Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0093
(547 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 180 6e-46
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 180 6e-46
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 180 6e-46
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 180 7e-46
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 179 1e-45
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 179 1e-45
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 179 1e-45
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 179 1e-45
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 178 2e-45
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 165 1e-41
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 158 2e-39
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 156 8e-39
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 111 3e-25
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 98 3e-21
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 86 2e-17
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 71 4e-13
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 62 3e-10
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 60 9e-10
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 51 6e-07
At1g52570.1 68414.m05935 phospholipase D alpha 2 / PLD alpha 2 (... 33 0.16
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 32 0.22
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 32 0.22
At3g15730.1 68416.m01993 phospholipase D alpha 1 / PLD alpha 1 (... 31 0.50
At4g27520.1 68417.m03952 plastocyanin-like domain-containing pro... 30 0.88
At2g19780.1 68415.m02311 leucine-rich repeat family protein / ex... 29 2.0
At1g16690.2 68414.m01999 transcription factor-related similar to... 29 2.0
At1g16690.1 68414.m01998 transcription factor-related similar to... 29 2.0
At3g07870.1 68416.m00962 F-box family protein contains F-box dom... 26 2.5
At3g32904.1 68416.m04164 hypothetical protein 28 3.5
At1g30720.1 68414.m03755 FAD-binding domain-containing protein s... 28 3.5
At3g04570.1 68416.m00485 DNA-binding protein-related contains Pf... 28 4.7
At5g24480.1 68418.m02885 hypothetical protein similar to unknown... 27 6.2
At1g67870.1 68414.m07750 glycine-rich protein contains non-conse... 27 6.2
At1g13830.1 68414.m01623 beta-1,3-glucanase-related similar to b... 27 6.2
At5g25280.2 68418.m02999 serine-rich protein-related contains so... 27 8.2
At5g25280.1 68418.m02998 serine-rich protein-related contains so... 27 8.2
At2g31900.1 68415.m03897 myosin family protein contains Pfam pro... 27 8.2
At2g14100.1 68415.m01570 cytochrome P450 family protein contains... 27 8.2
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 180 bits (438), Expect = 6e-46
Identities = 79/85 (92%), Positives = 84/85 (98%)
Frame = +3
Query: 255 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 434
LKYPIEHG+++NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQIMFET
Sbjct: 69 LKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQIMFET 128
Query: 435 FNSPAMYVAIQAVLSLYDSGRTTGM 509
FNSPAMYVAIQAVLSLY SGRTTG+
Sbjct: 129 FNSPAMYVAIQAVLSLYASGRTTGI 153
Score = 117 bits (281), Expect = 6e-27
Identities = 52/63 (82%), Positives = 57/63 (90%)
Frame = +1
Query: 64 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 243
DD+ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 244 GIL 252
GIL
Sbjct: 65 GIL 67
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 180 bits (438), Expect = 6e-46
Identities = 79/85 (92%), Positives = 84/85 (98%)
Frame = +3
Query: 255 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 434
LKYPIEHG+++NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQIMFET
Sbjct: 69 LKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQIMFET 128
