Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_B12
         (669 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g10170.1 68418.m01177 inositol-3-phosphate synthase, putative...   160   7e-40
At2g22240.1 68415.m02640 inositol-3-phosphate synthase isozyme 2...   159   1e-39
At4g39800.1 68417.m05637 inositol-3-phosphate synthase isozyme 1...   157   8e-39
At2g22240.2 68415.m02639 inositol-3-phosphate synthase isozyme 2...    51   8e-07
At3g10010.1 68416.m01201 HhH-GPD base excision DNA repair family...    30   1.6  
At1g51830.1 68414.m05843 leucine-rich repeat protein kinase, put...    27   8.5  

>At5g10170.1 68418.m01177 inositol-3-phosphate synthase, putative /
           myo-inositol-1-phosphate synthase, putative / MI-1-P
           synthase, putative very strong similarity to SP|Q38862
           Myo-inositol-1-phosphate synthase isozyme 2 (EC 5.5.1.4)
           (MI-1-P synthase 2) (IPS 2) {Arabidopsis thaliana};
           identical to SP|Q9LX12| Probable inositol-3-phosphate
           synthase isozyme 3 (EC 5.5.1.4) (Myo-
           inositol-1-phosphate synthase 3) (MI-1-P synthase 3)
           (IPS 3) {Arabidopsis thaliana}; contains Pfam profile
           PF01658: Myo-inositol-1-phosphate synthase
          Length = 510

 Score =  160 bits (389), Expect = 7e-40
 Identities = 80/157 (50%), Positives = 107/157 (68%), Gaps = 4/157 (2%)
 Frame = +2

Query: 209 IVSPNVKYSDDFIYADYEYNET-LVKKIDN---QLVAQPYSKTLSIRTQRKVGKVGVMLV 376
           + SPNVKY+++ I++ Y+Y  T LV +  N   Q   +P +     +T   V K+GVMLV
Sbjct: 8   VESPNVKYTENEIHSVYDYQTTELVHENKNGAFQWTVKPKTVKYEFKTDTHVPKLGVMLV 67

Query: 377 GWGGNNGSTFTAAVLANRHQLSWNTKNGSLDANWFGSITQASTVRLGLDEKGNDVNVPMN 556
           GWGGNNGST TA V+ANR  +SW TK     AN+FGS+TQAS++R+G    G ++  P  
Sbjct: 68  GWGGNNGSTLTAGVIANREGISWATKEKVQQANYFGSLTQASSIRVG-SFNGEEIYAPFK 126

Query: 557 SLLPMVNPDDLFIDGWDISPLNXAESMARAKVLDYDL 667
           SLLPMVNP+++   GWDIS +N A++MARAKVLD DL
Sbjct: 127 SLLPMVNPEEIVFGGWDISDMNLADAMARAKVLDIDL 163


>At2g22240.1 68415.m02640 inositol-3-phosphate synthase isozyme 2 /
           myo-inositol-1-phosphate synthase 2 / MI-1-P synthase 2
           / IPS 2 identical to SP|Q38862 Myo-inositol-1-phosphate
           synthase isozyme 2 (EC 5.5.1.4) (MI-1-P synthase 2) (IPS
           2) {Arabidopsis thaliana}
          Length = 510

 Score =  159 bits (387), Expect = 1e-39
 Identities = 79/157 (50%), Positives = 109/157 (69%), Gaps = 4/157 (2%)
 Frame = +2

Query: 209 IVSPNVKYSDDFIYADYEYNET-LVKKIDN---QLVAQPYSKTLSIRTQRKVGKVGVMLV 376
           + SPNVKY+++ I + Y+Y  T +V +  N   Q V +P +     +T  +V K+GVMLV
Sbjct: 8   VESPNVKYTENEINSVYDYETTEVVHENRNGTYQWVVKPKTVKYDFKTDTRVPKLGVMLV 67

Query: 377 GWGGNNGSTFTAAVLANRHQLSWNTKNGSLDANWFGSITQASTVRLGLDEKGNDVNVPMN 556
           GWGGNNGST TA V+AN+  +SW TK+    AN+FGS+TQAS++R+G    G ++  P  
Sbjct: 68  GWGGNNGSTLTAGVIANKEGISWATKDKVQQANYFGSLTQASSIRVG-SYNGEEIYAPFK 126

