Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0125
(561 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g02110.1 68414.m00137 proline-rich family protein contains pr... 31 0.70
At1g76965.1 68414.m08961 glycine-rich protein 29 1.6
At3g13320.1 68416.m01677 calcium exchanger (CAX2) almost identic... 29 2.1
At5g45900.1 68418.m05645 autophagy 7 (APG7) nearly identical to ... 29 2.8
At2g25050.1 68415.m02996 formin homology 2 domain-containing pro... 29 2.8
At1g01520.1 68414.m00068 myb family transcription factor similar... 29 2.8
At5g37380.2 68418.m04492 DNAJ heat shock N-terminal domain-conta... 28 3.7
At5g37380.1 68418.m04491 DNAJ heat shock N-terminal domain-conta... 28 3.7
At5g11770.1 68418.m01374 NADH-ubiquinone oxidoreductase 20 kDa s... 28 3.7
At1g72520.1 68414.m08386 lipoxygenase, putative similar to lipox... 28 3.7
At5g02840.2 68418.m00227 myb family transcription factor contain... 28 4.9
At5g02840.1 68418.m00226 myb family transcription factor contain... 28 4.9
At2g02800.2 68415.m00225 protein kinase (APK2b) identical to pro... 28 4.9
At2g02800.1 68415.m00224 protein kinase (APK2b) identical to pro... 28 4.9
At5g60000.1 68418.m07524 hypothetical protein 27 6.5
At5g22390.1 68418.m02612 expressed protein 27 6.5
At5g19080.1 68418.m02268 zinc finger (C3HC4-type RING finger) fa... 27 6.5
At4g01280.1 68417.m00169 myb family transcription factor contain... 27 8.6
At2g05210.1 68415.m00549 expressed protein 27 8.6
At2g03890.2 68415.m00352 phosphatidylinositol 3- and 4-kinase fa... 27 8.6
At2g03890.1 68415.m00351 phosphatidylinositol 3- and 4-kinase fa... 27 8.6
At1g55850.1 68414.m06405 cellulose synthase family protein simil... 27 8.6
>At1g02110.1 68414.m00137 proline-rich family protein contains
proline-rich domain, INTERPRO:IPR000694
Length = 679
Score = 30.7 bits (66), Expect = 0.70
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = -2
Query: 482 ITHEHRPDPAPVASASRPNPTRPGPQSQSLFRSYGSNLPTSLTY 351
+ H P+P P S+P PTRP L S S+ P + Y
Sbjct: 83 VPSSHSPEPPPPPIRSKPKPTRPRRLPHILSDSSPSSSPATSFY 126
>At1g76965.1 68414.m08961 glycine-rich protein
Length = 158
Score = 29.5 bits (63), Expect = 1.6
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -1
Query: 459 PGTGRIRFPSKPDTPRSSEPILIPKLRIQFAD 364
PG + FP KP+ P P +P+L + F D
Sbjct: 93 PGAAIVVFPKKPEEPVKVVPTPMPQLNLFFGD 124
>At3g13320.1 68416.m01677 calcium exchanger (CAX2) almost identical
to low affinity calcium antiporter CAX2 (GI:1488267)
[Arabidopsis thaliana]; Ca2+:Cation Antiporter (CaCA)
Family member PMID:11500563
Length = 441
Score = 29.1 bits (62), Expect = 2.1
Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = +3
Query: 48 SIIVPSSLKTSVQRGNPKWPEDAAERSGKSFLFC--LSVRVPWNPI 179
S++ SL TS + PK P+++ S K +FC L++ +P+ P+
Sbjct: 41 SLMEQGSLSTSFPQHTPKAPKNSVLNSIKIVIFCNKLNLLLPFGPL 86
>At5g45900.1 68418.m05645 autophagy 7 (APG7) nearly identical to
