Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00100
(789 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase cyc... 99 3e-21
At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase cyc... 96 3e-20
At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase, ch... 95 5e-20
At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase, pu... 93 2e-19
At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase / c... 93 2e-19
At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase / c... 93 2e-19
At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase / c... 92 3e-19
At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase, pu... 87 1e-17
At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase, cy... 85 5e-17
At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase, pu... 83 2e-16
At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase / c... 82 4e-16
At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase, pu... 82 5e-16
At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase, pu... 81 1e-15
At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase / c... 80 1e-15
At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase, pu... 79 3e-15
At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase cyc... 79 3e-15
At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase cyc... 79 3e-15
At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase cyc... 75 4e-14
At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase cyc... 57 2e-08
At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein, pu... 56 3e-08
At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase cyc... 55 6e-08
At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase cyc... 51 1e-06
At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase, pu... 49 3e-06
At1g74070.1 68414.m08579 peptidyl-prolyl cis-trans isomerase cyc... 44 2e-04
At3g66654.3 68416.m00779 peptidyl-prolyl cis-trans isomerase cyc... 40 0.002
At3g66654.2 68416.m00778 peptidyl-prolyl cis-trans isomerase cyc... 40 0.002
At3g66654.1 68416.m00777 peptidyl-prolyl cis-trans isomerase cyc... 40 0.002
At5g35100.1 68418.m04153 peptidyl-prolyl cis-trans isomerase cyc... 38 0.006
At2g47320.1 68415.m05907 peptidyl-prolyl cis-trans isomerase cyc... 38 0.008
At1g26940.1 68414.m03284 peptidyl-prolyl cis-trans isomerase cyc... 38 0.010
At3g02610.1 68416.m00252 acyl-[acyl-carrier-protein] desaturase,... 30 2.0
At1g04600.1 68414.m00454 myosin, putative similar to myosin (GI:... 29 4.6
>At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 259
Score = 99.1 bits (236), Expect = 3e-21
Identities = 47/68 (69%), Positives = 54/68 (79%)
Frame = +2
Query: 512 GAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRP 691
G G LSMANAG +TNGSQFFI T+KT WLDGRHVVFG+V+EGM+VV+ IE T DRP
Sbjct: 183 GPGVLSMANAGPNTNGSQFFICTIKTSWLDGRHVVFGQVIEGMEVVKLIEEQETDRGDRP 242
Query: 692 VKDVVISD 715
K VVI+D
Sbjct: 243 RKKVVIAD 250
Score = 86.6 bits (205), Expect = 2e-17
Identities = 43/89 (48%), Positives = 55/89 (61%), Gaps = 3/89 (3%)
Frame = +3
Query: 255 FDMKIGDDN---IGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQX 425
FD+ +G+ G IVIGL+G VP+T ENF L +G GYKGS FHRVI++FMIQ
Sbjct: 94 FDISVGNPVGKLAGRIVIGLYGDDVPQTVENFRALCTGEKGFGYKGSTFHRVIRDFMIQG 153
Query: 426 XXXXXXXXXXXRSIYGERFEDENFKLKHM 512
+S+YG F+DENFKL H+
Sbjct: 154 GDFEKGNGTGGKSVYGRTFKDENFKLSHV 182
>At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to SP|P87051
Peptidyl-prolyl cis-trans isomerase cyp2 (EC 5.2.1.8)
(Cyclophilin cyp2) {Schizosaccharomyces pombe}; contains
Pfam profiles PF00160: peptidyl-prolyl cis-trans
isomerase cyclophilin-type, PF00400: WD domain G-beta
repeat
Length = 631
Score = 95.9 bits (228), Expect = 3e-20
