Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_D18
(619 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g54560.1 68416.m06037 histone H2A.F/Z identical to GI:2407800 181 3e-46
At2g38810.3 68415.m04767 histone H2A, putative strong similarity... 180 5e-46
At2g38810.2 68415.m04766 histone H2A, putative strong similarity... 180 5e-46
At2g38810.1 68415.m04765 histone H2A, putative strong similarity... 180 5e-46
At1g52740.1 68414.m05962 histone H2A, putative similar to histon... 180 5e-46
At4g13570.1 68417.m02114 histone H2A, putative similar to histon... 135 3e-32
At3g20670.1 68416.m02616 histone H2A, putative strong similarity... 123 8e-29
At5g54640.1 68418.m06803 histone H2A identical to histone H2A Ar... 123 1e-28
At4g27230.1 68417.m03910 histone H2A, putative strong similarity... 123 1e-28
At1g51060.1 68414.m05740 histone H2A, putative similar to histon... 122 1e-28
At1g08880.1 68414.m00988 histone H2A, putative Strong similarity... 119 1e-27
At1g54690.1 68414.m06235 histone H2A, putative strong similarity... 119 2e-27
At5g02560.1 68418.m00190 histone H2A, putative similar to histon... 113 7e-26
At5g59870.1 68418.m07507 histone H2A, putative similar to histon... 111 5e-25
At5g27670.1 68418.m03317 histone H2A, putative similar to histon... 110 8e-25
At4g19980.1 68417.m02925 expressed protein ; expression support... 30 1.1
At4g27840.1 68417.m03998 expressed protein 30 1.4
At3g29800.1 68416.m03792 AAA-type ATPase family contains Pfam pr... 30 1.4
At5g12970.1 68418.m01487 C2 domain-containing protein contains I... 29 2.5
At1g28490.1 68414.m03503 syntaxin 61 (SYP61) / osmotic stess-sen... 29 3.3
At3g57880.1 68416.m06452 C2 domain-containing protein contains I... 28 4.3
At3g02650.1 68416.m00256 pentatricopeptide (PPR) repeat-containi... 28 4.3
At1g51570.1 68414.m05804 C2 domain-containing protein contains I... 28 4.3
At5g16660.1 68418.m01950 expressed protein 28 5.7
At5g20630.1 68418.m02450 germin-like protein (GER3) identical to... 27 7.5
At2g25050.1 68415.m02996 formin homology 2 domain-containing pro... 27 10.0
>At3g54560.1 68416.m06037 histone H2A.F/Z identical to GI:2407800
Length = 136
Score = 181 bits (441), Expect = 3e-46
Identities = 88/101 (87%), Positives = 94/101 (93%)
Frame = +2
Query: 113 SAXAGLQFPVGSIHRHLKHRXTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVK 292
SA AG+QFPVG IHR LK R ++HGRVGATAAVY+A+ILEYLTAEVLELAGNASKDLKVK
Sbjct: 32 SARAGIQFPVGRIHRQLKTRVSAHGRVGATAAVYTASILEYLTAEVLELAGNASKDLKVK 91
Query: 293 RITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGK 415
RITPRHLQLAIRGDEELD+LIK TIAGGGVIPHIHKSLI K
Sbjct: 92 RITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK 132
>At2g38810.3 68415.m04767 histone H2A, putative strong similarity to
histone H2A.F/Z Arabidopsis thaliana GI:2407800;
contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4
Length = 136
Score = 180 bits (439), Expect = 5e-46
Identities = 86/101 (85%), Positives = 94/101 (93%)
Frame = +2
Query: 113 SAXAGLQFPVGSIHRHLKHRXTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVK 292
S+ AG+QFPVG IHR LK R ++HGRVGATAAVY+A+ILEYLTAEVLELAGNASKDLKVK
Sbjct: 32 SSRAGIQFPVGRIHRQLKQRVSAHGRVGATAAVYTASILEYLTAEVLELAGNASKDLKVK 91
Query: 293 RITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGK 415
RITPRHLQLAIRGDEELD+LIK TIAGGGVIPHIHKSL+ K
Sbjct: 92 RITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLVNK 132
>At2g38810.2 68415.m04766 histone H2A, putative strong similarity to
histone H2A.F/Z Arabidopsis thaliana GI:2407800;
contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4
