Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0078
(988 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g20500.1 68418.m02436 glutaredoxin, putative similar to gluta... 81 1e-15
At1g77370.1 68414.m09010 glutaredoxin, putative similar to gluta... 77 2e-14
At5g40370.1 68418.m04897 glutaredoxin, putative similar to gluta... 65 6e-11
At5g63030.1 68418.m07907 glutaredoxin, putative similar to gluta... 60 3e-09
At2g20270.1 68415.m02368 glutaredoxin family protein contains gl... 50 2e-06
At4g28730.1 68417.m04109 glutaredoxin family protein contains gl... 44 2e-04
At4g15700.1 68417.m02390 glutaredoxin family protein contains IN... 43 3e-04
At4g15680.1 68417.m02388 glutaredoxin family protein contains IN... 43 4e-04
At4g15690.1 68417.m02389 glutaredoxin family protein contains IN... 42 5e-04
At4g15660.1 68417.m02386 glutaredoxin family protein contains IN... 42 8e-04
At4g15670.1 68417.m02387 glutaredoxin family protein contains IN... 40 0.002
At5g18600.1 68418.m02201 glutaredoxin family protein contains gl... 34 0.17
At1g03020.1 68414.m00274 glutaredoxin family protein contains IN... 33 0.29
At3g62930.1 68416.m07069 glutaredoxin family protein contains gl... 32 0.51
At1g55610.1 68414.m06365 protein kinase family protein contains ... 29 3.6
>At5g20500.1 68418.m02436 glutaredoxin, putative similar to
glutaredoxin [Populus tremula x Populus tremuloides]
gi|19548658|gb|AAL90750
Length = 135
Score = 81.0 bits (191), Expect = 1e-15
Identities = 39/78 (50%), Positives = 51/78 (65%)
Frame = +1
Query: 10 FXKEAISXXKVVVXXKSXCPXXKLAKDVFEKVKQPIKVIELNERDDGNTXQXNLAQLTGF 189
F K+ IS K+V+ KS CP K AK VF ++ Q V+EL+ER+DG + Q L ++ G
Sbjct: 34 FVKKTISSHKIVIFSKSYCPYCKKAKSVFRELDQVPYVVELDEREDGWSIQTALGEIVGR 93
Query: 190 RTVPQVFINGNCVGGGSD 243
RTVPQVFING +GG D
Sbjct: 94 RTVPQVFINGKHLGGSDD 111
>At1g77370.1 68414.m09010 glutaredoxin, putative similar to
glutaredoxin [Ricinus communis] gi|1732424|emb|CAA89699
Length = 130
Score = 76.6 bits (180), Expect = 2e-14
Identities = 34/86 (39%), Positives = 53/86 (61%)
Frame = +1
Query: 1 IQQFXKEAISXXKVVVXXKSXCPXXKLAKDVFEKVKQPIKVIELNERDDGNTXQXNLAQL 180
+ F + AI K+V+ KS CP +K +F ++K+ V+EL++R+DG+ Q L +
Sbjct: 33 VSAFVQNAILSNKIVIFSKSYCPYCLRSKRIFSQLKEEPFVVELDQREDGDQIQYELLEF 92
Query: 181 TGFRTVPQVFINGNCVGGGSDVKAXM 258
G RTVPQVF+NG +GG D+ A +
Sbjct: 93 VGRRTVPQVFVNGKHIGGSDDLGAAL 118
>At5g40370.1 68418.m04897 glutaredoxin, putative similar to
glutaredoxin [Ricinus communis] SWISS-PROT:P55143
Length = 111
Score = 65.3 bits (152), Expect = 6e-11
Identities = 31/76 (40%), Positives = 44/76 (57%)
Frame = +1
Query: 7 QFXKEAISXXKVVVXXKSXCPXXKLAKDVFEKVKQPIKVIELNERDDGNTXQXNLAQLTG 186
Q KE ++ VVV K+ CP K++ +++ K +EL+ DG+ Q LA+ TG
Sbjct: 4 QKAKEIVNSESVVVFSKTYCPYCVRVKELLQQLGAKFKAVELDTESDGSQIQSGLAEWTG 63
Query: 187 FRTVPQVFINGNCVGG 234
RTVP VFI GN +GG
Sbjct: 64 QRTVPNVFIGGNHIGG 79
>At5g63030.1 68418.m07907 glutaredoxin, putative similar to
glutaredoxin [Ricinus communis] gi|1732424|emb|CAA89699
Length = 125
Score = 59.7 bits (138), Expect = 3e-09
Identities = 30/73 (41%), Positives = 41/73 (56%)