Identities = 44/62 (70%), Positives = 50/62 (80%)
Frame = +2
Query: 524 LSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDV 703
LSMANAG +TNGSQFFITTV TPWLD +H VFG+V++GMDVVQ IE T NDRP +DV
Sbjct: 562 LSMANAGPNTNGSQFFITTVATPWLDNKHTVFGRVVKGMDVVQGIEKVKTDKNDRPYQDV 621
Query: 704 VI 709
I
Sbjct: 622 KI 623
Score = 41.9 bits (94), Expect = 5e-04
Identities = 29/77 (37%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +3
Query: 282 IGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXR 461
+G I + L+ + PKT ENF + Y FHRVI+ FMIQ +
Sbjct: 484 LGDIHMKLYPEECPKTVENFTTHCRNGY---YDNHLFHRVIRGFMIQ-TGDPLGDGTGGQ 539
Query: 462 SIYGERFEDENFK-LKH 509
SI+G FEDE K L+H
Sbjct: 540 SIWGREFEDEFHKSLRH 556
>At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase,
chloroplast / cyclophilin / rotamase / cyclosporin
A-binding protein (ROC4) identical to peptidyl-prolyl
cis-trans isomerase, chloroplast precursor, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34791; identical to
cDNA nuclear-encoded chloroplast stromal cyclophilin
(ROC4) GI:405130
Length = 260
Score = 95.1 bits (226), Expect = 5e-20
Identities = 46/85 (54%), Positives = 55/85 (64%)
Frame = +3
Query: 255 FDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXX 434
FD++IG + G IV+GLFG+ VPKT ENF L + GYKGS FHR+IK+FMIQ
Sbjct: 99 FDVEIGGEVAGRIVMGLFGEVVPKTVENFRALCTGEKKYGYKGSSFHRIIKDFMIQGGDF 158
Query: 435 XXXXXXXXRSIYGERFEDENFKLKH 509
SIYG +FEDENF LKH
Sbjct: 159 TEGNGTGGISIYGAKFEDENFTLKH 183
Score = 83.8 bits (198), Expect = 1e-16
Identities = 40/62 (64%), Positives = 47/62 (75%)
Frame = +2
Query: 512 GAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRP 691
G G LSMANAG +TNGSQFFI TVKT WLD +HVVFG+V+EGM +V+ +E T A D P
Sbjct: 185 GPGILSMANAGPNTNGSQFFICTVKTSWLDNKHVVFGQVIEGMKLVRTLESQETRAFDVP 244
Query: 692 VK 697
K
Sbjct: 245 KK 246
>At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
(ROC7) similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 204
Score = 93.1 bits (221), Expect = 2e-19
Identities = 46/69 (66%), Positives = 52/69 (75%)
Frame = +2
Query: 512 GAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRP 691
G G+LSMANAG+DTNGSQFFITTV T WLDGRHVVFGKV+ GMDVV K+E + P
Sbjct: 132 GPGFLSMANAGQDTNGSQFFITTVTTSWLDGRHVVFGKVVTGMDVVYKVE-AEGNQSGTP 190
Query: 692 VKDVVISDT 718
VVI D+
Sbjct: 191 KSKVVIVDS 199
Score = 89.8 bits (213), Expect = 2e-18
Identities = 53/113 (46%), Positives = 62/113 (54%), Gaps = 7/113 (6%)
Frame = +3
Query: 255 FDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVIKNF 413
FD++I G IV+GLFGKTVPKT ENF L +G G YKGS FHR+I +F
Sbjct: 39 FDVEIDGKAAGRIVMGLFGKTVPKTVENFRALCTGEKGIGKNGKALHYKGSSFHRIIPSF 98
Query: 414 MIQXXXXXXXXXXXXRSIYGERFEDENFKLKHMVLVGYLWLMQAKTQMDLNFS 572
M+Q SIYGE+F DENFKLKH G +L A D N S
Sbjct: 99 MLQGGDFTHGNGMGGESIYGEKFADENFKLKH---TGPGFLSMANAGQDTNGS 148
>At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase /
cyclophilin / rotamase / cyclosporin A-binding protein
(ROC1) identical to SP|P34790 Peptidyl-prolyl cis-trans
isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin)
(Cyclosporin A-binding protein) {Arabidopsis thaliana}
Length = 172
Score = 93.1 bits (221), Expect = 2e-19
Identities = 44/68 (64%), Positives = 55/68 (80%)
Frame = +2
Query: 512 GAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRP 691
G G LSMANAG +TNGSQFFI TVKT WLDG+HVVFG+V+EG+DVV+ IE V ++ +P
Sbjct: 101 GPGILSMANAGANTNGSQFFICTVKTDWLDGKHVVFGQVVEGLDVVKAIE-KVGSSSGKP 159
Query: 692 VKDVVISD 715
K VV++D
Sbjct: 160 TKPVVVAD 167
Score = 73.3 bits (172), Expect = 2e-13
Identities = 41/92 (44%), Positives = 48/92 (52%), Gaps = 7/92 (7%)
Frame = +3
Query: 255 FDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVIKNF 413
FDM I G IV+ L+ P+T ENF L +G G +KGSKFHRVI NF
Sbjct: 8 FDMTIDGQPAGRIVMELYTDKTPRTAENFRALCTGEKGVGGTGKPLHFKGSKFHRVIPNF 67
