Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_D10
(654 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase cyc... 183 1e-46
At3g07370.1 68416.m00879 tetratricopeptide repeat (TPR)-containi... 45 5e-05
At1g61620.1 68414.m06943 expressed protein contains Pfam profile... 44 1e-04
At2g19410.1 68415.m02264 protein kinase family protein contains ... 36 0.024
At4g25160.1 68417.m03622 protein kinase family protein contains ... 29 2.7
At1g50410.1 68414.m05650 SNF2 domain-containing protein / helica... 29 2.7
At5g57035.1 68418.m07119 protein kinase family protein contains ... 28 4.7
At5g37430.1 68418.m04503 hypothetical protein contains Pfam PF04... 28 4.7
At2g45910.1 68415.m05709 protein kinase family protein / U-box d... 28 6.2
At2g28580.1 68415.m03472 hypothetical protein contains Pfam prof... 28 6.2
At5g61550.1 68418.m07724 protein kinase family protein contains ... 27 8.2
At5g24280.1 68418.m02856 expressed protein ; expression supporte... 27 8.2
>At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 595
Score = 183 bits (445), Expect = 1e-46
Identities = 86/165 (52%), Positives = 115/165 (69%)
Frame = +2
Query: 152 MGKRQHQKDKMYLTYTEWTTLYGGKRSGTATEEDTTFKRLPFDHCCLCLQPFDDPYCDAD 331
MGK+QH KD+M++T TEW T +GG +S E T FK LP+ C L PF+DP C D
Sbjct: 1 MGKKQHSKDRMFITKTEWATEWGGAKS---KENRTPFKSLPYYCCALTFLPFEDPVCTID 57
Query: 332 GNVFELQAIIDFRKKFKINPVTGKKLDIKTLIKLNFFKNAEDAYHCPVLFKPFTKNSHIV 511
G+VFE+ I+ + +KF +PVTG L + LI L F KN+E YHCPVL K FT+ +HIV
Sbjct: 58 GSVFEITTIVPYIRKFGKHPVTGAPLKGEDLIPLIFHKNSEGEYHCPVLNKVFTEFTHIV 117
Query: 512 AIRTSGNVYSYEAVEQLNIKGKNWXDLVDDTPFAARNDIITIQXP 646
A++T+GNV+ YEA+++LNIK KNW +L+ + PF R D+ITIQ P
Sbjct: 118 AVKTTGNVFCYEAIKELNIKTKNWKELLTEEPF-TRADLITIQNP 161
>At3g07370.1 68416.m00879 tetratricopeptide repeat (TPR)-containing
protein / U-box domain-containing protein similar to
serologically defined colon cancer antigen 7 GB:5031963
GI:3170178 [Homo sapiens];
Length = 278
Score = 44.8 bits (101), Expect = 5e-05
Identities = 32/110 (29%), Positives = 49/110 (44%), Gaps = 2/110 (1%)
Frame = +2
Query: 140 KTLKMGKRQHQKDKMYLTYTEWTTLYGGKRSGTATEEDTTFKRLPFDHCC-LCLQPFDDP 316
+ L M + + D+ Y +TE A E+ T +P CC + L+ F DP
Sbjct: 159 RALDMSRTEESSDEAYTAHTERLKALERVFKKAAEEDKPT--EVPDYLCCNITLEIFRDP 216
Query: 317 YCDADGNVFELQAIIDFRKKF-KINPVTGKKLDIKTLIKLNFFKNAEDAY 463
G +E AI++ KK K +P+T +K+D L+ K A AY
Sbjct: 217 VISPSGVTYERAAILEHLKKVGKFDPITREKIDPANLVPNLAIKEAVAAY 266
>At1g61620.1 68414.m06943 expressed protein contains Pfam profile:
PF01363 FYVE zinc finger
Length = 310
Score = 43.6 bits (98), Expect = 1e-04
Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +2
Query: 164 QHQKDKMYLTYTEWTTL-YGGKRSGTATEEDTTFKRLPFDHCCLCLQPFDDPYCDADGNV 340
++ D Y TY E L YG +R + + K PFD C LCL+PF DP C G+V
Sbjct: 7 KNNNDLAYFTYDEKKKLGYGTQRERLGRD---SIK--PFDACSLCLKPFIDPMCCHKGHV 61
Query: 341 FELQAIID 364
F + I++
Sbjct: 62 FCRECILE 69
>At2g19410.1 68415.m02264 protein kinase family protein contains
Pfam profile: PF00069 Eukaryotic protein kinase domain
Length = 801
Score = 35.9 bits (79), Expect = 0.024
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +2
Query: 266 RLPFDHCCLCLQPF-DDPYCDADGNVFELQAIIDFRKKFKINPVTGKKLD 412
R P + C L+ ++P ADG +E +AI+ + +K I+PVT +KLD
Sbjct: 724 RAPSHYFCPILREIMEEPEIAADGFTYERKAILAWLEKHNISPVTRQKLD 773
>At4g25160.1 68417.m03622 protein kinase family protein contains
Pfam profile: PF00069 Eukaryotic protein kinase domain
Length = 835
Score = 29.1 bits (62), Expect = 2.7
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +2
Query: 230 SGTATEEDTTFKRLPFDHCCLCLQPFDDPYCDADGNVFELQAIIDFRKKFKINPVTGKKL 409
SG +T+ T F C L ++P ADG ++ AI ++ K+ +P+T L
Sbjct: 760 SGVSTQPPTHFI------CPLLKDVMNEPCVAADGYTYDRHAIEEWLKEHNTSPMTDSPL 813
Query: 410 DIKTLI 427
K L+
Sbjct: 814 HSKNLL 819