Length = 136
Score = 180 bits (439), Expect = 5e-46
Identities = 86/101 (85%), Positives = 94/101 (93%)
Frame = +2
Query: 113 SAXAGLQFPVGSIHRHLKHRXTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVK 292
S+ AG+QFPVG IHR LK R ++HGRVGATAAVY+A+ILEYLTAEVLELAGNASKDLKVK
Sbjct: 32 SSRAGIQFPVGRIHRQLKQRVSAHGRVGATAAVYTASILEYLTAEVLELAGNASKDLKVK 91
Query: 293 RITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGK 415
RITPRHLQLAIRGDEELD+LIK TIAGGGVIPHIHKSL+ K
Sbjct: 92 RITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLVNK 132
>At2g38810.1 68415.m04765 histone H2A, putative strong similarity to
histone H2A.F/Z Arabidopsis thaliana GI:2407800;
contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4
Length = 136
Score = 180 bits (439), Expect = 5e-46
Identities = 86/101 (85%), Positives = 94/101 (93%)
Frame = +2
Query: 113 SAXAGLQFPVGSIHRHLKHRXTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVK 292
S+ AG+QFPVG IHR LK R ++HGRVGATAAVY+A+ILEYLTAEVLELAGNASKDLKVK
Sbjct: 32 SSRAGIQFPVGRIHRQLKQRVSAHGRVGATAAVYTASILEYLTAEVLELAGNASKDLKVK 91
Query: 293 RITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGK 415
RITPRHLQLAIRGDEELD+LIK TIAGGGVIPHIHKSL+ K
Sbjct: 92 RITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLVNK 132
>At1g52740.1 68414.m05962 histone H2A, putative similar to histone
H2A.F/Z Arabidopsis thaliana GI:2407800; contains Pfam
profile PF00125 Core histone H2A/H2B/H3/H4
Length = 134
Score = 180 bits (439), Expect = 5e-46
Identities = 88/101 (87%), Positives = 94/101 (93%)
Frame = +2
Query: 113 SAXAGLQFPVGSIHRHLKHRXTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVK 292
S+ AGLQFPVG +HR LK R T+HGRVGATAAVY+AAILEYLTAEVLELAGNASKDLKVK
Sbjct: 30 SSRAGLQFPVGRVHRLLKTRSTAHGRVGATAAVYTAAILEYLTAEVLELAGNASKDLKVK 89
Query: 293 RITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGK 415
RI+PRHLQLAIRGDEELD+LIK TIAGGGVIPHIHKSLI K
Sbjct: 90 RISPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK 130
>At4g13570.1 68417.m02114 histone H2A, putative similar to histone
H2A.F/Z from Arabidopsis thaliana GI:2407800, histone
H2A.F/Z Strongylocentrotus purpuratus SP|P08991, histone
H2A variant Drosophila melanogaster SP|P08985; contains
Pfam profile PF00125 Core histone H2A/H2B/H3/H4
Length = 118
Score = 135 bits (326), Expect = 3e-32
Identities = 65/91 (71%), Positives = 72/91 (79%)
Frame = +2
Query: 125 GLQFPVGSIHRHLKHRXTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 304
G F V IH+ LK+R ++H VGAT VY +ILEYLT EVL+LA N SKDLKVKRITP
Sbjct: 28 GEMFQVARIHKQLKNRVSAHSSVGATDVVYMTSILEYLTTEVLQLAENTSKDLKVKRITP 87
Query: 305 RHLQLAIRGDEELDSLIKATIAGGGVIPHIH 397
RHLQLAIRGDEELD+LIK TI GG VIPHIH
Sbjct: 88 RHLQLAIRGDEELDTLIKGTIIGGSVIPHIH 118
>At3g20670.1 68416.m02616 histone H2A, putative strong similarity to
histone H2A GB:AAF64418 GI:7595337 from Arabidopsis
thaliana, Triticum aestivum GI:536892; contains Pfam
profile PF00125 Core histone H2A/H2B/H3/H4
Length = 132
Score = 123 bits (297), Expect = 8e-29
Identities = 66/109 (60%), Positives = 78/109 (71%), Gaps = 1/109 (0%)
Frame = +2
Query: 113 SAXAGLQFPVGSIHRHLKHRXTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVK 292
S+ AGLQFPVG I R LK+ + RVGA A VY AA+LEYL AEVLELAGNA++D K
Sbjct: 20 SSKAGLQFPVGRIARFLKNGKYAT-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKT 78
Query: 293 RITPRHLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLIGKKGGPGAP 436
RI PRH+QLA+R DEEL L+ TIA GGV+P+IH L+ KK G P
Sbjct: 79 RIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHSLLLPKKAGASKP 127
>At5g54640.1 68418.m06803 histone H2A identical to histone H2A