Query: 414 MIQXXXXXXXXXXXXRSIYGERFEDENFKLKH 509
M Q SIYG +FEDENF+ KH
Sbjct: 68 MCQGGDFTAGNGTGGESIYGSKFEDENFERKH 99
>At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP2) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443757|gb|AAB71402; similar
to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34790
Length = 174
Score = 93.1 bits (221), Expect = 2e-19
Identities = 44/68 (64%), Positives = 55/68 (80%)
Frame = +2
Query: 512 GAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRP 691
G G LSMANAG +TNGSQFFI TVKT WLDG+HVVFG+V+EG+DVV+ IE + ++ +P
Sbjct: 102 GPGILSMANAGANTNGSQFFICTVKTDWLDGKHVVFGQVVEGLDVVKAIE-KIGSSSGKP 160
Query: 692 VKDVVISD 715
K VVI+D
Sbjct: 161 TKPVVIAD 168
Score = 74.1 bits (174), Expect = 9e-14
Identities = 42/92 (45%), Positives = 48/92 (52%), Gaps = 7/92 (7%)
Frame = +3
Query: 255 FDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVIKNF 413
FDM IG G IV+ L+ PKT ENF L +G G +KGS FHRVI NF
Sbjct: 9 FDMTIGGAPAGKIVMELYTDKTPKTAENFRALCTGEKGVGRSGKPLHFKGSSFHRVIPNF 68
Query: 414 MIQXXXXXXXXXXXXRSIYGERFEDENFKLKH 509
M Q SIYG +FEDENF+ KH
Sbjct: 69 MCQGGDFTKGNGTGGESIYGAKFEDENFERKH 100
>At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP5) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443755|gb|AAB71401
Length = 201
Score = 92.3 bits (219), Expect = 3e-19
Identities = 46/69 (66%), Positives = 53/69 (76%)
Frame = +2
Query: 512 GAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRP 691
G G LSMAN+G+DTNGSQFFITTV T WLDGRHVVFGKV++GMDVV KIE + P
Sbjct: 129 GPGVLSMANSGEDTNGSQFFITTVTTSWLDGRHVVFGKVVQGMDVVYKIE-AEGKQSGTP 187
Query: 692 VKDVVISDT 718
VVI+D+
Sbjct: 188 KSKVVIADS 196
Score = 91.1 bits (216), Expect = 8e-19
Identities = 47/92 (51%), Positives = 56/92 (60%), Gaps = 7/92 (7%)
Frame = +3
Query: 255 FDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVIKNF 413
FD++I + G +VIGLFGK VPKT ENF L +G G YKGSKFHR+I +F
Sbjct: 36 FDVEIDGKSAGRVVIGLFGKAVPKTAENFRALCTGEKGVGKSGKPLHYKGSKFHRIIPSF 95
Query: 414 MIQXXXXXXXXXXXXRSIYGERFEDENFKLKH 509
MIQ SIYG++F DENFKLKH
Sbjct: 96 MIQGGDFTHGNGMGGESIYGQKFADENFKLKH 127
>At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 228
Score = 87.0 bits (206), Expect = 1e-17
Identities = 39/50 (78%), Positives = 44/50 (88%)
Frame = +2
Query: 512 GAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIE 661
G G+LSMAN+G D+NGSQFFITTV T WLDG HVVFGKVL GM+VV+KIE
Sbjct: 156 GPGFLSMANSGPDSNGSQFFITTVTTSWLDGHHVVFGKVLSGMEVVRKIE 205
Score = 83.8 bits (198), Expect = 1e-16
Identities = 44/92 (47%), Positives = 52/92 (56%), Gaps = 7/92 (7%)
Frame = +3
Query: 255 FDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVIKNF 413
FD++I G I+IGLFG VPKT ENF L +G G +KGS FHR+I F
Sbjct: 63 FDIQINGSPAGRILIGLFGNIVPKTAENFRSLCTGEKGVGNMGKPLYFKGSSFHRIIPGF 122
Query: 414 MIQXXXXXXXXXXXXRSIYGERFEDENFKLKH 509
MIQ SIYG++F DENFKLKH
Sbjct: 123 MIQGGDFTRGDGRGGESIYGDKFADENFKLKH 154
>At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase,
cytosolic / cyclophilin / rotamase (ROC3) identical to
cytosolic cyclophilin [Arabidopsis thaliana] GI:1305455
Length = 173
Score = 85.0 bits (201), Expect = 5e-17
Identities = 43/68 (63%), Positives = 52/68 (76%)
Frame = +2
Query: 512 GAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRP 691
G G LSMANAG +TNGSQFFI T KT WLDG+HVVFG+V+EG++VV+ IE V + R
Sbjct: 102 GPGILSMANAGANTNGSQFFICTEKTSWLDGKHVVFGQVVEGLNVVRDIE-KVGSDSGRT 160
Query: 692 VKDVVISD 715
K VVI+D
Sbjct: 161 SKPVVIAD 168
Score = 72.5 bits (170), Expect = 3e-13
Identities = 40/92 (43%), Positives = 47/92 (51%), Gaps = 7/92 (7%)
Frame = +3
Query: 255 FDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVIKNF 413
FDM +G + G IV+ L+ T P+T ENF L G G YKGS FHRVI F