Query: 435 FNSPAMYVAIQAVLSLYDSGRTTGM 509
FNSPAMYVAIQAVLSLY SGRTTG+
Sbjct: 129 FNSPAMYVAIQAVLSLYASGRTTGI 153
Score = 117 bits (281), Expect = 6e-27
Identities = 52/63 (82%), Positives = 57/63 (90%)
Frame = +1
Query: 64 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 243
DD+ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 244 GIL 252
GIL
Sbjct: 65 GIL 67
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 180 bits (438), Expect = 6e-46
Identities = 79/85 (92%), Positives = 84/85 (98%)
Frame = +3
Query: 255 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 434
LKYPIEHG+++NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQIMFET
Sbjct: 69 LKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQIMFET 128
Query: 435 FNSPAMYVAIQAVLSLYDSGRTTGM 509
FNSPAMYVAIQAVLSLY SGRTTG+
Sbjct: 129 FNSPAMYVAIQAVLSLYASGRTTGI 153
Score = 117 bits (281), Expect = 6e-27
Identities = 52/63 (82%), Positives = 57/63 (90%)
Frame = +1
Query: 64 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 243
DD+ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 244 GIL 252
GIL
Sbjct: 65 GIL 67
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 180 bits (437), Expect = 7e-46
Identities = 80/85 (94%), Positives = 84/85 (98%)
Frame = +3
Query: 255 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 434
LKYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET
Sbjct: 69 LKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 128
Query: 435 FNSPAMYVAIQAVLSLYDSGRTTGM 509
FN+PAMYVAIQAVLSLY SGRTTG+
Sbjct: 129 FNTPAMYVAIQAVLSLYASGRTTGI 153
Score = 118 bits (285), Expect = 2e-27
Identities = 54/63 (85%), Positives = 58/63 (92%)
Frame = +1
Query: 64 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 243
+D+ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 244 GIL 252
GIL
Sbjct: 65 GIL 67
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 179 bits (436), Expect = 1e-45
Identities = 80/85 (94%), Positives = 83/85 (97%)
Frame = +3
Query: 255 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 434
LKYPIEHGI+ NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET
Sbjct: 69 LKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 128
Query: 435 FNSPAMYVAIQAVLSLYDSGRTTGM 509
FN+PAMYVAIQAVLSLY SGRTTG+
Sbjct: 129 FNTPAMYVAIQAVLSLYASGRTTGI 153
Score = 118 bits (285), Expect = 2e-27
Identities = 54/63 (85%), Positives = 58/63 (92%)
Frame = +1
Query: 64 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 243
+D+ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 244 GIL 252
GIL
Sbjct: 65 GIL 67
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 179 bits (436), Expect = 1e-45
Identities = 80/85 (94%), Positives = 83/85 (97%)
Frame = +3
Query: 255 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 434
LKYPIEHGI+ NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET
Sbjct: 69 LKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 128
Query: 435 FNSPAMYVAIQAVLSLYDSGRTTGM 509
FN+PAMYVAIQAVLSLY SGRTTG+
Sbjct: 129 FNTPAMYVAIQAVLSLYASGRTTGI 153
Score = 118 bits (285), Expect = 2e-27
Identities = 54/63 (85%), Positives = 58/63 (92%)
Frame = +1
Query: 64 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 243
+D+ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 244 GIL 252
GIL
Sbjct: 65 GIL 67
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 179 bits (435), Expect = 1e-45
Identities = 79/85 (92%), Positives = 83/85 (97%)
Frame = +3
Query: 255 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 434
LKYPIEHGI+ NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQIMFET
Sbjct: 69 LKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFET 128
Query: 435 FNSPAMYVAIQAVLSLYDSGRTTGM 509
FN+PAMYVAIQAVLSLY SGRTTG+