Frame = +1
Query: 16 KEAISXXKVVVXXKSXCPXXKLAKDVFEKVKQPIKVIELNERDDGNTXQXNLAQLTGFRT 195
KE +S VVV K+ C + K + ++ KV+EL+E DG Q L++ TG T
Sbjct: 23 KEIVSAYPVVVFSKTYCGYCQRVKQLLTQLGATFKVLELDEMSDGGEIQSALSEWTGQTT 82
Query: 196 VPQVFINGNCVGG 234
VP VFI GN +GG
Sbjct: 83 VPNVFIKGNHIGG 95
>At2g20270.1 68415.m02368 glutaredoxin family protein contains
glutaredoxin domain, Pfam:PF00462
Length = 179
Score = 50.4 bits (115), Expect = 2e-06
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Frame = +1
Query: 1 IQQFXKEAISXXKVVVXXKSXCPXXKLAKDVFEKVKQPIKVIELNER-DDGNTXQXNLAQ 177
+++ K ++ VVV K+ C K +F+ ++ V+EL++ +G+ Q L +
Sbjct: 74 LEETVKTTVAENPVVVYSKTWCSYSSQVKSLFKSLQVEPLVVELDQLGSEGSQLQNVLEK 133
Query: 178 LTGFRTVPQVFINGNCVGGGSD 243
+TG TVP VFI G +GG SD
Sbjct: 134 ITGQYTVPNVFIGGKHIGGCSD 155
>At4g28730.1 68417.m04109 glutaredoxin family protein contains
glutaredoxin domain, Pfam:PF00462
Length = 174
Score = 44.0 bits (99), Expect = 2e-04
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Frame = +1
Query: 1 IQQFXKEAISXXKVVVXXKSXCPXXKLAKDVFEKVKQPIKVIELNERD-DGNTXQXNLAQ 177
+++ ++ ++ VV+ K+ C K +F+++ V+EL++ G Q L +
Sbjct: 69 MEESIRKTVTENTVVIYSKTWCSYCTEVKTLFKRLGVQPLVVELDQLGPQGPQLQKVLER 128
Query: 178 LTGFRTVPQVFINGNCVGGGSD 243
LTG TVP VF+ G +GG +D
Sbjct: 129 LTGQHTVPNVFVCGKHIGGCTD 150
>At4g15700.1 68417.m02390 glutaredoxin family protein contains
INTERPRO Domain IPR002109, Glutaredoxin
(thioltransferase)
Length = 102
Score = 43.2 bits (97), Expect = 3e-04
Identities = 27/77 (35%), Positives = 37/77 (48%)
Frame = +1
Query: 16 KEAISXXKVVVXXKSXCPXXKLAKDVFEKVKQPIKVIELNERDDGNTXQXNLAQLTGFRT 195
++ IS VV+ K+ C K +F + + EL+E G + LAQL T
Sbjct: 5 QKMISEKSVVIFSKNSCCMSHTIKTLFLDLGVNPTIYELDEISRGKEIEHALAQLGCSPT 64
Query: 196 VPQVFINGNCVGGGSDV 246
VP VFI G VGG + V
Sbjct: 65 VPVVFIGGQLVGGANQV 81
>At4g15680.1 68417.m02388 glutaredoxin family protein contains
INTERPRO Domain IPR002109, Glutaredoxin
(thioltransferase)
Length = 102
Score = 42.7 bits (96), Expect = 4e-04
Identities = 27/77 (35%), Positives = 37/77 (48%)
Frame = +1
Query: 16 KEAISXXKVVVXXKSXCPXXKLAKDVFEKVKQPIKVIELNERDDGNTXQXNLAQLTGFRT 195
++ IS VV+ K+ C K +F + EL+E + G + LAQL T
Sbjct: 5 QKMISEKSVVIFSKNSCCMSHTIKTLFIDFGVNPTIYELDEINRGKEIEQALAQLGCSPT 64
Query: 196 VPQVFINGNCVGGGSDV 246
VP VFI G VGG + V
Sbjct: 65 VPVVFIGGQLVGGANQV 81
>At4g15690.1 68417.m02389 glutaredoxin family protein contains
INTERPRO Domain IPR002109, Glutaredoxin
(thioltransferase)
Length = 102
Score = 42.3 bits (95), Expect = 5e-04
Identities = 27/77 (35%), Positives = 37/77 (48%)
Frame = +1
Query: 16 KEAISXXKVVVXXKSXCPXXKLAKDVFEKVKQPIKVIELNERDDGNTXQXNLAQLTGFRT 195
++ IS VV+ K+ C K +F + EL+E + G + LAQL T
Sbjct: 5 QKMISEKSVVIFSKNSCCMSHTIKTLFLDFGVNPTIYELDEINIGREIEQALAQLGCSPT 64
Query: 196 VPQVFINGNCVGGGSDV 246
VP VFI G VGG + V
Sbjct: 65 VPVVFIGGQLVGGANQV 81
>At4g15660.1 68417.m02386 glutaredoxin family protein contains
INTERPRO Domain IPR002109, Glutaredoxin
(thioltransferase)
Length = 102
Score = 41.5 bits (93), Expect = 8e-04
Identities = 26/77 (33%), Positives = 37/77 (48%)
