Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0158
(778 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g02190.2 68414.m00150 CER1 protein, putative similar to CER1 ... 32 0.49
At1g02190.1 68414.m00149 CER1 protein, putative similar to CER1 ... 32 0.49
At3g13530.1 68416.m01701 MAP3K epsilon protein kinase identical ... 31 0.64
At5g46050.1 68418.m05663 proton-dependent oligopeptide transport... 30 1.5
At3g07980.1 68416.m00975 protein kinase, putative similar to MAP... 29 4.5
At5g14580.1 68418.m01710 polyribonucleotide nucleotidyltransfera... 28 6.0
At4g24480.1 68417.m03509 serine/threonine protein kinase, putati... 28 6.0
At4g10540.1 68417.m01726 subtilase family protein contains simil... 28 6.0
At2g25730.1 68415.m03084 expressed protein 28 6.0
At1g02460.1 68414.m00195 glycoside hydrolase family 28 protein /... 28 6.0
At5g53520.1 68418.m06651 oligopeptide transporter OPT family pro... 28 7.9
At3g03480.1 68416.m00346 transferase family protein similar to h... 28 7.9
>At1g02190.2 68414.m00150 CER1 protein, putative similar to CER1
GI:1199467 and maize gl1 homolog (glossy1 locus)
GI:1209703 from [Arabidopsis thaliana]
Length = 623
Score = 31.9 bits (69), Expect = 0.49
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Frame = +3
Query: 435 YDGFPFQLFVFVYPYE---PTPKESEPLSLLFRTTNHSVIHSIAPFFLSTSNNLTCS-SR 602
++ FP +LF P + TP FRT N+S+ I F T++NLT S
Sbjct: 224 FELFPKRLFHLFPPLKFLCYTPSFHSLHHTQFRT-NYSLFMPIYDFIYGTTDNLTDSLYE 282
Query: 603 RSWSTMKENYSPIYLTFLTIH 665
RS +E+ I+LT LT H
Sbjct: 283 RSLEIEEESPDVIHLTHLTTH 303
>At1g02190.1 68414.m00149 CER1 protein, putative similar to CER1
GI:1199467 and maize gl1 homolog (glossy1 locus)
GI:1209703 from [Arabidopsis thaliana]
Length = 627
Score = 31.9 bits (69), Expect = 0.49
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Frame = +3
Query: 435 YDGFPFQLFVFVYPYE---PTPKESEPLSLLFRTTNHSVIHSIAPFFLSTSNNLTCS-SR 602
++ FP +LF P + TP FRT N+S+ I F T++NLT S
Sbjct: 224 FELFPKRLFHLFPPLKFLCYTPSFHSLHHTQFRT-NYSLFMPIYDFIYGTTDNLTDSLYE 282
Query: 603 RSWSTMKENYSPIYLTFLTIH 665
RS +E+ I+LT LT H
Sbjct: 283 RSLEIEEESPDVIHLTHLTTH 303
>At3g13530.1 68416.m01701 MAP3K epsilon protein kinase identical to
MAP3K epsilon protein kinase [Arabidopsis thaliana]
gi|3549652|emb|CAA12272
Length = 1368
Score = 31.5 bits (68), Expect = 0.64
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -1
Query: 520 NNRLNGSDSLGVGSYG*TNTNSWKGNPSYVPLGSISLEGIVSEELN 383
+N+ D +G G+YG N +V + +SLE IV E+LN
Sbjct: 17 DNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIVQEDLN 62
>At5g46050.1 68418.m05663 proton-dependent oligopeptide transport
(POT) family protein contains Pfam profile: PF00854 POT
family
Length = 582
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/64 (23%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +3
Query: 477 YEPTPKESEPLSLLFRTTNHSVIHSIAPFFLSTSNNLTCSSRRSW--STMKENYSPIYLT 650
Y+ P+ + L + TT+ ++ + ++ F LST + +T R W + + E+ Y
Sbjct: 482 YDQAPESMKSLGTSYSTTSLAIGNFMSSFLLSTVSEITKKRGRGWILNNLNESRLDYYYL 541
Query: 651 FLTI 662
F +
Sbjct: 542 FFAV 545
>At3g07980.1 68416.m00975 protein kinase, putative similar to MAP3K
epsilon protein kinase [Arabidopsis thaliana]
gi|3549652|emb|CAA12272
Length = 1367
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = -1
Query: 520 NNRLNGSDSLGVGSYG*TNTNSWKGNPSYVPLGSISLEGIVSEELN 383
+N+ D +G G+YG N +V + +SLE I E+LN
Sbjct: 17 DNKYMLGDEIGKGAYGRVYIGLDLENGDFVAIKQVSLENIGQEDLN 62