Sbjct: 129 FNAPAMYVAIQAVLSLYASGRTTGI 153
Score = 118 bits (285), Expect = 2e-27
Identities = 54/63 (85%), Positives = 58/63 (92%)
Frame = +1
Query: 64 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 243
+D+ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 244 GIL 252
GIL
Sbjct: 65 GIL 67
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 179 bits (435), Expect = 1e-45
Identities = 79/85 (92%), Positives = 83/85 (97%)
Frame = +3
Query: 255 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 434
LKYPIEHGI+ NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQIMFET
Sbjct: 69 LKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFET 128
Query: 435 FNSPAMYVAIQAVLSLYDSGRTTGM 509
FN+PAMYVAIQAVLSLY SGRTTG+
Sbjct: 129 FNAPAMYVAIQAVLSLYASGRTTGI 153
Score = 118 bits (285), Expect = 2e-27
Identities = 54/63 (85%), Positives = 58/63 (92%)
Frame = +1
Query: 64 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 243
+D+ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 244 GIL 252
GIL
Sbjct: 65 GIL 67
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 178 bits (434), Expect = 2e-45
Identities = 80/85 (94%), Positives = 83/85 (97%)
Frame = +3
Query: 255 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 434
LKYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET
Sbjct: 69 LKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 128
Query: 435 FNSPAMYVAIQAVLSLYDSGRTTGM 509
FN PAMYVAIQAVLSLY SGRTTG+
Sbjct: 129 FNVPAMYVAIQAVLSLYASGRTTGI 153
Score = 118 bits (285), Expect = 2e-27
Identities = 54/63 (85%), Positives = 58/63 (92%)
Frame = +1
Query: 64 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 243
+D+ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 244 GIL 252
GIL
Sbjct: 65 GIL 67
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 165 bits (402), Expect = 1e-41
Identities = 70/85 (82%), Positives = 79/85 (92%)
Frame = +3
Query: 255 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 434
LKYPIEHG+++NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPLNPK NREKMTQIMFE+
Sbjct: 70 LKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNREKMTQIMFES 129
Query: 435 FNSPAMYVAIQAVLSLYDSGRTTGM 509
F P+MY+ IQAVLSLY SGRTTG+
Sbjct: 130 FAFPSMYIGIQAVLSLYSSGRTTGI 154
Score = 110 bits (265), Expect = 5e-25
Identities = 48/63 (76%), Positives = 58/63 (92%)
Frame = +1
Query: 64 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 243
D+ A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VGDEAQ++R
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQARR 65
Query: 244 GIL 252
GIL
Sbjct: 66 GIL 68
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 158 bits (384), Expect = 2e-39
Identities = 75/109 (68%), Positives = 84/109 (77%)
Frame = +3
Query: 183 RDGRYGPERLLRG*RGPEQERYPHLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 362
RDG P G G LK P+EHGI+ NWDDMEKIWH+TFYNELRV PEEHP
Sbjct: 35 RDG-LNPNESYVGEEGHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHP 93
Query: 363 VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYDSGRTTGM 509
VLLTEAP NPKANREKMTQIMFE+F+ PAMYV++Q+VL LY SGRTTG+
Sbjct: 94 VLLTEAPYNPKANREKMTQIMFESFDVPAMYVSMQSVLYLYSSGRTTGV 142
Score = 64.5 bits (150), Expect = 4e-11
Identities = 30/58 (51%), Positives = 39/58 (67%)
Frame = +1
Query: 79 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 252
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVG+E + R IL
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHANRDIL 56
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 156 bits (379), Expect = 8e-39
Identities = 67/84 (79%), Positives = 78/84 (92%)
Frame = +3
Query: 255 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 434
L YP+EHG+++NWDDMEKIW+HTFY+ELRVAPEEHPVLLTEAPLNPKA+REKMTQIMFET
