
GHS + + +S N+ ++S D +V++W + C+ + H+ Y+ +V +P D
Sbjct: 354 GHSGDILDISWSKNNR---LLSASVDNSVRLWQI-GCEDCLGIFSHNNYVTSVQFNPVDD 409
Query: 307 SLCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCFSPN 426
SG D K +W + + + D I+TA+C+ P+
Sbjct: 410 DHFISGSIDGKVRIWSASQCQVVDWADARGIVTAVCYQPD 449
Score = 28.3 bits (60), Expect = 5.8
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +1
Query: 4 HTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHAN 180
H V SV F+ VD+ +SGS D +++W+ ++C+ D V+ V + P+
Sbjct: 395 HNNYVTSVQFNPVDDDHFISGSIDGKVRIWSA-SQCQVVDWADARG-IVTAVCYQPDGQA 452
Query: 181 PII 189
II
Sbjct: 453 VII 455
>At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat family
protein contains G-protein beta WD-40 repeats
Length = 539
Score = 46.4 bits (105), Expect = 2e-05
Identities = 37/125 (29%), Positives = 57/125 (45%)
Frame = +1
Query: 262 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCFSPNRYWLC 441
GH G + ++ + D + SG DM +WD + K + TL H+D + L +P+ L
Sbjct: 255 GHEGPITSLAL--DMTSIFSGSWDMSVRIWDRSSMKCVKTLRHSDWVWGL--APHETTLA 310
Query: 442 AAFGPSIKIWDLESKEMVEELRPEIINQTQTSKTDPPQCLSLAWSTDGQTLFAGYSDNTI 621
+ G + IWD+ S E II T SLA S G LF G D I
Sbjct: 311 STSGSDVYIWDVSS-----ETPLAIIPDAHEGTT-----YSLARSHTGDFLFTGGEDGGI 360
Query: 622 RVWQV 636
+++++
Sbjct: 361 KMFEI 365
Score = 41.9 bits (94), Expect = 4e-04
Identities = 48/217 (22%), Positives = 99/217 (45%), Gaps = 16/217 (7%)
Frame = +1
Query: 28 AFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGW 204
+ ++D I SGS D ++++W+ + +C T++ HSDWV +P H + + G
Sbjct: 262 SLALDMTSIFSGSWDMSVRIWDRSSMKCVKTLR---HSDWV--WGLAP-HETTLASTSGS 315
Query: 205 DRTVKVWHLTN-CKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND-GKHLH 378
D V +W +++ L I H G ++ S G +GG+D ++++ G
Sbjct: 316 D--VYIWDVSSETPLAIIPDAHEGTTYSLARSHTGDFLFTGGEDGGIKMFEIRRYGSETS 373
Query: 379 T------LDHNDIITALCFSPNRYWLCAAFGPSIKIWDLESKEMVEELRPEIINQTQTSK 540
+ H + +L F WL +A G K+ ++ +++++ R + +S
Sbjct: 374 VVLISQWMPHTSPVYSLSF--EFPWLVSASGDG-KLALIDVRKLLKTNRCAYSKRISSST 430
Query: 541 TDPPQCLSLAWSTDGQTLFAGY-------SDNTIRVW 630
+PPQ + + ++ ++ GY + T+R+W
Sbjct: 431 VEPPQRMLHGFGSNLFSVDVGYDRIVCGGEEGTVRIW 467
>At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI3 (SP:O22469) [Arabidopsis thaliana]
Length = 424
Score = 46.0 bits (104), Expect = 3e-05
Identities = 51/217 (23%), Positives = 95/217 (43%), Gaps = 19/217 (8%)
Frame = +1
Query: 52 IVSGSRDKTIKLWNTLAECKYTIQD-----DGHSDWVSCVRFSPNHANPIIVSCGWDRTV 216
++SGS+D+ I LW+ A + + +GH + V + + N I S G D +
Sbjct: 185 LLSGSQDQRICLWDVSATATDKVLNPMHVYEGHQSIIEDVAWHMKNEN-IFGSAGDDCQL 243
Query: 217 KVWHLTNCKLKINHLGHSGYLNTVTVSPDGS-LCASGGKDMKAMLWDLND-GKHLHTLD- 387
+W L +++ H +N ++ +P + A+ D L+DL LH L
Sbjct: 244 VIWDLRTNQMQHQVKVHEREINYLSFNPFNEWVLATASSDSTVALFDLRKLTAPLHVLSK 303
Query: 388 HNDIITALCFSPNRYWLCAAFGPS--IKIWD--------LESKEMVEELRPEIINQTQTS 537
H + + + PN + A+ G + +WD LE + E+ PE++
Sbjct: 304 HEGEVFQVEWDPNHETVLASSGEDRRLMVWDINRVGDEQLEIELDAEDGPPELLFSHGGH 363
Query: 538 KTDPPQCLSLAWSTDGQTLFAGYS-DNTIRVWQVSIS 645
K + AW+ D + + + DN+++VWQ++ S
Sbjct: 364 KA---KISDFAWNKDEPWVISSVAEDNSLQVWQMAES 397
Score = 35.5 bits (78), Expect = 0.038
Identities = 30/122 (24%), Positives = 57/122 (46%), Gaps = 3/122 (2%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIV-SGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHAN 180
H + VA+ + N I S D + +W+ L + Q H ++ + F+P +
Sbjct: 217 HQSIIEDVAWHMKNENIFGSAGDDCQLVIWD-LRTNQMQHQVKVHEREINYLSFNPFN-E 274
Query: 181 PIIVSCGWDRTVKVWHLTNCKLKINHLG-HSGYLNTVTVSPDG-SLCASGGKDMKAMLWD 354
++ + D TV ++ L ++ L H G + V P+ ++ AS G+D + M+WD
Sbjct: 275 WVLATASSDSTVALFDLRKLTAPLHVLSKHEGEVFQVEWDPNHETVLASSGEDRRLMVWD 334
Query: 355 LN 360
+N
Sbjct: 335 IN 336
>At4g04940.1 68417.m00718 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats
Length = 910
Score = 46.0 bits (104), Expect = 3e-05
Identities = 36/149 (24%), Positives = 63/149 (42%), Gaps = 1/149 (0%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 183
H +V+ VA N ++S +K+W+ + D G S V+ + N
Sbjct: 473 HDGEVIGVACDSTNTLMISAGYHGDLKVWDFKKRELKSQWDVG----CSLVKIVYHRVNG 528
Query: 184 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 363
++ + D ++++ + K+ GH+ + + S DG S D +WD+
Sbjct: 529 LLATVADDFVIRLYDVVTLKMVREFRGHTDRITDLCFSEDGKWVISSSMDGSLRIWDVIL 588
Query: 364 GKHLHTLDHNDI-ITALCFSPNRYWLCAA 447
K + + H D+ ITAL SPN L A
Sbjct: 589 AKQIDGV-HVDVPITALSLSPNMDVLATA 616
>At1g52730.2 68414.m05959 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 45.6 bits (103), Expect = 4e-05
Identities = 32/127 (25%), Positives = 55/127 (43%), Gaps = 2/127 (1%)
Frame = +1
Query: 262 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCFSPN-RYWL 438
GH G + + + + AS D A LWD G LH+ +H I+ A FS + + L
Sbjct: 59 GHKGAVWSSCLDNNALRAASASADFSAKLWDALTGDVLHSFEHKHIVRACAFSEDTKSLL 118
Query: 439 CAAFGPSIKIWDLESKEMVEELRPEIINQTQTSKTDPPQCLSLAWSTDGQTLFAGYSD-N 615
F ++++D+ + T+ K+ P +L W QT+ + +D
Sbjct: 119 TGGFEKILRVFDMNRLD---------APPTEVDKS-PGSIRTLTWLHSDQTILSSCTDIG 168
Query: 616 TIRVWQV 636
+R+W V
Sbjct: 169 GVRLWDV 175
>At1g52730.1 68414.m05958 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 45.6 bits (103), Expect = 4e-05
Identities = 32/127 (25%), Positives = 55/127 (43%), Gaps = 2/127 (1%)
Frame = +1
Query: 262 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCFSPN-RYWL 438
GH G + + + + AS D A LWD G LH+ +H I+ A FS + + L
Sbjct: 59 GHKGAVWSSCLDNNALRAASASADFSAKLWDALTGDVLHSFEHKHIVRACAFSEDTKSLL 118
Query: 439 CAAFGPSIKIWDLESKEMVEELRPEIINQTQTSKTDPPQCLSLAWSTDGQTLFAGYSD-N 615
F ++++D+ + T+ K+ P +L W QT+ + +D
Sbjct: 119 TGGFEKILRVFDMNRLD---------APPTEVDKS-PGSIRTLTWLHSDQTILSSCTDIG 168
Query: 616 TIRVWQV 636
+R+W V
Sbjct: 169 GVRLWDV 175
>At5g43930.1 68418.m05374 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat protein 5 (SP:Q9UGP9) [Homo
sapiens]
Length = 726
Score = 44.8 bits (101), Expect = 6e-05
Identities = 31/118 (26%), Positives = 54/118 (45%), Gaps = 1/118 (0%)
Frame = +1
Query: 10 KDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDDGHSDWVSCVRFSPNHANPI 186
+ ++ AFS D R + S D T+K+ + C + + WV VRF P+H+ I
Sbjct: 107 RSTIAAAFSTDGRTLASTHGDHTVKIIDCETGNCLKVLTGHRRTPWV--VRFHPHHSE-I 163
Query: 187 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLN 360
+ S D V++W+ T + +HL + + ++ +G L A K +W N
Sbjct: 164 VASGSLDLEVRLWNTTTSECIRSHLFYRP-IASIAFHAEGELLAV-ASGHKLHMWHYN 219
Score = 28.7 bits (61), Expect = 4.4
Identities = 10/27 (37%), Positives = 20/27 (74%)
Frame = +1
Query: 547 PPQCLSLAWSTDGQTLFAGYSDNTIRV 627
P ++ A+STDG+TL + + D+T+++
Sbjct: 106 PRSTIAAAFSTDGRTLASTHGDHTVKI 132
>At5g43920.1 68418.m05372 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 523
Score = 44.4 bits (100), Expect = 8e-05
Identities = 42/174 (24%), Positives = 79/174 (45%), Gaps = 9/174 (5%)
Frame = +1
Query: 133 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWH-LTNCKLKINHL--GHSGYLNTVTVSPD 303
H + V V+FS ++ + + D T +W L + K+++ H H ++ V+ SPD
Sbjct: 223 HKNEVWFVQFS--NSGKYLATASSDCTAIIWKVLDDNKVELKHTLESHQNPVSFVSWSPD 280
Query: 304 GSLCASGGKDMKAMLWDLNDGKHLHTLDHND----IITALCFSPNRYWLCAAFGP--SIK 465
+ + G LWD++ G HT +N+ + + F + +C + P I
Sbjct: 281 DTKLLTCGNAEVLKLWDVDTGVLRHTFGNNNTGFTVSSCAWFPDSTRLVCGSSDPERGIV 340
Query: 466 IWDLESKEMVEELRPEIINQTQTSKTDPPQCLSLAWSTDGQTLFAGYSDNTIRV 627
+WD + E ++ R T P+ + LA + DG+++ +SD IR+
Sbjct: 341 MWDTDGNE-IKAWR----------GTRIPKVVDLAVTPDGESMITVFSDKEIRI 383
Score = 36.3 bits (80), Expect = 0.022
Identities = 37/160 (23%), Positives = 74/160 (46%), Gaps = 8/160 (5%)
Frame = +1
Query: 16 VLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPII-V 192
V+ +A + D +++ DK I++ N + + I ++ ++ + S + I+ +
Sbjct: 360 VVDLAVTPDGESMITVFSDKEIRILNLETKVERVISEEQP---ITSLSISGDGKFFIVNL 416
Query: 193 SCGWDRTVKVWHLTN-CKLKINHLGH--SGY-LNTVTVSPDGSLCASGGKDMKAMLWDLN 360
SC + + +W L K + GH S Y + + D S ASG +D + +W+L
Sbjct: 417 SC---QEIHLWDLAGEWKQPLKFSGHRQSKYVIRSCFGGLDSSFIASGSEDSQVYIWNLK 473
Query: 361 DGKHLHTLD-HNDIITALCFSPN--RYWLCAAFGPSIKIW 471
+ K L L H+ + + ++P R A+ +I+IW
Sbjct: 474 NTKPLEVLSGHSMTVNCVSWNPKNPRMLASASDDQTIRIW 513
>At3g50390.1 68416.m05512 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to myosin heavy chain kinase B (gb:U90946)
[Dictyostelium discoideum]
Length = 469
Score = 44.0 bits (99), Expect = 1e-04
Identities = 48/228 (21%), Positives = 90/228 (39%), Gaps = 13/228 (5%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 183
H + +A S D R + SGS DKT K+W +++ + + H D V+ V + +
Sbjct: 210 HLDAISCLALSEDKRLLYSGSWDKTFKVWR-VSDLRCVESVNAHEDAVNAV---VSGFDG 265
Query: 184 IIVSCGWDRTVKVWHLTNCKLKINH------LGHSGYLNTVTVSPDGSLCASGGKDMKAM 345
++ + D TVKVW + H L + + V +L G D
Sbjct: 266 LVFTGSADGTVKVWRREDQAKDTKHFFSETLLKQDCAVTAIAVDQSATLVYCGSSDGTVN 325
Query: 346 LWDL-NDGKHLHTLDHNDIITALCFSPNRYWLCAAFGPSIKIWDLESKEMVEELRPEIIN 522
W+ N+ K+ L + + + + I++W E +
Sbjct: 326 FWERENNMKNGGVLKGHKLAVLCLVAAGNLMFSGSADLGIRVW-----RRPEGGGEHVCL 380
Query: 523 QTQTSKTDPPQCLSL---AWSTDGQ---TLFAGYSDNTIRVWQVSISA 648
T P +CL++ S G+ +++G D ++++W+VS S+
Sbjct: 381 SVLTGHAGPVKCLAVERDQESVSGERRWIVYSGSLDRSVKMWRVSESS 428
>At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI2 (SP:O22468) [Arabidopsis thaliana] WD-40
repeats (PF0400);
Length = 415
Score = 44.0 bits (99), Expect = 1e-04
Identities = 52/234 (22%), Positives = 104/234 (44%), Gaps = 20/234 (8%)
Frame = +1
Query: 4 HTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNTLAECKYTIQD-----DGHSDWVSCVRFS 165
H K+ +++S ++SGS+D+ I LW+ A + + + +GH ++ V +
Sbjct: 167 HDKEGYGLSWSPFKEGYLLSGSQDQKICLWDVSATPQDKVLNAMFVYEGHESAIADVSWH 226
Query: 166 PNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS-LCASGGKDMKA 342
+ N + S G D + +W +++ H +N ++ +P + A+ D
Sbjct: 227 MKNEN-LFGSAGEDGRLVIWDTRTNQMQHQVKVHEREVNYLSFNPFNEWVLATASSDSTV 285
Query: 343 MLWDLND-GKHLHTL-DHNDIITALCFSPNRYWLCAAFGPS--IKIWDL-----ESKEM- 492
L+DL LH + H + + + PN + A+ G + +WDL E E+
Sbjct: 286 ALFDLRKLNAPLHVMSSHEGEVFQVEWDPNHETVLASSGEDRRLMVWDLNRVGEEQLEIE 345
Query: 493 --VEELRPEIINQTQTSKTDPPQCLSLAWSTDGQTLFAGYS-DNTIRVWQVSIS 645
E+ PE++ K + AW+ + + A + DN+++VWQ++ S
Sbjct: 346 LDAEDGPPELLFSHGGHKA---KISDFAWNKNEPWVIASVAEDNSLQVWQMAES 396
>At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 44.0 bits (99), Expect = 1e-04
Identities = 53/221 (23%), Positives = 92/221 (41%), Gaps = 11/221 (4%)
Frame = +1
Query: 16 VLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQD--DGHSDWVSCVRFSP------- 168
V ++ F D + +K IK++ EC+ I+D D H V S
Sbjct: 487 VCAIGFDRDGEFFATAGVNKKIKIF----ECESIIKDGRDIHYPVVELASRSKLSGICWN 542
Query: 169 NHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAM 345
++ + S ++ V+VW + +L H + ++ S D +L ASG D
Sbjct: 543 SYIKSQVASSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVK 602
Query: 346 LWDLNDGKHLHTLDHNDIITALCFSPNRYWLCAAFGPSIKIWDLESKEMVEELR-PEIIN 522
LW +N G + T+ I + F P+ AFG + + K +LR P++
Sbjct: 603 LWSINQGVSIGTIKTKANICCVQF-PSETGRSLAFGSA------DHKVYYYDLRNPKLPL 655
Query: 523 QTQTSKTDPPQCLSLAWSTDGQTLFAGYSDNTIRVWQVSIS 645
T + +S D TL + +DNT+++W +S+S
Sbjct: 656 CTMIGH---HKTVSYVRFVDSSTLVSSSTDNTLKLWDLSMS 693
>At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 44.0 bits (99), Expect = 1e-04
Identities = 53/221 (23%), Positives = 92/221 (41%), Gaps = 11/221 (4%)
Frame = +1
Query: 16 VLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQD--DGHSDWVSCVRFSP------- 168
V ++ F D + +K IK++ EC+ I+D D H V S
Sbjct: 487 VCAIGFDRDGEFFATAGVNKKIKIF----ECESIIKDGRDIHYPVVELASRSKLSGICWN 542
Query: 169 NHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAM 345
++ + S ++ V+VW + +L H + ++ S D +L ASG D
Sbjct: 543 SYIKSQVASSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVK 602
Query: 346 LWDLNDGKHLHTLDHNDIITALCFSPNRYWLCAAFGPSIKIWDLESKEMVEELR-PEIIN 522
LW +N G + T+ I + F P+ AFG + + K +LR P++
Sbjct: 603 LWSINQGVSIGTIKTKANICCVQF-PSETGRSLAFGSA------DHKVYYYDLRNPKLPL 655
Query: 523 QTQTSKTDPPQCLSLAWSTDGQTLFAGYSDNTIRVWQVSIS 645
T + +S D TL + +DNT+++W +S+S
Sbjct: 656 CTMIGH---HKTVSYVRFVDSSTLVSSSTDNTLKLWDLSMS 693
>At1g49450.1 68414.m05543 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 471
Score = 44.0 bits (99), Expect = 1e-04
Identities = 48/175 (27%), Positives = 73/175 (41%), Gaps = 8/175 (4%)
Frame = +1
Query: 133 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSL 312
H D VSC+ S N ++ S WD+T+KVW L++ K + H +NTV VS L
Sbjct: 244 HFDAVSCL--SLNEDLGLLYSGSWDKTLKVWRLSDSKCLESIEAHDDAVNTV-VSGFDDL 300
Query: 313 CASGGKDMKAMLWDLN-DGKHL-HTL-----DHNDIITALCFS-PNRYWLCAAFGPSIKI 468
+G D +W GK + H L + +TAL + + C + ++
Sbjct: 301 VFTGSADGTLKVWKREVQGKEMKHVLVQVLMKQENAVTALAVNLTDAVVYCGSSDGTVNF 360
Query: 469 WDLESKEMVEELRPEIINQTQTSKTDPPQCLSLAWSTDGQTLFAGYSDNTIRVWQ 633
W+ R + + T L LA T G L +G +D I VW+
Sbjct: 361 WE----------RQKYLTHKGTIHGHRMAVLCLA--TAGSLLLSGGADKNICVWK 403
Score = 35.9 bits (79), Expect = 0.029
Identities = 30/126 (23%), Positives = 50/126 (39%), Gaps = 6/126 (4%)
Frame = +1
Query: 13 DVLSVAFSVDNRQIVSGSRDKTIKLWNTLA---ECKYTIQDDGHSDWVSCVRFSPNHANP 183
D ++ S + + +GS D T+K+W E K+ + + + N +
Sbjct: 288 DAVNTVVSGFDDLVFTGSADGTLKVWKREVQGKEMKHVLVQVLMKQENAVTALAVNLTDA 347
Query: 184 IIVSCGWDRTVKVWHLTNCKLKINHLG--HSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 357
++ D TV W + H G H + + ++ GSL SGG D +W
Sbjct: 348 VVYCGSSDGTVNFWERQKY---LTHKGTIHGHRMAVLCLATAGSLLLSGGADKNICVWKR 404
Query: 358 N-DGKH 372
N DG H
Sbjct: 405 NGDGSH 410
Score = 33.1 bits (72), Expect = 0.20
Identities = 22/74 (29%), Positives = 38/74 (51%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 183
H V ++ + D + SGS DKT+K+W L++ K + H D V+ V + +
Sbjct: 244 HFDAVSCLSLNEDLGLLYSGSWDKTLKVWR-LSDSKCLESIEAHDDAVNTV---VSGFDD 299
Query: 184 IIVSCGWDRTVKVW 225
++ + D T+KVW
Sbjct: 300 LVFTGSADGTLKVW 313
>At3g44530.1 68416.m04786 transducin family protein / WD-40 repeat
family protein contains 6 (4 significant) WD-40 repeats
(PF0400); nuclear protein HIRA, mouse, PIR:S68141
Length = 1051
Score = 43.6 bits (98), Expect = 1e-04
Identities = 27/88 (30%), Positives = 41/88 (46%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 183
HT DV+ + +S D+ + SGS D T+ +WN T+ GH V V + P
Sbjct: 117 HTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVL-RGHLSLVKGVTWDP--IGS 173
Query: 184 IIVSCGWDRTVKVWHLTNCKLKINHLGH 267
I S D+TV +W ++ + GH
Sbjct: 174 FIASQSDDKTVIIWRTSDWGMAHRTDGH 201
Score = 39.1 bits (87), Expect = 0.003
Identities = 24/86 (27%), Positives = 38/86 (44%)
Frame = +1
Query: 130 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 309
GH+ V + +SP+ + ++ S D TV +W++ GH + VT P GS
Sbjct: 116 GHTADVVDLNWSPDDS--MLASGSLDNTVHIWNMRTGMCTTVLRGHLSLVKGVTWDPIGS 173
Query: 310 LCASGGKDMKAMLWDLNDGKHLHTLD 387
AS D ++W +D H D
Sbjct: 174 FIASQSDDKTVIIWRTSDWGMAHRTD 199
Score = 38.3 bits (85), Expect = 0.005
Identities = 38/137 (27%), Positives = 61/137 (44%), Gaps = 13/137 (9%)
Frame = +1
Query: 265 HSGY-LNTVTVSPDGSLCASGGKDMKAMLWDLN--DGKH--LHTL-DHNDIITALCFSPN 426
H G + ++ V P+G A+GG D K++ DL D K L TL DH + + ++ N
Sbjct: 11 HEGLQIFSIDVQPNGERFATGGGDHKSVDKDLQNIDTKERLLATLRDHFGSVNCVRWAKN 70
Query: 427 -RYWLCAAFGPSIKIWDLESKEMVEEL----RPEIIN--QTQTSKTDPPQCLSLAWSTDG 585
RY + I+I + + E P++ N T + + L WS D
Sbjct: 71 SRYVASGSDDQVIQIHERKPGSGTTEFGSGEAPDVENWKAVMTLRGHTADVVDLNWSPDD 130
Query: 586 QTLFAGYSDNTIRVWQV 636
L +G DNT+ +W +
Sbjct: 131 SMLASGSLDNTVHIWNM 147
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +1
Query: 235 NCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL-DHNDIITAL 411
N K + GH+ + + SPD S+ ASG D +W++ G L H ++ +
Sbjct: 107 NWKAVMTLRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLVKGV 166
Query: 412 CFSP 423
+ P
Sbjct: 167 TWDP 170
>At1g80670.1 68414.m09466 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400) (1
weak); similar to Hypothetical RAE1-like
protein.(SP:Q38942) [Arabidopsis thaliana]; similar to
mRNA-associated protein mrnp 41 ((mRNA export protein)
(GB:AAC28126) (GI:1903456)(RAE1) (MRNP41) (SP:P78406)
[Homo sapiens]
Length = 349
Score = 43.6 bits (98), Expect = 1e-04
Identities = 31/127 (24%), Positives = 55/127 (43%), Gaps = 7/127 (5%)
Frame = +1
Query: 136 SDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINH-----LGHSGYLNTVTVSP 300
+D +S + FSP I+V+ WD V+ W ++ + + H +
Sbjct: 25 ADSISSLSFSPRA--DILVATSWDNQVRCWEISRSGASLASAPKASISHDQPVLCSAWKD 82
Query: 301 DGSLCASGGKDMKAMLWD-LNDGKHLHTLDHNDIITALCFSPNRYWLC-AAFGPSIKIWD 474