Frame = +1
Query: 16 KEAISXXKVVVXXKSXCPXXKLAKDVFEKVKQPIKVIELNERDDGNTXQXNLAQLTGFRT 195
++ IS VV+ + C K +F + + EL+E + G + LAQL T
Sbjct: 5 QKMISEKSVVIFSNNSCCMSHTIKTLFLDLGVNPTIYELDEINRGKEIEYALAQLGCSPT 64
Query: 196 VPQVFINGNCVGGGSDV 246
VP VFI G VGG + V
Sbjct: 65 VPVVFIGGQLVGGANQV 81
>At4g15670.1 68417.m02387 glutaredoxin family protein contains
INTERPRO Domain IPR002109, Glutaredoxin
(thioltransferase)
Length = 102
Score = 40.3 bits (90), Expect = 0.002
Identities = 25/73 (34%), Positives = 35/73 (47%)
Frame = +1
Query: 28 SXXKVVVXXKSXCPXXKLAKDVFEKVKQPIKVIELNERDDGNTXQXNLAQLTGFRTVPQV 207
S +V+ K+ C K +F + + EL+E + G + LAQL TVP V
Sbjct: 9 SEKSLVIFSKNSCCMSHTIKTLFLDLGVNPTIYELDEINRGKEIEQALAQLGCSPTVPVV 68
Query: 208 FINGNCVGGGSDV 246
FI G VGG + V
Sbjct: 69 FIGGQLVGGANQV 81
>At5g18600.1 68418.m02201 glutaredoxin family protein contains
glutaredoxin domain, INTERPRO:IPR002109
Length = 102
Score = 33.9 bits (74), Expect = 0.17
Identities = 23/69 (33%), Positives = 30/69 (43%)
Frame = +1
Query: 40 VVVXXKSXCPXXKLAKDVFEKVKQPIKVIELNERDDGNTXQXNLAQLTGFRTVPQVFING 219
VV+ KS C K + V EL+E G + L +L VP VFI G
Sbjct: 13 VVIYSKSSCCMSHTIKTLLCDFGANPAVYELDEISRGREIEQALLRLGCSPAVPGVFIGG 72
Query: 220 NCVGGGSDV 246
VGG ++V
Sbjct: 73 ELVGGANEV 81
>At1g03020.1 68414.m00274 glutaredoxin family protein contains
INTERPRO Domain IPR002109, Glutaredoxin
(thioltransferase)
Length = 102
Score = 33.1 bits (72), Expect = 0.29
Identities = 21/69 (30%), Positives = 30/69 (43%)
Frame = +1
Query: 40 VVVXXKSXCPXXKLAKDVFEKVKQPIKVIELNERDDGNTXQXNLAQLTGFRTVPQVFING 219
VV+ K+ C K + V EL+E +G + L +L TVP VFI
Sbjct: 13 VVIFSKTSCCMSHSIKSLISGYGANSTVYELDEMSNGPEIERALVELGCKPTVPAVFIGQ 72
Query: 220 NCVGGGSDV 246
VGG + +
Sbjct: 73 ELVGGANQL 81
>At3g62930.1 68416.m07069 glutaredoxin family protein contains
glutaredoxin domain, INTERPRO:IPR002109
Length = 102
Score = 32.3 bits (70), Expect = 0.51
Identities = 19/77 (24%), Positives = 33/77 (42%)
Frame = +1
Query: 16 KEAISXXKVVVXXKSXCPXXKLAKDVFEKVKQPIKVIELNERDDGNTXQXNLAQLTGFRT 195
+ + VV+ KS C + + + V EL++ +G + L Q+ +
Sbjct: 5 RSLVEDKPVVIFSKSSCCMSHSIQTLISGFGAKMTVYELDQFSNGQEIEKALVQMGCKPS 64
Query: 196 VPQVFINGNCVGGGSDV 246
VP VFI +GG + V
Sbjct: 65 VPAVFIGQQFIGGANQV 81
>At1g55610.1 68414.m06365 protein kinase family protein contains
Prosite:PS00107: Protein kinases ATP-binding region
signature
Length = 1166
Score = 29.5 bits (63), Expect = 3.6
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +1
Query: 118 KVIELNERDDGNTXQXNLAQLTGFRTVPQVFINGNCVGGGSD 243
+++ L+ R+ G T NL LT + +++ GN G D
Sbjct: 78 RIVGLDLRNSGLTGTLNLVNLTALPNLQNLYLQGNYFSSGGD 119
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,799,943
Number of Sequences: 28952
Number of extensions: 188106
Number of successful extensions: 305
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 285
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 303
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2402185656
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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