Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_C09
(786 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g08065.1 68414.m00882 carbonic anhydrase family protein simil... 71 7e-13
At1g08080.1 68414.m00884 carbonic anhydrase family protein simil... 67 1e-11
At2g28210.1 68415.m03425 carbonic anhydrase family protein simil... 60 2e-09
At4g20990.1 68417.m03038 carbonic anhydrase family protein simil... 53 2e-07
At5g04180.1 68418.m00406 carbonic anhydrase family protein simil... 49 3e-06
At4g21000.1 68417.m03039 carbonic anhydrase family protein simil... 46 3e-05
At3g52720.2 68416.m05809 carbonic anhydrase family protein low s... 45 7e-05
At3g52720.1 68416.m05808 carbonic anhydrase family protein low s... 45 7e-05
At5g56330.1 68418.m07031 carbonic anhydrase family protein conta... 40 0.001
At2g43710.1 68415.m05433 acyl-[acyl-carrier-protein] desaturase ... 33 0.28
At2g43710.2 68415.m05434 acyl-[acyl-carrier-protein] desaturase ... 32 0.38
At1g53280.1 68414.m06038 DJ-1 family protein similar to DJ-1 pro... 29 4.6
At1g51570.1 68414.m05804 C2 domain-containing protein contains I... 29 4.6
At3g56980.1 68416.m06342 basic helix-loop-helix (bHLH) family pr... 28 6.1
At1g17160.1 68414.m02092 pfkB-type carbohydrate kinase family pr... 28 6.1
At2g29880.1 68415.m03628 hypothetical protein 28 8.1
At2g28450.1 68415.m03456 zinc finger (CCCH-type) family protein ... 28 8.1
>At1g08065.1 68414.m00882 carbonic anhydrase family protein similar
to storage protein (dioscorin) [Dioscorea cayenensis]
GI:433463; contains Pfam profile PF00194:
Eukaryotic-type carbonic anhydrase
Length = 263
Score = 71.3 bits (167), Expect = 7e-13
Identities = 64/217 (29%), Positives = 99/217 (45%), Gaps = 8/217 (3%)
Frame = +1
Query: 157 WAVLHPA---CG-GRQQSPIAISARQAIPISIPAIELIGYQNP--LPGPLTITNTGHSVA 318
W L P CG G QSPI ++ ++ + +GY LP TI N GH +
Sbjct: 34 WGRLKPEWAMCGKGNMQSPIDLTDKRVL-----IDHNLGYLRSQYLPSNATIKNRGHDIM 88
Query: 319 LTIPKYTSEEEKKGFRLPYIFGGPLDNEYEIDGLHFHWGDKNNRGSEHTLNDMRLPLEMH 498
+ K+ G + EY++ +H+H SEHTLN R LE H
Sbjct: 89 M---KFEGGNAGLGITIN-------GTEYKLQQIHWH------SPSEHTLNGKRFVLEEH 132
Query: 499 IIHRNKKYRNTAEAMQHPDGLCVLAFFYQVVEFDAKLLS--PIVKNLTAIENFNSTLQLP 672
++H++K RN V+AFFY++ + D LL+ +K +T +++
Sbjct: 133 MVHQSKDGRNA-----------VVAFFYKLGKPDYFLLTLERYLKRITDTHESQEFVEMV 181
Query: 673 HTFSLSSILSGLDTERFYTYKGSLTTPPCAEXVTWVI 783
H + G +++ +Y + GSLTTPPC+E V W I
Sbjct: 182 HPRTF-----GFESKHYYRFIGSLTTPPCSENVIWTI 213
>At1g08080.1 68414.m00884 carbonic anhydrase family protein similar
to storage protein (dioscorin) [Dioscorea cayenensis]
GI:433463; contains Pfam profile PF00194:
Eukaryotic-type carbonic anhydrase
Length = 275
Score = 67.3 bits (157), Expect = 1e-11
Identities = 66/254 (25%), Positives = 106/254 (41%), Gaps = 15/254 (5%)
Frame = +1
Query: 67 YFGIIAVFTLVVINVSVAAG--------WGYRASDQR---RWAVLHPA---CG-GRQQSP 201
+ + ++FT+V I+ + ++ + Y+ +D++ RW L P CG G QSP
Sbjct: 12 FVALFSIFTIVSISSAASSHGEVEDEREFNYKKNDEKGPERWGELKPEWEMCGKGEMQSP 71
Query: 202 IAISARQAIPISIPAIELIGYQNPLPGPLTITNTGHSVALTIPKYTSEEEKKGFRLPYIF 381
I + + +S Y P T+ N GH + L + GF
Sbjct: 72 IDLMNERVNIVSHLGRLNRDYN---PSNATLKNRGHDIMLKFEDGAGTIKINGF------ 122
Query: 382 GGPLDNEYEIDGLHFHWGDKNNRGSEHTLNDMRLPLEMHIIHRNKKYRNTAEAMQHPDGL 561
EYE+ LH+H SEHT+N R LE+H++H + R +
Sbjct: 123 ------EYELQQLHWH------SPSEHTINGRRFALELHMVHEGRNRR-----------M 159
Query: 562 CVLAFFYQVVEFDAKLLSPIVKNLTAIENFNSTLQLPHTFSLSSILSGLDTERFYTYKGS 741
V+ Y++ D + S + K L I + + I G + ++Y Y GS
Sbjct: 160 AVVTVLYKIGRADTFIRS-LEKELEGIAEMEEAEKNVGMIDPTKIKIG--SRKYYRYTGS 216
Query: 742 LTTPPCAEXVTWVI 783
LTTPPC + VTW +
Sbjct: 217 LTTPPCTQNVTWSV 230
>At2g28210.1 68415.m03425 carbonic anhydrase family protein similar
to storage protein (dioscorin) [Dioscorea cayenensis]
GI:433463; contains Pfam profile PF00194:
Eukaryotic-type carbonic anhydrase
Length = 217
Score = 59.7 bits (138), Expect = 2e-09
Identities = 61/214 (28%), Positives = 90/214 (42%), Gaps = 4/214 (1%)
Frame = +1
Query: 154 RWAVLHPA---CG-GRQQSPIAISARQAIPISIPAIELIGYQNPLPGPLTITNTGHSVAL 321
+W L P CG G QSPI + ++ + + +L + P T+ N GH + L
Sbjct: 23 KWGKLRPEWKMCGKGEMQSPIDLMNKR-VRLVTHLKKLTRHYKPCNA--TLKNRGHDMML 79
Query: 322 TIPKYTSEEEKKGFRLPYIFGGPLDNEYEIDGLHFHWGDKNNRGSEHTLNDMRLPLEMHI 501
EE G G EY++ LH+H SEHT+N R LE+H+
Sbjct: 80 KFG-----EEGSG---SITVNG---TEYKLLQLHWH------SPSEHTMNGRRFALELHM 122
Query: 502 IHRNKKYRNTAEAMQHPDGLCVLAFFYQVVEFDAKLLSPIVKNLTAIENFNSTLQLPHTF 681
+H N L V+ Y++ D+ L + L+AI + N +
Sbjct: 123 VHENIN-----------GSLAVVTVLYKIGRPDS-FLGLLENKLSAITDQNEAEKYVDVI 170
Query: 682 SLSSILSGLDTERFYTYKGSLTTPPCAEXVTWVI 783
I G + +FY Y GSLTTPPC + V W +
Sbjct: 171 DPRDIKIG--SRKFYRYIGSLTTPPCTQNVIWTV 202
>At4g20990.1 68417.m03038 carbonic anhydrase family protein similar
to storage protein (dioscorin) [Dioscorea cayenensis]
GI:433463; contains Pfam profile PF00194:
Eukaryotic-type carbonic anhydrase
Length = 267
Score = 53.2 bits (122), Expect = 2e-07
Identities = 54/213 (25%), Positives = 90/213 (42%), Gaps = 4/213 (1%)
Frame = +1
Query: 157 WAVLHP---ACG-GRQQSPIAISARQAIPISIPAIELIGYQNPLPGPLTITNTGHSVALT 324
W ++P C GR QSPI ++ + I A + P P ITN GH + ++
Sbjct: 49 WGKINPHWKVCNTGRYQSPIDLTNERVSLIHDQAWT----RQYKPAPAVITNRGHDIMVS 104
Query: 325 IPKYTSEEEKKGFRLPYIFGGPLDNEYEIDGLHFHWGDKNNRGSEHTLNDMRLPLEMHII 504