DG+ SGG D +A +W L+ G+ + H I A+ + P L ++ ++K WD
Sbjct: 83 DGTTVFSGGCDKQAKMWPLLSGGQPVTVAMHEGPIAAMAWIPGMNLLATGSWDKTLKYWD 142
Query: 475 LESKEMV 495
+ V
Sbjct: 143 TRQQNPV 149
Score = 33.9 bits (74), Expect = 0.12
Identities = 42/180 (23%), Positives = 76/180 (42%), Gaps = 13/180 (7%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWV--SCVRFSPNHA 177
H + ++A+ + +GS DKT+K W+T Q+ H+ + C S H
Sbjct: 113 HEGPIAAMAWIPGMNLLATGSWDKTLKYWDTRQ------QNPVHTQQLPDKCYTLSVKH- 165
Query: 178 NPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNT--VTVSPDGSLCASGGKDMKAMLW 351
P++V DR + V++L N + + + T VT PD G + + +
Sbjct: 166 -PLMVVGTADRNLIVFNLQNPQTEFKRIQSPLKYQTRCVTAFPDQQGFLVGSIEGRVGVH 224
Query: 352 DLNDGKHLHTL------DHNDI--ITALCFSP-NRYWLCAAFGPSIKIWDLESKEMVEEL 504
L+D + D NDI + +L F P + + A + WD +SK+ ++ +
Sbjct: 225 HLDDSQQSKNFTFKCHRDGNDIYSVNSLNFHPVHGTFATAGSDGAFNFWDKDSKQRLKAM 284
Score = 32.7 bits (71), Expect = 0.27
Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Frame = +1
Query: 394 DIITALCFSPNRYWLCA-AFGPSIKIWDLESKEMVEELRPEIINQTQTSKTDPPQCLSLA 570
D I++L FSP L A ++ ++ W++ P+ S P C A
Sbjct: 26 DSISSLSFSPRADILVATSWDNQVRCWEISRSGASLASAPK----ASISHDQPVLCS--A 79
Query: 571 WSTDGQTLFAGYSDNTIRVW 630
W DG T+F+G D ++W
Sbjct: 80 WKDDGTTVFSGGCDKQAKMW 99
Score = 32.3 bits (70), Expect = 0.36
Identities = 17/65 (26%), Positives = 27/65 (41%)
Frame = +1
Query: 187 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 366
+ S G D+ K+W L + + H G + + P +L A+G D WD
Sbjct: 87 VFSGGCDKQAKMWPLLSGGQPVTVAMHEGPIAAMAWIPGMNLLATGSWDKTLKYWDTRQQ 146
Query: 367 KHLHT 381
+HT
Sbjct: 147 NPVHT 151
>At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota,PID:g2253631
Length = 457
Score = 43.2 bits (97), Expect = 2e-04
Identities = 51/221 (23%), Positives = 94/221 (42%), Gaps = 15/221 (6%)
Frame = +1
Query: 16 VLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVS 195
V S+ ++ D R + G + ++LW++ + + GH V + ++ NH I+ +
Sbjct: 185 VTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLRTLKGGHQSRVGSLAWN-NH---ILTT 240
Query: 196 CGWDRTVKVWHLTNCKLKI--NHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL---- 357
G D + + + + I + GH+ + + S G ASGG D +WD
Sbjct: 241 GGMDGLI-INNDVRIRSPIVETYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVAS 299
Query: 358 --NDGKHLHTL-DHNDIITALCFSPNRYWLCAAFG----PSIKIWDLESKEMVEELRPEI 516
+ + LH L +H + AL + P + L A G +IK W+ +
Sbjct: 300 SNSTTQWLHRLEEHTSAVKALAWCPFQANLLATGGGGGDRTIKFWNTHT--------GAC 351
Query: 517 INQTQTSKTDPPQCLSLAWSTDGQTLFA--GYSDNTIRVWQ 633
+N T Q SL WS + + L + G++ N + +W+
Sbjct: 352 LNSVDTGS----QVCSLLWSKNERELLSSHGFTQNQLTLWK 388
Score = 40.3 bits (90), Expect = 0.001
Identities = 35/158 (22%), Positives = 68/158 (43%), Gaps = 4/158 (2%)
Frame = +1
Query: 187 IVSCGWDRTVKVWHLTNCKLK--INHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLN 360
+++ D TV +W + + G + ++ +PDG A G + + LWD
Sbjct: 153 VLAIALDHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSA 212
Query: 361 DGKHLHTLD--HNDIITALCFSPNRYWLCAAFGPSIKIWDLESKEMVEELRPEIINQTQT 534
+ L TL H + +L + N + L + I + ++ +R I+ +T
Sbjct: 213 SNRQLRTLKGGHQSRVGSLAW--NNHILTTGGMDGLII----NNDV--RIRSPIV---ET 261
Query: 535 SKTDPPQCLSLAWSTDGQTLFAGYSDNTIRVWQVSISA 648
+ + L WS GQ L +G +DN + +W S+++
Sbjct: 262 YRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVAS 299
Score = 40.3 bits (90), Expect = 0.001
Identities = 39/185 (21%), Positives = 83/185 (44%), Gaps = 11/185 (5%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQ----DDGHSDWVSCVRFSP 168
HT++V + +S +Q+ SG D + +W+ ++A T Q + H+ V + + P
Sbjct: 265 HTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAWCP 324
Query: 169 NHANPIIV-SCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS--LCASGGKDMK 339
AN + G DRT+K W+ T+ +N + + ++ S + L + G +
Sbjct: 325 FQANLLATGGGGGDRTIKFWN-THTGACLNSVDTGSQVCSLLWSKNERELLSSHGFTQNQ 383
Query: 340 AMLWDL-NDGKHLHTLDHNDIITALCFSPNRYWLCAAFG-PSIKIWDLES-KEMVEELRP 510
LW + K H + + SP+ + +A G +++ W++ E ++ P
Sbjct: 384 LTLWKYPSMVKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFWNVFGVPETAKKAAP 443
Query: 511 EIINQ 525
+ +++
Sbjct: 444 KAVSE 448
Score = 35.9 bits (79), Expect = 0.029
Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 3/108 (2%)
Frame = +1
Query: 322 GGKDMKAMLWDLNDGKHLHTLDHNDIITALCFSPNRYWLCAAFG---PSIKIWDLESKEM 492
GG D W+ + G L+++D + +L +S N L ++ G + +W S
Sbjct: 335 GGGDRTIKFWNTHTGACLNSVDTGSQVCSLLWSKNERELLSSHGFTQNQLTLWKYPSMVK 394
Query: 493 VEELRPEIINQTQTSKTDPPQCLSLAWSTDGQTLFAGYSDNTIRVWQV 636
+ EL T T + L +A S DG T+ + D T+R W V
Sbjct: 395 MAEL---------TGHTS--RVLYMAQSPDGCTVASAAGDETLRFWNV 431
>At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota, PID:g2253631
Length = 447
Score = 43.2 bits (97), Expect = 2e-04
Identities = 51/221 (23%), Positives = 94/221 (42%), Gaps = 15/221 (6%)
Frame = +1
Query: 16 VLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVS 195
V S+ ++ D R + G + ++LW++ + + GH V + ++ NH I+ +
Sbjct: 175 VTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLRTLKGGHQSRVGSLAWN-NH---ILTT 230
Query: 196 CGWDRTVKVWHLTNCKLKI--NHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL---- 357
G D + + + + I + GH+ + + S G ASGG D +WD
Sbjct: 231 GGMDGLI-INNDVRIRSPIVETYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVAS 289
Query: 358 --NDGKHLHTL-DHNDIITALCFSPNRYWLCAAFG----PSIKIWDLESKEMVEELRPEI 516
+ + LH L +H + AL + P + L A G +IK W+ +
Sbjct: 290 SNSTTQWLHRLEEHTSAVKALAWCPFQANLLATGGGGGDRTIKFWNTHT--------GAC 341
Query: 517 INQTQTSKTDPPQCLSLAWSTDGQTLFA--GYSDNTIRVWQ 633
+N T Q SL WS + + L + G++ N + +W+
Sbjct: 342 LNSVDTGS----QVCSLLWSKNERELLSSHGFTQNQLTLWK 378
Score = 40.3 bits (90), Expect = 0.001
Identities = 35/158 (22%), Positives = 68/158 (43%), Gaps = 4/158 (2%)
Frame = +1
Query: 187 IVSCGWDRTVKVWHLTNCKLK--INHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLN 360
+++ D TV +W + + G + ++ +PDG A G + + LWD
Sbjct: 143 VLAIALDHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSA 202
Query: 361 DGKHLHTLD--HNDIITALCFSPNRYWLCAAFGPSIKIWDLESKEMVEELRPEIINQTQT 534
+ L TL H + +L + N + L + I + ++ +R I+ +T
Sbjct: 203 SNRQLRTLKGGHQSRVGSLAW--NNHILTTGGMDGLII----NNDV--RIRSPIV---ET 251
Query: 535 SKTDPPQCLSLAWSTDGQTLFAGYSDNTIRVWQVSISA 648
+ + L WS GQ L +G +DN + +W S+++
Sbjct: 252 YRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVAS 289
Score = 39.5 bits (88), Expect = 0.002
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQ----DDGHSDWVSCVRFSP 168
HT++V + +S +Q+ SG D + +W+ ++A T Q + H+ V + + P
Sbjct: 255 HTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAWCP 314
Query: 169 NHANPIIV-SCGWDRTVKVWH 228
AN + G DRT+K W+
Sbjct: 315 FQANLLATGGGGGDRTIKFWN 335
Score = 36.7 bits (81), Expect = 0.017
Identities = 30/123 (24%), Positives = 52/123 (42%), Gaps = 4/123 (3%)
Frame = +1
Query: 1 DHTKDVLSVAFSVDNRQIVS---GSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPN 171
+HT V ++A+ +++ G D+TIK WNT D G V + +S N
Sbjct: 302 EHTSAVKALAWCPFQANLLATGGGGGDRTIKFWNTHTGACLNSVDTGSQ--VCSLLWSKN 359
Query: 172 HANPIIVSCGWDRT-VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAML 348
++ S G+ + + +W + GH+ + + SPDG AS D
Sbjct: 360 ERE-LLSSHGFTQNQLTLWKYPSMVKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRF 418
Query: 349 WDL 357
W++
Sbjct: 419 WNV 421
Score = 35.9 bits (79), Expect = 0.029
Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 3/108 (2%)
Frame = +1
Query: 322 GGKDMKAMLWDLNDGKHLHTLDHNDIITALCFSPNRYWLCAAFG---PSIKIWDLESKEM 492
GG D W+ + G L+++D + +L +S N L ++ G + +W S
Sbjct: 325 GGGDRTIKFWNTHTGACLNSVDTGSQVCSLLWSKNERELLSSHGFTQNQLTLWKYPSMVK 384
Query: 493 VEELRPEIINQTQTSKTDPPQCLSLAWSTDGQTLFAGYSDNTIRVWQV 636
+ EL T T + L +A S DG T+ + D T+R W V
Sbjct: 385 MAEL---------TGHTS--RVLYMAQSPDGCTVASAAGDETLRFWNV 421
>At4g32990.1 68417.m04692 transducin family protein / WD-40 repeat
family protein HIRA protein, Drosophila melanogaster,
PID:e1250847
Length = 318
Score = 43.2 bits (97), Expect = 2e-04
Identities = 30/128 (23%), Positives = 56/128 (43%), Gaps = 12/128 (9%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQD----DGHSDWVSCVRFSPN 171
H +V SV+++ + + RDK++ +W E GHS+ V V + P
Sbjct: 91 HESEVKSVSWNASGSLLATCGRDKSVWIWEIQPEEDDEFDTIAVLTGHSEDVKMVLWHPT 150
Query: 172 HANPIIVSCGWDRTVKVWHLT------NCKLKINHL--GHSGYLNTVTVSPDGSLCASGG 327
++ SC +D T+K+W NC ++ L GHS + +++ + G +
Sbjct: 151 M--DVLFSCSYDNTIKIWCSEDEDGDYNCVQTLSELNNGHSSTVWSISFNAAGDKMVTCS 208
Query: 328 KDMKAMLW 351
D+ +W
Sbjct: 209 DDLAVKIW 216
Score = 36.3 bits (80), Expect = 0.022
Identities = 43/209 (20%), Positives = 90/209 (43%), Gaps = 36/209 (17%)
Frame = +1
Query: 127 DGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTN------CKL-------------- 246
+GH+D V V ++P A+ +I SC D+TV++W ++ CKL
Sbjct: 17 EGHTDRVWNVAWNPA-ADGVIASCSADKTVRIWEQSSLTRSWTCKLGHRLGSFDGNTCVW 75
Query: 247 --------KINHL-GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL--NDGKHLHTL--- 384
++ L GH + +V+ + GSL A+ G+D +W++ + T+
Sbjct: 76 ENFATDSESVSVLRGHESEVKSVSWNASGSLLATCGRDKSVWIWEIQPEEDDEFDTIAVL 135
Query: 385 -DHNDIITALCFSPNRYWL-CAAFGPSIKIWDLESKEMVEELRPEIINQTQTSKTDPPQC 558
H++ + + + P L ++ +IKIW E ++ + ++ +
Sbjct: 136 TGHSEDVKMVLWHPTMDVLFSCSYDNTIKIWCSEDEDGDYNC---VQTLSELNNGHSSTV 192
Query: 559 LSLAWSTDGQTLFAGYSDNTIRVWQVSIS 645
S++++ G + D +++W+ IS
Sbjct: 193 WSISFNAAGDKMVTCSDDLAVKIWKTDIS 221
>At4g18900.1 68417.m02786 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 461
Score = 42.7 bits (96), Expect = 3e-04
Identities = 46/171 (26%), Positives = 78/171 (45%), Gaps = 14/171 (8%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIV-SGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHAN 180
HTK+V +VA++ +++ SGS D+T+ L + + SD V + + P+ +
Sbjct: 275 HTKEVQAVAWNHYAPEVLLSGSFDQTVVLKDGRQPSHSGFKWSVMSD-VESLAWDPHSEH 333
Query: 181 PIIVSCGWDRTVKVWHLTNCKLKINHL-------GHSGYLNTVTVSPDG-SLCASGGKDM 336
+VS D TVK + + + + GH +V+ + +L A+G KD
Sbjct: 334 SFVVSLE-DGTVKGFDVRQASISASESNPSFTINGHDEAATSVSYNISAPNLLATGSKDR 392
Query: 337 KAMLWDLNDGKHLHTLDHNDIITAL---CFSPNRYWLCAAFG--PSIKIWD 474
LWDL++ + HN L FSP+ +L A G +K+WD
Sbjct: 393 TVKLWDLSNNEPSCIATHNPNAGGLFFIAFSPDNPFLLAMGGVMGELKLWD 443
Score = 28.3 bits (60), Expect = 5.8
Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Frame = +1
Query: 454 PSIKIWDLES-KEMVEELRPEIINQTQTSK--TDPPQCLSLAWSTDGQTLFAGYS-DNTI 621
P+I+IWDL++ +M+ ++ N+ K + L LAW+ + + + A S D +
Sbjct: 199 PTIEIWDLDAWFDMLPCVQLGGQNKEGNYKQGSHTRSVLGLAWNKEFRNILASASADKKV 258
Query: 622 RVWQVS 639
+VW V+
Sbjct: 259 KVWDVA 264
>At4g07410.1 68417.m01136 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400) (2
weak); similar to Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 815
Score = 42.7 bits (96), Expect = 3e-04
Identities = 36/119 (30%), Positives = 55/119 (46%), Gaps = 5/119 (4%)
Frame = +1
Query: 19 LSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDD----GHSDWVSCVRFSPNHANP 183
LSV +S D ++I SGS D I+ W+ T Y I G S + CV +
Sbjct: 202 LSVTWSPDAKRIFSGSSDGLIRCWDATSCHEVYRITAGLGGLGSSSEI-CVWSLLSLRCS 260
Query: 184 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLN 360
++VS TV+ W + L H H G +NT+ +P + S G D + +L+ L+
Sbjct: 261 VLVSGDSTGTVQFWDSEHGTLLEAHSNHKGDVNTLAAAPSHNRVFSAGADGQVILYKLS 319
Score = 33.1 bits (72), Expect = 0.20
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 553 QCLSLAWSTDGQTLFAGYSDNTIRVWQVS 639
+ LS+ WS D + +F+G SD IR W +
Sbjct: 200 RALSVTWSPDAKRIFSGSSDGLIRCWDAT 228
>At3g18950.1 68416.m02405 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 473
Score = 42.7 bits (96), Expect = 3e-04
Identities = 25/73 (34%), Positives = 36/73 (49%)
Frame = +1
Query: 133 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSL 312
H D VSC+ S N ++ S WD+T+KVW L++ K + H +NTV D L
Sbjct: 248 HYDAVSCL--SLNEELGLLYSGSWDKTLKVWRLSDSKCLESIQAHDDAINTVAAGFD-DL 304
Query: 313 CASGGKDMKAMLW 351
+G D +W
Sbjct: 305 LFTGSADGTLKVW 317
Score = 31.1 bits (67), Expect = 0.82
Identities = 36/128 (28%), Positives = 52/128 (40%), Gaps = 5/128 (3%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYT--IQDDGHSDWVSCVRFSPNHA 177
H + +VA D+ + +GS D T+K+W + K T + + V +
Sbjct: 290 HDDAINTVAAGFDDL-LFTGSADGTLKVWKRELQGKGTKHFLVNVLMKQENAVTALAVNI 348
Query: 178 NPIIVSCGW-DRTVKVWHLTNCKLKINHL-GHSGYLNTVTVSPDGSLCASGGKDMKAMLW 351
+V CG D TV W L GH L + ++ GSL SGG D +W
Sbjct: 349 TAAVVYCGSSDGTVNFWEGQKYLSHGGTLRGHR--LAVLCLAAAGSLVLSGGADKNICVW 406
Query: 352 DLN-DGKH 372
N DG H
Sbjct: 407 RRNGDGSH 414
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = +1
Query: 52 IVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 225
+ SGS DKT+K+W L++ K H D ++ V + ++ + D T+KVW
Sbjct: 264 LYSGSWDKTLKVWR-LSDSKCLESIQAHDDAINTVAAG---FDDLLFTGSADGTLKVW 317
>At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400); similar to
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]; contains non-consensus (GC) donor splice sites
at introns 4 and 6
Length = 1017
Score = 42.3 bits (95), Expect = 3e-04
Identities = 51/220 (23%), Positives = 94/220 (42%), Gaps = 8/220 (3%)
Frame = +1
Query: 1 DHTKDVL-SVAFSVDNRQIVSGSRDKTIK------LWNTLAECKYTIQDDGHSDWVSCVR 159
++T +V+ S+ F D + K IK L+N + Y + + +S V
Sbjct: 701 NNTSNVICSLGFDRDEDYFATAGVSKKIKIYEFNSLFNESVDIHYPAIEMPNRSKLSGVC 760
Query: 160 FSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPD-GSLCASGGKDM 336
++ N+ + S +D VK+W +T + + + H +V S + ASG D
Sbjct: 761 WN-NYIRNYLASSDYDGIVKLWDVTTGQAISHFIEHEKRAWSVDFSEACPTKLASGSDDC 819
Query: 337 KAMLWDLNDGKHLHTLDHNDIITALCFSPNRYWLCAAFGPSIKIWDLESKEMVEELRPEI 516
LW++N+ L T+ + + + FSP L AFG S + + +LR
Sbjct: 820 SVKLWNINERNCLGTIRNIANVCCVQFSPQSSHL-LAFGSS------DFRTYCYDLRN-- 870
Query: 517 INQTQTSKTDPPQCLSLAWSTDGQTLFAGYSDNTIRVWQV 636
+ + + +S A D +TL +DNT+++W +
Sbjct: 871 LRTPWCILSGHNKAVSYAKFLDNETLVTASTDNTLKLWDL 910
Score = 35.9 bits (79), Expect = 0.029
Identities = 40/151 (26%), Positives = 70/151 (46%), Gaps = 8/151 (5%)
Frame = +1
Query: 52 IVSGSRDKTIKLWN--TLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDR-TVKV 222
+ S D +KLW+ T + I+ + + W V FS A P ++ G D +VK+
Sbjct: 769 LASSDYDGIVKLWDVTTGQAISHFIEHEKRA-W--SVDFS--EACPTKLASGSDDCSVKL 823
Query: 223 WHLT--NCKLKINHLGHSGYLNTVTVSPDGS-LCASGGKDMKAMLWDLNDGKHLHTL--D 387
W++ NC I ++ + + V SP S L A G D + +DL + + +
Sbjct: 824 WNINERNCLGTIRNIAN---VCCVQFSPQSSHLLAFGSSDFRTYCYDLRNLRTPWCILSG 880
Query: 388 HNDIITALCFSPNRYWLCAAFGPSIKIWDLE 480
HN ++ F N + A+ ++K+WDL+
Sbjct: 881 HNKAVSYAKFLDNETLVTASTDNTLKLWDLK 911
>At1g29260.1 68414.m03578 peroxisomal targeting signal type 2
receptor (PEX7) identical to peroxisomal targeting
signal type 2 receptor (Pex7p) (GI:9502414) [Arabidopsis
thaliana]; WD-40 repeat protein family member; contains
6 WD-40 repeats (PF00400); similar to peroxismal
targeting signal 2 receptor (PTS2R) (Peroxin-7)
(PEX7)(SP:O00628) [Homo sapiens]
Length = 317
Score = 42.3 bits (95), Expect = 3e-04
Identities = 33/119 (27%), Positives = 58/119 (48%), Gaps = 3/119 (2%)
Frame = +1
Query: 4 HTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHAN 180
H ++LS ++ D+ + + S DKT+K+W+ + +GH V V+FSP H
Sbjct: 191 HDFEILSCDWNKYDDCILATSSVDKTVKVWDVRSYRVPLAVLNGHGYAVRKVKFSP-HRR 249
Query: 181 PIIVSCGWDRTVKVW-HLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAMLW 351
+I SC +D +V +W ++ L + H+ + + +S L AS G D +W
Sbjct: 250 SLIASCSYDMSVCLWDYMVEDALVGRYDHHTEFAVGIDMSVLVEGLMASTGWDELVYVW 308
Score = 38.7 bits (86), Expect = 0.004
Identities = 33/151 (21%), Positives = 65/151 (43%), Gaps = 7/151 (4%)
Frame = +1
Query: 52 IVSGSRDKTIKLWNT-LAECKYTIQD-DGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 225
+++ D ++K+++T L I+ H+ V V ++P + + S WD TVK+W
Sbjct: 76 LIAAIGDGSVKIYDTALPPPSNPIRSFQEHAREVQSVDYNPTRRDSFLTS-SWDDTVKLW 134
Query: 226 HLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAMLWDLNDGKHLHTLDHNDII 402
+ H+ + +P G + AS D +WD+ + + +D
Sbjct: 135 AMDRPASVRTFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVREPGSTMIIPAHDFE 194
Query: 403 TALCFSPNRYWLC----AAFGPSIKIWDLES 483
C N+Y C ++ ++K+WD+ S
Sbjct: 195 ILSC-DWNKYDDCILATSSVDKTVKVWDVRS 224
Score = 38.7 bits (86), Expect = 0.004
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 2/101 (1%)
Frame = +1
Query: 58 SGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTN 237
S S D T+++W+ + E T+ H + ++ + + I+ + D+TVKVW + +