Arabidopsis thaliana GI:7595337
Length = 130
Score = 123 bits (296), Expect = 1e-28
Identities = 66/109 (60%), Positives = 77/109 (70%), Gaps = 1/109 (0%)
Frame = +2
Query: 113 SAXAGLQFPVGSIHRHLKHRXTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVK 292
S+ AGLQFPVG I R LK + RVGA A VY AA+LEYL AEVLELAGNA++D K
Sbjct: 20 SSKAGLQFPVGRIARFLKAGKYAE-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKT 78
Query: 293 RITPRHLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLIGKKGGPGAP 436
RI PRH+QLA+R DEEL L+ TIA GGV+P+IH L+ KK G P
Sbjct: 79 RIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGASKP 127
>At4g27230.1 68417.m03910 histone H2A, putative strong similarity to
histone H2A Arabidopsis thaliana GI:7595337, Triticum
aestivum GI:536892, Picea abies SP|P35063; contains Pfam
profile PF00125 Core histone H2A/H2B/H3/H4
Length = 131
Score = 123 bits (296), Expect = 1e-28
Identities = 66/109 (60%), Positives = 77/109 (70%), Gaps = 1/109 (0%)
Frame = +2
Query: 113 SAXAGLQFPVGSIHRHLKHRXTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVK 292
S+ AGLQFPVG I R LK + RVGA A VY AA+LEYL AEVLELAGNA++D K
Sbjct: 20 SSKAGLQFPVGRIARFLKAGKYAE-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKT 78
Query: 293 RITPRHLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLIGKKGGPGAP 436
RI PRH+QLA+R DEEL L+ TIA GGV+P+IH L+ KK G P
Sbjct: 79 RIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGSSKP 127
>At1g51060.1 68414.m05740 histone H2A, putative similar to histone
H2A GI:7595337 from Arabidopsis thaliana, Triticum
aestivum GI:536892, Picea abies SP|P35063; contains Pfam
profile PF00125 Core histone H2A/H2B/H3/H4
Length = 132
Score = 122 bits (295), Expect = 1e-28
Identities = 66/109 (60%), Positives = 77/109 (70%), Gaps = 1/109 (0%)
Frame = +2
Query: 113 SAXAGLQFPVGSIHRHLKHRXTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVK 292
S+ AGLQFPVG I R LK + RVGA A VY AA+LEYL AEVLELAGNA++D K
Sbjct: 20 SSKAGLQFPVGRIARFLKKGKYAE-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKT 78
Query: 293 RITPRHLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLIGKKGGPGAP 436
RI PRH+QLA+R DEEL L+ TIA GGV+P+IH L+ KK G P
Sbjct: 79 RIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKTGASKP 127
>At1g08880.1 68414.m00988 histone H2A, putative Strong similarity to
histone H2A Cicer arietinum SP|O65759, Picea abies
SP|P35063; contains Pfam profile PF00125 Core histone
H2A/H2B/H3/H4; ESTs gb|ATTS3874,gb|T46627,gb|T14194 come
from this gene
Length = 142
Score = 119 bits (287), Expect = 1e-27
Identities = 63/105 (60%), Positives = 77/105 (73%), Gaps = 1/105 (0%)
Frame = +2
Query: 113 SAXAGLQFPVGSIHRHLKHRXTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVK 292
S+ AGLQFPVG I R LK + RVGA A VY +A+LEYL AEVLELAGNA++D K
Sbjct: 26 SSKAGLQFPVGRIARFLKSGKYAE-RVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKT 84
Query: 293 RITPRHLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLIGKKGG 424
RI PRH+QLA+R DEEL L+ TIA GGV+P+IH++L+ K G
Sbjct: 85 RIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPSKVG 129
>At1g54690.1 68414.m06235 histone H2A, putative strong similarity to
histone H2A GI:3204129 SP|O65759 from Cicer arietinum,
Picea abies SP|P35063; contains Pfam profile PF00125
Core histone H2A/H2B/H3/H4
Length = 142
Score = 119 bits (286), Expect = 2e-27
Identities = 63/105 (60%), Positives = 77/105 (73%), Gaps = 1/105 (0%)
Frame = +2
Query: 113 SAXAGLQFPVGSIHRHLKHRXTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVK 292