Sbjct: 9 FDMTVGGKSAGRIVMELYADTTPETAENFRALCTGERGIGKQGKPLHYKGSSFHRVIPKF 68
Query: 414 MIQXXXXXXXXXXXXRSIYGERFEDENFKLKH 509
M Q SIYG +F+DENF KH
Sbjct: 69 MCQGGDFTAGNGTGGESIYGSKFKDENFIKKH 100
>At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
contains Pfam domain, PF00160: peptidyl-prolyl cis-trans
isomerase, cyclophilin-type
Length = 164
Score = 83.0 bits (196), Expect = 2e-16
Identities = 38/70 (54%), Positives = 49/70 (70%)
Frame = +2
Query: 512 GAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRP 691
GAG LSMANAG +TNGSQFFIT P LDG+H +FG+V GM+V++++ T DRP
Sbjct: 92 GAGILSMANAGPNTNGSQFFITLAPQPSLDGKHTIFGRVCRGMEVIKRLGSVQTDNTDRP 151
Query: 692 VKDVVISDTK 721
+ +V I TK
Sbjct: 152 IHEVKILRTK 161
Score = 48.0 bits (109), Expect = 7e-06
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Frame = +3
Query: 273 DDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXX 452
+ ++G + ++ K P+T NF +L+++ Y FHR++K+F++Q
Sbjct: 15 ETSMGPFTVEMYYKHSPRTCRNFLELSRRGY---YDNVLFHRIVKDFIVQ-GGDPTGTGR 70
Query: 453 XXRSIYGERFEDE-NFKLKH 509
SIYG +FEDE N +LKH
Sbjct: 71 GGESIYGSKFEDEINKELKH 90
>At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP1) / rotamase identical to cyclophilin
(CYP1) gi|992643|gb|AAA75512; similar to peptidyl-prolyl
cis-trans isomerase, PPIase (cyclophilin, cyclosporin
A-binding protein) [Catharanthus roseus]
SWISS-PROT:Q39613
Length = 172
Score = 82.2 bits (194), Expect = 4e-16
Identities = 41/68 (60%), Positives = 52/68 (76%)
Frame = +2
Query: 512 GAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRP 691
GAG LSMAN+G +TNGSQFFI T KT WLDG+HVVFG+V++G+DVV+ IE V + +
Sbjct: 101 GAGILSMANSGPNTNGSQFFICTDKTSWLDGKHVVFGQVVKGLDVVKAIE-KVGSDSGKT 159
Query: 692 VKDVVISD 715
K V I+D
Sbjct: 160 SKVVTITD 167
Score = 66.9 bits (156), Expect = 1e-11
Identities = 39/92 (42%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Frame = +3
Query: 255 FDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVIKNF 413
FDM + IG I + LF T P T ENF L +G G +KGS FHRVI F
Sbjct: 8 FDMSLSGTPIGRIEMELFADTTPNTAENFRALCTGEKGMGKLGKPLHFKGSIFHRVIPGF 67
Query: 414 MIQXXXXXXXXXXXXRSIYGERFEDENFKLKH 509
M Q SIYG +F+DENF KH
Sbjct: 68 MCQGGDFTAKNGTGGESIYGAKFKDENFIKKH 99
>At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 224
Score = 81.8 bits (193), Expect = 5e-16
Identities = 39/68 (57%), Positives = 49/68 (72%)
Frame = +2
Query: 515 AGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPV 694
AG ++MAN G D+NGSQFFITTVK WL+G HVV GKV++GMD V IE + +P
Sbjct: 145 AGMVAMANTGPDSNGSQFFITTVKASWLEGEHVVLGKVIQGMDNVFAIEGGAGTYSGKPR 204
Query: 695 KDVVISDT 718
K VVI+D+
Sbjct: 205 KKVVIADS 212
Score = 72.5 bits (170), Expect = 3e-13
Identities = 39/91 (42%), Positives = 49/91 (53%), Gaps = 7/91 (7%)
Frame = +3
Query: 258 DMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVIKNFM 416
D+ I +G IVIGL+G VPKT ENF L +G+ YKG+ FHR+I F+
Sbjct: 52 DVDIDGQRLGRIVIGLYGTVVPKTVENFRALCTGEKGKTSSGKPLHYKGTPFHRIISGFV 111
Query: 417 IQXXXXXXXXXXXXRSIYGERFEDENFKLKH 509
IQ SIYG F DENFK++H
Sbjct: 112 IQGGDIIHGDGKSSDSIYGGTFPDENFKIQH 142
>At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Homo sapiens]
gi|3647230|gb|AAC60793
Length = 199
Score = 80.6 bits (190), Expect = 1e-15
Identities = 40/73 (54%), Positives = 52/73 (71%), Gaps = 1/73 (1%)
Frame = +2
Query: 500 AEAYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVL-EGMDVVQKIEMTVTG 676
A+ G G LSMAN+G +TNG QFFIT K WLD +HVVFG+VL +G+ V++KIE G
Sbjct: 123 AKHTGPGLLSMANSGPNTNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVMRKIENVAIG 182
Query: 677 ANDRPVKDVVISD 715
N+RP VVI++
Sbjct: 183 PNNRPKLAVVITE 195
Score = 71.3 bits (167), Expect = 7e-13
Identities = 40/90 (44%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Frame = +3
Query: 255 FDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQ---KPEGE--GYKGSKFHRVIKNFMI 419