Sbjct: 167 SASGDCTLRIWD-VREPGSTMIIPAHDFEILSCDWN-KYDDCILATSSVDKTVKVWDVRS 224
Query: 238 CKLKINHLGHSGY-LNTVTVSPD-GSLCASGGKDMKAMLWD 354
++ + L GY + V SP SL AS DM LWD
Sbjct: 225 YRVPLAVLNGHGYAVRKVKFSPHRRSLIASCSYDMSVCLWD 265
>At1g27470.1 68414.m03349 transducin-related / WD-40 repeat
protein-related contains 6 WD-40 repeats (PF00400) (2
weak); related to KIAA1988 protein (GI:18916910) [Homo
sapiens]
Length = 810
Score = 42.3 bits (95), Expect = 3e-04
Identities = 35/124 (28%), Positives = 56/124 (45%), Gaps = 4/124 (3%)
Frame = +1
Query: 7 TKDVLSVAFSVDNRQIVSGSRDKTIKLW--NTLAEC-KYTIQDDGHSDWVS-CVRFSPNH 174
T LSV +S D ++I SGS D I+ W N E + T+ G + C+ +
Sbjct: 198 TGRALSVTWSADAQRIFSGSSDGLIRCWDANLCHEVYRITVGLGGLGNGSELCIWSLLSL 257
Query: 175 ANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 354
++VS +V+ W + L H H G +N + SP + S G D + +L+
Sbjct: 258 RYGVLVSGDSTGSVQFWDSQHGTLLQAHSNHKGDVNALAASPSHNRVFSAGADGQVILYK 317
Query: 355 LNDG 366
L+ G
Sbjct: 318 LSGG 321
Score = 35.9 bits (79), Expect = 0.029
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 553 QCLSLAWSTDGQTLFAGYSDNTIRVWQVSI 642
+ LS+ WS D Q +F+G SD IR W ++
Sbjct: 200 RALSVTWSADAQRIFSGSSDGLIRCWDANL 229
>At3g51930.1 68416.m05696 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
myosin heavy chain kinase B (SP:P90648)(GI:1903458)
[Dictyostelium discoideum]
Length = 415
Score = 41.9 bits (94), Expect = 4e-04
Identities = 27/83 (32%), Positives = 42/83 (50%)
Frame = +1
Query: 133 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSL 312
H+D +SC+ HA II S WD+T+KVW L++ K + H +N + V+ DG +
Sbjct: 173 HADSISCLAV---HAG-IIYSGSWDKTLKVWRLSDLKCLESIKAHDDAINGL-VAGDGRV 227
Query: 313 CASGGKDMKAMLWDLNDGKHLHT 381
S D K +W K + +
Sbjct: 228 -YSASADGKVKIWGKEKRKQIES 249
Score = 40.7 bits (91), Expect = 0.001
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 5/68 (7%)
Frame = +1
Query: 37 VDNRQIVSGSRDKTIKLWN---TLAECKYTIQDDGHSDWVSCVRFSPNH--ANPIIVSCG 201
V + SGS DK+I LW T CK+ + GH V C++ SPN+ A ++ S G
Sbjct: 326 VVGEMVCSGSADKSIGLWRREVTGMLCKFGV-IHGHEGPVKCLQASPNNVGAGFMLYSGG 384
Query: 202 WDRTVKVW 225
D++++VW
Sbjct: 385 LDKSLRVW 392
Score = 32.7 bits (71), Expect = 0.27
Identities = 55/221 (24%), Positives = 88/221 (39%), Gaps = 26/221 (11%)
Frame = +1
Query: 52 IVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHL 231
I SGS DKT+K+W L++ K H D ++ + + S D VK+W
Sbjct: 187 IYSGSWDKTLKVWR-LSDLKCLESIKAHDDAINGLVAGDGR----VYSASADGKVKIWGK 241
Query: 232 TNCK--------------LKINHLGHSGY-LNTVTVSPDGSLCASGGKDMKAMLWDLNDG 366
K LK G + +N+V VS DG+ GG D + W+ +
Sbjct: 242 EKRKQIESTSSSSSSLHVLKATLEGRAEVSVNSVVVSGDGNWVYGGGSDGFVIGWEKKEK 301
Query: 367 K--------HLHTLDHNDIITALCFSPNRYWLCA-AFGPSIKIWDLESKEMVEELRPEII 519
+ T HN + LC +C+ + SI +W E M+ + +I
Sbjct: 302 EGDFEEWRLGFETRGHN--MAVLCMCVVGEMVCSGSADKSIGLWRREVTGML--CKFGVI 357
Query: 520 NQTQTSKTDPPQCLSLAWSTDGQ--TLFAGYSDNTIRVWQV 636
+ P +CL + + G L++G D ++RVW V
Sbjct: 358 H----GHEGPVKCLQASPNNVGAGFMLYSGGLDKSLRVWWV 394
>At3g10530.1 68416.m01264 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400); BING4
(gi:3811380) {Mus musculus]; similar to hypothetical
protein GB:P40055 [Saccharomyces cerevisiae]
Length = 536
Score = 41.9 bits (94), Expect = 4e-04
Identities = 26/86 (30%), Positives = 43/86 (50%)
Frame = +1
Query: 211 TVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDH 390
TV +W T+ + H G +++V P+G L A+ GK+ K +WDL + + T+ H
Sbjct: 262 TVTMWKPTSQAPLVQMQCHPGPVSSVAFHPNGHLMATSGKERKIKIWDLRKFEEVQTI-H 320
Query: 391 NDIITALCFSPNRYWLCAAFGPSIKI 468
+ L FS + L A G ++I
Sbjct: 321 SFHAKTLSFS-QKGLLAAGTGSFVQI 345
Score = 29.5 bits (63), Expect = 2.5
Identities = 29/123 (23%), Positives = 51/123 (41%), Gaps = 3/123 (2%)
Frame = +1
Query: 145 VSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASG 324
V+ +RF NH ++ S + +T+ + + G + + V+P S+ G
Sbjct: 200 VARLRFLKNHF--LLASVNMSGQLHYQDVTHGGMVASIRTGKGRTDVMEVNPYNSVVGLG 257
Query: 325 GKDMKAMLWDLNDGKHLHTLD-HNDIITALCFSPNRYWLCAAFGPS--IKIWDLESKEMV 495
+W L + H ++++ F PN + L A G IKIWDL E V
Sbjct: 258 HSGGTVTMWKPTSQAPLVQMQCHPGPVSSVAFHPNGH-LMATSGKERKIKIWDLRKFEEV 316
Query: 496 EEL 504
+ +
Sbjct: 317 QTI 319
>At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4
protein (ZFWD4) contains 6 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd4 protein (GI:12057170)
[Arabidopsis thaliana]
Length = 419
Score = 41.5 bits (93), Expect = 6e-04
Identities = 53/216 (24%), Positives = 100/216 (46%), Gaps = 10/216 (4%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDDGHSDWVSCVRFSPNHAN 180
H K++ +A + ++ S S D T+++W+ +C ++I D + S + P
Sbjct: 130 HNKELKGIALPEGSDKLFSVSIDGTLRVWDCNSGQCVHSINLDAEAG--SLISEGP---- 183
Query: 181 PIIVSCGWDRTVKVWHL-TNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLW-- 351
V G +K +++ T+ L + G G +N +T++ +G L A G ++W
Sbjct: 184 --WVFLGLPNAIKAFNVQTSQDLHLQAAGVVGQVNAMTIA-NGMLFA-GTSSGSILVWKA 239
Query: 352 ----DLNDGKHLHTLD-HNDIITALCFSPNRYWL-CAAFGPSIKIWDLESKEMVEELRPE 513
+ + K+L +L+ H+ +T CF+ L + +IK+WDL + + + L+
Sbjct: 240 TTDSESDPFKYLTSLEGHSGEVT--CFAVGGQMLYSGSVDKTIKMWDLNTLQCIMTLKQH 297
Query: 514 IINQTQTSKTDPPQCLSLAWSTDGQTLFAGYSDNTI 621
T TS +CL ++ S DG YS+N I
Sbjct: 298 --TGTVTSLLCWDKCL-ISSSLDGTIKVWAYSENGI 330
Score = 35.5 bits (78), Expect = 0.038
Identities = 29/128 (22%), Positives = 58/128 (45%), Gaps = 3/128 (2%)
Frame = +1
Query: 262 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL-DHNDIITA-LCFSPNRYW 435
GHSG + V G + SG D +WDLN + + TL H +T+ LC+ ++
Sbjct: 256 GHSGEVTCFAVG--GQMLYSGSVDKTIKMWDLNTLQCIMTLKQHTGTVTSLLCW--DKCL 311
Query: 436 LCAAFGPSIKIWDLESKEMVEELRPEIINQTQTSKTDPPQCLSLAWSTDGQ-TLFAGYSD 612
+ ++ +IK+W +++ + QT+ + LS + + +F Y +
Sbjct: 312 ISSSLDGTIKVWAYSENGILK------VVQTRRQEQSSVHALSGMHDAEAKPIIFCSYQN 365
Query: 613 NTIRVWQV 636
T+ ++ +
Sbjct: 366 GTVGIFDL 373
>At3g53390.1 68416.m05892 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 558
Score = 41.5 bits (93), Expect = 6e-04
Identities = 17/56 (30%), Positives = 34/56 (60%)
Frame = +1
Query: 16 VLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 183
+L ++S+D + I++G D +++W+ + + K +GH+ WVS V F N ++P
Sbjct: 348 LLCCSWSMDGKYILTGGEDDLVQVWS-MEDRKVVAWGEGHNSWVSGVAFDSNWSSP 402
Score = 34.3 bits (75), Expect = 0.088
Identities = 34/136 (25%), Positives = 60/136 (44%), Gaps = 15/136 (11%)
Frame = +1
Query: 145 VSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASG 324
++ + FS + A+ + + G D ++++ KL + G L + S DG +G
Sbjct: 306 INSIAFSNDGAH--LATVGRDGYLRIFDFLTQKLVCGGKSYYGALLCCSWSMDGKYILTG 363
Query: 325 GKDMKAMLWDLNDGKHLHTLD-HNDIITALCF-----SPNR----YWLCAAFG-----PS 459
G+D +W + D K + + HN ++ + F SPN + FG
Sbjct: 364 GEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSNWSSPNSDGSGEHVMYRFGSVGQDTQ 423
Query: 460 IKIWDLESKEMVEELR 507
+ +WDLE E+V LR
Sbjct: 424 LLLWDLEMDEIVVPLR 439
Score = 33.1 bits (72), Expect = 0.20
Identities = 33/125 (26%), Positives = 59/125 (47%), Gaps = 13/125 (10%)
Frame = +1
Query: 22 SVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCG 201
S+AFS D + + RD +++++ L + K + + C +S + I++ G
Sbjct: 308 SIAFSNDGAHLATVGRDGYLRIFDFLTQ-KLVCGGKSYYGALLCCSWSMD--GKYILTGG 364
Query: 202 WDRTVKVWHLTNCKLKINHLGHSGYLNTVTV-----SP--DGS------LCASGGKDMKA 342
D V+VW + + K+ GH+ +++ V SP DGS S G+D +
Sbjct: 365 EDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSNWSSPNSDGSGEHVMYRFGSVGQDTQL 424
Query: 343 MLWDL 357
+LWDL
Sbjct: 425 LLWDL 429
Score = 27.9 bits (59), Expect = 7.7
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +1
Query: 559 LSLAWSTDGQTLFAGYSDNTIRVWQV 636
L +WS DG+ + G D+ ++VW +
Sbjct: 349 LCCSWSMDGKYILTGGEDDLVQVWSM 374
>At5g66240.2 68418.m08345 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 331
Score = 41.1 bits (92), Expect = 8e-04
Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 3/121 (2%)
Frame = +1
Query: 1 DHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL-AECKYTIQDDGHSDWVSCVRFSPNHA 177
D+ + S+ F + +V+ S D +I+L++ A C TI + V V F+ +H
Sbjct: 31 DYNCRISSIDFHKTSTCMVTASDDDSIRLYDVASATCLKTINSKKYG--VDLVCFT-SHP 87
Query: 178 NPIIVSC--GWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 351
+I S GWD ++++ L + K GH + ++++ G SG D +LW
Sbjct: 88 TTVIYSSRNGWDDSLRLLSLHDNKYLRYFKGHHDRVVSLSLCSGGECFISGSLDRTVLLW 147
Query: 352 D 354
D
Sbjct: 148 D 148
>At5g66240.1 68418.m08344 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 328
Score = 41.1 bits (92), Expect = 8e-04
Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 3/121 (2%)
Frame = +1
Query: 1 DHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL-AECKYTIQDDGHSDWVSCVRFSPNHA 177
D+ + S+ F + +V+ S D +I+L++ A C TI + V V F+ +H
Sbjct: 28 DYNCRISSIDFHKTSTCMVTASDDDSIRLYDVASATCLKTINSKKYG--VDLVCFT-SHP 84
Query: 178 NPIIVSC--GWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 351
+I S GWD ++++ L + K GH + ++++ G SG D +LW
Sbjct: 85 TTVIYSSRNGWDDSLRLLSLHDNKYLRYFKGHHDRVVSLSLCSGGECFISGSLDRTVLLW 144
Query: 352 D 354
D
Sbjct: 145 D 145
>At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2
protein (ZFWD2), putative 99.8% identical to zfwd2
protein (GI:12057166) [Arabidopsis thaliana]; contains 6
copies (2 weak) Pfam PF00400: WD domain, G-beta repeat;
contains Pfam PF00642: Zinc finger C-x8-C-x5-C-x3-H type
(and similar) domain
Length = 437
Score = 41.1 bits (92), Expect = 8e-04
Identities = 48/216 (22%), Positives = 92/216 (42%), Gaps = 7/216 (3%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA-ECKYTIQDDGHSDWVSCVRFSPNHAN 180
H K V +A + ++ +GS+D+T+++W+ + +C ++ G + CV
Sbjct: 150 HEKLVSGIALPSGSDKLYTGSKDETLRVWDCASGQCTGVLKLGGE---IGCVL----SEG 202
Query: 181 PIIVSCGWDRTVKVWHL-TNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 357
P ++ G VK W++ TN ++ G G + ++ V D L +G +D + W
Sbjct: 203 PWLL-VGMPNLVKAWNIETNADQSLS--GPVGQVYSLVVGTD--LLFAGTQDGSILAWRY 257
Query: 358 NDGKH-----LHTLDHNDIITALCFSPNRYWLCAAFGPSIKIWDLESKEMVEELRPEIIN 522
N + H + L NR + + +IK+W L++ + +
Sbjct: 258 NAATNCFEPSASLTGHTLAVVTLYVGANRLY-SGSMDKTIKVWSLDNLQCI--------- 307
Query: 523 QTQTSKTDPPQCLSLAWSTDGQTLFAGYSDNTIRVW 630
QT T + L + W Q L + DNT+++W
Sbjct: 308 QTLTDHSSVVMSL-ICWD---QFLLSCSLDNTVKIW 339
Score = 31.5 bits (68), Expect = 0.62
Identities = 30/124 (24%), Positives = 44/124 (35%)
Frame = +1
Query: 262 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCFSPNRYWLC 441
GH ++ + + +G KD +WD G+ L I C WL
Sbjct: 149 GHEKLVSGIALPSGSDKLYTGSKDETLRVWDCASGQCTGVLKLGGEIG--CVLSEGPWLL 206
Query: 442 AAFGPSIKIWDLESKEMVEELRPEIINQTQTSKTDPPQCLSLAWSTDGQTLFAGYSDNTI 621
+K W++E+ N Q+ Q SL TD LFAG D +I
Sbjct: 207 VGMPNLVKAWNIET------------NADQSLSGPVGQVYSLVVGTD--LLFAGTQDGSI 252
Query: 622 RVWQ 633
W+
Sbjct: 253 LAWR 256
>At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; WD-repeat protein, carrot, PIR:T14352
Length = 444
Score = 41.1 bits (92), Expect = 8e-04
Identities = 52/220 (23%), Positives = 90/220 (40%), Gaps = 14/220 (6%)
Frame = +1
Query: 16 VLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVS 195
V S+ ++ D + G + ++LW+ ++ + GH V + + NH I+ +
Sbjct: 171 VTSINWTQDGLDLAVGLDNSEVQLWDCVSNRQVRTLRGGHESRVGSLAWD-NH---ILTT 226
Query: 196 CGWD-RTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD--LNDG 366
G D + V + +LGH+ + + S G+ ASGG D +WD L
Sbjct: 227 GGMDGKIVNNDVRIRSSIVETYLGHTEEVCGLKWSESGNKQASGGNDNVVHIWDRSLASS 286
Query: 367 KH----LHTL-DHNDIITALCFSPNRYWLCAAFG----PSIKIWDLESKEMVEELRPEII 519
K LH +H + AL + P + L A G IK W+ + +
Sbjct: 287 KQTRQWLHRFEEHTAAVRALAWCPFQASLLATGGGVGDGKIKFWNTHT--------GACL 338
Query: 520 NQTQTSKTDPPQCLSLAWSTDGQTLFA--GYSDNTIRVWQ 633
N +T Q SL WS + L + G++ N + +W+
Sbjct: 339 NSVETGS----QVCSLLWSQSERELLSSHGFTQNQLTLWK 374
Score = 34.7 bits (76), Expect = 0.067
Identities = 37/167 (22%), Positives = 69/167 (41%), Gaps = 9/167 (5%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQ----DDGHSDWVSCVRFSP 168
HT++V + +S + SG D + +W+ +LA K T Q + H+ V + + P
Sbjct: 251 HTEEVCGLKWSESGNKQASGGNDNVVHIWDRSLASSKQTRQWLHRFEEHTAAVRALAWCP 310
Query: 169 NHANPIIVSCG-WDRTVKVWHL-TNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKA 342
A+ + G D +K W+ T L G + S L + G +
Sbjct: 311 FQASLLATGGGVGDGKIKFWNTHTGACLNSVETGSQVCSLLWSQSERELLSSHGFTQNQL 370
Query: 343 MLWDLNDGKHLHTLD-HNDIITALCFSPNRYWLCAAFG-PSIKIWDL 477
LW + L+ H + + SPN + +A G ++++W++
Sbjct: 371 TLWKYPSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLWNV 417
Score = 31.1 bits (67), Expect = 0.82
Identities = 28/128 (21%), Positives = 56/128 (43%), Gaps = 2/128 (1%)
Frame = +1
Query: 271 GYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL--DHNDIITALCFSPNRYWLCA 444
G + ++ + DG A G + + LWD + + TL H + +L + + +
Sbjct: 169 GPVTSINWTQDGLDLAVGLDNSEVQLWDCVSNRQVRTLRGGHESRVGSLAWDNH---ILT 225
Query: 445 AFGPSIKIWDLESKEMVEELRPEIINQTQTSKTDPPQCLSLAWSTDGQTLFAGYSDNTIR 624
G KI + + + +R I+ +T T+ + L WS G +G +DN +
Sbjct: 226 TGGMDGKIVNNDVR-----IRSSIV-ETYLGHTE--EVCGLKWSESGNKQASGGNDNVVH 277
Query: 625 VWQVSISA 648
+W S+++
Sbjct: 278 IWDRSLAS 285
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE 105
HT VL +A S + + S + D+ ++LWN E
Sbjct: 387 HTSRVLFMAQSPNGCTVASAAGDENLRLWNVFGE 420
>At4g00090.1 68417.m00009 transducin family protein / WD-40 repeat
family protein similar to Transducin beta-like 2 protein
(WS beta-transducin repeats protein) (WS-betaTRP)
(Williams-Beuren syndrome chromosome region 13 protein)
(SP:Q9Y4P3) {Homo sapiens}
Length = 430
Score = 41.1 bits (92), Expect = 8e-04
Identities = 28/117 (23%), Positives = 56/117 (47%), Gaps = 3/117 (2%)
Frame = +1
Query: 301 DGSLC-ASGGKDMKAMLWDLNDGKHLHTLDHNDIITALC-FSPN-RYWLCAAFGPSIKIW 471
DGS+ AS + +LW G++L +D N + + SPN R+ AAF +K+W
Sbjct: 207 DGSVVIASCSEGTDIVLWHGKTGRNLGHVDTNQLKNHMAAVSPNGRFLAAAAFTADVKVW 266
Query: 472 DLESKEMVEELRPEIINQTQTSKTDPPQCLSLAWSTDGQTLFAGYSDNTIRVWQVSI 642
++ ++ + + +++ K L +S + + + D +IRVW +++
Sbjct: 267 EIVYQK---DGSVKEVSRVMQLKGHKSAVTWLCFSPNSEQIITASKDGSIRVWNINV 320
Score = 39.1 bits (87), Expect = 0.003
Identities = 28/117 (23%), Positives = 53/117 (45%), Gaps = 11/117 (9%)
Frame = +1
Query: 184 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVT-VSPDGSLCASGGKDMKAMLWDL- 357
+I SC + +WH + + H+ + N + VSP+G A+ +W++
Sbjct: 211 VIASCSEGTDIVLWHGKTGR-NLGHVDTNQLKNHMAAVSPNGRFLAAAAFTADVKVWEIV 269
Query: 358 --NDG------KHLHTLDHNDIITALCFSPN-RYWLCAAFGPSIKIWDLESKEMVEE 501
DG + + H +T LCFSPN + A+ SI++W++ + ++E
Sbjct: 270 YQKDGSVKEVSRVMQLKGHKSAVTWLCFSPNSEQIITASKDGSIRVWNINVRYHLDE 326
Score = 31.9 bits (69), Expect = 0.47
Identities = 16/61 (26%), Positives = 32/61 (52%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 183
H V + FS ++ QI++ S+D +I++WN +Y + +D + V + + NP
Sbjct: 288 HKSAVTWLCFSPNSEQIITASKDGSIRVWN--INVRYHLDEDPKTLKVFPIPLCDSGGNP 345
Query: 184 I 186
+
Sbjct: 346 L 346
Score = 29.9 bits (64), Expect = 1.9
Identities = 33/136 (24%), Positives = 56/136 (41%), Gaps = 7/136 (5%)
Frame = +1
Query: 28 AFSVDNRQIVSGSRDKTIKLWN-------TLAECKYTIQDDGHSDWVSCVRFSPNHANPI 186
A S + R + + + +K+W ++ E +Q GH V+ + FSPN
Sbjct: 246 AVSPNGRFLAAAAFTADVKVWEIVYQKDGSVKEVSRVMQLKGHKSAVTWLCFSPNSEQ-- 303
Query: 187 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 366
I++ D +++VW++ N + HL T+ V P LC SGG + L
Sbjct: 304 IITASKDGSIRVWNI-NVRY---HLDEDP--KTLKVFPI-PLCDSGGNPLHYDRLSLCPE 356
Query: 367 KHLHTLDHNDIITALC 414
+ H + LC
Sbjct: 357 GKILAASHGSTLQWLC 372
>At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1)
identical to phytochrome A supressor spa1 (GI:4809171)
[Arabidopsis thaliana]; contains 8 WD-40 repeats (Pfam
PF00400) (1 weak)
Length = 1029
Score = 41.1 bits (92), Expect = 8e-04
Identities = 45/215 (20%), Positives = 89/215 (41%), Gaps = 7/215 (3%)
Frame = +1
Query: 16 VLSVAFSVDNRQIVSGSRDKTIKLW------NTLAECKYTIQDDGHSDWVSCVRFSPNHA 177
V S++F D I + K IK++ N Y + + + +SCV ++ ++
Sbjct: 719 VCSLSFDPDEEHIAAAGISKKIKIFDFNAFMNESVGVHYPLVEMVNKSKLSCVCWN-SYI 777
Query: 178 NPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAMLWD 354
+ S +D V++W + + H +V SP D + SG D LW
Sbjct: 778 KNYLASTDYDGVVQIWDAGTGQGFSQYTEHQKRAWSVDFSPSDPTKFVSGSDDCSVKLWS 837
Query: 355 LNDGKHLHTLDHNDIITALCFSPNRYWLCAAFGPSIKIWDLESKEMVEELRPEIINQTQT 534
+N+ + L T+ + + FS L A FG + + K +LR +
Sbjct: 838 INEKRSLGTIWSPANVCCVQFSSYSNHLLA-FGSA------DYKVYCYDLR--YVKTPWC 888
Query: 535 SKTDPPQCLSLAWSTDGQTLFAGYSDNTIRVWQVS 639
+ + +S D +T+ + +DN++++W ++
Sbjct: 889 TLAGHEKAVSYVKFMDSETIVSASTDNSLKLWNLN 923
Score = 37.1 bits (82), Expect = 0.012