autophagy 7 [Arabidopsis thaliana] GI:19912147; contains
Pfam profile PF00899: ThiF family
Length = 697
Score = 28.7 bits (61), Expect = 2.8
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = -1
Query: 246 PQRVSGHRRKCGALRVPNHISLL*DSMELERSGRKENSSRTSRRR 112
P ++G CG +V NH++LL +S+ L+ ++S +R +
Sbjct: 42 PISITGFYGPCGHPQVSNHLTLLSESLPLDEQSLIASTSHGNRNK 86
>At2g25050.1 68415.m02996 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02128
Length = 1111
Score = 28.7 bits (61), Expect = 2.8
Identities = 23/74 (31%), Positives = 35/74 (47%)
Frame = -2
Query: 494 AKTNITHEHRPDPAPVASASRPNPTRPGPQSQSLFRSYGSNLPTSLTYIILSTRGSSPWR 315
A+ +T P P+ SRP P P P SL RS S TS + ++T+G P
Sbjct: 550 AEAAVTSSPLPPLKPLRILSRPPPPPPPPPISSL-RSTPSPSSTSNS---IATQGPPPPP 605
Query: 314 PAADMGTNRRDIST 273
P + ++R +S+
Sbjct: 606 PPPPLQSHRSALSS 619
>At1g01520.1 68414.m00068 myb family transcription factor similar to
myb-related protein GI:2505876 from [Arabidopsis
thaliana]
Length = 287
Score = 28.7 bits (61), Expect = 2.8
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = -2
Query: 524 LRPHYIKY*L-AKTNITHEHRPDPAPVASASRPNPTR 417
+R H KY L + N T EH P P P A+ P P +
Sbjct: 98 IRSHAQKYFLKVQKNGTKEHLPPPRPKRKANHPYPQK 134
>At5g37380.2 68418.m04492 DNAJ heat shock N-terminal
domain-containing protein similar to SP|Q9QYI4 DnaJ
homolog subfamily B member 12 {Mus musculus}; contains
Pfam profile PF00226: DnaJ domain
Length = 431
Score = 28.3 bits (60), Expect = 3.7
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = -3
Query: 499 NSLKRT*RTNIDQTRHRSHPLPVQTRHAPVLRANPYSEVTDP 374
N K T TN T R++P P Q + P + NP ++ T+P
Sbjct: 150 NFAKTTFTTNARTTTPRNNP-PAQKTNPPAQKTNPPAQKTNP 190
>At5g37380.1 68418.m04491 DNAJ heat shock N-terminal
domain-containing protein similar to SP|Q9QYI4 DnaJ
homolog subfamily B member 12 {Mus musculus}; contains
Pfam profile PF00226: DnaJ domain
Length = 431
Score = 28.3 bits (60), Expect = 3.7
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = -3
Query: 499 NSLKRT*RTNIDQTRHRSHPLPVQTRHAPVLRANPYSEVTDP 374
N K T TN T R++P P Q + P + NP ++ T+P
Sbjct: 150 NFAKTTFTTNARTTTPRNNP-PAQKTNPPAQKTNPPAQKTNP 190
>At5g11770.1 68418.m01374 NADH-ubiquinone oxidoreductase 20 kDa
subunit, mitochondrial identical to NADH-ubiquinone
oxidoreductase 20 kDa subunit mitochondrial [precursor]
SP:Q42577 from [Arabidopsis thaliana]; contains Pfam
profile: PF01058 NADH ubiquinone oxidoreductase, 20 Kd
subunit
Length = 218
Score = 28.3 bits (60), Expect = 3.7
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -2
Query: 497 LAKTNITHEHRPDPAPVASASRPNPTRPGPQSQS 396
+A +++H H PA S S + TRPGP S S
Sbjct: 22 VAAASVSHLHTSLPALSPSTSPTSYTRPGPPSTS 55
>At1g72520.1 68414.m08386 lipoxygenase, putative similar to
lipoxygenase gi:1495804 [Solanum tuberosum], gi:1654140
[Lycopersicon esculentum], GB:CAB56692 [Arabidopsis
thaliana]
Length = 926