>At5g14580.1 68418.m01710 polyribonucleotide nucleotidyltransferase,
putative similar to Swiss-Prot:P05055 polyribonucleotide
nucleotidyltransferase (EC 2.7.7.8) (Polynucleotide
phosphorylase) (PNPase) [Escherichia coli]
Length = 991
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +3
Query: 543 IHSIAPFFLSTSNNLTCSSRRSWSTMKENYS 635
+ S++P ST++NL S+ STMKEN S
Sbjct: 877 LKSVSPKNNSTASNLVSFSKAKKSTMKENLS 907
>At4g24480.1 68417.m03509 serine/threonine protein kinase, putative
similar to serine/threonine-protein kinase CTR1
[Arabidopsis thaliana] SWISS-PROT:Q05609
Length = 963
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -1
Query: 541 TEWFVVRNNRLNGSDSLGVGSYG*TNTNSWKGNPSYVPLGSI 416
++W V N L+ + +G GS+G + W G+ V + SI
Sbjct: 659 SDWLEVSWNELHIKERVGAGSFGTVHRAEWHGSDVAVKILSI 700
>At4g10540.1 68417.m01726 subtilase family protein contains
similarity to subtilase; SP1 GI:9957714 from [Oryza
sativa]
Length = 775
Score = 28.3 bits (60), Expect = 6.0
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Frame = +3
Query: 408 SRLMLPKGTYDGFPFQLFVFVYPYEPTPKE---SEPLSLLFRTTNHSVIHSIAPFFLSTS 578
++L+L + Y G VYP P S LLF +NH++ + F +++
Sbjct: 366 NKLILGQAMYTGPELGFTSLVYPENPGNSNESFSGDCELLFFNSNHTMAGKVVLCFTTST 425
Query: 579 NNLTCSSRRSW 611
+T SS S+
Sbjct: 426 RYITVSSAVSY 436
>At2g25730.1 68415.m03084 expressed protein
Length = 2464
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/57 (26%), Positives = 31/57 (54%)
Frame = -1
Query: 619 MVDQDLLEEHVRLFEVLRKNGAIEWITEWFVVRNNRLNGSDSLGVGSYG*TNTNSWK 449
++D+ L + + L + +NGA +W+ + ++++ N S S YG +NSW+
Sbjct: 1315 LIDEGKLMDALALSDRFLRNGASDWLLQ-LLIKSREENPSTSGRSQGYG-GQSNSWQ 1369
>At1g02460.1 68414.m00195 glycoside hydrolase family 28 protein /
polygalacturonase (pectinase) family protein similar to
polygalacturonase PG1 GI:5669846, PG2 GI:5669848 from
(Glycine max); contains PF00295: Glycosyl hydrolases
family 28 (polygalacturonases)
Length = 491
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -1
Query: 94 VVDGPCNRERALEFFFTEVDSVEGIEVE 11
+V GPC+ AL FF + VEG++++
Sbjct: 215 IVTGPCDSPIALRFFMSSNLRVEGLQIK 242
>At5g53520.1 68418.m06651 oligopeptide transporter OPT family
protein similar to SP|P40900 Sexual differentiation
process protein isp4 {Schizosaccharomyces pombe},
oligopeptide transporter Opt1p [Candida albicans]
GI:2367386; contains Pfam profile PF03169: OPT
oligopeptide transporter protein
Length = 733
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -1
Query: 583 LFEVLRKNGAIEWITEWFVVRNNRLNGSDSLGVGSYG 473
LF VL + WI+ ++ N +GS LG+GS+G
Sbjct: 227 LFTVLTTVSWLCWISPKSILVNQLGSGSAGLGIGSFG 263
>At3g03480.1 68416.m00346 transferase family protein similar to
hypersensitivity-related gene GB:CAA64636 [Nicotiana
tabacum]; contains Pfam transferase family domain
PF00248
Length = 454
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Frame = +3
Query: 402 MPSRLMLPKGTYDGFPFQLF----VFVYPYEPTPKESEPLS 512
M ++ LP+ T G F++ V P +PTP+E +PLS
Sbjct: 1 MDHQVSLPQSTTTGLSFKVHRQQRELVTPAKPTPRELKPLS 41
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,291,155
Number of Sequences: 28952
Number of extensions: 321420
Number of successful extensions: 901
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 874
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 901
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1736283200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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