Identities = 38/122 (31%), Positives = 56/122 (45%), Gaps = 2/122 (1%)
Frame = +1
Query: 1 DHTKDVLSVAFSV-DNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHA 177
+H K SV FS D + VSGS D ++KLW ++ E K ++ V CV+FS +++
Sbjct: 806 EHQKRAWSVDFSPSDPTKFVSGSDDCSVKLW-SINE-KRSLGTIWSPANVCCVQFS-SYS 862
Query: 178 NPIIVSCGWDRTVKVWHLTNCKLKINHL-GHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 354
N ++ D V + L K L GH ++ V D S D LW+
Sbjct: 863 NHLLAFGSADYKVYCYDLRYVKTPWCTLAGHEKAVSYVKFM-DSETIVSASTDNSLKLWN 921
Query: 355 LN 360
LN
Sbjct: 922 LN 923
>At1g03110.1 68414.m00288 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat domain 4 protein (GI:9955698) [Mus
musculus]
Length = 427
Score = 41.1 bits (92), Expect = 8e-04
Identities = 51/204 (25%), Positives = 96/204 (47%), Gaps = 17/204 (8%)
Frame = +1
Query: 79 IKLWNTLAECKYTIQD--DG--HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKL 246
+++++ + C ++ D DG + + +R+S + + VS G D+ VK+W + +
Sbjct: 40 LRIFDLIENCPVSLVDESDGPIRKESIRAIRYSTS--GKLFVSAGDDKLVKIWSADSWRC 97
Query: 247 KINHLGHSGYLNTVTVSPDGS-LCASG--GKDMKAMLWDLNDGKHLHT------LDHN-D 396
+N + ++ V +S D S +C + G L +NDGK L + L H
Sbjct: 98 -LNTVCSEKRVSAVAISSDDSHVCYADKFGVVWVIELDGINDGKTLPSKKGALLLSHYCS 156
Query: 397 IITALCFSPN-RYWLCAA--FGPSIKIWDLESKEMVEELRPEIINQTQTSKTDPPQCLSL 567
IIT+L FSP+ RY L A F + ++ + E E++ + ++ +S
Sbjct: 157 IITSLEFSPDGRYILSADRDFKIRVTVFPKKPLEGAHEIQSFCLGHSEFITCTA--FVST 214
Query: 568 AWSTDGQTLFAGYSDNTIRVWQVS 639
T G L +G D+T+R+W ++
Sbjct: 215 PELTQGY-LMSGSGDSTVRLWDIT 237
>At5g10940.1 68418.m01269 transducin family protein / WD-40 repeat
family protein unnamed ORF cDNA FLJ10872, Homo sapiens,
EMBL:AK001734; contains Pfam PF00400: WD domain, G-beta
repeat (6 copies,1 weak)
Length = 757
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/75 (26%), Positives = 40/75 (53%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 183
H V ++A++ + ++SGS D I +WN + D GH+ + C +F P ++
Sbjct: 49 HQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSIDTGHTANIFCTKFVPETSDE 108
Query: 184 IIVSCGWDRTVKVWH 228
++VS D V++++
Sbjct: 109 LVVSGAGDAEVRLFN 123
Score = 40.3 bits (90), Expect = 0.001
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +1
Query: 262 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALC 414
GH G +N + + +GSL SG D++ +W+ + K LH++D C
Sbjct: 48 GHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSIDTGHTANIFC 98
Score = 28.3 bits (60), Expect = 5.8
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +1
Query: 562 SLAWSTDGQTLFAGYSDNTIRVWQVS 639
+LAW+++G L +G D I +W S
Sbjct: 55 ALAWNSNGSLLISGSDDLRINIWNYS 80
>At4g35140.1 68417.m04996 transducin family protein / WD-40 repeat
family protein contains 6 (3 significant) WD-40 repeats;
similar to PC326 protein (GI:200241) (PIR2:S37694)
[Mus musculus]; Human (H326) mRNA, Homo sapiens,
gb:U06631
Length = 496
Score = 40.3 bits (90), Expect = 0.001
Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 3/102 (2%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDDGHSDWVSCVRFSPNHAN 180
H V +V+F+ + ++SGS D+ + LW+ L K + GH++ V +F P +
Sbjct: 58 HKGCVNTVSFNAEGDVLISGSDDRRVVLWDWQLGNVKLSFH-SGHANNVFQAKFMPFSDD 116
Query: 181 PIIVSCGWDRTV-KVWHLTNCKLKINHLG-HSGYLNTVTVSP 300
IV+C D V + L K++ + LG H G + + + P
Sbjct: 117 RTIVTCAADGMVRRASILEGDKVETSFLGLHQGRAHKLCIEP 158
Score = 35.5 bits (78), Expect = 0.038
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 6/69 (8%)
Frame = +1
Query: 265 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGK---HLHTLDHNDIITA--LCFSPNR 429
H G +NTV+ + +G + SG D + +LWD G H+ N++ A + FS +R
Sbjct: 58 HKGCVNTVSFNAEGDVLISGSDDRRVVLWDWQLGNVKLSFHSGHANNVFQAKFMPFSDDR 117
Query: 430 YWL-CAAFG 453
+ CAA G
Sbjct: 118 TIVTCAADG 126
>At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1135
Score = 40.3 bits (90), Expect = 0.001
Identities = 42/180 (23%), Positives = 76/180 (42%), Gaps = 10/180 (5%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQ--IVSGSRDKTIKLWNTLAECK-YTIQDDGHSDWVSCVRFSPNH 174
H +V +AFS N+Q +V+ DKTIK+W+ + K +T +GH V V
Sbjct: 463 HAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTF--EGHEAPVYSVCPHQKE 520
Query: 175 ANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGG--KDMKAML 348
I S D +K W N ++++ ++ DG+ S G K+ ++ +
Sbjct: 521 NIQFIFSTAVDGKIKAWLYDNMGSRVDYDAPGRSCTSMAYCADGTRLFSCGTSKEGESFI 580
Query: 349 --WDLNDGKHLHT---LDHNDIITALCFSPNRYWLCAAFGPSIKIWDLESKEMVEELRPE 513
W+ ++G T L + + +L A +K WD++S +++ E
Sbjct: 581 VEWNESEGAVKRTYLGLGKRSVGVVQFDTMKNKFLVAGDEFQVKFWDMDSVDLLSSTAAE 640
Score = 36.3 bits (80), Expect = 0.022
Identities = 33/129 (25%), Positives = 60/129 (46%), Gaps = 11/129 (8%)
Frame = +1
Query: 61 GSRDKTI----KLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDR-TVKVW 225
GSR+K + K+W+ LA C +Q S++ + V + ++ + + V ++
Sbjct: 388 GSREKLVSRSFKVWD-LATCTVNLQASLASEYTAAVNRVVWSPDGGLLGVAYSKHIVHIY 446
Query: 226 HLTNCKLKINHL---GHSGYLNTVTVS-PDGSLCA-SGGKDMKAMLWDLNDGKHLHTLD- 387
+ NHL H+G +N + S P+ LC + G+D +WD G LHT +
Sbjct: 447 SYHGGEDLRNHLEIDAHAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTFEG 506
Query: 388 HNDIITALC 414
H + ++C
Sbjct: 507 HEAPVYSVC 515
Score = 30.7 bits (66), Expect = 1.1
Identities = 27/157 (17%), Positives = 62/157 (39%), Gaps = 1/157 (0%)
Frame = +1
Query: 160 FSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMK 339
F P N I + D +++++++ ++K GH + + S ++ S G D +
Sbjct: 894 FHPQDNNIIAIGMD-DSSIQIYNVRVDEVKSKLKGHQKRVTGLAFSNVLNVLVSSGADSQ 952
Query: 340 AMLWDLNDGKHLHTLDHNDIITALCFSPNRYWLCAAFGPSIKIWDLESKEMVEELRPEII 519
+W + DG I + +P + I + + + ++ P++
Sbjct: 953 LCVWSM-DGWEKQASKQIQIPSGHSPNPLAHTRVQFHQDQIHVLVVHASQLAIYEAPKLE 1011
Query: 520 NQTQ-TSKTDPPQCLSLAWSTDGQTLFAGYSDNTIRV 627
N Q K +S D Q+++A + D ++ +
Sbjct: 1012 NMKQWIPKESSGSVTDAVYSCDSQSIYAAFDDGSVSI 1048
>At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1137
Score = 40.3 bits (90), Expect = 0.001
Identities = 42/180 (23%), Positives = 76/180 (42%), Gaps = 10/180 (5%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQ--IVSGSRDKTIKLWNTLAECK-YTIQDDGHSDWVSCVRFSPNH 174
H +V +AFS N+Q +V+ DKTIK+W+ + K +T +GH V V
Sbjct: 463 HAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTF--EGHEAPVYSVCPHQKE 520
Query: 175 ANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGG--KDMKAML 348
I S D +K W N ++++ ++ DG+ S G K+ ++ +
Sbjct: 521 NIQFIFSTAVDGKIKAWLYDNMGSRVDYDAPGRSCTSMAYCADGTRLFSCGTSKEGESFI 580
Query: 349 --WDLNDGKHLHT---LDHNDIITALCFSPNRYWLCAAFGPSIKIWDLESKEMVEELRPE 513
W+ ++G T L + + +L A +K WD++S +++ E
Sbjct: 581 VEWNESEGAVKRTYLGLGKRSVGVVQFDTMKNKFLVAGDEFQVKFWDMDSVDLLSSTAAE 640
Score = 36.3 bits (80), Expect = 0.022
Identities = 33/129 (25%), Positives = 60/129 (46%), Gaps = 11/129 (8%)
Frame = +1
Query: 61 GSRDKTI----KLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDR-TVKVW 225
GSR+K + K+W+ LA C +Q S++ + V + ++ + + V ++
Sbjct: 388 GSREKLVSRSFKVWD-LATCTVNLQASLASEYTAAVNRVVWSPDGGLLGVAYSKHIVHIY 446
Query: 226 HLTNCKLKINHL---GHSGYLNTVTVS-PDGSLCA-SGGKDMKAMLWDLNDGKHLHTLD- 387
+ NHL H+G +N + S P+ LC + G+D +WD G LHT +
Sbjct: 447 SYHGGEDLRNHLEIDAHAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTFEG 506
Query: 388 HNDIITALC 414
H + ++C
Sbjct: 507 HEAPVYSVC 515
Score = 30.7 bits (66), Expect = 1.1
Identities = 27/157 (17%), Positives = 62/157 (39%), Gaps = 1/157 (0%)
Frame = +1
Query: 160 FSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMK 339
F P N I + D +++++++ ++K GH + + S ++ S G D +
Sbjct: 894 FHPQDNNIIAIGMD-DSSIQIYNVRVDEVKSKLKGHQKRVTGLAFSNVLNVLVSSGADSQ 952
Query: 340 AMLWDLNDGKHLHTLDHNDIITALCFSPNRYWLCAAFGPSIKIWDLESKEMVEELRPEII 519
+W + DG I + +P + I + + + ++ P++
Sbjct: 953 LCVWSM-DGWEKQASKQIQIPSGHSPNPLAHTRVQFHQDQIHVLVVHASQLAIYEAPKLE 1011
Query: 520 NQTQ-TSKTDPPQCLSLAWSTDGQTLFAGYSDNTIRV 627
N Q K +S D Q+++A + D ++ +
Sbjct: 1012 NMKQWIPKESSGSVTDAVYSCDSQSIYAAFDDGSVSI 1048
>At5g27945.1 68418.m03364 transducin family protein / WD-40 repeat
family protein fizzy-related (FZR); contains 6 WD-40
repeats (PF00400); WD-repeat protein,
carrot,(gi:2253631) PIR:T14352
Length = 428
Score = 39.9 bits (89), Expect = 0.002
Identities = 36/150 (24%), Positives = 68/150 (45%), Gaps = 4/150 (2%)
Frame = +1
Query: 211 TVKVWHLTNCKLK--INHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL 384
TV +W ++C + +G + ++ + DG A G + + +WD +H+ TL
Sbjct: 131 TVYLWDASSCYTSKLVTIDDENGPVTSINWTQDGLDLAVGLDNSEVQVWDCVSNRHVRTL 190
Query: 385 --DHNDIITALCFSPNRYWLCAAFGPSIKIWDLESKEMVEELRPEIINQTQTSKTDPPQC 558
H + +L + N + L G KI + + + +R II T T+ +
Sbjct: 191 RGGHESRVGSLAW--NNHILTTG-GMDGKIVNNDVR-----IRSSIIG-TYVGHTE--EV 239
Query: 559 LSLAWSTDGQTLFAGYSDNTIRVWQVSISA 648
L WS G+ L +G +DN + +W S+++
Sbjct: 240 CGLKWSESGKKLASGGNDNVVHIWDRSLAS 269
Score = 35.9 bits (79), Expect = 0.029
Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 6/151 (3%)
Frame = +1
Query: 202 WDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGK--DMKAMLWDLNDGKH 372
WDR++ + T L H+ + + P SL A+GG D K W+ + G
Sbjct: 263 WDRSLASSNPTRQWLH-RFEEHTAAVRALAWCPFQASLLATGGGVGDGKINFWNTHTGAC 321
Query: 373 LHTLDHNDIITALCFSPNRYWLCAAFG---PSIKIWDLESKEMVEELRPEIINQTQTSKT 543
L++++ + +L +S + L +A G + +W S + EL TS+
Sbjct: 322 LNSVETGSQVCSLLWSKSERELLSAHGFTQNQLTLWKYPSMVKMAELNGH------TSRV 375
Query: 544 DPPQCLSLAWSTDGQTLFAGYSDNTIRVWQV 636
L +A S DG T+ + D T+R+W V
Sbjct: 376 -----LFMAQSPDGCTVASAAGDETLRLWNV 401
Score = 32.7 bits (71), Expect = 0.27
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE 105
HT VL +A S D + S + D+T++LWN E
Sbjct: 371 HTSRVLFMAQSPDGCTVASAAGDETLRLWNVFGE 404
Score = 31.1 bits (67), Expect = 0.82
Identities = 35/167 (20%), Positives = 69/167 (41%), Gaps = 9/167 (5%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQ----DDGHSDWVSCVRFSP 168
HT++V + +S +++ SG D + +W+ +LA T Q + H+ V + + P
Sbjct: 235 HTEEVCGLKWSESGKKLASGGNDNVVHIWDRSLASSNPTRQWLHRFEEHTAAVRALAWCP 294
Query: 169 NHANPIIVSCG-WDRTVKVWHL-TNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKA 342
A+ + G D + W+ T L G + S L A G +
Sbjct: 295 FQASLLATGGGVGDGKINFWNTHTGACLNSVETGSQVCSLLWSKSERELLSAHGFTQNQL 354
Query: 343 MLWDLNDGKHLHTLD-HNDIITALCFSPNRYWLCAAFG-PSIKIWDL 477
LW + L+ H + + SP+ + +A G ++++W++
Sbjct: 355 TLWKYPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNV 401
>At4g01860.2 68417.m00244 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 39.9 bits (89), Expect = 0.002
Identities = 32/132 (24%), Positives = 61/132 (46%), Gaps = 4/132 (3%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHS--DWVSCVRFSPNHA 177
H + + +S+D +IVS S D++ ++W ++ GHS W C+ +
Sbjct: 234 HEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGHSVRVWDCCI------S 287
Query: 178 NPIIVSCGWDRTVKVWHLTNCKLKI--NHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 351
+ +IV+ G D T +VW + +L++ H+G + P+ SL + G D +
Sbjct: 288 DSLIVTAGEDCTCRVWGVDGTQLEVIKEHIGRG--IWRCLYDPNSSLLVTAGFDSAIKVH 345
Query: 352 DLNDGKHLHTLD 387
L++ +LD
Sbjct: 346 QLHNRGSETSLD 357
>At4g01860.1 68417.m00243 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 39.9 bits (89), Expect = 0.002
Identities = 32/132 (24%), Positives = 61/132 (46%), Gaps = 4/132 (3%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHS--DWVSCVRFSPNHA 177
H + + +S+D +IVS S D++ ++W ++ GHS W C+ +
Sbjct: 234 HEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGHSVRVWDCCI------S 287
Query: 178 NPIIVSCGWDRTVKVWHLTNCKLKI--NHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 351
+ +IV+ G D T +VW + +L++ H+G + P+ SL + G D +
Sbjct: 288 DSLIVTAGEDCTCRVWGVDGTQLEVIKEHIGRG--IWRCLYDPNSSLLVTAGFDSAIKVH 345
Query: 352 DLNDGKHLHTLD 387
L++ +LD
Sbjct: 346 QLHNRGSETSLD 357
>At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; similar to "Will die slowly" protein,
Drosophia; putative cdc20 protein - Arabidopsis
thaliana, EMBL:AF029262
Length = 411
Score = 39.5 bits (88), Expect = 0.002
Identities = 50/221 (22%), Positives = 89/221 (40%), Gaps = 15/221 (6%)
Frame = +1
Query: 16 VLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVS 195
V S+ ++ D + G + ++LW+ ++ + GH V + ++ NH I+ +
Sbjct: 137 VTSINWTQDGLDLAIGLDNSEVQLWDCVSNRQVRTLRGGHESRVGSLAWN-NH---ILTT 192
Query: 196 CGWD-RTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND--- 363
G D + V + +LGH+ + + S G ASGG D +WD
Sbjct: 193 GGMDGKIVNNDVRIRSSIVETYLGHTEEVCGLKWSESGKKLASGGNDNVVHIWDHRSVAS 252
Query: 364 ----GKHLHTL-DHNDIITALCFSPNRYWLCAAFG----PSIKIWDLESKEMVEELRPEI 516
+ LH +H + AL + P + L A G IK W+ +
Sbjct: 253 SNPTRQWLHRFEEHTAAVRALAWCPFQASLLATGGGVGDGKIKFWNTHT--------GAC 304
Query: 517 INQTQTSKTDPPQCLSLAWSTDGQTLFA--GYSDNTIRVWQ 633
+N +T Q SL WS + L + G++ N + +W+
Sbjct: 305 LNSVETGS----QVCSLLWSKSERELLSSHGFTQNQLTLWK 341
Score = 34.7 bits (76), Expect = 0.067
Identities = 33/130 (25%), Positives = 58/130 (44%), Gaps = 6/130 (4%)
Frame = +1
Query: 265 HSGYLNTVTVSP-DGSLCASGGK--DMKAMLWDLNDGKHLHTLDHNDIITALCFSPNRYW 435
H+ + + P SL A+GG D K W+ + G L++++ + +L +S +
Sbjct: 266 HTAAVRALAWCPFQASLLATGGGVGDGKIKFWNTHTGACLNSVETGSQVCSLLWSKSERE 325
Query: 436 LCAAFG---PSIKIWDLESKEMVEELRPEIINQTQTSKTDPPQCLSLAWSTDGQTLFAGY 606
L ++ G + +W S + EL TS+ L +A S DG T+ +
Sbjct: 326 LLSSHGFTQNQLTLWKYPSMVKMAELNGH------TSRV-----LFMAQSPDGCTVASAA 374
Query: 607 SDNTIRVWQV 636
D T+R+W V
Sbjct: 375 GDETLRLWNV 384
Score = 32.7 bits (71), Expect = 0.27
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 2/122 (1%)
Frame = +1
Query: 271 GYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL--DHNDIITALCFSPNRYWLCA 444
G + ++ + DG A G + + LWD + + TL H + +L + N + L
Sbjct: 135 GPVTSINWTQDGLDLAIGLDNSEVQLWDCVSNRQVRTLRGGHESRVGSLAW--NNHILTT 192
Query: 445 AFGPSIKIWDLESKEMVEELRPEIINQTQTSKTDPPQCLSLAWSTDGQTLFAGYSDNTIR 624
G KI + + + +R I+ +T T+ + L WS G+ L +G +DN +
Sbjct: 193 G-GMDGKIVNNDVR-----IRSSIV-ETYLGHTE--EVCGLKWSESGKKLASGGNDNVVH 243
Query: 625 VW 630
+W
Sbjct: 244 IW 245
Score = 32.7 bits (71), Expect = 0.27
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE 105
HT VL +A S D + S + D+T++LWN E
Sbjct: 354 HTSRVLFMAQSPDGCTVASAAGDETLRLWNVFGE 387
Score = 29.9 bits (64), Expect = 1.9
Identities = 34/168 (20%), Positives = 70/168 (41%), Gaps = 10/168 (5%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN--TLAECKYTIQ----DDGHSDWVSCVRFS 165
HT++V + +S +++ SG D + +W+ ++A T Q + H+ V + +
Sbjct: 217 HTEEVCGLKWSESGKKLASGGNDNVVHIWDHRSVASSNPTRQWLHRFEEHTAAVRALAWC 276
Query: 166 PNHANPIIVSCG-WDRTVKVWHL-TNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMK 339
P A+ + G D +K W+ T L G + S L + G +
Sbjct: 277 PFQASLLATGGGVGDGKIKFWNTHTGACLNSVETGSQVCSLLWSKSERELLSSHGFTQNQ 336
Query: 340 AMLWDLNDGKHLHTLD-HNDIITALCFSPNRYWLCAAFG-PSIKIWDL 477
LW + L+ H + + SP+ + +A G ++++W++
Sbjct: 337 LTLWKYPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNV 384
>At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6
WD-40 repeats (PF0400); identical to WD-40 repeat
protein (SP:O22467) [Arabidopsis thaliana]
Length = 424
Score = 39.1 bits (87), Expect = 0.003
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVS-GSRDKTIKLWN--TLAECKYTIQDDGHSDWVSCVRFSPNH 174
H+ +V +AF+ N +V+ GS DKT+KL++ L+ +T D H + V V ++P +
Sbjct: 272 HSMEVNCLAFNPFNEWVVATGSTDKTVKLFDLRKLSTALHTF--DSHKEEVFQVGWNPKN 329
Query: 175 ANPIIVSCGWDRTVKVWHLT 234
I+ SC R + VW L+
Sbjct: 330 -ETILASCCLGRRLMVWDLS 348
>At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to pre-mRNA splicing
factor PRP17 (SP:O60508) [Homo sapiens]
Length = 457
Score = 38.7 bits (86), Expect = 0.004
Identities = 30/128 (23%), Positives = 59/128 (46%), Gaps = 3/128 (2%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIV-SGSRDKTIKLWNTLAECKYTIQDDGHSDW-VSCVRFSPNHA 177
HTK V ++ +S + ++ S D + +WN + K ++ H + V V++S
Sbjct: 159 HTKAVTAIDWSTSHVHLLASAGLDGAVYVWNVWSNDKKKVRAFLHHNAPVKDVKWSKQGL 218
Query: 178 NPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDG-SLCASGGKDMKAMLWD 354
+ ++SCG+D T +++ + ++ + V PD ++ SGG LWD
Sbjct: 219 S--LLSCGYDCTSRLFDVER-GVETQSFKEDEVVGVVKFHPDNCNVFLSGGSKGSLRLWD 275
Query: 355 LNDGKHLH 378
+ K +H
Sbjct: 276 IRANKFVH 283
Score = 28.3 bits (60), Expect = 5.8
Identities = 28/126 (22%), Positives = 50/126 (39%), Gaps = 13/126 (10%)
Frame = +1
Query: 16 VLSVAFSVDNRQIVSGS-------RDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNH 174
+L V F +Q +S S + + +W+ E + Q + C++ P
Sbjct: 292 ILDVEFIAGGKQFISSSDVSGRNISENAVIVWDISREVPLSNQVYVEAYTCPCIKRHPQ- 350