FD+ IG G I + LF PKT ENF Q + G+ GYK +FHRVIK+FM+
Sbjct: 36 FDVSIGGIPAGRIKMELFADIAPKTAENFRQFCTGELRKAGKPLGYKECQFHRVIKDFMV 95
Query: 420 QXXXXXXXXXXXXRSIYGERFEDENFKLKH 509
Q SIYG +FEDENF KH
Sbjct: 96 QSGDFLKNDGSGCMSIYGHKFEDENFTAKH 125
>At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase /
cyclophilin-40 (CYP40) / rotamase identical to
cyclophilin-40 [Arabidopsis thaliana] GI:13442983;
supporting cDNA gi|13442982|gb|AY026065.1|
Length = 361
Score = 80.2 bits (189), Expect = 1e-15
Identities = 39/66 (59%), Positives = 47/66 (71%)
Frame = +2
Query: 518 GWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVK 697
G LSMAN+G +TNGSQFFITT +T LDG+HVVFG+V +GM VV+ IE P +
Sbjct: 104 GMLSMANSGPNTNGSQFFITTTRTSHLDGKHVVFGRVTKGMGVVRSIEHVSIEEQSCPSQ 163
Query: 698 DVVISD 715
DVVI D
Sbjct: 164 DVVIHD 169
Score = 76.6 bits (180), Expect = 2e-14
Identities = 43/92 (46%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Frame = +3
Query: 258 DMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG--------YKGSKFHRVIKNF 413
D+ IG + G IVI L+ VPKT ENF L +G G YKG++FHRVIK F
Sbjct: 9 DISIGGELEGRIVIELYDDVVPKTAENFRLLCTGEKGLGPNTGVPLHYKGNRFHRVIKGF 68
Query: 414 MIQXXXXXXXXXXXXRSIYGERFEDENFKLKH 509
MIQ SIYG +F+DENF+LKH
Sbjct: 69 MIQGGDISANDGTGGESIYGLKFDDENFELKH 100
>At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Catharanthus roseus] SWISS-PROT:Q39613
Length = 176
Score = 79.4 bits (187), Expect = 3e-15
Identities = 40/68 (58%), Positives = 49/68 (72%)
Frame = +2
Query: 512 GAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRP 691
G G LSMAN+G +TNGSQFFI T KT WLDG+HVVFGKV++G +VV+ +E V P
Sbjct: 101 GPGILSMANSGPNTNGSQFFICTEKTSWLDGKHVVFGKVVDGYNVVKAME-DVGSDMGNP 159
Query: 692 VKDVVISD 715
+ VVI D
Sbjct: 160 SERVVIED 167
Score = 73.3 bits (172), Expect = 2e-13
Identities = 40/92 (43%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Frame = +3
Query: 255 FDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVIKNF 413
FD+ IG G +V+ LF P+T NF L G G YKGS FHR+I F
Sbjct: 8 FDILIGKMKAGRVVMELFADVTPRTANNFRALCTGENGIGKAGKALHYKGSAFHRIIPGF 67
Query: 414 MIQXXXXXXXXXXXXRSIYGERFEDENFKLKH 509
M Q SIYG +FEDENFKLKH
Sbjct: 68 MCQGGDFTRGNGTGGESIYGSKFEDENFKLKH 99
>At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 387
Score = 79.0 bits (186), Expect = 3e-15
Identities = 39/68 (57%), Positives = 50/68 (73%)
Frame = +2
Query: 512 GAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRP 691
GAG LSMAN G +TNGSQFFI + P LDG+HVVFGKV+EGM V++K+E+ T ++ +P
Sbjct: 105 GAGVLSMANCGPNTNGSQFFILFKRQPHLDGKHVVFGKVVEGMAVIKKMELVGT-SDGKP 163
Query: 692 VKDVVISD 715
V I D
Sbjct: 164 TSPVKIID 171
Score = 73.7 bits (173), Expect = 1e-13
Identities = 42/92 (45%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Frame = +3
Query: 258 DMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG--------YKGSKFHRVIKNF 413
D+ IG D + IVI LF VPKT ENF L G G +KGS FHRVIK F
Sbjct: 12 DVSIGGDPVQRIVIELFADVVPKTAENFRALCTGEAGVGKSTGKPLHFKGSSFHRVIKGF 71
Query: 414 MIQXXXXXXXXXXXXRSIYGERFEDENFKLKH 509
M Q SIYG +F DENF+L H
Sbjct: 72 MAQGGDFSNGNGTGGESIYGGKFSDENFRLDH 103
>At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 570
Score = 79.0 bits (186), Expect = 3e-15
Identities = 39/68 (57%), Positives = 50/68 (73%)
Frame = +2
Query: 512 GAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRP 691
GAG LSMAN G +TNGSQFFI + P LDG+HVVFGKV+EGM V++K+E+ T ++ +P
Sbjct: 105 GAGVLSMANCGPNTNGSQFFILFKRQPHLDGKHVVFGKVVEGMAVIKKMELVGT-SDGKP 163
Query: 692 VKDVVISD 715
V I D
Sbjct: 164 TSPVKIID 171
Score = 73.7 bits (173), Expect = 1e-13
Identities = 42/92 (45%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Frame = +3
Query: 258 DMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG--------YKGSKFHRVIKNF 413