Sbjct: 24 LDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPLNPKADREKMTQIMFET 83
Query: 435 FNSPAMYVAIQAVLSLYDSGRTTG 506
F P+MY+ +QA LSL+ SGRTTG
Sbjct: 84 FAVPSMYIGMQAALSLHASGRTTG 107
Score = 31.9 bits (69), Expect = 0.29
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = +1
Query: 187 MVGMGQKDSYVGDEAQSKRGIL 252
MVGM + D +VGD+A+++ GIL
Sbjct: 1 MVGMNENDLFVGDDAEARSGIL 22
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 111 bits (267), Expect = 3e-25
Identities = 44/85 (51%), Positives = 61/85 (71%)
Frame = +3
Query: 255 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 434
+ YP+ +GI+ NWDDME +W H FYNEL++ P + +LLT+ PLNP NREKM + MFE
Sbjct: 68 INYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREKMIETMFEK 127
Query: 435 FNSPAMYVAIQAVLSLYDSGRTTGM 509
+N +++ IQAVL+LY G TG+
Sbjct: 128 YNFAGVFIQIQAVLTLYAQGLLTGL 152
Score = 51.2 bits (117), Expect = 4e-07
Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Frame = +1
Query: 64 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQS 237
D+ +V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VG+
Sbjct: 2 DNKNVVVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGETCSE 61
Query: 238 KR 243
R
Sbjct: 62 LR 63
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 98.3 bits (234), Expect = 3e-21
Identities = 44/93 (47%), Positives = 61/93 (65%)
Frame = +3
Query: 252 HLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 431
+L YPIEHG + +WD ME+ W +N LR PE+H LLTE+PL P +RE +I+FE
Sbjct: 85 NLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTPPESREYTGEILFE 144
Query: 432 TFNSPAMYVAIQAVLSLYDSGRTTGMCSTPEMV 530
TFN P +Y+A+ +VL+L +G TT C +V
Sbjct: 145 TFNVPGLYIAVNSVLAL-AAGYTTSKCEMTGVV 176
Score = 35.9 bits (79), Expect = 0.018
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +1
Query: 76 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 162
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 85.8 bits (203), Expect = 2e-17
Identities = 35/82 (42%), Positives = 55/82 (67%)
Frame = +3
Query: 264 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 443
PI+ GI+++WD ++ IW H F + L + P EHP+LL E PLN + REK ++MFE +
Sbjct: 94 PIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLNTQQQREKAAELMFEKYKV 153
Query: 444 PAMYVAIQAVLSLYDSGRTTGM 509
PA+++A VL+ + +GR T +
Sbjct: 154 PALFMAKNPVLTSFATGRATSL 175
Score = 57.2 bits (132), Expect = 7e-09
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +1
Query: 64 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 165
D+V+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 71.3 bits (167), Expect = 4e-13
Identities = 37/82 (45%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Frame = +3
Query: 264 PIEHGIITNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFN 440
PIE G+I +WD ME + + Y L E +L T+ PKA RE++ Q+MFETFN
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116
Query: 441 SPAMYVAIQAVLSLYDSGRTTG 506
Y + QAVLSLY GR +G
Sbjct: 117 VSGFYASEQAVLSLYAVGRISG 138
Score = 27.5 bits (58), Expect = 6.2
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 76 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGR 168
ALVVD GS KAG A D +P + PS + R
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR 34
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 61.7 bits (143), Expect = 3e-10
Identities = 24/49 (48%), Positives = 33/49 (67%)
Frame = +3
Query: 264 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 410
P + GI+T+WD ++ +W H F N L + P EHP+LL E PLN + REK
Sbjct: 88 PTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLAEPPLNSQQQREK 136
Score = 58.8 bits (136), Expect = 2e-09
Identities = 27/61 (44%), Positives = 40/61 (65%)
Frame = +1
Query: 64 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 243
D+V+A+VVD GS CKAG+AG+DAP+AVFPS+VG G+ + + E+ ++