Query: 175 ANPIIVSCGWDRTVKVWHLTNCKLKINHL----GH--SGYLNTVTVSPDGSLCASGGKDM 336
+P+ ++ ++ TN K+N GH +G+ SPDG ASG D
Sbjct: 351 -DPVFIAQSHGNYTAIFS-TNPPFKLNKYKRFEGHWVAGFPIKCNFSPDGETLASGSSDG 408
Query: 337 KAMLWD 354
++D
Sbjct: 409 SVYMYD 414
>At4g35370.1 68417.m05025 transducin family protein / WD-40 repeat
family protein contains 4 (3 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 414
Score = 38.7 bits (86), Expect = 0.004
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Frame = +1
Query: 25 VAFSVDNRQIV-SGSRDKTIKLWN-TLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSC 198
+ F+ +NR IV SGS DK +K+W+ +CK T++ H V V ++ N+ +++S
Sbjct: 220 LTFNWENRNIVASGSEDKKVKVWDVATGKCKVTMEH--HEKKVHAVAWN-NYTPEVLLSG 276
Query: 199 GWDRTV 216
DRTV
Sbjct: 277 SRDRTV 282
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +1
Query: 307 SLCASGGKDMKAMLWDLNDGKHLHTLDHND 396
++ ASG +D K +WD+ GK T++H++
Sbjct: 228 NIVASGSEDKKVKVWDVATGKCKVTMEHHE 257
>At4g29860.1 68417.m04250 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400); WDVCF
variant 1 (gi:12006981) [Mus musculus]
Length = 386
Score = 38.7 bits (86), Expect = 0.004
Identities = 31/121 (25%), Positives = 50/121 (41%), Gaps = 3/121 (2%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN---TLAECKYTIQDDGHSDWVSCVRFSPNH 174
H++ VLS++ + +SG D I ++N + C TI+ + + S
Sbjct: 261 HSEPVLSLSVASSCDGGISGGADDKIVMYNLNHSTGSC--TIRKEITLERPGVSGTSIRV 318
Query: 175 ANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 354
I + GWD ++V++ H N V+ SPD L AS +D LW
Sbjct: 319 DGKIAATAGWDHRIRVYNYRKGNALAILKYHRATCNAVSYSPDCELMASASEDATVALWK 378
Query: 355 L 357
L
Sbjct: 379 L 379
Score = 35.5 bits (78), Expect = 0.038
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE-CKYTIQDDGHSDWVSCVRFSPNHAN 180
H V+ V+F + +GS D +++W+T+ + ++ V V SP
Sbjct: 16 HRHSVMDVSFHPSKSLLFTGSADGELRIWDTIQHRAVSSAWAHSRANGVLAVAASPWLGE 75
Query: 181 PIIVSCGWDRTVKVWHL 231
I+S G D TVK W +
Sbjct: 76 DKIISQGRDGTVKCWDI 92
>At2g37160.1 68415.m04559 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 544
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/56 (28%), Positives = 33/56 (58%)
Frame = +1
Query: 16 VLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 183
+L A+S+D + +++G D +++W+ + + K +GH+ WVS V F ++P
Sbjct: 348 LLCCAWSMDGKYLLTGGEDDLVQVWS-MEDRKVVAWGEGHNSWVSGVAFDSYWSSP 402
Score = 33.5 bits (73), Expect = 0.15
Identities = 34/136 (25%), Positives = 59/136 (43%), Gaps = 15/136 (11%)
Frame = +1
Query: 145 VSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASG 324
++ + FS + A + + G D ++++ + KL + G L S DG +G
Sbjct: 306 INSIAFSNDGA--YLATVGRDGYLRIFDFSTQKLVCGVKSYYGALLCCAWSMDGKYLLTG 363
Query: 325 GKDMKAMLWDLNDGKHLHTLD-HNDIITALCF-----SPNRYW----LCAAFG-----PS 459
G+D +W + D K + + HN ++ + F SPN + FG
Sbjct: 364 GEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSSPNSEGSGENVMYRFGSVGQDTQ 423
Query: 460 IKIWDLESKEMVEELR 507
+ +WDLE E+V LR
Sbjct: 424 LLLWDLEMDEIVVPLR 439
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/82 (20%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Frame = +1
Query: 256 HLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD--HNDIITALCFSPNR 429
H+G G +N++ S DG+ A+ G+D ++D + K + + + ++ +
Sbjct: 300 HIGQ-GAINSIAFSNDGAYLATVGRDGYLRIFDFSTQKLVCGVKSYYGALLCCAWSMDGK 358
Query: 430 YWLCAAFGPSIKIWDLESKEMV 495
Y L +++W +E +++V
Sbjct: 359 YLLTGGEDDLVQVWSMEDRKVV 380
Score = 29.9 bits (64), Expect = 1.9
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 559 LSLAWSTDGQTLFAGYSDNTIRVWQV 636
L AWS DG+ L G D+ ++VW +
Sbjct: 349 LCCAWSMDGKYLLTGGEDDLVQVWSM 374
>At1g04140.2 68414.m00404 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 793
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +1
Query: 10 KDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDDGHSDWVSCVRFSPNHANPI 186
+ ++ AFS D R + S D T+K+ + +C + + WV VRF P H+ I
Sbjct: 104 RSTIAAAFSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWV--VRFHPRHSE-I 160
Query: 187 IVSCGWDRTVKVWH 228
+ S D V++W+
Sbjct: 161 VASGSLDHEVRLWN 174
Score = 34.7 bits (76), Expect = 0.067
Identities = 31/118 (26%), Positives = 46/118 (38%), Gaps = 1/118 (0%)
Frame = +1
Query: 187 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS-LCASGGKDMKAMLWDLND 363
+ S D TVK+ K GH V P S + ASG D + LW+
Sbjct: 118 LASTHGDHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVASGSLDHEVRLWNAKT 177
Query: 364 GKHLHTLDHNDIITALCFSPNRYWLCAAFGPSIKIWDLESKEMVEELRPEIINQTQTS 537
G+ + T D I ++ F L A G + IW ++ P I+ +T+ S
Sbjct: 178 GECIRTHDFYRPIASIAFHAGGELLAVASGHKLHIWHYNKGG--DDSAPAIVLKTRRS 233
>At1g04140.1 68414.m00403 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 790
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +1
Query: 10 KDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDDGHSDWVSCVRFSPNHANPI 186
+ ++ AFS D R + S D T+K+ + +C + + WV VRF P H+ I
Sbjct: 104 RSTIAAAFSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWV--VRFHPRHSE-I 160
Query: 187 IVSCGWDRTVKVWH 228
+ S D V++W+
Sbjct: 161 VASGSLDHEVRLWN 174
Score = 34.7 bits (76), Expect = 0.067
Identities = 31/118 (26%), Positives = 46/118 (38%), Gaps = 1/118 (0%)
Frame = +1
Query: 187 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS-LCASGGKDMKAMLWDLND 363
+ S D TVK+ K GH V P S + ASG D + LW+
Sbjct: 118 LASTHGDHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVASGSLDHEVRLWNAKT 177
Query: 364 GKHLHTLDHNDIITALCFSPNRYWLCAAFGPSIKIWDLESKEMVEELRPEIINQTQTS 537
G+ + T D I ++ F L A G + IW ++ P I+ +T+ S
Sbjct: 178 GECIRTHDFYRPIASIAFHAGGELLAVASGHKLHIWHYNKGG--DDSAPAIVLKTRRS 233
>At5g64630.2 68418.m08122 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 487
Score = 38.3 bits (85), Expect = 0.005
Identities = 35/130 (26%), Positives = 54/130 (41%), Gaps = 11/130 (8%)
Frame = +1
Query: 283 TVTVSPDGSLCASGGKDMKAMLWDLNDG---KHLHTLDHNDIIT-------ALCFSPNRY 432
TV P L A+ G D LW +N G K + ++ + +T + FSP+
Sbjct: 18 TVDFHPISGLLATAGADYDIKLWLINSGQAEKKVPSVSYQSSLTYHGCAVNTIRFSPSGE 77
Query: 433 WLCA-AFGPSIKIWDLESKEMVEELRPEIINQTQTSKTDPPQCLSLAWSTDGQTLFAGYS 609
L + A G + IW L E + + + + D L L WS D L +G
Sbjct: 78 LLASGADGGELFIWKLHPSETNQSWK--VHKSLSFHRKD---VLDLQWSPDDAYLISGSV 132
Query: 610 DNTIRVWQVS 639
DN+ +W V+
Sbjct: 133 DNSCIIWDVN 142
Score = 37.5 bits (83), Expect = 0.009
Identities = 22/74 (29%), Positives = 37/74 (50%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 183
H KDVL + +S D+ ++SGS D + +W+ + I D H +V V + P
Sbjct: 111 HRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQIL-DAHCHYVQGVAWDP--LAK 167
Query: 184 IIVSCGWDRTVKVW 225
+ S DRT +++
Sbjct: 168 YVASLSSDRTCRIY 181
Score = 33.9 bits (74), Expect = 0.12
Identities = 40/163 (24%), Positives = 67/163 (41%), Gaps = 18/163 (11%)
Frame = +1
Query: 115 TIQDDGHSDW-VSCVRFSPNHANPIIVSCGWDRTVKVWHLTN--CKLKINHLGHSGYL-- 279
TIQ H V V F P + ++ + G D +K+W + + + K+ + + L
Sbjct: 5 TIQISWHDGKPVLTVDFHP--ISGLLATAGADYDIKLWLINSGQAEKKVPSVSYQSSLTY 62
Query: 280 -----NTVTVSPDGSLCASGGKDMKAMLWDLNDGK-------HLHTLDHNDIITALCFSP 423
NT+ SP G L ASG + +W L+ + H H + L +SP
Sbjct: 63 HGCAVNTIRFSPSGELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSP 122
Query: 424 -NRYWLCAAFGPSIKIWDLESKEMVEELRPEIINQTQTSKTDP 549
+ Y + + S IWD+ +K V ++ + Q DP
Sbjct: 123 DDAYLISGSVDNSCIIWDV-NKGSVHQILDAHCHYVQGVAWDP 164
>At5g64630.1 68418.m08121 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 397
Score = 38.3 bits (85), Expect = 0.005
Identities = 35/130 (26%), Positives = 54/130 (41%), Gaps = 11/130 (8%)
Frame = +1
Query: 283 TVTVSPDGSLCASGGKDMKAMLWDLNDG---KHLHTLDHNDIIT-------ALCFSPNRY 432
TV P L A+ G D LW +N G K + ++ + +T + FSP+
Sbjct: 18 TVDFHPISGLLATAGADYDIKLWLINSGQAEKKVPSVSYQSSLTYHGCAVNTIRFSPSGE 77
Query: 433 WLCA-AFGPSIKIWDLESKEMVEELRPEIINQTQTSKTDPPQCLSLAWSTDGQTLFAGYS 609
L + A G + IW L E + + + + D L L WS D L +G
Sbjct: 78 LLASGADGGELFIWKLHPSETNQSWK--VHKSLSFHRKD---VLDLQWSPDDAYLISGSV 132
Query: 610 DNTIRVWQVS 639
DN+ +W V+
Sbjct: 133 DNSCIIWDVN 142
Score = 37.5 bits (83), Expect = 0.009
Identities = 22/74 (29%), Positives = 37/74 (50%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 183
H KDVL + +S D+ ++SGS D + +W+ + I D H +V V + P
Sbjct: 111 HRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQIL-DAHCHYVQGVAWDP--LAK 167
Query: 184 IIVSCGWDRTVKVW 225
+ S DRT +++
Sbjct: 168 YVASLSSDRTCRIY 181
Score = 33.9 bits (74), Expect = 0.12
Identities = 40/163 (24%), Positives = 67/163 (41%), Gaps = 18/163 (11%)
Frame = +1
Query: 115 TIQDDGHSDW-VSCVRFSPNHANPIIVSCGWDRTVKVWHLTN--CKLKINHLGHSGYL-- 279
TIQ H V V F P + ++ + G D +K+W + + + K+ + + L
Sbjct: 5 TIQISWHDGKPVLTVDFHP--ISGLLATAGADYDIKLWLINSGQAEKKVPSVSYQSSLTY 62
Query: 280 -----NTVTVSPDGSLCASGGKDMKAMLWDLNDGK-------HLHTLDHNDIITALCFSP 423
NT+ SP G L ASG + +W L+ + H H + L +SP
Sbjct: 63 HGCAVNTIRFSPSGELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSP 122
Query: 424 -NRYWLCAAFGPSIKIWDLESKEMVEELRPEIINQTQTSKTDP 549
+ Y + + S IWD+ +K V ++ + Q DP
Sbjct: 123 DDAYLISGSVDNSCIIWDV-NKGSVHQILDAHCHYVQGVAWDP 164
>At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 38.3 bits (85), Expect = 0.005
Identities = 41/179 (22%), Positives = 74/179 (41%), Gaps = 9/179 (5%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQ--IVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHA 177
H V +AF+ N+Q +V+ DK IK+W+ + +T + GH V +
Sbjct: 452 HVGCVNDLAFAHPNKQMCVVTCGDDKLIKVWDLSGKKLFTFE--GHEAPVYSICPHQKEN 509
Query: 178 NPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGG--KDMKAML- 348
I S D +K W N ++++ + T+ S DGS S G K+ + L
Sbjct: 510 IQFIFSTALDGKIKAWLYDNVGSRVDYDAPGQWCTTMLYSADGSRLFSCGTSKEGDSFLV 569
Query: 349 -WDLNDG--KHLHTLDHNDIITALCFSPNR-YWLCAAFGPSIKIWDLESKEMVEELRPE 513
W+ ++G K + + F R +L IK W++++ ++ + E
Sbjct: 570 EWNESEGALKRTYLGFRKKSAGVVQFDTTRNRFLAVGEDNQIKFWNMDNTNLLTVVEAE 628
Score = 33.1 bits (72), Expect = 0.20
Identities = 14/49 (28%), Positives = 28/49 (57%)
Frame = +1
Query: 100 AECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKL 246
++ + ++ D H V+ + F+ + +V+CG D+ +KVW L+ KL
Sbjct: 441 SDLRQHLEIDAHVGCVNDLAFAHPNKQMCVVTCGDDKLIKVWDLSGKKL 489
>At5g23730.1 68418.m02782 transducin family protein / WD-40 repeat
family protein contains similarity to photomorphogenesis
repressor protein; contains Pfam PF00400: WD domain,
G-beta repeat (5 copies)
Length = 243
Score = 37.9 bits (84), Expect = 0.007
Identities = 50/206 (24%), Positives = 84/206 (40%), Gaps = 15/206 (7%)
Frame = +1
Query: 58 SGSRDKTIKLWNTLA---ECKYTIQDDGHS-DWVSCVRFSPNHANPIIVSCGWDRTVKVW 225
SGS D T+++W+ E ++ G V CV F P+ + V C DR V+
Sbjct: 39 SGSDDGTMQVWDPRCPPEESVGVVRPAGICRSAVCCVEFDPSGGPAVAVGCA-DRKGYVY 97
Query: 226 HLTNCKLKINHLGHSGYLNTVTVSP--DGSLCASGGKDMKAMLWDLNDGKHLHT----LD 387
+ KL L G+ TV+ DG + G D LW + DG+ + T ++
Sbjct: 98 DIR--KLVDPALTLQGHTKTVSYVRFLDGGTVVTAGTDGCLKLWSVEDGRVIRTYEGHVN 155
Query: 388 HNDIITALCFSPNRYWLCAAFGPSIKIWDLE--SKEMVEELRPEIINQTQTSKTDPPQCL 561
+ + + + + C + + ++D V+ P +N S +D
Sbjct: 156 NRNFVGLSVWRNGALFGCGSENNRVFVYDRRWGKPVWVDGFEPVGMN----SGSDKRFVS 211
Query: 562 SLAWSTDGQ---TLFAGYSDNTIRVW 630
S+ W G TL AG SD ++V+
Sbjct: 212 SVCWRQSGVDQCTLVAGGSDGVLQVY 237
>At4g38480.1 68417.m05438 transducin family protein / WD-40 repeat
family protein contains contains Pfam PF00400: WD
domain, G-beta repeat (7 copies, 3 weak);similar to gene
PC326 protein - mouse, PIR2:S37694
Length = 471
Score = 37.9 bits (84), Expect = 0.007
Identities = 27/101 (26%), Positives = 50/101 (49%), Gaps = 2/101 (1%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 183
H V +V+F+ D ++SGS D+ + LW+ D GH + + +F P +
Sbjct: 54 HKGCVNTVSFNADGDILLSGSDDRQVILWDWQTASVKLSFDSGHFNNIFQAKFMPFSDDR 113
Query: 184 IIVSCGWDRTVKVWH-LTNCKLKINHLG-HSGYLNTVTVSP 300
IV+ D+ V+ L + +++ + LG H G ++ + V P
Sbjct: 114 TIVTSAADKQVRYSKILESGQVETSLLGKHQGPVHKLAVEP 154
Score = 35.1 bits (77), Expect = 0.050
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 265 HSGYLNTVTVSPDGSLCASGGKDMKAMLWD 354
H G +NTV+ + DG + SG D + +LWD
Sbjct: 54 HKGCVNTVSFNADGDILLSGSDDRQVILWD 83
>At5g64630.3 68418.m08123 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 428
Score = 37.5 bits (83), Expect = 0.009
Identities = 22/74 (29%), Positives = 37/74 (50%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 183
H KDVL + +S D+ ++SGS D + +W+ + I D H +V V + P
Sbjct: 52 HRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQIL-DAHCHYVQGVAWDP--LAK 108
Query: 184 IIVSCGWDRTVKVW 225
+ S DRT +++
Sbjct: 109 YVASLSSDRTCRIY 122
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +1
Query: 295 SPDGSLCASGGKDMKAMLWDLNDGKHLHTLD-HNDIITALCFSP 423
SPD + SG D ++WD+N G LD H + + + P
Sbjct: 62 SPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDP 105
>At2g16405.1 68415.m01878 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD-repeat protein 13 (SP:Q9H1Z4) [Homo
sapiens]
Length = 482
Score = 37.5 bits (83), Expect = 0.009
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 7/143 (4%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDDGHSDWVSCVRFSPNHAN 180
H+KDV FS +N+ I S S DKTI++W + C I G S C+RF P + N
Sbjct: 215 HSKDVTDFDFSSNNQYIASSSLDKTIRVWELSRGVCIRVIY--GISPQY-CIRFHPVN-N 270
Query: 181 PIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSL--CASGGKDMKAMLWD 354
+ + ++ + V++ + ++ I L + ++ G + C G + ++ D
Sbjct: 271 NFLSAGNANKELTVFNFSTGRI-IKKLLFEDEVTSMDHDHTGQIIFCGDGQGTVYSVSMD 329
Query: 355 LNDG----KHLHTLDHNDIITAL 411
+ G H H +H +T +
Sbjct: 330 SHTGSLSRSHRHRTNHKSPVTTV 352
>At3g27640.1 68416.m03452 transducin family protein / WD-40 repeat
family protein contains seven WD-40 G-protein beta
repeats; similar to RA-regulated nuclear
matrix-associated protein (GI:14161320) {Homo sapiens}
Length = 535
Score = 37.1 bits (82), Expect = 0.012
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 187 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS-LCASGGKDMKAMLWDL 357
+++ D+T+KVW + K +GH+G + ++ P S L SG +D LWDL
Sbjct: 143 LLTASGDQTIKVWDVEENKCTGVLIGHTGTVKSMCSHPTNSDLLVSGSRDGCFALWDL 200
Score = 33.5 bits (73), Expect = 0.15
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Frame = +1
Query: 292 VSPDGSLCASGGKDMKAMLWDLNDGK--HLHTLDHNDIITALCFSPNRYWLCAAFGP--S 459
+SPDG SG D A +W +N + + H+ +TA+ +SP+ A +
Sbjct: 346 ISPDGEYVLSGSSDGNAYIWQVNKPQVDPIILKGHDFEVTAVDWSPSEIGKVATASDDFT 405
Query: 460 IKIWDLES 483
+++W++E+
Sbjct: 406 VRLWNIEN 413
Score = 29.9 bits (64), Expect = 1.9
Identities = 21/80 (26%), Positives = 41/80 (51%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 183
H + +++ + +++ S D+TIK+W+ + E K T GH+ V + P +++
Sbjct: 127 HYNAIFDISWIKGDSCLLTASGDQTIKVWD-VEENKCTGVLIGHTGTVKSMCSHPTNSD- 184
Query: 184 IIVSCGWDRTVKVWHLTNCK 243
++VS D +W L CK
Sbjct: 185 LLVSGSRDGCFALWDL-RCK 203
>At5g15550.2 68418.m01821 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 402
Score = 36.7 bits (81), Expect = 0.017
Identities = 29/128 (22%), Positives = 58/128 (45%), Gaps = 11/128 (8%)
Frame = +1
Query: 13 DVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRF-SPNHANPII 189
D +S R I++G D ++W++ C + ++ GHS +S V + N A +
Sbjct: 111 DWVSAVNGSSPRFILTGCYDGLGRVWSSAGSCSHILE--GHSGAISSVALVNSNDAETVT 168
Query: 190 VS-CGWDRTVKVWHL-------TNCKLKINHL--GHSGYLNTVTVSPDGSLCASGGKDMK 339
V+ DRT++++ + K++ + GH + +V+ G++ S D
Sbjct: 169 VATASKDRTLRLFKFDPAESVDSTTKVRAYKILRGHKASVQSVSAQKSGNMVCSSSWDCT 228
Query: 340 AMLWDLND 363
LW+ N+
Sbjct: 229 INLWNTNE 236
>At5g15550.1 68418.m01820 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 433
Score = 36.7 bits (81), Expect = 0.017
Identities = 29/128 (22%), Positives = 58/128 (45%), Gaps = 11/128 (8%)
Frame = +1
Query: 13 DVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRF-SPNHANPII 189
D +S R I++G D ++W++ C + ++ GHS +S V + N A +
Sbjct: 111 DWVSAVNGSSPRFILTGCYDGLGRVWSSAGSCSHILE--GHSGAISSVALVNSNDAETVT 168
Query: 190 VS-CGWDRTVKVWHL-------TNCKLKINHL--GHSGYLNTVTVSPDGSLCASGGKDMK 339
V+ DRT++++ + K++ + GH + +V+ G++ S D
Sbjct: 169 VATASKDRTLRLFKFDPAESVDSTTKVRAYKILRGHKASVQSVSAQKSGNMVCSSSWDCT 228
Query: 340 AMLWDLND 363
LW+ N+
Sbjct: 229 INLWNTNE 236
>At2g40360.1 68415.m04977 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to block of proliferation protein Bop1
(GI:1679772) [Mus musculus]
Length = 753
Score = 36.7 bits (81), Expect = 0.017
Identities = 23/114 (20%), Positives = 49/114 (42%), Gaps = 3/114 (2%)
Frame = +1
Query: 250 INHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCFSP-N 426