D+ IG D + IVI LF VPKT ENF L G G +KGS FHRVIK F
Sbjct: 12 DVSIGGDPVQRIVIELFADVVPKTAENFRALCTGEAGVGKSTGKPLHFKGSSFHRVIKGF 71
Query: 414 MIQXXXXXXXXXXXXRSIYGERFEDENFKLKH 509
M Q SIYG +F DENF+L H
Sbjct: 72 MAQGGDFSNGNGTGGESIYGGKFSDENFRLDH 103
>At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 160
Score = 75.4 bits (177), Expect = 4e-14
Identities = 33/62 (53%), Positives = 45/62 (72%)
Frame = +2
Query: 518 GWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVK 697
G LSMAN+G +TNGSQFFIT K P L+G + +FGKV+ G +V+ +E T TG DRP+
Sbjct: 85 GMLSMANSGPNTNGSQFFITYAKQPHLNGLYTIFGKVIHGFEVLDIMEKTQTGPGDRPLA 144
Query: 698 DV 703
++
Sbjct: 145 EI 146
Score = 45.6 bits (103), Expect = 4e-05
Identities = 31/78 (39%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +3
Query: 279 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXX 458
N+G I +F VPK+ ENF L Y G+ FHR IK FMIQ
Sbjct: 8 NLGDIKCEIFCDEVPKSAENFLALCASGY---YDGTIFHRNIKGFMIQ-GGDPKGTGKGG 63
Query: 459 RSIYGERFEDE-NFKLKH 509
SI+G++F DE LKH
Sbjct: 64 TSIWGKKFNDEIRDSLKH 81
>At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 595
Score = 56.8 bits (131), Expect = 2e-08
Identities = 30/87 (34%), Positives = 47/87 (54%)
Frame = +2
Query: 512 GAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRP 691
G G +SMAN+G TNGSQFF+ L+ +H VFG V+ G+ + +E +DRP
Sbjct: 426 GRGVVSMANSGPHTNGSQFFVLYKSATHLNYKHTVFGGVVGGLATLAAMENVPVDESDRP 485
Query: 692 VKDVVISDTKTEVVAEPFSVTKERLTK 772
++++ I + V P++ E K
Sbjct: 486 LEEIKI--IEASVFVNPYTELDEEEEK 510
Score = 42.3 bits (95), Expect = 4e-04
Identities = 29/76 (38%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +3
Query: 285 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRS 464
G + I L P+ ENF L ++ Y G FHR I+NFMIQ S
Sbjct: 353 GDLNIELHCDIAPRACENFITLCERGY---YNGVAFHRSIRNFMIQ-GGDPTGTGKGGES 408
Query: 465 IYGERFEDE-NFKLKH 509
I+G+ F+DE N KL H
Sbjct: 409 IWGKPFKDEPNSKLLH 424
>At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein,
putative
Length = 506
Score = 56.0 bits (129), Expect = 3e-08
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Frame = +2
Query: 518 GWLSMANAGKDTNGSQFFITTVKT-PWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPV 694
G ++MA+ G++ N SQF+ T +LDG+H VFG++ EG D + +I +RP
Sbjct: 92 GTVAMASGGENLNASQFYFTLRDDLDYLDGKHTVFGQIAEGFDTLTRINEAYVDPKNRPY 151
Query: 695 KDVVISDTKTEVVAEPF 745
K++ I T ++ +PF
Sbjct: 152 KNIRIK--HTHILDDPF 166
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +3
Query: 279 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQ 422
++G IVI L P T +NF +L + + Y G FH V K+F Q
Sbjct: 8 SLGDIVIDLHSDKCPLTCKNFLKLCKI---KYYNGCLFHTVQKDFTAQ 52
>At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein weak similarity to
CARS-Cyp [Homo sapiens] GI:1117968; contains Pfam
profile PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 837
Score = 54.8 bits (126), Expect = 6e-08
Identities = 34/92 (36%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
Frame = +3
Query: 258 DMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG--------YKGSKFHRVIKNF 413
D+ I D T+V LF + PKT+ENF L +G G YKGS FHR++K
Sbjct: 12 DVSIDGDPAETMVFELFPEVAPKTSENFRALCTGEKGIGPRSGKPLHYKGSFFHRIMKGS 71
Query: 414 MIQXXXXXXXXXXXXRSIYGERFEDENFKLKH 509
Q SIY +F DE+ KL+H
Sbjct: 72 SAQAGDFVNRNGTAGESIYAGKFPDESPKLRH 103
Score = 45.2 bits (102), Expect = 5e-05
Identities = 22/48 (45%), Positives = 32/48 (66%)
Frame = +2
Query: 518 GWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIE 661
G LSM+ A +D GS F IT LD +VVFGK+++G ++++KIE
Sbjct: 107 GLLSMSIADRDKFGSHFHITFRPNQQLDRNNVVFGKLIQGKEILKKIE 154
>At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 504
Score = 50.8 bits (116), Expect = 1e-06
Identities = 30/78 (38%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Frame = +2