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVGAIDGNGMDIDDAANTTEDAKESDKEK 64
Query: 244 G 246
G
Sbjct: 65 G 65
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 60.1 bits (139), Expect = 9e-10
Identities = 28/82 (34%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Frame = +3
Query: 255 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 434
++ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFED 120
Query: 435 FNSPAMYVA-IQAVLSLYDSGR 497
F ++Y+A Q+++ LY++ R
Sbjct: 121 FGFSSLYIAHPQSLVHLYEASR 142
Score = 32.7 bits (71), Expect = 0.16
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +1
Query: 79 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 171
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 50.8 bits (116), Expect = 6e-07
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Frame = +3
Query: 264 PIEHGIITNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 440
P + ++ ++ ME I + F + +HP+L+TE NP +R KM +++FET+
Sbjct: 85 PFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFETYG 144
Query: 441 SPAMYVAIQAVLSLYDSGRTTGMCSTPEMV 530
PA+ + A S Y + G+C +V
Sbjct: 145 VPAVAFGVDAAFS-YKYNQLHGICKKDGIV 173
Score = 44.0 bits (99), Expect = 7e-05
Identities = 21/49 (42%), Positives = 31/49 (63%)
Frame = +1
Query: 79 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD 225
+V+DNG+ + G+AG+ PR VF +IV RPRH+ G+ + VGD
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGD 66
>At1g52570.1 68414.m05935 phospholipase D alpha 2 / PLD alpha 2
(PLDALPHA2) (PLD2) / choline phosphatase 2 identical to
phospholipase D alpha 2 ( PLD alpha 2) SP:Q9SSQ9 from
[Arabidopsis thaliana]
Length = 810
Score = 32.7 bits (71), Expect = 0.16
Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = -3
Query: 437 EGLKHDL-GHLL--PVGLGVEGGFGEQHGVLLGGDTQLIVEGVVPDLL 303
E L+HDL GHLL P+G+ EG E G DT+ + GV D +
Sbjct: 757 ESLEHDLPGHLLRYPIGIASEGNITELPGCEFFPDTKARILGVKSDYM 804
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 32.3 bits (70), Expect = 0.22
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 10/73 (13%)
Frame = +3
Query: 321 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NSPAMYVAIQA 470
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 471 VLSLYDSGRTTGM 509
VL+LY + RT+G+
Sbjct: 241 VLALYAARRTSGI 253
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 32.3 bits (70), Expect = 0.22
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 10/73 (13%)
Frame = +3
Query: 321 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NSPAMYVAIQA 470
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 471 VLSLYDSGRTTGM 509
VL+LY + RT+G+
Sbjct: 241 VLALYAARRTSGI 253
>At3g15730.1 68416.m01993 phospholipase D alpha 1 / PLD alpha 1
(PLDALPHA1) (PLD1) / choline phosphatase 1 identical to
SP:Q38882 Phospholipase D alpha 1 (EC 3.1.4.4)
(AtPLDalpha1) (PLD alpha 1) (Choline phosphatase 1)
(Phosphatidylcholine-hydrolyzing phospholipase D 1)
(PLDalpha) [Arabidopsis thaliana]
Length = 810
Score = 31.1 bits (67), Expect = 0.50
Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = -3
Query: 437 EGLKHDL-GHLL--PVGLGVEGGFGEQHGVLLGGDTQLIVEGVVPDLL 303
E L+HDL GHLL P+G+ EG E G DT+ + G D L
Sbjct: 757 ESLEHDLPGHLLRYPIGVASEGDITELPGFEFFPDTKARILGTKSDYL 804
>At4g27520.1 68417.m03952 plastocyanin-like domain-containing
protein similar to PIR|JC7196 phytocyanin-related
protein Pn14 {Ipomoea nil}; contains Pfam profile
PF02298: Plastocyanin-like domain
Length = 349
Score = 30.3 bits (65), Expect = 0.88
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = +2
Query: 26 PQHKHTQSSRCATTMLLRL*STMAPACARPVSPATTRPAPSSRPSWVA 169
P H+ S A + +MAP PVSP T+ PAP S V+
Sbjct: 181 PGGAHSPKSSSAVSPATSPPGSMAPKSGSPVSPTTSPPAPPKSTSPVS 228
>At2g19780.1 68415.m02311 leucine-rich repeat family protein /