+ + GH+G + +++ G ASG D +W++ G+ L ++ I + ++P +
Sbjct: 417 LEYKGHTGAVTSISTDSSGEWIASGSTDGSVRMWEVETGRCLKVWQFDEAIMCVAWNPLS 476
Query: 427 RY-WLCAAFGPSIKIWDLE-SKEMVEELRPEIINQTQTSKTDPPQCLSLAWSTD 582
R L A G + + E + +E+ E ++ + D + W D
Sbjct: 477 RLPVLAVAMGRDLFFLNTELGTDEEQEITKERLHSGNIPEPDASVAAIVTWLPD 530
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT-LAECKYTIQDDGHSDWVSCVRFSPNHAN 180
HT V S++ I SGS D ++++W C Q D + + CV ++P
Sbjct: 422 HTGAVTSISTDSSGEWIASGSTDGSVRMWEVETGRCLKVWQFD---EAIMCVAWNPLSRL 478
Query: 181 PII-VSCGWD 207
P++ V+ G D
Sbjct: 479 PVLAVAMGRD 488
>At3g42660.1 68416.m04436 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400); AND-1
protein - Homo sapiens, EMBL:AJ006266
Length = 951
Score = 36.3 bits (80), Expect = 0.022
Identities = 30/127 (23%), Positives = 55/127 (43%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 183
H V S+A S D+ + SGS D +KL+ ++ + + + F N +
Sbjct: 61 HQDGVTSLALSNDSTLLASGSIDHCVKLYK-FPSGEFQTNITRFTLPIRVLAF--NGSGS 117
Query: 184 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 363
++ + G D +K+ + + + GH G + + P+G L AS + W+L +
Sbjct: 118 LLAAAGDDEGIKLINTFDGSIVRVLKGHKGPVTGLDFHPNGELLASIDTTGTVLCWELQN 177
Query: 364 GKHLHTL 384
G TL
Sbjct: 178 GVVSFTL 184
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/61 (27%), Positives = 31/61 (50%)
Frame = +1
Query: 244 LKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCFSP 423
L+ +HL YL T +P+G A+ G D + +LWD++ + + + I + + P
Sbjct: 233 LRGDHLEAICYL---TWAPNGKYIATSGLDKQVLLWDVDKKQDIDRHKFEERICCMSWKP 289
Query: 424 N 426
N
Sbjct: 290 N 290
>At2g30050.1 68415.m03654 transducin family protein / WD-40 repeat
family protein similar to SEC13-related protein
(SP:P55735) [Homo sapiens]
Length = 302
Score = 36.3 bits (80), Expect = 0.022
Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 24/141 (17%)
Frame = +1
Query: 1 DHTKDVLSVAFSVDN--RQIVSGSRDKTIKLWNTLAECKYTIQ--DDGHSDWVSCVRFSP 168
DH V S+A++ + + GS D I ++ A+ + D H V+ V ++P
Sbjct: 101 DHKSSVNSIAWAPHDIGLSLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAP 160
Query: 169 NHA----------NPI--IVSCGWDRTVKVWHLTNCKLKINHL----GHSGYLNTVTVSP 300
A +P+ + S G D TVKVW L N K++ H+ ++ V +P
Sbjct: 161 ATAPGALVSSGLLDPVYKLASGGCDNTVKVWKLANGSWKMDCFPALQKHTDWVRDVAWAP 220
Query: 301 D----GSLCASGGKDMKAMLW 351
+ S ASG +D K ++W
Sbjct: 221 NLGLPKSTIASGSQDGKVIIW 241
Score = 32.7 bits (71), Expect = 0.27
Identities = 43/190 (22%), Positives = 79/190 (41%), Gaps = 18/190 (9%)
Frame = +1
Query: 124 DDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTN---CKLKINHLGHSGYLNTVT- 291
+ GH D V V+ ++ I + D T+K+ ++N + GH G + V
Sbjct: 7 ETGHEDIVHDVQM--DYYGKRIATASSDCTIKITGVSNNGGSQQLATLTGHRGPVWEVAW 64
Query: 292 VSPD-GSLCASGGKDMKAMLW---DLNDGKHLHTL-DHNDIITALCFSPNRYWLCAAFGP 456
P GS+ AS D + +LW + N H DH + ++ ++P+ L A G
Sbjct: 65 AHPKYGSILASCSYDGQVILWKEGNQNQWTQDHVFTDHKSSVNSIAWAPHDIGLSLACGS 124
Query: 457 S---IKIWDLESK-----EMVEELRPEIINQTQTSKTDPPQCLSLAWSTDG-QTLFAGYS 609
S I ++ + +++ P + + P L + D L +G
Sbjct: 125 SDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPATAPGALVSSGLLDPVYKLASGGC 184
Query: 610 DNTIRVWQVS 639
DNT++VW+++
Sbjct: 185 DNTVKVWKLA 194
>At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2
WD-40 repeats (PF0400);similar to guanine
nucleotide-binding protein beta subunit GPBA (SP:P36408)
[Dictyostelium discoideum (Slime mold)]; similar to
katanin p80 (WD40-containing) subunit B 1 (GI:12655011)
[Homo sapiens]
Length = 418
Score = 36.3 bits (80), Expect = 0.022
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +1
Query: 277 LNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL-DHNDIITALCFSPNRYWLCAA-F 450
+N +VSPDG L A G + ++ D + GK + +L H D A + PN L
Sbjct: 251 VNNTSVSPDGKLLAVVGDSTECLISDSHSGKVISSLRGHKDYSFASAWHPNGLILATGNQ 310
Query: 451 GPSIKIWDLES 483
+ ++WD+ +
Sbjct: 311 DTACRLWDIRN 321
Score = 32.7 bits (71), Expect = 0.27
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Frame = +1
Query: 262 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL-NDGKHLHTLDHN-DIITALCFSP-NRY 432
GH Y P+G + A+G +D LWD+ N + L N I L F+P R+
Sbjct: 288 GHKDYSFASAWHPNGLILATGNQDTACRLWDIRNPSESFAVLKGNMGAIRGLKFTPEGRF 347
Query: 433 WLCAAFGPSIKIWDLES 483
A + I+D +S
Sbjct: 348 LAMAEPADFVHIFDTQS 364
>At1g15850.1 68414.m01902 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
mRNA-associated protein mrnp 41 (SP:P78406) [Homo
sapiens]; similar to mitotic checkpoint protein
GI:9294423 from [Arabidopsis thaliana]
Length = 140
Score = 36.3 bits (80), Expect = 0.022
Identities = 25/92 (27%), Positives = 40/92 (43%), Gaps = 5/92 (5%)
Frame = +1
Query: 136 SDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINH-----LGHSGYLNTVTVSP 300
+D +S + FSP I+V+ WD V+ W +T I + H +
Sbjct: 26 TDSISSLSFSPKA--DILVATSWDCQVRCWEITRSDGSIASEPKVSMSHDQPVLCSAWKD 83
Query: 301 DGSLCASGGKDMKAMLWDLNDGKHLHTLDHND 396
DG+ +GG D +A +W L G T+ +D
Sbjct: 84 DGTTVFTGGCDKQAKMWPLLSGAQPSTVAMHD 115
Score = 35.1 bits (77), Expect = 0.050
Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Frame = +1
Query: 394 DIITALCFSPNRYWLCA-AFGPSIKIWDLESKEMVEELRPEIINQTQTSKTDPPQCLSLA 570
D I++L FSP L A ++ ++ W++ + I ++ + S + L A
Sbjct: 27 DSISSLSFSPKADILVATSWDCQVRCWEITRSD------GSIASEPKVSMSHDQPVLCSA 80
Query: 571 WSTDGQTLFAGYSDNTIRVWQVSISAR 651
W DG T+F G D ++W + A+
Sbjct: 81 WKDDGTTVFTGGCDKQAKMWPLLSGAQ 107
>At3g20740.1 68416.m02624 fertilization-independent endosperm
protein (FIE) contains 6 WD-40 repeats (PF00400);
identical to fertilization-independent endosperm protein
(GI:4567095) [Arabidopsis thaliana]
Length = 369
Score = 35.9 bits (79), Expect = 0.029
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +1
Query: 52 IVSGSRDKTIKLWNTLAECKYTI--QDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 225
+++ S+D++++LWN I GH V V F P+ SCG D T+K+W
Sbjct: 144 VITASKDESVRLWNVETGICILIFAGAGGHRYEVLSVDFHPSDIYRF-ASCGMDTTIKIW 202
Query: 226 HL 231
+
Sbjct: 203 SM 204
>At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies, 1
significant); similar to Trp-Asp repeat protein
(PIR:T40094) [Schizosaccharomyces]
Length = 447
Score = 35.9 bits (79), Expect = 0.029
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Frame = +1
Query: 250 INHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD-HNDIITALCFSPN 426
+ H +N ++SPDG L A G + + ++ D N GK L TL H D A + P+
Sbjct: 271 VKHFRFPWPVNHASLSPDGKLLAIVGDNPEGLIVDPNTGKTLETLSGHLDFSFASAWHPD 330
Query: 427 RYWLCAA-FGPSIKIWDLES 483
+ ++WD+ +
Sbjct: 331 GVTFSTGNQDKTCRVWDIRN 350
Score = 29.5 bits (63), Expect = 2.5
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +1
Query: 568 AWSTDGQTLFAGYSDNTIRVWQV 636
AW DG T G D T RVW +
Sbjct: 326 AWHPDGVTFSTGNQDKTCRVWDI 348
>At4g34380.1 68417.m04884 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Myosin heavy chain kinase B (MHCK
B).(SP:P90648) [Dictyostelium discoideum]
Length = 495
Score = 35.5 bits (78), Expect = 0.038
Identities = 41/175 (23%), Positives = 70/175 (40%), Gaps = 8/175 (4%)
Frame = +1
Query: 133 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSL 312
H+D VS + ++ S WD T+KVW + + K + H +N+V +S L
Sbjct: 234 HNDAVSSLSLDVELG--LLYSSSWDTTIKVWRIADSKCLESIHAHDDAINSV-MSGFDDL 290
Query: 313 CASGGKDMKAMLW--DLNDGKHLHT-----LDHNDIITALCF-SPNRYWLCAAFGPSIKI 468
+G D +W +L HT L + +TAL S + C + +
Sbjct: 291 VFTGSADGTVKVWKRELQGKGTKHTLAQVLLKQENAVTALAVKSQSSIVYCGSSDGLVNY 350
Query: 469 WDLESKEMVEELRPEIINQTQTSKTDPPQCLSLAWSTDGQTLFAGYSDNTIRVWQ 633
W+ + I+ +++ CL +A G L +G +D I VW+
Sbjct: 351 WERSKRSFT----GGILKGHKSAVL----CLGIA----GNLLLSGSADKNICVWR 393
Score = 32.7 bits (71), Expect = 0.27
Identities = 22/74 (29%), Positives = 36/74 (48%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 183
H V S++ V+ + S S D TIK+W +A+ K H D ++ V + +
Sbjct: 234 HNDAVSSLSLDVELGLLYSSSWDTTIKVWR-IADSKCLESIHAHDDAINSVM---SGFDD 289
Query: 184 IIVSCGWDRTVKVW 225
++ + D TVKVW
Sbjct: 290 LVFTGSADGTVKVW 303
>At3g06880.1 68416.m00817 transducin family protein / WD-40 repeat
family protein similar to PAK/PLC-interacting protein 1
(GI:4211689) {Homo sapiens}
Length = 1115
Score = 35.5 bits (78), Expect = 0.038
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +1
Query: 52 IVSGSRDKTIKLWNTLAECKYTIQD-DGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWH 228
+ SG D +I++WN + + D H V+C FS + ++S D+T++VW
Sbjct: 866 LFSGFSDGSIRVWNVNKKIATLLWDIKEHKSTVTC--FSLSETGECVLSGSADKTIRVWQ 923
Query: 229 LTNCKLK 249
+ KL+
Sbjct: 924 IVKGKLE 930
Score = 35.1 bits (77), Expect = 0.050
Identities = 27/97 (27%), Positives = 48/97 (49%)
Frame = +1
Query: 346 LWDLNDGKHLHTLDHNDIITALCFSPNRYWLCAAFGPSIKIWDLESKEMVEELRPEIINQ 525
+++ + GK +H + +TAL + + + G SI++W++ K + L +I
Sbjct: 839 IYNFSSGKEMHQ-SGSGAVTALIYHKGLLFSGFSDG-SIRVWNVNKK--IATLLWDIKEH 894
Query: 526 TQTSKTDPPQCLSLAWSTDGQTLFAGYSDNTIRVWQV 636
T C SL S G+ + +G +D TIRVWQ+
Sbjct: 895 KSTVT-----CFSL--SETGECVLSGSADKTIRVWQI 924
Score = 28.3 bits (60), Expect = 5.8
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = +1
Query: 592 LFAGYSDNTIRVWQVS 639
LF+G+SD +IRVW V+
Sbjct: 866 LFSGFSDGSIRVWNVN 881
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +1
Query: 1 DHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 90
+H V + S ++SGS DKTI++W
Sbjct: 893 EHKSTVTCFSLSETGECVLSGSADKTIRVW 922
>At1g65030.1 68414.m07371 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to PAK/PLC-interacting protein 1 (GI:14211689)
[Homo sapiens]
Length = 345
Score = 35.5 bits (78), Expect = 0.038
Identities = 30/83 (36%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Frame = +1
Query: 289 TVSPDGSLCASGGKDMKAMLWDLNDGKHLHT-LDHNDI--ITALCF-SPN-----RYWLC 441
TV+ G ASGG D L+DL L + LDHN ITAL F +P+ R +
Sbjct: 46 TVACSGPAAASGGSDDTIHLYDLPSASSLGSLLDHNHAASITALSFYTPSSLSFPRNLIS 105
Query: 442 AAFGPSIKIWDLESKEMVEELRP 510
AA S+ I+D + +++ RP
Sbjct: 106 AAADGSVAIFDTDPFVLLKSFRP 128
>At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 (1
significant) WD-40 repeats (PF0400); similar to Trp-Asp
repeat protein (PIR:T40094) [Schizosaccharomyces]
Length = 445
Score = 35.5 bits (78), Expect = 0.038
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +1
Query: 277 LNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD-HNDIITALCFSPNRYWLCAA-F 450
+N ++SPDG L G + +++L D N GK L TL H D A + P+ +
Sbjct: 278 VNHTSLSPDGKLLTIVGDNPESLLVDPNTGKTLATLSGHLDFSFASAWHPDGFTFSTGNQ 337
Query: 451 GPSIKIWDLES 483
+ ++WD+ +
Sbjct: 338 DKTCRVWDIRN 348
Score = 29.1 bits (62), Expect = 3.3
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +1
Query: 568 AWSTDGQTLFAGYSDNTIRVWQV 636
AW DG T G D T RVW +
Sbjct: 324 AWHPDGFTFSTGNQDKTCRVWDI 346
>At5g05970.1 68418.m00661 transducin family protein / WD-40 repeat
family protein contains similarity to regulatory protein
Nedd1; contains Pfam PF00400: WD domain, G-beta repeat
(6 copies, 2 weak)|19804256|gb|AV785466.1|AV785466
Length = 781
Score = 35.1 bits (77), Expect = 0.050
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 11/88 (12%)
Frame = +1
Query: 277 LNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL-----DHND----IITALCFSP-- 423
+N+V + + AS G+D K LW N G+ L T+ D D ++A+ FS
Sbjct: 46 VNSVKWNHTNLVVASTGEDKKISLWRKN-GQSLGTVPVTGKDGGDSAEECLSAISFSKKG 104
Query: 424 NRYWLCAAFGPSIKIWDLESKEMVEELR 507
+RY G +KIWDL+ K +++L+
Sbjct: 105 SRYICSGGTGQIVKIWDLQRKLCIKKLK 132
Score = 32.7 bits (71), Expect = 0.27
Identities = 29/123 (23%), Positives = 50/123 (40%), Gaps = 10/123 (8%)
Frame = +1
Query: 169 NHANPIIVSCGWDRTVKVWHLTNCKL-KINHLGHSG------YLNTVTVSPDGS-LCASG 324
NH N ++ S G D+ + +W L + G G L+ ++ S GS SG
Sbjct: 52 NHTNLVVASTGEDKKISLWRKNGQSLGTVPVTGKDGGDSAEECLSAISFSKKGSRYICSG 111
Query: 325 GKDMKAMLWDLNDGKHLHTL-DHNDIITALCFS-PNRYWLCAAFGPSIKIWDLESKEMVE 498
G +WDL + L H IT + ++ + + + G + + +L S
Sbjct: 112 GTGQIVKIWDLQRKLCIKKLKGHTSTITGVMYNCKDEHLASVSVGGDLIVHNLASGARAT 171
Query: 499 ELR 507
EL+
Sbjct: 172 ELK 174
Score = 31.9 bits (69), Expect = 0.47
Identities = 41/168 (24%), Positives = 71/168 (42%), Gaps = 7/168 (4%)
Frame = +1
Query: 1 DHTKDVLS-VAFSVD-NRQIVSGSRDKTIKLWNTLAECKYTIQD-DGHSDWVSCVRFSPN 171
D ++ LS ++FS +R I SG + +K+W+ + K I+ GH+ ++ V ++
Sbjct: 89 DSAEECLSAISFSKKGSRYICSGGTGQIVKIWDL--QRKLCIKKLKGHTSTITGVMYNCK 146
Query: 172 HANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGY-LNTVTVSPDGS-LCASGGKDMKAM 345
+ VS G D V +L + +G L + S L + G D
Sbjct: 147 DEHLASVSVGGDLIVH--NLASGARATELKDPNGQVLRLLDYSRSSRHLLVTAGDDGTVH 204
Query: 346 LWDLN--DGKHLHTLDHNDIITALCFSPNRYWLCAAFGPSIKIWDLES 483
LWD K H+ +CFSP+ + A+ G K++ +S
Sbjct: 205 LWDTTGRSPKMSWLKQHSAPTAGVCFSPSNEKIIASVGMDKKLYTYDS 252
>At1g21650.1 68414.m02710 preprotein translocase secA family protein
contains Pfam profiles: PF01043 SecA protein, amino
terminal region, PF00400 WD domain, G-beta repeat,
PF00097 zinc finger, C3HC4 type (RING finger)
Length = 1579
Score = 35.1 bits (77), Expect = 0.050
Identities = 21/65 (32%), Positives = 32/65 (49%)
Frame = +1
Query: 52 IVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHL 231
+ +GS D TIK W+ L + GH VS + N ++ S WD TV++W L
Sbjct: 600 VYTGSGDNTIKAWS-LQDGSLLCTMSGHKSVVSTLVV----VNGVLYSGSWDGTVRLWSL 654
Query: 232 TNCKL 246
++ L
Sbjct: 655 SDNSL 659
Score = 33.1 bits (72), Expect = 0.20
Identities = 19/60 (31%), Positives = 26/60 (43%)
Frame = +1
Query: 205 DRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL 384
D T+K W L + L GH ++T+ V + SG D LW L+D L L
Sbjct: 606 DNTIKAWSLQDGSLLCTMSGHKSVVSTLVVV--NGVLYSGSWDGTVRLWSLSDNSLLTVL 663
Score = 31.9 bits (69), Expect = 0.47
Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 7/110 (6%)
Frame = +1
Query: 319 SGGKDMKAMLWDLNDGKHLHTLDHNDIITALCFSPNRYWLCAAFGPSIKIWDLESKEMVE 498
SG +KA W L DG L T+ + + + N ++ ++++W L ++
Sbjct: 604 SGDNTIKA--WSLQDGSLLCTMSGHKSVVSTLVVVNGVLYSGSWDGTVRLWSLSDNSLLT 661
Query: 499 ---ELRPEIINQTQT----SKTDPPQCLSLAWSTDGQTLFAGYSDNTIRV 627
E P II + T K LS+A +G+ LF G D TI V
Sbjct: 662 VLGEETPGIIWRDDTLMKSMKIQNGAILSIA--VNGKWLFTGGWDKTINV 709
>At5g45760.2 68418.m05626 transducin family protein / WD-40 repeat
family protein
Length = 334
Score = 34.7 bits (76), Expect = 0.067
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +1
Query: 130 GHSDWVSCVRFSP-NHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLN 282
GH+ VSCV FS ++S G D+TVK+W C N+ +S L+
Sbjct: 246 GHNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWDCFKCLDPNNNNNNSDLLH 297
Score = 31.1 bits (67), Expect = 0.82
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = +1
Query: 4 HTKDVLSVAFSV---DNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSD 141
H V VAFS+ R ++SG DKT+K+W+ +C ++ +SD
Sbjct: 247 HNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWDCF-KCLDPNNNNNNSD 294
>At5g45760.1 68418.m05625 transducin family protein / WD-40 repeat
family protein
Length = 360
Score = 34.7 bits (76), Expect = 0.067
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +1
Query: 130 GHSDWVSCVRFSP-NHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLN 282
GH+ VSCV FS ++S G D+TVK+W C N+ +S L+
Sbjct: 272 GHNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWDCFKCLDPNNNNNNSDLLH 323
Score = 31.9 bits (69), Expect = 0.47
Identities = 31/131 (23%), Positives = 53/131 (40%), Gaps = 4/131 (3%)
Frame = +1
Query: 7 TKDVLSVAFSVDNRQIVSGSRDKTIKLWN--TLAECKYTIQDDGHSDWVSCVRFSPNHAN 180
T+ V S+ F N I+ S IK ++ TL+ + + + + + N +
Sbjct: 58 TEPVSSLCFKTGNENILYASCGNEIKSFDVHTLSATSWKPLESYNYNKDEVNQVVCNGRS 117
Query: 181 PIIVSCGWDRTVKVWHL-TNCKLKINHLGHSGYLNTVTVSPDGSL-CASGGKDMKAMLWD 354
+ S VK+ L C K GH+ ++V P +GG D K +LWD
Sbjct: 118 SFLASADDSGDVKIIDLGQKCLYKTLRAGHTSICSSVQFIPWRPWEVITGGLDSKLVLWD 177
Query: 355 LNDGKHLHTLD 387
+ G+ +D
Sbjct: 178 FSKGRSQKIID 188
Score = 31.1 bits (67), Expect = 0.82
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = +1
Query: 4 HTKDVLSVAFSV---DNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSD 141
H V VAFS+ R ++SG DKT+K+W+ +C ++ +SD
Sbjct: 273 HNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWDCF-KCLDPNNNNNNSD 320
>At5g50650.1 68418.m06276 WD-40 repeat family protein / St12p
protein, putative contains 4 WD-40 repeats (PF0400);
similar to St12p protein GI:166878 [Arabidopsis
thaliana]
Length = 383
Score = 34.3 bits (75), Expect = 0.088
Identities = 22/80 (27%), Positives = 39/80 (48%)
Frame = +1
Query: 394 DIITALCFSPNRYWLCAAFGPSIKIWDLESKEMVEELRPEIINQTQTSKTDPPQCLSLAW 573