+ + K R + + + + HW + SEHT+N R LE+H++
Sbjct: 105 ---WKGDAGKMTIR-----------KTDFNLVQCHW----HSPSEHTVNGTRYDLELHMV 146
Query: 505 HRNKKYRNTAEAMQHPDGLCVLAFFYQVVEFDAKLLSPIVKNLTAIENFNSTLQLPHTFS 684
H + + R V+ Y++ E + + L+ ++ + A+ N L +
Sbjct: 147 HTSARGRTA-----------VIGVLYKLGEPN-EFLTKLLNGIKAVGNKEINLGMIDPRE 194
Query: 685 LSSILSGLDTERFYTYKGSLTTPPCAEXVTWVI 783
+ T +FY Y GSLT PPC E V W +
Sbjct: 195 IR-----FQTRKFYRYIGSLTVPPCTEGVIWTV 222
>At5g04180.1 68418.m00406 carbonic anhydrase family protein similar
to storage protein (dioscorin) [Dioscorea cayenensis]
GI:433463; contains Pfam profile PF00194:
Eukaryotic-type carbonic anhydrase
Length = 277
Score = 49.2 bits (112), Expect = 3e-06
Identities = 37/130 (28%), Positives = 62/130 (47%)
Frame = +1
Query: 394 DNEYEIDGLHFHWGDKNNRGSEHTLNDMRLPLEMHIIHRNKKYRNTAEAMQHPDGLCVLA 573
D +Y++ H+H SEH L+ RL +E+H++H++ + + +G A
Sbjct: 108 DTDYKLVQSHWH------APSEHFLDGQRLAMELHMVHKSVEGHLAVIGVLFREGE-PNA 160
Query: 574 FFYQVVEFDAKLLSPIVKNLTAIENFNSTLQLPHTFSLSSILSGLDTERFYTYKGSLTTP 753
F ++++ K+ + + +I + P F G D +FY Y+GSLTTP
Sbjct: 161 FISRIMDKIHKI-ADVQDGEVSIGKID-----PREF-------GWDLTKFYEYRGSLTTP 207
Query: 754 PCAEXVTWVI 783
PC E V W I
Sbjct: 208 PCTEDVMWTI 217
>At4g21000.1 68417.m03039 carbonic anhydrase family protein similar
to storage protein (dioscorin) [Dioscorea cayenensis]
GI:433463; contains Pfam profile PF00194:
Eukaryotic-type carbonic anhydrase
Length = 260
Score = 46.0 bits (104), Expect = 3e-05
Identities = 31/110 (28%), Positives = 49/110 (44%)
Frame = +1
Query: 454 SEHTLNDMRLPLEMHIIHRNKKYRNTAEAMQHPDGLCVLAFFYQVVEFDAKLLSPIVKNL 633
SEHT+N LE+H++H + + T V+ Y++ E D + L+ I+ +
Sbjct: 131 SEHTINGTSYDLELHMVHTSASGKTT-----------VVGVLYKLGEPD-EFLTKILNGI 178
Query: 634 TAIENFNSTLQLPHTFSLSSILSGLDTERFYTYKGSLTTPPCAEXVTWVI 783
+ L + + +T FY Y GSLT PPC E V W +
Sbjct: 179 KGVGKKEIDLGIVDPRDIR-----FETNNFYRYIGSLTIPPCTEGVIWTV 223
>At3g52720.2 68416.m05809 carbonic anhydrase family protein low
similarity to storage protein (dioscorin) [Dioscorea
cayenensis] GI:433463; contains Pfam profile PF00194:
Eukaryotic-type carbonic anhydrase
Length = 230
Score = 44.8 bits (101), Expect = 7e-05
Identities = 37/122 (30%), Positives = 54/122 (44%)
Frame = +1
Query: 418 LHFHWGDKNNRGSEHTLNDMRLPLEMHIIHRNKKYRNTAEAMQHPDGLCVLAFFYQVVEF 597
L HW + SEH L+ ++ E+H++H+ K A G F Q+ E
Sbjct: 116 LQMHW----HTPSEHHLHGVQYAAELHMVHQAKDGSFAVVASLFKIGT-EEPFLSQMKEK 170
Query: 598 DAKLLSPIVKNLTAIENFNSTLQLPHTFSLSSILSGLDTERFYTYKGSLTTPPCAEXVTW 777
KL +K N T Q+ + + T ++Y Y GSLTTPPC+E V+W
Sbjct: 171 LVKLKEERLKG-------NHTAQV-EVGRIDTRHIERKTRKYYRYIGSLTTPPCSENVSW 222