Score = 28.3 bits (60), Expect = 3.7
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -3
Query: 241 ESIRTPPQMRCSSRSEPYLPSIGFHGTRTLRQK 143
+S + P R ++PYLPS G RTLR+K
Sbjct: 215 QSQKDHPSKRILFTNQPYLPSETPSGLRTLREK 247
>At5g02840.2 68418.m00227 myb family transcription factor contains
PFAM profile: PF00249 myb-like DNA binding domain
Length = 293
Score = 27.9 bits (59), Expect = 4.9
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Frame = -2
Query: 524 LRPHYIKY*L-AKTNITHEHRPDPAPVASASRPNPTRPGPQSQSLFRSYGSNLPTSLTYI 348
+R H KY L + N T H P P P A+ P P + +Q + + PT +
Sbjct: 85 IRSHAQKYFLKVQKNGTLAHVPPPRPKRKAAHPYPQKASKNAQ-MSLHVSMSFPTQIN-- 141
Query: 347 ILSTRGSSPW 318
+ G +PW
Sbjct: 142 --NLPGYTPW 149
>At5g02840.1 68418.m00226 myb family transcription factor contains
PFAM profile: PF00249 myb-like DNA binding domain
Length = 293
Score = 27.9 bits (59), Expect = 4.9
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Frame = -2
Query: 524 LRPHYIKY*L-AKTNITHEHRPDPAPVASASRPNPTRPGPQSQSLFRSYGSNLPTSLTYI 348
+R H KY L + N T H P P P A+ P P + +Q + + PT +
Sbjct: 85 IRSHAQKYFLKVQKNGTLAHVPPPRPKRKAAHPYPQKASKNAQ-MSLHVSMSFPTQIN-- 141
Query: 347 ILSTRGSSPW 318
+ G +PW
Sbjct: 142 --NLPGYTPW 149
>At2g02800.2 68415.m00225 protein kinase (APK2b) identical to
protein kinase APK2b [Arabidopsis thaliana]
gi|2852449|dbj|BAA24695
Length = 426
Score = 27.9 bits (59), Expect = 4.9
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = -1
Query: 468 STRPGTGRIRFPSKPDTPRSSEPILIPKLRIQFA-DFPYLH 349
ST+PGTG ++ D+PR S ++ K +++ D P LH
Sbjct: 368 STKPGTGVGNRQAQIDSPRGSNGSIVQKSPRRYSYDRPLLH 408
>At2g02800.1 68415.m00224 protein kinase (APK2b) identical to
protein kinase APK2b [Arabidopsis thaliana]
gi|2852449|dbj|BAA24695
Length = 426
Score = 27.9 bits (59), Expect = 4.9
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = -1
Query: 468 STRPGTGRIRFPSKPDTPRSSEPILIPKLRIQFA-DFPYLH 349
ST+PGTG ++ D+PR S ++ K +++ D P LH
Sbjct: 368 STKPGTGVGNRQAQIDSPRGSNGSIVQKSPRRYSYDRPLLH 408
>At5g60000.1 68418.m07524 hypothetical protein
Length = 149
Score = 27.5 bits (58), Expect = 6.5
Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Frame = -2
Query: 335 RGSSPWRPAADMGTNRRDISTYIPHLNFKVRREYPD-TAANAVLFAFRTISPFYRIPWNS 159
+GS PW+P +GT R+ + + + D T + F FYR WN+
Sbjct: 78 QGSRPWQPRTCIGTFYREAHFGMHETPYVLYNSDKDATESKNSCFVVVKDDGFYR--WNN 135
Query: 158 NAQAEKKTLP 129
N + K P
Sbjct: 136 NKRIWDKVFP 145
>At5g22390.1 68418.m02612 expressed protein
Length = 202
Score = 27.5 bits (58), Expect = 6.5
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3
Query: 120 ERSGKSFLFCLSVRVPWNPIEG 185
+ S KSFL LS PWNP +G
Sbjct: 17 DNSPKSFLDTLSSSSPWNPSKG 38
>At5g19080.1 68418.m02268 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 378
Score = 27.5 bits (58), Expect = 6.5
Identities = 26/91 (28%), Positives = 36/91 (39%), Gaps = 1/91 (1%)
Frame = -2