D+ + P + L A S +++D E+ ++E+ E + D Q LSL++
Sbjct: 93 DLPYRMAIHPRQGGLICALPNSCRLFDWEN--IIEDDNEEESEKVVKELKDVGQQLSLSF 150
Query: 574 STDGQTLFAGYSDNTIRVWQ 633
+ DG L G D T+RV++
Sbjct: 151 NQDGTVLATGAEDGTLRVFE 170
>At5g50550.1 68418.m06260 WD-40 repeat family protein / St12p
protein, putative contains 4 WD-40 repeats (PF0400);
similar to St12p protein GI:166878 [Arabidopsis
thaliana]
Length = 383
Score = 34.3 bits (75), Expect = 0.088
Identities = 22/80 (27%), Positives = 39/80 (48%)
Frame = +1
Query: 394 DIITALCFSPNRYWLCAAFGPSIKIWDLESKEMVEELRPEIINQTQTSKTDPPQCLSLAW 573
D+ + P + L A S +++D E+ ++E+ E + D Q LSL++
Sbjct: 93 DLPYRMAIHPRQGGLICALPNSCRLFDWEN--IIEDDNEEESEKVVKELKDVGQQLSLSF 150
Query: 574 STDGQTLFAGYSDNTIRVWQ 633
+ DG L G D T+RV++
Sbjct: 151 NQDGTVLATGAEDGTLRVFE 170
>At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis};
Length = 466
Score = 34.3 bits (75), Expect = 0.088
Identities = 50/222 (22%), Positives = 90/222 (40%), Gaps = 16/222 (7%)
Frame = +1
Query: 16 VLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVS 195
V S+ ++ D + G + ++LW+ ++ + GH V + ++ NH I+ +
Sbjct: 168 VTSINWTQDGLDLAVGLDNSEVQLWDFVSNRQVRTLIGGHESRVGSLAWN-NH---ILTT 223
Query: 196 CGWDRTVKVWHLTNCKLKI--NHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND-- 363
G D + V + + I +LGH+ + + S G ASGG +WD
Sbjct: 224 GGMDGKI-VNNDVRIRSSIVGTYLGHTEEVCGLKWSESGKKLASGGNYNVVHIWDHRSVA 282
Query: 364 -----GKHLHTL-DHNDIITALCFSPNRYWLCAAFG----PSIKIWDLESKEMVEELRPE 513
+ LH +H + AL + P + L A G IK W+ +
Sbjct: 283 SSKPTRQWLHRFEEHTAAVRALAWCPFQATLLATGGGVGDGKIKFWNTHT--------GA 334
Query: 514 IINQTQTSKTDPPQCLSLAWSTDGQTLFA--GYSDNTIRVWQ 633
+N +T Q SL WS + L + G++ N + +W+
Sbjct: 335 CLNSVETGS----QVCSLLWSQRERELLSSHGFTQNQLTLWK 372
Score = 30.7 bits (66), Expect = 1.1
Identities = 35/169 (20%), Positives = 75/169 (44%), Gaps = 11/169 (6%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN--TLAECKYTIQ----DDGHSDWVSCVRFS 165
HT++V + +S +++ SG + +W+ ++A K T Q + H+ V + +
Sbjct: 248 HTEEVCGLKWSESGKKLASGGNYNVVHIWDHRSVASSKPTRQWLHRFEEHTAAVRALAWC 307
Query: 166 PNHANPIIVSCG-WDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMK 339
P A + G D +K W+ T+ +N + + ++ S + L +S G
Sbjct: 308 PFQATLLATGGGVGDGKIKFWN-THTGACLNSVETGSQVCSLLWSQRERELLSSHGFTQN 366
Query: 340 AM-LWDLNDGKHLHTLD-HNDIITALCFSPNRYWLCAAFG-PSIKIWDL 477
+ LW + L+ H + + SPN + +A G ++++W++
Sbjct: 367 QLTLWKYPSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLWNV 415
Score = 28.7 bits (61), Expect = 4.4
Identities = 29/122 (23%), Positives = 53/122 (43%), Gaps = 2/122 (1%)
Frame = +1
Query: 271 GYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL--DHNDIITALCFSPNRYWLCA 444
G + ++ + DG A G + + LWD + + TL H + +L + N + L
Sbjct: 166 GPVTSINWTQDGLDLAVGLDNSEVQLWDFVSNRQVRTLIGGHESRVGSLAW--NNHILTT 223
Query: 445 AFGPSIKIWDLESKEMVEELRPEIINQTQTSKTDPPQCLSLAWSTDGQTLFAGYSDNTIR 624
G KI + + + +R I+ T T+ + L WS G+ L +G + N +
Sbjct: 224 G-GMDGKIVNNDVR-----IRSSIVG-TYLGHTE--EVCGLKWSESGKKLASGGNYNVVH 274
Query: 625 VW 630
+W
Sbjct: 275 IW 276
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE 105
HT VL +A S + + S + D+ ++LWN E
Sbjct: 385 HTSRVLFMAQSPNGCTVASAAGDENLRLWNVFGE 418
>At4g21520.1 68417.m03110 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to guanine nucleotide-binding protein beta 5
(GI:1001939) [Mesocricetus auratus]
Length = 425
Score = 34.3 bits (75), Expect = 0.088
Identities = 32/126 (25%), Positives = 56/126 (44%), Gaps = 7/126 (5%)
Frame = +1
Query: 1 DHTKDVLSVAFSVDNRQIVSG--SRDKTIKLWNTLAECKY--TIQD--DGHSDWVSCVRF 162
D SV F+ D +I +G S + L + + T+Q +G + +S + F
Sbjct: 161 DEITAAFSVGFNPDGTKIFAGYNSSIRVFDLHRPGRDFRQYSTLQKNKEGQAGILSTLAF 220
Query: 163 SPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGG-KDMK 339
SP ++ + V + +T ++ N +L G G + V S DG+ +GG KD
Sbjct: 221 SPTNSGMLAVG-SYGQTTGIYREDNMELLYVLHGQEGGVTHVQFSKDGNYLYTGGRKDPY 279
Query: 340 AMLWDL 357
+ WD+
Sbjct: 280 ILCWDI 285
>At2g20330.1 68415.m02374 transducin family protein / WD-40 repeat
family protein similar to Transcriptional repressor
rco-1 (SP:P78706) [Neurospora crassa]; similar to
TUP1(GB:AF079369); contains 6 WD-40 repeats (PF00400)
Length = 648
Score = 33.9 bits (74), Expect = 0.12
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 93
HT D+ SV FS D R ++S S D ++K+W+
Sbjct: 372 HTDDITSVKFSSDGRILLSRSFDGSLKVWD 401
Score = 31.5 bits (68), Expect = 0.62
Identities = 14/61 (22%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +1
Query: 457 SIKIWDLES-KEMVEELRPEIINQTQTSKTDPPQCLSLAWSTDGQTLFAGYSDNTIRVWQ 633
S++IWD+ + + ++P++ + T + AW DG+ + G D +I++W
Sbjct: 302 SLRIWDVNNFLSQTQVIKPKLARPGRVPVT------TCAWDRDGKRIAGGVGDGSIQIWS 355
Query: 634 V 636
+
Sbjct: 356 L 356
>At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 447
Score = 33.5 bits (73), Expect = 0.15
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +1
Query: 277 LNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL-DHNDIITALCFSPNRYWLCAA-F 450
+N ++SPDG L A G D +L D ++G+ + TL H D A + PN
Sbjct: 280 VNHSSLSPDGKLVAVVGDDPDGLLVDTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQ 339
Query: 451 GPSIKIWD 474
+ +IWD
Sbjct: 340 DKTCRIWD 347
>At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 441
Score = 33.5 bits (73), Expect = 0.15
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +1
Query: 277 LNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL-DHNDIITALCFSPNRYWLCAA-F 450
+N ++SPDG L A G D +L D ++G+ + TL H D A + PN
Sbjct: 274 VNHSSLSPDGKLVAVVGDDPDGLLVDTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQ 333
Query: 451 GPSIKIWD 474
+ +IWD
Sbjct: 334 DKTCRIWD 341
>At3g01340.1 68416.m00051 protein transport protein SEC13 family
protein / WD-40 repeat family protein similar to Protein
transport protein SEC13 SP|Q04491 {Saccharomyces
cerevisiae} and SEC13 (SP:P53024) [Pichia pastoris]
Length = 302
Score = 33.5 bits (73), Expect = 0.15
Identities = 45/191 (23%), Positives = 81/191 (42%), Gaps = 19/191 (9%)
Frame = +1
Query: 124 DDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHL----GHSGYLNTVT 291
+ GHSD + V ++ + + D T+K+ ++N HL GH G + V
Sbjct: 7 ETGHSDTIHDVVM--DYYGKRVATASSDCTIKITGVSNSGGS-QHLATLTGHRGPVWQVA 63
Query: 292 -VSPD-GSLCASGGKDMKAMLW---DLNDGKHLHTL-DHNDIITALCFSPNRYWLCAAFG 453
P GSL AS D + +LW + N H DH + ++ ++P+ L A G
Sbjct: 64 WAHPKFGSLLASCSYDGQIILWKEGNQNQWTQAHVFTDHKVSVNSIAWAPHELGLSLACG 123
Query: 454 PS---IKIWDLESK-----EMVEELRPE-IINQTQTSKTDPPQCLSLAWSTDGQTLFAGY 606
S I ++ + +++ P + + + T+P +S L +G
Sbjct: 124 ASDGNISVFSARADGGWDTTKIDQAHPVGVTSVSWAPATEPGALVSSGMIDPVYKLASGG 183
Query: 607 SDNTIRVWQVS 639
D+T++VW+ S
Sbjct: 184 CDSTVKVWKFS 194
Score = 32.3 bits (70), Expect = 0.36
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 24/143 (16%)
Frame = +1
Query: 1 DHTKDVLSVAFSVDNR--QIVSGSRDKTIKLWNTLAECKY--TIQDDGHSDWVSCVRFSP 168
DH V S+A++ + G+ D I +++ A+ + T D H V+ V ++P
Sbjct: 101 DHKVSVNSIAWAPHELGLSLACGASDGNISVFSARADGGWDTTKIDQAHPVGVTSVSWAP 160
Query: 169 ----------NHANPI--IVSCGWDRTVKVWHLTNCKLKINHL----GHSGYLNTVTVSP 300
+P+ + S G D TVKVW +N K++ H+ ++ V +P
Sbjct: 161 ATEPGALVSSGMIDPVYKLASGGCDSTVKVWKFSNGSWKMDCFPALNKHTDWVRDVAWAP 220
Query: 301 D----GSLCASGGKDMKAMLWDL 357
+ S ASG +D K ++W +
Sbjct: 221 NLGLPKSTIASGSEDGKVIIWTI 243
>At3g52190.1 68416.m05731 transducin family protein / WD-40 repeat
family protein similar to St12p protein (GI:166878)
{Arabidopsis thaliana}; contains Pfam profile: PF00400
WD domain, G-beta repeat
Length = 398
Score = 33.1 bits (72), Expect = 0.20
Identities = 27/112 (24%), Positives = 47/112 (41%), Gaps = 4/112 (3%)
Frame = +1
Query: 10 KDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPII 189
K + + FS+D+ + + S D + ++W + + + + RFS + P +
Sbjct: 165 KSIRDMDFSLDSEFLATTSTDGSARIWKAEDGFPLSTLERSGDENIELCRFSKDGTKPFL 224
Query: 190 VSC---GWDRTVKVWHLTNCK-LKINHLGHSGYLNTVTVSPDGSLCASGGKD 333
G V V+ ++ K L L +T+ VS DG A GGKD
Sbjct: 225 FCAAQRGDTPMVNVYDISTWKKLGFKKLSRKT-ASTMAVSLDGKYIALGGKD 275
>At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-related
contains Pfam PF02138: Beige/BEACH domain; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies)
Length = 2946
Score = 33.1 bits (72), Expect = 0.20
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLW 90
H V +A S DN +V+GSRD T+ LW
Sbjct: 2667 HCAPVTCLALSPDNNFLVTGSRDSTVLLW 2695
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/52 (23%), Positives = 24/52 (46%)
Frame = +1
Query: 205 DRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLN 360
D ++K+ K GH + + +SPD + +G +D +LW ++
Sbjct: 2647 DNSIKLVSSDGAKTLETAFGHCAPVTCLALSPDNNFLVTGSRDSTVLLWRIH 2698
>At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-related
similar to BEIGE (GI:3928547) [Rattus norvegicus];
Similar to gb|U70015 lysosomal trafficking regulator from
Mus musculus and contains 2 Pfam PF00400 WD-40, G-beta
repeats. ESTs gb|T43386 and gb|AA395236 come from this
gene
Length = 3601
Score = 33.1 bits (72), Expect = 0.20
Identities = 42/212 (19%), Positives = 84/212 (39%), Gaps = 15/212 (7%)
Frame = +1
Query: 46 RQIVSGSRDKTIKLWNTLAECKYTIQDDGH-SDWVSCVRFSPNHANPIIVSCGWDRTVKV 222
+ I G D++++ + + + ++ H S+ + C S H I+V+ D V V
Sbjct: 3299 KYITWGFPDRSLRFMSYDQDKLLSTHENLHESNQIQCAGVS--HDGRIVVTGAEDGLVCV 3356
Query: 223 WHLTN--------CKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLH 378
W ++ +L+ H+ + + VS + ASG D ++WDL+ +
Sbjct: 3357 WRVSKDGPRGSRRLRLEKALCAHTAKVTCLRVSQPYMMIASGSDDCTVIIWDLSSLSFVR 3416
Query: 379 TL-DHNDIITALCFSPNRYWLCAAFGPSIKIWDLESKEMVEELRPEIINQTQTSKTDPPQ 555
L D I+A+ + + A G + +W + + + TS+
Sbjct: 3417 QLPDFPVPISAIYINDLTGEIVTAAGTVLAVWSING---------DCLAVANTSQLPSDS 3467
Query: 556 CLSLAWSTDGQTL-----FAGYSDNTIRVWQV 636
LS+ ST L G+ ++VW++
Sbjct: 3468 VLSVTGSTSSDWLETSWYVTGHQSGAVKVWRM 3499
>At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3
protein (ZFWD3) contains 5 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd3 protein (GP:12057168)
{Arabidopsis thaliana}
Length = 472
Score = 32.7 bits (71), Expect = 0.27
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Frame = +1
Query: 31 FSVDNRQIVSGSRDKTIKLW--NTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGW 204
F V + SGS DKTIK+W NTL +C+ T++ H V+ + + ++S
Sbjct: 318 FVVGGEVLYSGSVDKTIKVWDLNTL-QCRMTLKQ--HIGTVTSLLC----WDKCLISSSL 370
Query: 205 DRTVKVWHLT-NCKLKI 252
D T+K+W + N LK+
Sbjct: 371 DGTIKLWACSENESLKV 387
Score = 29.9 bits (64), Expect = 1.9
Identities = 51/216 (23%), Positives = 85/216 (39%), Gaps = 12/216 (5%)
Frame = +1
Query: 28 AFSVDNRQIVSGSRDKTIKLWN-TLAEC---KYTIQDDGH-SDWVSCVRFSPNHANPIIV 192
A + N + +G+ +I +W T +E KY +GH S V+C ++
Sbjct: 271 AMTAANGMLFAGTSSGSILVWKATDSESDPFKYLTSLEGHHSGEVTCFVVG----GEVLY 326
Query: 193 SCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKH 372
S D+T+KVW L + ++ H G + ++ + D L +S D LW ++ +
Sbjct: 327 SGSVDKTIKVWDLNTLQCRMTLKQHIGTVTSL-LCWDKCLISSS-LDGTIKLWACSENES 384
Query: 373 L---HTLDHNDIITALC----FSPNRYWLCAAFGPSIKIWDLESKEMVEELRPEIINQTQ 531
L T + LC C+ ++ I+DL S EE QT
Sbjct: 385 LKVVQTRKQELSVHTLCGMHDAEAKPIMFCSYQNGAVGIFDLPS---FEERGKMFSTQTI 441
Query: 532 TSKTDPPQCLSLAWSTDGQTLFAGYSDNTIRVWQVS 639
+ T P G LF+G +RVW ++
Sbjct: 442 CTLTIGP----------GGLLFSGDKSGNLRVWSLA 467
>At2g18900.1 68415.m02205 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to LACK protective antigen (GI:13625467)
[Leishmania donovani]
Length = 804
Score = 32.7 bits (71), Expect = 0.27
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +1
Query: 265 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGK 369
HS +N + S DG+ SGG++ ++W L+ GK
Sbjct: 282 HSAEVNVLNFSSDGAYLYSGGREGVLVVWQLDTGK 316
>At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 447
Score = 32.7 bits (71), Expect = 0.27
Identities = 33/123 (26%), Positives = 53/123 (43%), Gaps = 4/123 (3%)
Frame = +1
Query: 262 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL-NDGKHLHTLDHN-DIITALCF-SPNRY 432
GH Y + P+G + A+G +D LWD+ N + L L N I AL F S R+
Sbjct: 317 GHLDYSFSSAWHPNGQILATGNQDTTCRLWDVRNLSQSLKVLKGNMGAIRALRFTSDGRF 376
Query: 433 WLCAAFGPSIKIWDLESKEMVEELRPEIINQTQTSKTDP-PQCLSLAWSTDGQTLFAGYS 609
A + ++D E+ +Q + D + +++S D + LF G +
Sbjct: 377 LAMAEPADFVHLFDTEA------------GYSQCQEIDLFGEIAGISFSPDTEALFVGVA 424
Query: 610 DNT 618
D T
Sbjct: 425 DRT 427
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +1
Query: 562 SLAWSTDGQTLFAGYSDNTIRVWQV 636
S AW +GQ L G D T R+W V
Sbjct: 324 SSAWHPNGQILATGNQDTTCRLWDV 348
>At3g26480.1 68416.m03301 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (5 copies, 2 below cutoff); related to
LACK protective antigen (GI:13625467) [Leishmania
donovani]
Length = 764
Score = 32.3 bits (70), Expect = 0.36
Identities = 23/88 (26%), Positives = 35/88 (39%), Gaps = 2/88 (2%)
Frame = +1
Query: 379 TLDHNDIITALCFSPNRYWLCAA-FGPSIKIW-DLESKEMVEELRPEIINQTQTSKTDPP 552
TL H ++IT F PN+ L A + IW D E + T
Sbjct: 188 TLHHTELITVFAFHPNQRILAAGDVTGRVLIWKDNGIGEFTSVKTEDDTESCTTFNWHSA 247
Query: 553 QCLSLAWSTDGQTLFAGYSDNTIRVWQV 636
+ L +S+DG L++G VW++
Sbjct: 248 EVTVLNFSSDGALLYSGVKAGDFVVWEL 275
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 265 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGK 369
HS + + S DG+L SG K ++W+L GK
Sbjct: 245 HSAEVTVLNFSSDGALLYSGVKAGDFVVWELGTGK 279
>At3g21060.1 68416.m02662 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Retinoblastoma-binding protein 5 (RBBP-5)
[Homo sapiens](RBQ-3)
Length = 547
Score = 32.3 bits (70), Expect = 0.36
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Frame = +1
Query: 256 HLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND---GKHLHTLDHNDIITALCFSP- 423
+L H G + V + GSL A+G D ++WD K + D + IT++ +S
Sbjct: 20 YLEH-GVIKCVAFNHRGSLLAAGCADGGCVIWDFETRGIAKEIRDNDCSAAITSVSWSKY 78
Query: 424 NRYWLCAAFGPSIKIWDLESKEMV 495
L +A S+ +WD+ + E +
Sbjct: 79 GHRLLVSAADKSLTLWDVSTGEKI 102
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = +1
Query: 466 IWDLESKEMVEELRPEIINQTQTSKTDPPQCLSLAWSTDGQTLFAGYSDNTIRVWQVS 639
IWD E++ + +E+R N + T S++WS G L +D ++ +W VS
Sbjct: 49 IWDFETRGIAKEIRD---NDCSAAIT------SVSWSKYGHRLLVSAADKSLTLWDVS 97
>At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP:O43684)[Homo sapiens]
Length = 339
Score = 32.3 bits (70), Expect = 0.36
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 93
H K V V +S Q+++GS DKTIK W+
Sbjct: 96 HEKPVRCVEYSYAAGQVITGSWDKTIKCWD 125
>At1g49540.1 68414.m05553 transducin family protein / WD-40 repeat
family protein similar to signal transducer and
activator of transcription interacting protein 1
(GI:15929722) {Mus musculus}; similar to hypothetical
protein GB:AAD43147 GI:5430747 from (Arabidopsis
thaliana); contains Pfam PF00400: WD domain, G-beta
repeat (11 copies, 2 weak)
Length = 840
Score = 32.3 bits (70), Expect = 0.36
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 9/66 (13%)
Frame = +1
Query: 61 GSRDKTIKLWNTLAECKYT--IQDDGHSDWVSCVRFS-PNHANP------IIVSCGWDRT 213
G D IKL++ K+T + GH+DW+ + FS P H ++VS D+
Sbjct: 196 GGLDNKIKLYSGERTGKFTSVCELKGHTDWIRSLDFSLPLHTTEEIPNSIMLVSSSQDKV 255
Query: 214 VKVWHL 231
+++W L
Sbjct: 256 IRIWKL 261
>At5g58760.1 68418.m07360 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
damage-specific DNA binding protein 2 (GI:10798819)
[Homo sapiens]
Length = 557
Score = 31.9 bits (69), Expect = 0.47
Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = +1
Query: 184 IIVSCGWDRTVKVWHLTNC--KLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAMLWD 354
+++SCG D ++W + K ++ L H +N+ SP G+ + +D + +WD
Sbjct: 327 LLLSCGNDHFARIWDMRKLQPKASLHDLAHKRVVNSAYFSPSSGTKILTTCQDNRIRIWD 386
>At4g21130.1 68417.m03055 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); some
similarity to a group of proteins with homology to
mammalian apoptosis regulators identified in zebrafish
(PUBMED:10917738)Apaf-1(gi:7677507)
Length = 537
Score = 31.9 bits (69), Expect = 0.47
Identities = 24/95 (25%), Positives = 38/95 (40%), Gaps = 17/95 (17%)
Frame = +1
Query: 265 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDL----------------NDGKHLHTLDHND 396
H+ + VS DG A+GG D LWD+ D H H
Sbjct: 205 HNKQSLALAVSSDGRYLATGGVDCHVHLWDIRTREHVQVNKLKNNQVKDSVHCAFTGHCG 264
Query: 397 IITALCFSPNRYWL-CAAFGPSIKIWDLESKEMVE 498
I+++LCF L ++ ++ IW+ E + +E
Sbjct: 265 IVSSLCFREGTAELFSGSYDGTLSIWNAEHRTYIE 299