S+ AGLQFPVG I R LK + RVGA A VY +A+LEYL AEVLELAGNA++D K
Sbjct: 26 SSKAGLQFPVGRIARFLKAGKYAE-RVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKT 84
Query: 293 RITPRHLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLIGKKGG 424
RI PRH+QLA+R DEEL L+ TIA GGV+P+IH++L+ K G
Sbjct: 85 RIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPSKVG 129
>At5g02560.1 68418.m00190 histone H2A, putative similar to histone
H2A from Pisum sativum SP|P25470, Zea mays SP|P40280,
Petroselinum crispum SP|P19177; contains Pfam profile
PF00125 Core histone H2A/H2B/H3/H4
Length = 153
Score = 113 bits (273), Expect = 7e-26
Identities = 63/108 (58%), Positives = 76/108 (70%), Gaps = 1/108 (0%)
Frame = +2
Query: 113 SAXAGLQFPVGSIHRHLKHRXTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVK 292
S +GLQFPVG I R+LK S RVG A VY AA+LEYL AEVLELAGNA++D K
Sbjct: 28 SVKSGLQFPVGRIGRYLKKGRYSK-RVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKN 86
Query: 293 RITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKKGGPGA 433
RI PRH+ LA+R DEEL +L+K TIA GGV+P+I+ L+ KK A
Sbjct: 87 RIIPRHVLLAVRNDEELGTLLKGVTIAHGGVLPNINPILLPKKSEKAA 134
>At5g59870.1 68418.m07507 histone H2A, putative similar to histone
H2A Petroselinum crispum SP|P19177, Lycopersicon
esculentum SP|P25469, Zea mays SP|P40280; contains Pfam
profile PF00125 Core histone H2A/H2B/H3/H4
Length = 150
Score = 111 bits (266), Expect = 5e-25
Identities = 62/103 (60%), Positives = 72/103 (69%), Gaps = 1/103 (0%)
Frame = +2
Query: 113 SAXAGLQFPVGSIHRHLKHRXTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVK 292
S AGLQFPVG I R LK + R+G A VY AA+LEYL AEVLELAGNA++D K
Sbjct: 28 SMKAGLQFPVGRITRFLKKGRYAQ-RLGGGAPVYMAAVLEYLAAEVLELAGNAARDNKKS 86
Query: 293 RITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKK 418
RI PRHL LAIR DEEL L+ TIA GGV+P+I+ L+ KK
Sbjct: 87 RIIPRHLLLAIRNDEELGKLLSGVTIAHGGVLPNINSVLLPKK 129
>At5g27670.1 68418.m03317 histone H2A, putative similar to histone
H2A Lycopersicon esculentum SP|P25469, Pisum sativum
SP|P25470, Petroselinum crispum SP|P19177; contains Pfam
profile PF00125 Core histone H2A/H2B/H3/H4
Length = 150
Score = 110 bits (264), Expect = 8e-25
Identities = 62/103 (60%), Positives = 73/103 (70%), Gaps = 1/103 (0%)
Frame = +2
Query: 113 SAXAGLQFPVGSIHRHLKHRXTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVK 292
S AGLQFPVG I R+LK + R G+ A VY AA+LEYL AEVLELAGNA++D K
Sbjct: 29 SVKAGLQFPVGRIARYLKKGRYAL-RYGSGAPVYLAAVLEYLAAEVLELAGNAARDNKKN 87
Query: 293 RITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKK 418
RI PRHL LAIR DEEL L+ TIA GGV+P+I+ L+ KK
Sbjct: 88 RINPRHLCLAIRNDEELGRLLHGVTIASGGVLPNINPVLLPKK 130
>At4g19980.1 68417.m02925 expressed protein ; expression supported
by MPSS
Length = 127
Score = 30.3 bits (65), Expect = 1.1
Identities = 18/36 (50%), Positives = 19/36 (52%)
Frame = +1
Query: 193 RSYGSSLFCRYFGISYSRGFGVGGKCV*RFKSEAYY 300
R GSSL CRY +SYS F GG C E YY
Sbjct: 57 RRQGSSLQCRYDPMSYSLNFD-GGACGTLPDDEDYY 91
>At4g27840.1 68417.m03998 expressed protein
Length = 260
Score = 29.9 bits (64), Expect = 1.4
Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = +2
Query: 227 LEYLTAEVLELAGNASKDLKVKRITPRHLQLAIR-GDEELDSLIKATIAGGGVIPHIHKS 403
L+ + AE+ + GN +KDL+++ +PR + I+ ++ LDS GG ++P + K
Sbjct: 117 LDPVFAEIAAIGGNHNKDLELEFGSPRSIAREIKSNNQSLDS--SKGRKGGALMPLLGKP 174
Query: 404 L 406
L
Sbjct: 175 L 175
>At3g29800.1 68416.m03792 AAA-type ATPase family contains Pfam
profile: ATPase family PF00004
Length = 440
Score = 29.9 bits (64), Expect = 1.4
Identities = 18/72 (25%), Positives = 31/72 (43%)
Frame = +2