>At1g50410.1 68414.m05650 SNF2 domain-containing protein / helicase
domain-containing protein / RING finger
domain-containing protein similar to transcription
factor RUSH-1alpha [Oryctolagus cuniculus] GI:1655930;
contains Pfam profiles PF00271: Helicase conserved
C-terminal domain, PF00176: SNF2 family N-terminal
domain, PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 981
Score = 29.1 bits (62), Expect = 2.7
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +2
Query: 284 CCLCLQPFDDPYCDADGNVFELQAIIDF 367
CC+C P +DP G++F Q + D+
Sbjct: 679 CCVCHDPPEDPVVTLCGHIFCYQCVSDY 706
>At5g57035.1 68418.m07119 protein kinase family protein contains
Pfam profile: PF00069 Eukaryotic protein kinase domain
Length = 786
Score = 28.3 bits (60), Expect = 4.7
Identities = 14/44 (31%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +2
Query: 281 HCCLCLQPFDDPYCDADGNVFELQAIIDFRKKFK-INPVTGKKL 409
+C + + +DP ADG +E +AI ++ +K + ++PVT +L
Sbjct: 710 YCPILKEIMEDPQIAADGFTYERKAIKEWIQKHQDVSPVTKHRL 753
>At5g37430.1 68418.m04503 hypothetical protein contains Pfam PF04510
: Family of unknown function (DUF577)); common family
comprised of At5g37410, At5g37400, At5g37920,
At5g37460, At5g37650, At5g37470, At5g37420, At5g37430
Length = 607
Score = 28.3 bits (60), Expect = 4.7
Identities = 16/69 (23%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +2
Query: 227 RSGTATEEDTTFKRLPFDHCCLCLQPFDDPYCDADGNVFELQAIIDF-RKKFKINPVTGK 403
R A++ +T F+R + CL +Q DD + D + + +I + ++ ++ V
Sbjct: 421 RDYVASQSETEFQRAVYVFQCLTMQLIDDGFLDPEIAHKMIDSIRELVEREMEVGIVRRA 480
Query: 404 KLDIKTLIK 430
D++T++K
Sbjct: 481 FRDVETIVK 489
>At2g45910.1 68415.m05709 protein kinase family protein / U-box
domain-containing protein contains Pfam profiles PF00069
Eukaryotic protein kinase domain, PF04564: U-box
domain; supported by tandem duplication of (GI:3386604)
(TIGR_Ath1:At2g45920) [Arabidopsis thaliana]
Length = 834
Score = 27.9 bits (59), Expect = 6.2
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +2
Query: 272 PFDHCCLCLQPFDDPYCDADGNVFELQAIIDF-RKKFKINPVTGKKLDIKTLIKLNFFKN 448
P+ C + + DP+ ADG +E +AI + + +P+T KL +LI + ++
Sbjct: 765 PYFICPIFQEVMQDPHVAADGFTYEAEAIRAWLDSEHDTSPMTNVKLSHTSLIANHALRS 824
Query: 449 A 451
A
Sbjct: 825 A 825
>At2g28580.1 68415.m03472 hypothetical protein contains Pfam profile
PF03140: Plant protein of unknown function
Length = 468
Score = 27.9 bits (59), Expect = 6.2
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -1
Query: 465 W*ASSAFLKKFNFIRVFISSFFPVTGLILNFFRKSMIACNSNTLPSAS 322
W + F++ VFI FF TG LNF +K I N + L +A+
Sbjct: 136 WINTKDFVEMILHDSVFILLFFIQTGSTLNFNKKEDILFNQSRLINAT 183
>At5g61550.1 68418.m07724 protein kinase family protein contains
Pfam profile: PF00069 Eukaryotic protein kinase domain;
protein kinase 1, PnPK1, Populus nigra, EMBL:AB041503
Length = 845
Score = 27.5 bits (58), Expect = 8.2
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +2
Query: 284 CCLCLQPFDDPYCDADGNVFELQAIIDFRKKFKINPVTGKKLDIKTLI 427
C L ++P ADG ++ +AI ++ ++ +PVT L K LI
Sbjct: 781 CPLLKGVMNEPCVAADGYTYDREAIEEWLRQKDTSPVTNLPLPNKNLI 828
>At5g24280.1 68418.m02856 expressed protein ; expression supported
by MPSS
Length = 1634
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +2
Query: 209 TLYGGKRSGTATEEDTTFKRLPF 277
TL+GGKR GTA E + K + F
Sbjct: 421 TLFGGKRKGTAQEANARLKFVYF 443
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,174,702
Number of Sequences: 28952
Number of extensions: 234305
Number of successful extensions: 585
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 573
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 583
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1363910256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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