>At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400); phytochrome
A supressor spa1 (GI:4809171) [Arabidopsis thaliana]
Length = 837
Score = 31.9 bits (69), Expect = 0.47
Identities = 42/167 (25%), Positives = 71/167 (42%), Gaps = 2/167 (1%)
Frame = +1
Query: 187 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAMLWDLND 363
I S +D V++W + +L H + ++ +S D +L ASG D
Sbjct: 599 IASSNFDGVVQIWDVARSQLVTEMKEHKKRVWSIDISSADPTLLASGSDD--------GT 650
Query: 364 GKHLHTLDHNDIITALCFSPNRYWLCAAFGPSIKIWDLESKEMVEELR-PEIINQTQTSK 540
G + T+ + + F P+ AFG + + K +LR P+I T
Sbjct: 651 GVSIGTIKTKANVCCVQF-PSDSGRSLAFGSA------DHKVYYYDLRNPKIPLCTMIGH 703
Query: 541 TDPPQCLSLAWSTDGQTLFAGYSDNTIRVWQVSISAR*A*LSTLISF 681
+ + +S D TL + +DNT+++W +S+SA S L SF
Sbjct: 704 S---KTVSYVKFVDSSTLVSSSTDNTLKLWDLSMSASGINESPLHSF 747
Score = 31.1 bits (67), Expect = 0.82
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 93
H+K V V F VD+ +VS S D T+KLW+
Sbjct: 703 HSKTVSYVKF-VDSSTLVSSSTDNTLKLWD 731
>At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP|O43684)[Homo sapiens]
Length = 340
Score = 31.5 bits (68), Expect = 0.62
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 93
H K V V +S Q+++GS DKT+K W+
Sbjct: 97 HDKAVRCVEYSYAAGQVITGSWDKTVKCWD 126
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 133 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 225
H V CV +S +A +++ WD+TVK W
Sbjct: 97 HDKAVRCVEYS--YAAGQVITGSWDKTVKCW 125
>At5g14530.1 68418.m01703 transducin family protein / WD-40 repeat
family protein similar to Will die slowly protein
(SP:Q9V3J8) [Drosophila melanogaster] ; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies, 1 weak)
Length = 330
Score = 31.1 bits (67), Expect = 0.82
Identities = 14/53 (26%), Positives = 28/53 (52%)
Frame = +1
Query: 19 LSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHA 177
+ F+ D + ++SGS D T+ WN + + + + VSC++++P A
Sbjct: 248 IEATFTPDGKYVLSGSGDGTLHAWN-IENPSEVARWENNIGVVSCLKWAPRRA 299
Score = 28.3 bits (60), Expect = 5.8
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 93
H V+S+ S N +SGS D++++LW+
Sbjct: 113 HKDRVVSLCMSPINDSFMSGSLDRSVRLWD 142
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +1
Query: 289 TVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHN-DIITALCFSPNRYWLCAA 447
T +PDG SG D W++ + + ++N +++ L ++P R AA
Sbjct: 251 TFTPDGKYVLSGSGDGTLHAWNIENPSEVARWENNIGVVSCLKWAPRRAMFVAA 304
>At5g60940.2 68418.m07645 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 337
Score = 30.7 bits (66), Expect = 1.1
Identities = 23/82 (28%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Frame = +1
Query: 25 VAFSVDNRQIVSGSRDKTIKLWNTL-AECKYTIQD-DGHSDWVSCVRFSPNHANPIIVSC 198
V +S ++ S+D I+L++ + A+C +I + G S+ S V F+ + ++S
Sbjct: 180 VRYSSTGSIYITASKDGAIRLFDGVSAKCVRSIGNAHGKSEVTSAV-FTKDQR--FVLSS 236
Query: 199 GWDRTVKVWHLTNCKLKINHLG 264
G D TVK+W + + ++ +LG
Sbjct: 237 GKDSTVKLWEIGSGRMVKEYLG 258
Score = 30.7 bits (66), Expect = 1.1
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 13 DVLSVAFSVDNRQIVSGSRDKTIKLW 90
+V S F+ D R ++S +D T+KLW
Sbjct: 220 EVTSAVFTKDQRFVLSSGKDSTVKLW 245
Score = 29.9 bits (64), Expect = 1.9
Identities = 25/126 (19%), Positives = 52/126 (41%), Gaps = 5/126 (3%)
Frame = +1
Query: 7 TKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA-EC--KYTIQDDGHSDWVSCVRFSPNHA 177
T +V S++F +++G+ L++ +C D G S ++ VR+S +
Sbjct: 128 THNVRSISFHPSGEFLLAGTDHPIPHLYDVNTYQCFLPSNFPDSGVSGAINQVRYSSTGS 187
Query: 178 NPIIVSCGWDRTVKVWH--LTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 351
I ++ D ++++ C I + + + + D S GKD LW
Sbjct: 188 --IYITASKDGAIRLFDGVSAKCVRSIGNAHGKSEVTSAVFTKDQRFVLSSGKDSTVKLW 245
Query: 352 DLNDGK 369
++ G+
Sbjct: 246 EIGSGR 251
>At5g60940.1 68418.m07644 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 429
Score = 30.7 bits (66), Expect = 1.1
Identities = 23/82 (28%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Frame = +1
Query: 25 VAFSVDNRQIVSGSRDKTIKLWNTL-AECKYTIQD-DGHSDWVSCVRFSPNHANPIIVSC 198
V +S ++ S+D I+L++ + A+C +I + G S+ S V F+ + ++S
Sbjct: 272 VRYSSTGSIYITASKDGAIRLFDGVSAKCVRSIGNAHGKSEVTSAV-FTKDQR--FVLSS 328
Query: 199 GWDRTVKVWHLTNCKLKINHLG 264
G D TVK+W + + ++ +LG
Sbjct: 329 GKDSTVKLWEIGSGRMVKEYLG 350
Score = 30.7 bits (66), Expect = 1.1
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 13 DVLSVAFSVDNRQIVSGSRDKTIKLW 90
+V S F+ D R ++S +D T+KLW
Sbjct: 312 EVTSAVFTKDQRFVLSSGKDSTVKLW 337
Score = 29.9 bits (64), Expect = 1.9
Identities = 25/126 (19%), Positives = 52/126 (41%), Gaps = 5/126 (3%)
Frame = +1
Query: 7 TKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA-EC--KYTIQDDGHSDWVSCVRFSPNHA 177
T +V S++F +++G+ L++ +C D G S ++ VR+S +
Sbjct: 220 THNVRSISFHPSGEFLLAGTDHPIPHLYDVNTYQCFLPSNFPDSGVSGAINQVRYSSTGS 279
Query: 178 NPIIVSCGWDRTVKVWH--LTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 351
I ++ D ++++ C I + + + + D S GKD LW
Sbjct: 280 --IYITASKDGAIRLFDGVSAKCVRSIGNAHGKSEVTSAVFTKDQRFVLSSGKDSTVKLW 337
Query: 352 DLNDGK 369
++ G+
Sbjct: 338 EIGSGR 343
>At5g14050.1 68418.m01644 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to unknown protein (ref|NP_057085.1)
Length = 546
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +1
Query: 232 TNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHT-LDHNDII-T 405
T K I L +G + ++ S DG S G D + +WDL K L+ +D T
Sbjct: 362 TKTKELIGTLKMNGSVRSLAFSEDGKHLLSSGGDGQVYVWDLRTMKCLYKGVDEGSTCGT 421
Query: 406 ALCFSPN 426
+LC S N
Sbjct: 422 SLCSSLN 428
>At5g05570.1 68418.m00605 transducin family protein / WD-40 repeat
family protein similar to unknown protein (pir||T04661);
contains Pfam PF00400: WD domain, G-beta repeat (4
copies, 2 weak)|8683726|gb|AV524198.1|AV524198
Length = 1124
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +1
Query: 475 LESKEMVEELRPEIINQTQTSKTDPPQCLSLAW-STDGQTLFAGYSDNTIRVWQVS 639
+E K + + L ++ + D + SL W STDG L GY D I W S
Sbjct: 232 VEGKTVADSLEASH-DELSNLELDGKEISSLCWASTDGSVLAVGYVDGDILFWDFS 286
>At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 (4
significant) WD-40 repeats (PF0400); identical to WD-40
repeat protein MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 507
Score = 30.3 bits (65), Expect = 1.4
Identities = 26/79 (32%), Positives = 34/79 (43%), Gaps = 4/79 (5%)
Frame = +1
Query: 130 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHL---TNCKLKINHLGHSGYLNTVTVSP 300
GH D V V FSP A S G D + +W TN K+ H L+ V +P
Sbjct: 290 GHEDTVEDVAFSPTSAQE-FCSVGDDSCLILWDARTGTNPVTKVEK-AHDADLHCVDWNP 347
Query: 301 -DGSLCASGGKDMKAMLWD 354
D +L +G D L+D
Sbjct: 348 HDDNLILTGSADNTVRLFD 366
Score = 27.9 bits (59), Expect = 7.7
Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Frame = +1
Query: 40 DNRQIVSGSRDKTIKLWNTLAECKYTIQD-----DGHSDWVSCVRFSPNHANPIIVSCGW 204
D+ I++GS D T++L++ + +GH V CV++SP+ ++ + S
Sbjct: 349 DDNLILTGSADNTVRLFDRRKLTANGVGSPIYKFEGHKAAVLCVQWSPDKSS-VFGSSAE 407
Query: 205 DRTVKVW 225
D + +W
Sbjct: 408 DGLLNIW 414
>At4g34280.1 68417.m04873 transducin family protein / WD-40 repeat
family protein similar to TUPA (GI:11066216) [Emericella
nidulans]; similar to damage-specific DNA binding
protein 2, Homo sapiens ,PIR2:I38909; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies,1
weak)|19797453|gb|AU229277.1|AU229277
Length = 783
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/68 (26%), Positives = 35/68 (51%)
Frame = +1
Query: 28 AFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWD 207
A S D + SG K + L++ + + + H + ++ V+FS NH+ + + +D
Sbjct: 548 ANSTDQLFLASGY-SKDVALYDIGRGTRLQVFANMHQEHINVVKFS-NHSPFLFATSSFD 605
Query: 208 RTVKVWHL 231
+ VK+W L
Sbjct: 606 KDVKLWDL 613
>At2g46560.1 68415.m05808 transducin family protein / WD-40 repeat
family protein similar to CPY (GI:3096961) {Chironomus
thummi}; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies, 3 weak)|9780477|gb|BE522499.1|BE522499
Length = 2471
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +1
Query: 265 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLH 378
H G + + P SL +G KD + LWD K +H
Sbjct: 2374 HLGSVTKIATIPRTSLFLTGSKDGEVKLWDAKAAKLIH 2411
>At4g18905.1 68417.m02787 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 494
Score = 29.5 bits (63), Expect = 2.5
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 16/78 (20%)
Frame = +1
Query: 454 PSIKIWDLESKEMV------EELRPEIINQTQTSKTDPPQ---------CLSLAWSTDGQ 588
P+I+IWDL+ ++ V + I+++ + SK P+ L LAW+ + +
Sbjct: 219 PTIEIWDLDVRDEVLPCIQLGGIEEMIVSKKKKSKKQKPKFKEGSHTESVLGLAWNKEFR 278
Query: 589 TLFAGYS-DNTIRVWQVS 639
+ A S D ++VW V+
Sbjct: 279 NILASASADKKVKVWDVA 296
Score = 27.9 bits (59), Expect = 7.7
Identities = 22/81 (27%), Positives = 43/81 (53%), Gaps = 7/81 (8%)
Frame = +1
Query: 4 HTKD--VLSVAFSVDNRQIVS-GSRDKTIKLW---NTLAECKYTIQDDGHSDWVSCVRFS 165
H +D V S+++++ +++ GS DK++KLW N C T Q + + V + F+
Sbjct: 401 HAQDRGVSSISYNISTPNLLATGSMDKSVKLWDLSNNEPSCIATHQPNAGA--VFSISFA 458
Query: 166 PNHANPIIVSCGWDR-TVKVW 225
+ NP +++ G + + VW
Sbjct: 459 VD--NPFLLAIGGSKGELHVW 477
>At3g49400.1 68416.m05400 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400); low
similarity (47%) to Agamous-like MADS box protein AGL5
(SP:P29385) {Arabidopsis thaliana}
Length = 892
Score = 29.5 bits (63), Expect = 2.5
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 565 LAWSTDGQTLFAGYSDNTIRVW 630
LAWS DG+ L++ DN +R W
Sbjct: 442 LAWSYDGRCLYSCSQDNYVRSW 463
>At1g69350.1 68414.m07958 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile: PF01535: PPR repeat
Length = 787
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = +2
Query: 428 DTGY-VLLSDLPSRSGIWKARRWLKSSGLKSLTKRKLPRQTLLSV 559
DTGY LLS++ + G W+ R L+S+ +KS +K+P + + +
Sbjct: 705 DTGYYTLLSNIYAEEGEWEEFRRLRSA-MKSSNLKKVPGYSAIEI 748
>At1g27840.1 68414.m03412 transducin family protein / WD-40 repeat
family protein contains similarity to cockayne syndrome
complementation group A protein GB:U28413 GI:975301 from
[Homo sapiens]; confirmed by cDNA gi:1598289
Length = 450
Score = 29.5 bits (63), Expect = 2.5
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +1
Query: 265 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKH 372
H G + + + DG S G D + LWD+ G++
Sbjct: 311 HYGAVTGLKATNDGMYLLSAGSDSRIRLWDIESGRN 346
>At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8
WD-40 repeats (PF00400) (2 weak)
Length = 1108
Score = 29.1 bits (62), Expect = 3.3
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 5/74 (6%)
Frame = +1
Query: 265 HSGYLNTVT-VSPDGSLCA-SGGKDMKAMLWDLNDGKHLHTLDHNDIITALC--FSPN-R 429
H G +N + +P+ LC + G D +WD++ KH H+ + ++C + N +
Sbjct: 451 HVGAVNDLAFANPNRQLCVITCGDDKLIKVWDVSGRKHFTFEGHDAPVYSICPHYKENIQ 510
Query: 430 YWLCAAFGPSIKIW 471
+ A IK W
Sbjct: 511 FIFSTAIDGKIKAW 524
Score = 28.3 bits (60), Expect = 5.8
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +1
Query: 127 DGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCK 243
D H V+ + F+ + +++CG D+ +KVW ++ K
Sbjct: 449 DAHVGAVNDLAFANPNRQLCVITCGDDKLIKVWDVSGRK 487
Score = 27.9 bits (59), Expect = 7.7
Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 13/110 (11%)
Frame = +1
Query: 349 WDLND--GKHLHTLDHNDIITALCFSP--NRYWLCAAFGPSIKIWDLESKEMVEELRP-- 510
W L D K L +T++ F P N L + I +W+L ++E + RP
Sbjct: 329 WSLEDLPTKAALALHQGSTVTSMEFYPMQNTLLLVGSATGEITLWELAARERLVS-RPFK 387
Query: 511 --EIIN-----QTQTSKTDPPQCLSLAWSTDGQTLFAGYSDNTIRVWQVS 639
++ N Q +K P +AWS DG + ++ + I+++ S
Sbjct: 388 IWDMSNCSHQFQALIAKETPISVTRVAWSPDGNFIGVAFTKHLIQLYAFS 437
>At2g25420.1 68415.m03045 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (3 repeats)
Length = 717
Score = 29.1 bits (62), Expect = 3.3
Identities = 27/117 (23%), Positives = 49/117 (41%), Gaps = 10/117 (8%)
Frame = +1
Query: 4 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGH----------SDWVSC 153
H + + +AFS +VS D + LW+T + K T ++ + V+
Sbjct: 510 HDQKITCLAFSRCFNVLVSSDSDGKLCLWSTKSWVKLTSKNSTRKFCNRSNLESTSLVTH 569
Query: 154 VRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASG 324
++F P ++V GW +V L +C+L+ + + T S DG + G
Sbjct: 570 IQFDPYQIELLVVHDGWIGLYEVRTL-DCRLQWIPDASDPAITSATYSSDGEIIYVG 625
>At4g29380.1 68417.m04197 protein kinase family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat; contains Pfam PF00069: Protein kinase domain;
contains PF02985: HEAT repeat; similar to adaptor protein
(GI:1817584) [Homo sapiens]; similar to VPS15 protein
(GI:6103009) [Pichia pastoris]
Length = 1494
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 1 DHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 96
+H V +A S D+ VS S D T+K+W++
Sbjct: 1079 EHRSAVNDIATSSDHSFFVSASDDSTVKVWDS 1110
>At1g64350.1 68414.m07292 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to nuclear pore protein SEH1 (SP:P53011)
[Saccharomyces cerevisiae]
Length = 326
Score = 28.7 bits (61), Expect = 4.4
Identities = 22/91 (24%), Positives = 40/91 (43%), Gaps = 4/91 (4%)
Frame = +1
Query: 385 DHNDIITALCFSPN---RYWLCA-AFGPSIKIWDLESKEMVEELRPEIINQTQTSKTDPP 552
D D + AL ++PN Y + A A I IW + +E P + + +
Sbjct: 224 DKGDPVYALSWAPNIGRPYEVVAVATHKGIGIWHVGLAPDLEGRLP--VKKVSSLSGHQG 281
Query: 553 QCLSLAWSTDGQTLFAGYSDNTIRVWQVSIS 645
+ + W G TL + SD +++WQ +++
Sbjct: 282 EVWQMEWDMSGMTLASTGSDGMVKLWQSNLN 312
>At1g63360.1 68414.m07162 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 884
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +1
Query: 349 WDLNDGKHLHTLDHNDIIT 405
WDLN K L TL+H +I+T
Sbjct: 652 WDLNTVKELETLEHLEILT 670
>At1g62630.1 68414.m07066 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 893
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +1
Query: 349 WDLNDGKHLHTLDHNDIIT 405
WDLN K L TL+H +I+T
Sbjct: 654 WDLNTVKELETLEHLEILT 672
>At5g13850.1 68418.m01619 nascent polypeptide-associated complex
(NAC) domain-containing protein similar to alpha-NAC,
non-muscle form [Mus musculus] GI:1666690; contains Pfam
profile PF01849: NAC domain
Length = 159
Score = 28.3 bits (60), Expect = 5.8
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3
Query: 356 RSHNIAFMSLPPDAHKEPSGDTVTVF 279
+S NI F+ PD K P+ DT +F
Sbjct: 84 KSKNILFVISKPDVFKSPASDTYVIF 109
>At3g12390.1 68416.m01544 nascent polypeptide associated complex
alpha chain protein, putative / alpha-NAC, putative
similar to alpha-NAC, non-muscle form [Mus musculus]
GI:1666690; contains Pfam profiles PF01849: NAC domain,
PF00627: UBA/TS-N domain
Length = 203
Score = 28.3 bits (60), Expect = 5.8
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3
Query: 356 RSHNIAFMSLPPDAHKEPSGDTVTVF 279
+S NI F+ PD K P+ DT +F
Sbjct: 88 KSKNILFVISKPDVFKSPASDTYVIF 113
>At1g78770.1 68414.m09180 cell division cycle family protein similar
to cell division cycle protein GI:603230 from [Homo
sapiens]; contains Pfam profile PF00515 TPR Domain
148977 (apparently not full-length).
Length = 543
Score = 28.3 bits (60), Expect = 5.8
Identities = 17/66 (25%), Positives = 33/66 (50%)
Frame = +1
Query: 385 DHNDIITALCFSPNRYWLCAAFGPSIKIWDLESKEMVEELRPEIINQTQTSKTDPPQCLS 564
+ + ++++L FSP WL + + IK +D KE EL+ + + + ++
Sbjct: 180 EESSLLSSLQFSPEDGWLSSFYSCLIKKYD---KESTVELKFKKLENETSGSVSGSSMIT 236
Query: 565 LAWSTD 582
LA +TD
Sbjct: 237 LANNTD 242
>At5g01290.1 68418.m00039 mRNA capping enzyme family protein similar
to mRNA capping enzyme [Xenopus laevis] GI:7239232;
contains Pfam profiles PF01331: mRNA capping enzyme
catalytic domain, PF03919: mRNA capping enzyme
C-terminal domain
Length = 607
Score = 27.9 bits (59), Expect = 7.7
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 166 PNHANPIIVSCGWDRTVKVW 225
P+ N IV C WD+ KVW
Sbjct: 527 PSSYNGKIVECAWDKDKKVW 546
>At4g07800.1 68417.m01233 hypothetical protein
Length = 448
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = +1
Query: 352 DLNDGKHLHTLDHNDIITALCFSPNRYWLCAAFGPSIKIWDLESKEMVE 498
D+ + L+ L N +I LC S N LC G K++ + +E+ +
Sbjct: 159 DIETEQELYELIKNSMIHGLCGSANTNSLCMVDGQCSKLYPKKHQELTK 207
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,861,852
Number of Sequences: 28952
Number of extensions: 407607
Number of successful extensions: 2500
Number of sequences better than 10.0: 219
Number of HSP's better than 10.0 without gapping: 1274
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2029
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1672953192
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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