Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0236
         (468 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g63450.1 68418.m07965 cytochrome P450, putative                     31   0.51 
At5g56690.1 68418.m07076 F-box family protein contains F-box dom...    30   0.68 
At4g24015.1 68417.m03451 zinc finger (RING-H2 type) protein-rela...    30   0.68 
At3g48520.1 68416.m05296 cytochrome P450 family protein similar ...    30   0.68 
At5g03800.1 68418.m00347 exostosin family protein / pentatricope...    29   1.6  
At4g00730.1 68417.m00099 anthocyaninless2 (ANL2) nearly identica...    28   2.7  
At4g39510.1 68417.m05587 cytochrome P450 family protein contains...    27   8.4  

>At5g63450.1 68418.m07965 cytochrome P450, putative
          Length = 510

 Score = 30.7 bits (66), Expect = 0.51
 Identities = 18/44 (40%), Positives = 26/44 (59%)
 Frame = +2

Query: 2   FFGDGKDKTSPKVSWKFIALWENNKVYFKILNTERNQYLVLGVG 133
           F   G+D TS  ++W F  L +N+ V  KIL+  RN+   LG+G
Sbjct: 302 FIMAGRDTTSAAMTWLFWLLSQNDDVETKILDELRNKG-SLGLG 344


>At5g56690.1 68418.m07076 F-box family protein contains F-box domain
           Pfam:PF00646
          Length = 402

 Score = 30.3 bits (65), Expect = 0.68
 Identities = 17/60 (28%), Positives = 31/60 (51%)
 Frame = +2

Query: 68  NNKVYFKILNTERNQYLVLGVGTNPNGDHMAFGVNSVDSFRAQWYLQPAKYDKDNLFYIY 247
           N+K ++K    +  +YL +    N       F +NS+++FR +WY    + D+D L  I+
Sbjct: 333 NSKSFYK---EKIGEYLPVSWSKNQGSVPKCF-LNSLETFRVKWYYSEEQEDRDFLSLIF 388


>At4g24015.1 68417.m03451 zinc finger (RING-H2 type) protein-related
           low similarity to RING-H2 zinc finger protein ATL4
           [Arabidopsis thaliana] GI:4928399
          Length = 174

 Score = 30.3 bits (65), Expect = 0.68
 Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
 Frame = -1

Query: 468 KEYQKSVFYFPNNISLLLILVGFREYLKYNLKCLNTPSVMF--GTSDHST 325
           K YQ  +F  P   S++L L+ +  YLK     L++PS M    +S H T
Sbjct: 20  KLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSPSPMILPVSSSHQT 69


>At3g48520.1 68416.m05296 cytochrome P450 family protein similar to
           Cytochrome P450 94A1  (P450-dependent fatty acid
           omega-hydroxylase) (SP:O81117) {Vicia sativa}; contains
           Pfam profile: PF00067 cytochrome P450
          Length = 506

 Score = 30.3 bits (65), Expect = 0.68
 Identities = 18/44 (40%), Positives = 25/44 (56%)
 Frame = +2

Query: 2   FFGDGKDKTSPKVSWKFIALWENNKVYFKILNTERNQYLVLGVG 133
           F   G+D TS  ++W F  L EN+ V  KIL  E +  + LG+G
Sbjct: 300 FIMAGRDTTSAAMTWLFWLLTENDDVERKILE-EVDPLVSLGLG 342


>At5g03800.1 68418.m00347 exostosin family protein /
           pentatricopeptide (PPR) repeat-containing protein
           contains Pfam profiles: PF03016 exostosin family,
           PF01535 PPR repeat
          Length = 1388

 Score = 29.1 bits (62), Expect = 1.6
 Identities = 14/36 (38%), Positives = 23/36 (63%)
 Frame = -1

Query: 126 PNTKYWLRSVFKILK*TLLFSHRAMNFQLTFGLVLS 19
           PNT+Y L+ V + +K + LF H A    +T+G++ S
Sbjct: 806 PNTEYVLQEVDEFMKKSFLFHHSA-KLAVTYGILSS 840


>At4g00730.1 68417.m00099 anthocyaninless2 (ANL2) nearly identical
           to Anthocyaninless2 [Arabidopsis thaliana] GI:5702094
          Length = 802

 Score = 28.3 bits (60), Expect = 2.7
 Identities = 13/23 (56%), Positives = 13/23 (56%)
 Frame = +2

Query: 95  NTERNQYLVLGVGTNPNGDHMAF 163
           N   N  L L VGTN NG H AF
Sbjct: 270 NHHYNSSLELAVGTNNNGGHFAF 292


>At4g39510.1 68417.m05587 cytochrome P450 family protein contains
           Pfam PF00067: Cytochrome P450; similar to  Cytochrome
           P450 86A2 (SP:O23066) [Arabidopsis thaliana]
          Length = 508

 Score = 26.6 bits (56), Expect = 8.4
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +2

Query: 14  GKDKTSPKVSWKFIALWENNKVYFKI 91
           G+D TS  +SW F  L EN +V  KI
Sbjct: 312 GRDTTSSALSWFFWLLSENPQVVTKI 337


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,320,025
Number of Sequences: 28952
Number of extensions: 207881
Number of successful extensions: 511
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 502
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 511
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 791932800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)