Query: 518 GWLSMANAGK-DTNGSQFFITTVKTPWLDGRHVVFGKVL-EGMDVVQKIEMTVTGANDRP 691
G ++MANA ++NGSQFF T K WLD +H +FGKV + + + ++ T +DRP
Sbjct: 97 GIVAMANASSPNSNGSQFFFTLDKCDWLDKKHTIFGKVTGDSIYNLLRLGEVDTSKDDRP 156
Query: 692 VKDVVISDTKTEVVAEPF 745
+ D EV+ PF
Sbjct: 157 L-DPAPKILSVEVLWNPF 173
Score = 37.5 bits (83), Expect = 0.010
Identities = 27/70 (38%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +3
Query: 285 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGY-KGSKFHRVIKNFMIQXXXXXXXXXXXXR 461
G I + L+ K PK+ NF QL EGY + FHRVI F++Q
Sbjct: 22 GPIDVELWPKEAPKSVRNFVQLCL----EGYFDNTIFHRVIPGFLVQGGDPTGSGTGGD- 76
Query: 462 SIYGERFEDE 491
SIYG F DE
Sbjct: 77 SIYGGVFADE 86
>At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase PPIase
(cyclophilin, cyclosporin A-binding protein) [Tomato]
SWISS-PROT:P21568
Length = 232
Score = 49.2 bits (112), Expect = 3e-06
Identities = 33/70 (47%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Frame = +2
Query: 512 GAGWLSMANAGKDTNGSQFFITTVKTPW-LDGRHVVFGKVLEGMDVVQKIEMTVTGANDR 688
G G +SMA D+NGSQF I +DG HVV GKV+EG+D+++ IE V R
Sbjct: 98 GPGIISMA----DSNGSQFQIHMKDYGLQVDGDHVVIGKVVEGLDLMRNIEKEVITTTTR 153
Query: 689 -PVKDVVISD 715
P K VVI+D
Sbjct: 154 TPSKPVVIAD 163
Score = 40.7 bits (91), Expect = 0.001
Identities = 29/92 (31%), Positives = 37/92 (40%), Gaps = 7/92 (7%)
Frame = +3
Query: 255 FDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVIKNF 413
FD+ + G IVI LF P+T ENF L G G YKGS F ++ +
Sbjct: 8 FDLTVDGKPAGRIVIELFADLTPRTAENFRGLCTGERGIGKCGKPIHYKGSTFDHIVPDL 67
Query: 414 MIQXXXXXXXXXXXXRSIYGERFEDENFKLKH 509
M I+ E +DE F L H
Sbjct: 68 M----WCGGDIIFENEPIHSEELDDEYFILNH 95
>At1g74070.1 68414.m08579 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 317
Score = 43.6 bits (98), Expect = 2e-04
Identities = 31/66 (46%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Frame = +2
Query: 554 NGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIE--MTVTGANDRPVKDV--VISDTK 721
NG++F IT V +P L+ +V GKVLEGM VV+K+ TV P V VI D K
Sbjct: 230 NGTEFVITAVDSPELEDSVLVIGKVLEGMGVVEKMREVKTVRDNTSSPYFRVAKVIGD-K 288
Query: 722 TEVVAE 739
VVAE
Sbjct: 289 RAVVAE 294
Score = 35.9 bits (79), Expect = 0.031
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +3
Query: 258 DMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFM 416
D+ I + IG I+IGL+G VP T F + G Y+ F +++ ++
Sbjct: 97 DVSIDGEPIGRIIIGLYGDDVPAGTARFSSIVSGKAGITYRRKDFVKIMPGYV 149
>At3g66654.3 68416.m00779 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/50 (40%), Positives = 31/50 (62%)
Frame = +2
Query: 563 QFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVVIS 712
+ ITT P L+ + +VFG+VL+G DVVQ+IE T + +P + I+
Sbjct: 179 ELLITTAPIPDLNDQLIVFGRVLKGEDVVQEIEEVDTDEHFQPKSPIGIT 228
Score = 38.3 bits (85), Expect = 0.006
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = +3
Query: 285 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQ 422
G I + LF + P+ + F L QK + +KG F RVIKN+++Q
Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQK---DHFKGMPFQRVIKNYLVQ 132
>At3g66654.2 68416.m00778 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/50 (40%), Positives = 31/50 (62%)
Frame = +2
Query: 563 QFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVVIS 712
+ ITT P L+ + +VFG+VL+G DVVQ+IE T + +P + I+
Sbjct: 179 ELLITTAPIPDLNDQLIVFGRVLKGEDVVQEIEEVDTDEHFQPKSPIGIT 228
Score = 38.3 bits (85), Expect = 0.006
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = +3
Query: 285 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQ 422
G I + LF + P+ + F L QK + +KG F RVIKN+++Q
Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQK---DHFKGMPFQRVIKNYLVQ 132
>At3g66654.1 68416.m00777 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/50 (40%), Positives = 31/50 (62%)