Query: 491 KTNITHEHRPDPAPVASASRPNPTRPGPQSQSLFRSYGSNLPTSLTYIILSTRGSSPWRP 312
+ N + H P P S P P +P PQ+ SY N P S + L P +P
Sbjct: 10 RDNNNNHHHPHHNPPYYYSDPPPQQPPPQNG---YSYSHNYPVSTPQLSLP---PPPAQP 63
Query: 311 AADMGTNRRDISTYIPH-LNFKVRREYPDTA 222
+ IS Y P+ N+ + YP A
Sbjct: 64 PSSSQPPPSQIS-YRPYGQNYHQNQYYPQQA 93
>At4g01280.1 68417.m00169 myb family transcription factor contains
PFAM profile: PF00249 myb-like DNA binding domain
Length = 302
Score = 27.1 bits (57), Expect = 8.6
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = -2
Query: 539 KYIQFLRPHYIKY*L-AKTNITHEHRPDPAPVASASRPNPTR 417
K + +R H KY L + + +EH P P P AS P P +
Sbjct: 91 KTVVQIRSHAQKYFLKVQKSGANEHLPPPRPKRKASHPYPIK 132
>At2g05210.1 68415.m00549 expressed protein
Length = 364
Score = 27.1 bits (57), Expect = 8.6
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = -3
Query: 241 ESIRTPPQMRCSSRSEPYLPSIGFHGTRTLRQKRKLFPDLSAASSGHFGLPR 86
+S T C+ +E Y +GF T TLR+KR L S +F PR
Sbjct: 282 DSTATLEAFLCNKDAE-YFWGLGFQDTETLRKKRNWL--LGIRESSNFVAPR 330
>At2g03890.2 68415.m00352 phosphatidylinositol 3- and 4-kinase
family protein low similarity to phosphatidylinositol
4-kinase type-II beta [Homo sapiens] GI:20159767;
contains Pfam profile PF00454: Phosphatidylinositol 3-
and 4-kinase
Length = 530
Score = 27.1 bits (57), Expect = 8.6
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = -1
Query: 168 MELERSGRKENSSRTSRRRLQATLGYPVEHSFLKTRERLL 49
MEL+RS ++ T +RRLQ L +P E S L + +L
Sbjct: 60 MELDRS----DNVHTVKRRLQIALNFPTEESSLTYGDMVL 95
>At2g03890.1 68415.m00351 phosphatidylinositol 3- and 4-kinase
family protein low similarity to phosphatidylinositol
4-kinase type-II beta [Homo sapiens] GI:20159767;
contains Pfam profile PF00454: Phosphatidylinositol 3-
and 4-kinase
Length = 650
Score = 27.1 bits (57), Expect = 8.6
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = -1
Query: 168 MELERSGRKENSSRTSRRRLQATLGYPVEHSFLKTRERLL 49
MEL+RS ++ T +RRLQ L +P E S L + +L
Sbjct: 60 MELDRS----DNVHTVKRRLQIALNFPTEESSLTYGDMVL 95
>At1g55850.1 68414.m06405 cellulose synthase family protein similar
to cellulose synthase catalytic subunit [gi:13925881]
from Nicotiana alata, cellulose synthase-5 [gi:9622882]
from Zea mays
Length = 729
Score = 27.1 bits (57), Expect = 8.6
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = -2
Query: 449 VASASRPNPTRPGPQSQSLFRSYGSNLP 366
V +SR NP P S L R YGS+LP
Sbjct: 82 VTQSSRWNPVWRFPFSDRLSRRYGSDLP 109
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,506,507
Number of Sequences: 28952
Number of extensions: 316994
Number of successful extensions: 1147
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1049
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1144
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1072696904
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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