Query: 557 SLLPMVNPDDLFIDGWDISPLNXAESMARAKVLDYDL 667
           SLLPMVNP+D+   GWDIS +N A++MARA+VLD DL
Sbjct: 127 SLLPMVNPEDVVFGGWDISDMNLADAMARARVLDIDL 163


>At4g39800.1 68417.m05637 inositol-3-phosphate synthase isozyme 1 /
           myo-inositol-1-phosphate synthase 1 / MI-1-P synthase 1
           / IPS 1 identical to SP|P42801 Inositol-3-phosphate
           synthase isozyme 1 (EC 5.5.1.4) (Myo-inositol-1-
           phosphate synthase 1) (MI-1-P synthase 1) (IPS 1)
           {Arabidopsis thaliana}
          Length = 511

 Score =  157 bits (380), Expect = 8e-39
 Identities = 79/158 (50%), Positives = 109/158 (68%), Gaps = 5/158 (3%)
 Frame = +2

Query: 209 IVSPNVKYSDDFIYA--DYEYNETLVKKIDN---QLVAQPYSKTLSIRTQRKVGKVGVML 373
           + SPNVKY+++ I++  DYE  E + +K  N   Q + +P +     +T  +V K+GVML
Sbjct: 8   VESPNVKYTENEIHSVYDYETTEVVHEKTVNGTYQWIVKPKTVKYDFKTDIRVPKLGVML 67

Query: 374 VGWGGNNGSTFTAAVLANRHQLSWNTKNGSLDANWFGSITQASTVRLGLDEKGNDVNVPM 553
           VG GGNNGST TA V+AN+  +SW TK+    AN+FGS+TQAS++R+G    G ++  P 
Sbjct: 68  VGLGGNNGSTLTAGVIANKEGISWATKDKVQQANYFGSLTQASSIRVG-SFNGEEIYAPF 126

Query: 554 NSLLPMVNPDDLFIDGWDISPLNXAESMARAKVLDYDL 667
            SLLPMVNPDD+   GWDIS +N A++MARA+VLD DL
Sbjct: 127 KSLLPMVNPDDVVFGGWDISDMNLADAMARARVLDIDL 164


>At2g22240.2 68415.m02639 inositol-3-phosphate synthase isozyme 2 /
           myo-inositol-1-phosphate synthase 2 / MI-1-P synthase 2
           / IPS 2 identical to SP|Q38862 Myo-inositol-1-phosphate
           synthase isozyme 2 (EC 5.5.1.4) (MI-1-P synthase 2) (IPS
           2) {Arabidopsis thaliana}
          Length = 380

 Score = 50.8 bits (116), Expect = 8e-07
 Identities = 21/33 (63%), Positives = 27/33 (81%)
 Frame = +2

Query: 569 MVNPDDLFIDGWDISPLNXAESMARAKVLDYDL 667
           MVNP+D+   GWDIS +N A++MARA+VLD DL
Sbjct: 1   MVNPEDVVFGGWDISDMNLADAMARARVLDIDL 33


>At3g10010.1 68416.m01201 HhH-GPD base excision DNA repair family
           protein similar to DEMETER protein [Arabidopsis
           thaliana] GI:21743571; contains Pfam profile PF00730:
           HhH-GPD superfamily base excision DNA repair protein
          Length = 1309

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 16/52 (30%), Positives = 23/52 (44%)
 Frame = +2

Query: 359 VGVMLVGWGGNNGSTFTAAVLANRHQLSWNTKNGSLDANWFGSITQASTVRL 514
           VGV L     ++ S+     LA    + WN   GS    W  S+TQ + + L
Sbjct: 570 VGVFLTQNVADHSSSSAYMDLAAEFPVEWNFNKGSCHEEWGSSVTQETILNL 621


>At1g51830.1 68414.m05843 leucine-rich repeat protein kinase,
           putative similar to light repressible receptor protein
           kinase GI:1321686 from [Arabidopsis thaliana]
          Length = 675

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 13/52 (25%), Positives = 27/52 (51%)
 Frame = -1

Query: 504 VDACVIEPNQLASREPFFVFQDNWCRLAKTAAVNVEPLLPPHPTSITPTLPT 349
           ++ CV  P+ +  R+ + +FQ++W ++     VN+  +    P S+  T  T
Sbjct: 6   INDCVRFPDDVYDRKWYPIFQNSWTQVTTNLNVNISTIY-ELPQSVMSTAAT 56


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,953,881
Number of Sequences: 28952
Number of extensions: 281838
Number of successful extensions: 691
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 669
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 685
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1412971776
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)