Frame = +2
Query: 563 QFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVVIS 712
+ ITT P L+ + +VFG+VL+G DVVQ+IE T + +P + I+
Sbjct: 179 ELLITTAPIPDLNDQLIVFGRVLKGEDVVQEIEEVDTDEHFQPKSPIGIT 228
Score = 38.3 bits (85), Expect = 0.006
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = +3
Query: 285 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQ 422
G I + LF + P+ + F L QK + +KG F RVIKN+++Q
Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQK---DHFKGMPFQRVIKNYLVQ 132
>At5g35100.1 68418.m04153 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 290
Score = 38.3 bits (85), Expect = 0.006
Identities = 21/44 (47%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = +2
Query: 548 DTNGSQFFITTVK--TPWLDGRHVVFGKVLEGMDVVQKIEMTVT 673
D +F ITT +P LDG ++VFG VLEG+DVV I T
Sbjct: 191 DYRNVEFLITTGPGPSPQLDGGNIVFGTVLEGLDVVTSISSIPT 234
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +3
Query: 282 IGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRV 401
+G +V+GL+G+ VP T F ++ YK + H++
Sbjct: 85 LGRVVLGLYGRHVPITVSTFKRMCTS-SSTSYKNTPVHKI 123
>At2g47320.1 68415.m05907 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 230
Score = 37.9 bits (84), Expect = 0.008
Identities = 20/57 (35%), Positives = 31/57 (54%)
Frame = +2
Query: 539 AGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVVI 709
A + G +FFI + + L+ + VFG+V +G DVVQ+IE T +P + I
Sbjct: 165 AKNEQGGFEFFIVSAQIKDLNEKLTVFGRVSKGQDVVQEIEEVETDDQYQPKSPIEI 221
Score = 36.3 bits (80), Expect = 0.023
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +3
Query: 273 DDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGY-KGSKFHRVIKNFMIQ 422
D G++ I LF T P + F + Q +GY KG F RV+K+F+IQ
Sbjct: 83 DTGKGSVTIELFKDTAPNVVDQFMKFCQ----DGYFKGFLFSRVVKHFVIQ 129
>At1g26940.1 68414.m03284 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 226
Score = 37.5 bits (83), Expect = 0.010
Identities = 34/100 (34%), Positives = 45/100 (45%), Gaps = 10/100 (10%)
Frame = +2
Query: 518 GWLSMANAGKDTNGSQ--FFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVT---GAN 682
G LSM D N +Q F + P LD ++ VFGKV +G + + K+E T G
Sbjct: 119 GTLSMGRYD-DPNSAQSSFSMLLGNAPHLDRQYAVFGKVTKGDETLSKLEEVPTRREGIF 177
Query: 683 DRPVKDVVI-----SDTKTEVVAEPFSVTKERLTKFIINV 787
P + + I DTK E E SV K RL + V
Sbjct: 178 VMPTERITILSTYYYDTKMESCEEERSVLKRRLQASFVEV 217
>At3g02610.1 68416.m00252 acyl-[acyl-carrier-protein] desaturase,
putative / stearoyl-ACP desaturase, putative similar to
Acyl-[acyl-carrier protein] desaturase from Spinacia
oleracea SP|P28645, Cucumis sativus SP|P32061, Ricinus
communis SP|P22337; contains Pfam profile PF03405 Fatty
acid desaturase
Length = 411
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = -1
Query: 759 SFVTLKGSATTSVFVSDITTSLTGRSFAPVTVISIFCTTSIPSKTLPKT 613
S +T+ V VS T+ G SF+P ++ + C + PSKT +T
Sbjct: 7 STITVAMKQNPLVAVSFPRTTCLGSSFSPPRLLRVSCVATNPSKTSEET 55
>At1g04600.1 68414.m00454 myosin, putative similar to myosin
(GI:499047) [Arabidopsis thaliana]
Length = 1730
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 8/61 (13%)
Frame = -3
Query: 718 RVRYNNIFDWAIIRTRNS--------HLNFLYNIHSF*NFTENNMSAI*PGCLNSCDEKL 563
++ Y+ +FDW + + NS H+ + +I+ F +F N+ C+N +EKL
Sbjct: 401 KIVYSKLFDWLVTKINNSIGQDPNSKHIIGVLDIYGFESFKTNSFEQF---CINLTNEKL 457
Query: 562 R 560
+
Sbjct: 458 Q 458
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,205,409
Number of Sequences: 28952
Number of extensions: 330387
Number of successful extensions: 799
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 728
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 780
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1775300800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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