Query: 149 IHRHLKHRXTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIR 328
+ RH HG GA AAI +YL +V + D +R+ R +I
Sbjct: 194 VGRHWMRYYLLHGLPGAGKTSLVAAIAKYLNFDVYNITQGVKTDFDTRRLIRRVEDSSIL 253
Query: 329 GDEELDSLIKAT 364
E++D+ ++ +
Sbjct: 254 LVEDIDTSLEGS 265
>At5g12970.1 68418.m01487 C2 domain-containing protein contains
INTERPRO:IPR000008 C2 domain
Length = 769
Score = 29.1 bits (62), Expect = 2.5
Identities = 11/18 (61%), Positives = 14/18 (77%), Gaps = 2/18 (11%)
Frame = +1
Query: 361 NYRWRRRHPTH--TQISH 408
N+RWR RHP H T++SH
Sbjct: 628 NFRWRPRHPPHMDTRLSH 645
>At1g28490.1 68414.m03503 syntaxin 61 (SYP61) / osmotic
stess-sensitive mutant 1 (OSM1) identical to SP|Q946Y7
Syntaxin 61 (AtSYP61) (Osmotic stess-sensitive mutant 1)
{Arabidopsis thaliana}; identical to cDNA syntaxin of
plants 61 (SYP61) GI:16041649
Length = 245
Score = 28.7 bits (61), Expect = 3.3
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +2
Query: 263 GNASKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGKK 418
G D V+ + R + L + DEELD L K+ GGV IH L+ ++
Sbjct: 137 GGRDDDGFVQSESDRQMLLIKQQDEELDELSKSVQRIGGVGLTIHDELVAQE 188
>At3g57880.1 68416.m06452 C2 domain-containing protein contains
INTERPRO:IPR000008 C2 domain
Length = 773
Score = 28.3 bits (60), Expect = 4.3
Identities = 11/17 (64%), Positives = 13/17 (76%), Gaps = 2/17 (11%)
Frame = +1
Query: 364 YRWRRRHPTH--TQISH 408
YRWR RHP H T++SH
Sbjct: 633 YRWRPRHPPHMDTRLSH 649
>At3g02650.1 68416.m00256 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 1077
Score = 28.3 bits (60), Expect = 4.3
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Frame = +2
Query: 188 RVGATAAVY---SAAILEYLTAEVLELAGNASKDLKVKRITPRHLQ 316
++G VY S IL +L A +L ++ NAS++L V RI+ + Q
Sbjct: 483 KIGRLVEVYVYGSWQILAFLAAVLLLISQNASRNLAVTRISKKKTQ 528
>At1g51570.1 68414.m05804 C2 domain-containing protein contains
INTERPRO:IPR000008 C2 domain
Length = 776
Score = 28.3 bits (60), Expect = 4.3
Identities = 11/17 (64%), Positives = 13/17 (76%), Gaps = 2/17 (11%)
Frame = +1
Query: 364 YRWRRRHPTH--TQISH 408
YRWR RHP H T++SH
Sbjct: 636 YRWRPRHPPHMDTRLSH 652
>At5g16660.1 68418.m01950 expressed protein
Length = 168
Score = 27.9 bits (59), Expect = 5.7
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -1
Query: 508 LCRCVTTAGIKCSIILSSHNLKLNGCTRTAFLSN 407
+ C+ TA + S + SH +K NG + T LS+
Sbjct: 1 MASCIATAPLSLSGVSQSHYVKANGLSTTTKLSS 34
>At5g20630.1 68418.m02450 germin-like protein (GER3) identical to
germin-like protein subfamily 3 member 3 [SP|P94072]
Length = 211
Score = 27.5 bits (58), Expect = 7.5
Identities = 22/51 (43%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +2
Query: 251 LELAGNASKDLKVKRITPRHLQLAIRGDEELD-SLIKATIAGGGVIP-HIH 397
L AGN S +K +TP A G L SL + +AGGGVIP H H
Sbjct: 57 LGTAGNTSNIIKAA-VTPAFAP-AYAGINGLGVSLARLDLAGGGVIPLHTH 105
>At2g25050.1 68415.m02996 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02128
Length = 1111
Score = 27.1 bits (57), Expect = 10.0
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = -2
Query: 438 TGAPGPPFFPMRDLCMCGMTPPPAIVAFMRLSNSSSPLIASCKCRG 301
T +P PP P+R L PPP ++ +R + S S S +G
Sbjct: 555 TSSPLPPLKPLRILSRPPPPPPPPPISSLRSTPSPSSTSNSIATQG 600
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,200,988
Number of Sequences: 28952
Number of extensions: 243915
Number of successful extensions: 571
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 538
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 553
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1246162608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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