Query: 778 VI 783
I
Sbjct: 223 TI 224
>At3g52720.1 68416.m05808 carbonic anhydrase family protein low
similarity to storage protein (dioscorin) [Dioscorea
cayenensis] GI:433463; contains Pfam profile PF00194:
Eukaryotic-type carbonic anhydrase
Length = 284
Score = 44.8 bits (101), Expect = 7e-05
Identities = 37/122 (30%), Positives = 54/122 (44%)
Frame = +1
Query: 418 LHFHWGDKNNRGSEHTLNDMRLPLEMHIIHRNKKYRNTAEAMQHPDGLCVLAFFYQVVEF 597
L HW + SEH L+ ++ E+H++H+ K A G F Q+ E
Sbjct: 116 LQMHW----HTPSEHHLHGVQYAAELHMVHQAKDGSFAVVASLFKIGT-EEPFLSQMKEK 170
Query: 598 DAKLLSPIVKNLTAIENFNSTLQLPHTFSLSSILSGLDTERFYTYKGSLTTPPCAEXVTW 777
KL +K N T Q+ + + T ++Y Y GSLTTPPC+E V+W
Sbjct: 171 LVKLKEERLKG-------NHTAQV-EVGRIDTRHIERKTRKYYRYIGSLTTPPCSENVSW 222
Query: 778 VI 783
I
Sbjct: 223 TI 224
>At5g56330.1 68418.m07031 carbonic anhydrase family protein contains
proline-rich extensin domains, INTERPRO:IPR002965;
contains Pfam profile PF00194: Eukaryotic-type carbonic
anhydrase
Length = 350
Score = 40.3 bits (90), Expect = 0.001
Identities = 34/117 (29%), Positives = 51/117 (43%), Gaps = 1/117 (0%)
Frame = +1
Query: 178 CG-GRQQSPIAISARQAIPISIPAIELIGYQNPLPGPLTITNTGHSVALTIPKYTSEEEK 354
CG G+ QSPI + + + + + Y LP TI N GH + L K+ +
Sbjct: 163 CGIGKMQSPIDLRDKNVVVSNKFGLLRSQY---LPSNTTIKNRGHDIML---KFKGGNKG 216
Query: 355 KGFRLPYIFGGPLDNEYEIDGLHFHWGDKNNRGSEHTLNDMRLPLEMHIIHRNKKYR 525
G + Y++ LH+H SEHT+N R LE H++H +K R
Sbjct: 217 IGVTIR-------GTRYQLQQLHWH------SPSEHTINGKRFALEEHLVHESKDKR 260
>At2g43710.1 68415.m05433 acyl-[acyl-carrier-protein] desaturase /
stearoyl-ACP desaturase (SSI2) identical to gi:15149310;
contains Pfam profile PF03405: Fatty acid desaturase;
identical to cDNA stearoyl ACP desaturase (SSI2),
SSI2-FAB2 allele, GI:15149309
Length = 401
Score = 32.7 bits (71), Expect = 0.28
Identities = 15/43 (34%), Positives = 27/43 (62%)
Frame = -2
Query: 443 FLSPQWKCRPSISYSLSRGPPKM*GRRKPFFSSSEVYLGIVNA 315
F SP++ C S S +LS GP ++ +KPF EV++ ++++
Sbjct: 27 FRSPKFLCLASSSPALSSGPKEVESLKKPFTPPREVHVQVLHS 69
>At2g43710.2 68415.m05434 acyl-[acyl-carrier-protein] desaturase /
stearoyl-ACP desaturase (SSI2) identical to gi:15149310;
contains Pfam profile PF03405: Fatty acid desaturase;
identical to cDNA stearoyl ACP desaturase (SSI2),
SSI2-FAB2 allele, GI:15149309
Length = 401
Score = 32.3 bits (70), Expect = 0.38
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = -2
Query: 443 FLSPQWKCRPSISYSLSRGPPKM*GRRKPFFSSSEVYLGIVNA 315
F SP++ C S S +LS GP + +KPF EV++ ++++
Sbjct: 27 FRSPKFLCLASSSPALSSGPKSVESLKKPFTPPREVHVQVLHS 69
>At1g53280.1 68414.m06038 DJ-1 family protein similar to DJ-1
