Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0201
         (753 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g53250.1 68416.m05869 auxin-responsive family protein similar...    28   7.7  
At3g08510.1 68416.m00988 phosphoinositide-specific phospholipase...    28   7.7  
At2g37030.1 68415.m04542 auxin-responsive family protein similar...    28   7.7  

>At3g53250.1 68416.m05869 auxin-responsive family protein similar to
           auxin-induced protein TGSAUR22 (GI:10185820) [Tulipa
           gesneriana and auxin-induced protein 6B (SP:P33083)
           (PIR:T10942)  [Glycine max]
          Length = 109

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = -2

Query: 299 YLPCREWVICAPAAFLDVVAVSQAPSPESN 210
           Y   R W+ C    FLDVV  S AP  + N
Sbjct: 76  YNSSRLWIPCDENTFLDVVRCSGAPQHQRN 105


>At3g08510.1 68416.m00988 phosphoinositide-specific phospholipase C
           (PLC2) identical to phosphoinositide specific
           phospholipase C(AtPLC2) GI:857374 [Arabidopsis thaliana]
          Length = 581

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 13/54 (24%), Positives = 26/54 (48%)
 Frame = -2

Query: 200 PLPVTTMVVAETTIES**GRHLKDASPVLDHAICKSYPDSSKLTTSDARPSVDW 39
           P  V  + ++E  +E    ++ K       H + + YP  +++T+S+  P V W
Sbjct: 339 PDKVRRLSLSEEQLEKAAEKYAKQIVRFTQHNLLRIYPKGTRVTSSNYNPLVGW 392


>At2g37030.1 68415.m04542 auxin-responsive family protein similar to
           auxin-induced protein TGSAUR22 (GI:10185820) [Tulipa
           gesneriana]
          Length = 124

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -2

Query: 287 REWVICAPAAFLDVVAVSQAPSPESN 210
           R W+ C  + FLDVV  + AP  ++N
Sbjct: 95  RLWIPCNESTFLDVVRCAGAPQHQNN 120


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,239,038
Number of Sequences: 28952
Number of extensions: 341879
Number of successful extensions: 828
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 827
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1672953192
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)