extensin family protein contains leucine rich-repeat
(LRR) domains Pfam:PF00560, INTERPRO:IPR001611; similar
to leucine-rich repeat/extensin 1 (GI:13809918)
[Arabidopsis thaliana]; contains similarity to disease
resistance protein [Lycopersicon esculentum]
gi|3894383|gb|AAC78591
Length = 402
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -3
Query: 416 GHLLPVGLGVEGGFGEQHGVLLGGDTQLIVEGVVPD 309
G+ + VG+G+ GG G+ GV +GG G P+
Sbjct: 28 GYSIGVGVGIGGGDGDDGGVWIGGGNPNSNPGSAPN 63
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.1 bits (62), Expect = 2.0
Identities = 19/59 (32%), Positives = 26/59 (44%)
Frame = +3
Query: 234 EQERYPHLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 410
E +Y +KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 173 EALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.1 bits (62), Expect = 2.0
Identities = 19/59 (32%), Positives = 26/59 (44%)
Frame = +3
Query: 234 EQERYPHLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 410
E +Y +KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 173 EALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At3g07870.1 68416.m00962 F-box family protein contains F-box domain
Pfam:PF00646
Length = 417
Score = 26.2 bits (55), Expect(2) = 2.5
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = -3
Query: 176 WRGRPTMDGKTARGASSPAKPA--LHMPEPL 90
WR T G+ + +SSP KP LH P+
Sbjct: 55 WRSVLTQHGRLSSSSSSPTKPCLLLHCDSPI 85
Score = 21.0 bits (42), Expect(2) = 2.5
Identities = 7/25 (28%), Positives = 15/25 (60%)
Frame = -3
Query: 362 GVLLGGDTQLIVEGVVPDLLHVIPV 288
GV +GG + + E ++ D+ +P+
Sbjct: 18 GVGVGGGLESLPEDIIADIFSRLPI 42
>At3g32904.1 68416.m04164 hypothetical protein
Length = 330
Score = 28.3 bits (60), Expect = 3.5
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +2
Query: 140 APSSRPSWVALATRA*WSVWARKTPTWVTRPRAREVSSP 256
+PS+ P W T W P W + P A ++SSP
Sbjct: 288 SPSNVPQWTIPPTTPQWGT-PSSMPQWSSSPTAPQLSSP 325
Score = 27.1 bits (57), Expect = 8.2
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = -3
Query: 227 SSPT*ESFWPIPTITPWWRGRPTMDGKTARGASSPAKPALHMP 99
+SP+ W IP TP W G P+ + +SSP P L P
Sbjct: 287 NSPSNVPQWTIPPTTPQW-GTPS---SMPQWSSSPTAPQLSSP 325
>At1g30720.1 68414.m03755 FAD-binding domain-containing protein
similar to SP|P30986 reticuline oxidase precursor
(Berberine-bridge-forming enzyme) (BBE)
(Tetrahydroprotoberberine synthase) [Eschscholzia
californica]; contains PF01565 FAD binding domain
Length = 527
Score = 28.3 bits (60), Expect = 3.5
Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Frame = -3
Query: 506 TGGTTGVVQREHGLDRD-VHGGGVEGLKHDLGHLLPVGLG------VEGGFGEQHGVLLG 348
+GG G + R++GL D V G G+ ++ V +G + GG +GV+LG
Sbjct: 182 SGGGYGNLMRKYGLSVDNVFGSGIVDSNGNI-FTDRVSMGEDRFWAIRGGGAASYGVVLG 240
Query: 347 GDTQLIVEGVVPDLLHVIPVGDDTVLDGVLQVRIPLLLWAS 225
QL+ VP+ + V VG TV +G + + ++ W S
Sbjct: 241 YKIQLV---PVPEKVTVFKVG-KTVGEGAVDL---IMKWQS 274
>At3g04570.1 68416.m00485 DNA-binding protein-related contains Pfam
domain PF03479: Domain of unknown function (DUF296),
found in AT-hook motifs Pfam:PF02178
Length = 315
Score = 27.9 bits (59), Expect = 4.7
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Frame = -3
Query: 182 PWWRGRPTMDG--KTARGASSPAKPALHM 102
PWW G+ + G T G+S KP LH+
Sbjct: 4 PWWTGQVNLSGLETTPPGSSQLKKPDLHI 32
>At5g24480.1 68418.m02885 hypothetical protein similar to unknown
protein (gb|AAD32930.1)
Length = 350
Score = 27.5 bits (58), Expect = 6.2
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +2
Query: 8 RVQYQRPQHKHTQSSRCATTMLLRL*STMAPACARPVSPATTRPAPSS 151
R Y PQ + T + C+T LLR M +C P++ +RP P S
Sbjct: 97 RRSYLSPQIRRTITVLCSTEALLRF-LLMGHSCLSPLT--NSRPIPKS 141
>At1g67870.1 68414.m07750 glycine-rich protein contains
non-consensus GG donor splice site at exon2; modeled to
est match.