protein [Homo sapiens] GI:1780755; similar to DJ-1 beta
(GI:18642508) [Drosophila melanogaster]; contains Pfam
profile: PF01965 ThiJ/PfpI family; TIGRFAM TIGR01383:
DJ-1 family protein
Length = 438
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = -1
Query: 132 SPSCCHRYINNHQGEYSYNTKVLHCY 55
S S CHRY N +NTK LH Y
Sbjct: 3 SSSLCHRYFNKITVTPFFNTKKLHHY 28
>At1g51570.1 68414.m05804 C2 domain-containing protein contains
INTERPRO:IPR000008 C2 domain
Length = 776
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/68 (23%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = +1
Query: 412 DGLHFHWGDKNNRGSEHTLNDMRLPLEMHIIHRNKKYRNTAEAM-QHPDGLCVLAFFYQV 588
D H H GDKNN G + + ++ + + + ++ Y ++ + HP G+ + +
Sbjct: 435 DNCHLHGGDKNNGGGKDS-RIGKVRIRLSTLEADRVYTHSYPLLVLHPSGVKKMGEIHLA 493
Query: 589 VEFDAKLL 612
V F L
Sbjct: 494 VRFTCSSL 501
>At3g56980.1 68416.m06342 basic helix-loop-helix (bHLH) family
protein
Length = 258
Score = 28.3 bits (60), Expect = 6.1
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +1
Query: 673 HTFSLSSILSGLDTERF 723
H FS+S++LSGL+ +RF
Sbjct: 190 HNFSISNVLSGLEEDRF 206
>At1g17160.1 68414.m02092 pfkB-type carbohydrate kinase family
protein contains Pfam profile: PF00294 pfkB family
carbohydrate kinase
Length = 379
Score = 28.3 bits (60), Expect = 6.1
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +3
Query: 585 GCGIRCQALKSYREEPNGHRELQLHSAAAAYFLLV 689
GCG+ ++S EP GH + L S ++V
Sbjct: 145 GCGVHLDYVRSVNNEPTGHAVVMLQSDGQNSIIIV 179
>At2g29880.1 68415.m03628 hypothetical protein
Length = 308
Score = 27.9 bits (59), Expect = 8.1
Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 6/76 (7%)
Frame = +1
Query: 337 TSEEEKKGFRLPYIFGGPLDNE-YE-----IDGLHFHWGDKNNRGSEHTLNDMRLPLEMH 498
TS+++KKG PY+ D E YE +D + W DKN S+ T+ LPL
Sbjct: 10 TSKKKKKG---PYMSWS--DQECYELTAILVDAIKRGWRDKNGTISKTTVERKILPLLNK 64
Query: 499 IIHRNKKYRNTAEAMQ 546
NK Y N M+
Sbjct: 65 KFKCNKTYTNYLSRMK 80
>At2g28450.1 68415.m03456 zinc finger (CCCH-type) family protein
contains Pfam domain, PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar)
Length = 809
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = -1
Query: 681 ESMRQLQSGVEVLDGR 634
E+ QLQSGVE+LDG+
Sbjct: 214 ENAEQLQSGVEILDGK 229
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,971,038
Number of Sequences: 28952
Number of extensions: 406828
Number of successful extensions: 1000
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 962
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 995
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1765546400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -