Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_C18
         (653 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g03680.1 68416.m00371 C2 domain-containing protein contains I...    29   2.7  
At5g43690.1 68418.m05340 sulfotransferase family protein similar...    28   6.2  
At2g33640.1 68415.m04124 zinc finger (DHHC type) family protein ...    28   6.2  

>At3g03680.1 68416.m00371 C2 domain-containing protein contains
           INTERPRO:IPR000008 C2 domain
          Length = 1017

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = +3

Query: 522 QKETHLRRVKQKKSGRPRPERAPKKSA-PSGDVVDAPEQSYA 644
           +KET   + ++KK G  + E  PK+ A P     DAP  + A
Sbjct: 168 KKETEAAKTEEKKEGDKKEEEKPKEEAKPDEKKPDAPPDTKA 209


>At5g43690.1 68418.m05340 sulfotransferase family protein similar to
           steroid sulfotransferase 3 [Brassica napus] GI:3420008,
           steroid sulfotransferase 1 [Brassica napus] GI:3420004;
           contains Pfam profile PF00685: Sulfotransferase domain
          Length = 331

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +3

Query: 237 ETLISQXKTQCKPEIKLLLLVSCIYLHNTMNSLNN 341
           +TLIS   T     +KL     C Y HNT+ ++ N
Sbjct: 21  KTLISSLPTYQDSHVKLCKYQGCWYYHNTLQAVIN 55


>At2g33640.1 68415.m04124 zinc finger (DHHC type) family protein
           contains Pfam profile PF01529: DHHC zinc finger domain
          Length = 565

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +2

Query: 485 INEDGTRXLXXTAERNTPSASETKKIW 565
           +NE+ +R     A RN PS+ E+  +W
Sbjct: 459 LNEEESRNAVVAARRNLPSSDESSVVW 485


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,298,813
Number of Sequences: 28952
Number of extensions: 187192
Number of successful extensions: 393
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 381
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 393
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1363910256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)