Length = 279
Score = 27.5 bits (58), Expect = 6.2
Identities = 19/59 (32%), Positives = 26/59 (44%)
Frame = -3
Query: 539 VWRHHLRSRAHTGGTTGVVQREHGLDRDVHGGGVEGLKHDLGHLLPVGLGVEGGFGEQH 363
+ H + H GG Q HG+ H GG G++H GH G+ +G G QH
Sbjct: 136 IQHHDIHGMQHQGGHGMQHQGMHGMQ---HQGG-HGMQHQGGH----GMQHQGMHGMQH 186
Score = 27.1 bits (57), Expect = 8.2
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = -3
Query: 509 HTGGTTGVVQREHGLDRDVHGGGVEGLKHDLGHLLPVGLGVEGGFGEQH 363
H GG Q HG+ G+ G++H GH G+ +GG G QH
Sbjct: 162 HQGGHGMQHQGGHGMQHQ----GMHGMQHQGGH----GMEHQGGHGMQH 202
>At1g13830.1 68414.m01623 beta-1,3-glucanase-related similar to
beta-1,3-glucanase-like protein (GI:14279169) [Olea
europaea] similar to Glucan endo-1,3-beta-glucosidase
precursor (EC 3.2.1.39) ((1-3)-beta- glucan
endohydrolase) ((1-3)-beta-glucanase) (Beta-1,3-
endoglucanase) (Swiss-Prot:P52409) [Triticum aestivum]
Length = 197
Score = 27.5 bits (58), Expect = 6.2
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 86 STMAPACARPVSPATTRPAPSSRP 157
S +A C P SP++TR PS+ P
Sbjct: 98 SNLANGCIYPSSPSSTRSPPSTTP 121
>At5g25280.2 68418.m02999 serine-rich protein-related contains some
similarity to serine-rich proteins
Length = 220
Score = 27.1 bits (57), Expect = 8.2
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3
Query: 33 TNTHKVQDVRRRCCCA 80
+N HK+ D RRRC C+
Sbjct: 114 SNHHKIPDSRRRCMCS 129
>At5g25280.1 68418.m02998 serine-rich protein-related contains some
similarity to serine-rich proteins
Length = 220
Score = 27.1 bits (57), Expect = 8.2
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3
Query: 33 TNTHKVQDVRRRCCCA 80
+N HK+ D RRRC C+
Sbjct: 114 SNHHKIPDSRRRCMCS 129
>At2g31900.1 68415.m03897 myosin family protein contains Pfam
profiles: PF00063 myosin head (motor domain), PF01843
DIL domain, PF00612 IQ calmodulin-binding motif, PF02736
myosin N-terminal SH3-like domain
Length = 1556
Score = 27.1 bits (57), Expect = 8.2
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +3
Query: 288 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 437
NW +E + + + + P LL EA + PK+ E Q M++T+
Sbjct: 480 NWSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKMYQTY 529
>At2g14100.1 68415.m01570 cytochrome P450 family protein contains
Pfam profile PF00067: Cytochrome P450
Length = 518
Score = 27.1 bits (57), Expect = 8.2
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +3
Query: 195 YGPERLLRG*RGPEQERYPHLKY 263
+ PER L RG E+ER LKY
Sbjct: 421 FKPERFLASSRGKEEEREQELKY 443
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,746,164
Number of Sequences: 28952
Number of extensions: 283480
Number of successful extensions: 1078
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 980
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1074
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1023490624
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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