Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20018
(606 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 184 5e-47
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 183 7e-47
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 183 7e-47
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 182 2e-46
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 181 4e-46
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 181 4e-46
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 180 9e-46
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 180 9e-46
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 180 9e-46
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 163 1e-40
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 157 4e-39
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 151 3e-37
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 99 3e-21
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 93 2e-19
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 80 1e-15
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 66 2e-11
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 54 7e-08
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 52 2e-07
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 43 2e-04
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.084
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 28 4.2
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 28 4.2
At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase, put... 28 4.2
At1g16690.2 68414.m01999 transcription factor-related similar to... 28 4.2
At1g16690.1 68414.m01998 transcription factor-related similar to... 28 4.2
At1g43245.1 68414.m04985 expressed protein 28 5.5
At5g64580.1 68418.m08116 AAA-type ATPase family protein similar ... 27 7.3
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 7.3
At1g02110.1 68414.m00137 proline-rich family protein contains pr... 27 7.3
At1g55420.1 68414.m06339 DC1 domain-containing protein contains ... 27 9.6
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 184 bits (447), Expect = 5e-47
Identities = 83/91 (91%), Positives = 86/91 (94%)
Frame = +1
Query: 238 GTEGLFVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 417
G + +VGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 109
Query: 418 APLNPKANREXMTQIMFXTFNTPAMYVAIQA 510
APLNPKANRE MTQIMF TFNTPAMYVAIQA
Sbjct: 110 APLNPKANREKMTQIMFETFNTPAMYVAIQA 140
Score = 92.3 bits (219), Expect = 2e-19
Identities = 41/50 (82%), Positives = 45/50 (90%)
Frame = +2
Query: 104 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 253
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDA 54
Score = 67.7 bits (158), Expect = 6e-12
Identities = 31/33 (93%), Positives = 32/33 (96%)
Frame = +3
Query: 507 SVLSLYASGRXTGIVLDSGDGVSHTVPIYEGYA 605
+VLSLYASGR TGIVLDSGDGVSHTVPIYEGYA
Sbjct: 140 AVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 172
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 183 bits (446), Expect = 7e-47
Identities = 83/91 (91%), Positives = 85/91 (93%)
Frame = +1
Query: 238 GTEGLFVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 417
G + +VGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 109
Query: 418 APLNPKANREXMTQIMFXTFNTPAMYVAIQA 510
APLNPKANRE MTQIMF TFNTPAMYVAIQA
Sbjct: 110 APLNPKANREKMTQIMFETFNTPAMYVAIQA 140
Score = 92.3 bits (219), Expect = 2e-19
Identities = 41/50 (82%), Positives = 45/50 (90%)
Frame = +2
Query: 104 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 253
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDA 54
Score = 67.7 bits (158), Expect = 6e-12
Identities = 31/33 (93%), Positives = 32/33 (96%)
Frame = +3
Query: 507 SVLSLYASGRXTGIVLDSGDGVSHTVPIYEGYA 605
+VLSLYASGR TGIVLDSGDGVSHTVPIYEGYA
Sbjct: 140 AVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 172
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 183 bits (446), Expect = 7e-47
Identities = 83/91 (91%), Positives = 85/91 (93%)
Frame = +1
Query: 238 GTEGLFVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 417
G + +VGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 109
Query: 418 APLNPKANREXMTQIMFXTFNTPAMYVAIQA 510
APLNPKANRE MTQIMF TFNTPAMYVAIQA
Sbjct: 110 APLNPKANREKMTQIMFETFNTPAMYVAIQA 140
Score = 92.3 bits (219), Expect = 2e-19
Identities = 41/50 (82%), Positives = 45/50 (90%)
Frame = +2
Query: 104 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 253
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDA 54
Score = 67.7 bits (158), Expect = 6e-12
Identities = 31/33 (93%), Positives = 32/33 (96%)
Frame = +3
Query: 507 SVLSLYASGRXTGIVLDSGDGVSHTVPIYEGYA 605
+VLSLYASGR TGIVLDSGDGVSHTVPIYEGYA
Sbjct: 140 AVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 172
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 182 bits (442), Expect = 2e-46
Identities = 82/91 (90%), Positives = 85/91 (93%)
Frame = +1
Query: 238 GTEGLFVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 417
G + +VGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 109
Query: 418 APLNPKANREXMTQIMFXTFNTPAMYVAIQA 510
APLNPKANRE MTQIMF TFN PAMYVAIQA
Sbjct: 110 APLNPKANREKMTQIMFETFNVPAMYVAIQA 140
Score = 92.3 bits (219), Expect = 2e-19
Identities = 41/50 (82%), Positives = 45/50 (90%)
Frame = +2
Query: 104 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 253
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDA 54
Score = 67.7 bits (158), Expect = 6e-12
Identities = 31/33 (93%), Positives = 32/33 (96%)
Frame = +3
Query: 507 SVLSLYASGRXTGIVLDSGDGVSHTVPIYEGYA 605
+VLSLYASGR TGIVLDSGDGVSHTVPIYEGYA
Sbjct: 140 AVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 172
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 181 bits (440), Expect = 4e-46
Identities = 81/91 (89%), Positives = 84/91 (92%)
Frame = +1
Query: 238 GTEGLFVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 417
G + +VGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTE 109
Query: 418 APLNPKANREXMTQIMFXTFNTPAMYVAIQA 510
APLNPKANRE MTQIMF TFN PAMYVAIQA
Sbjct: 110 APLNPKANREKMTQIMFETFNAPAMYVAIQA 140
Score = 92.3 bits (219), Expect = 2e-19
Identities = 41/50 (82%), Positives = 45/50 (90%)
Frame = +2
Query: 104 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 253
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDA 54
Score = 67.7 bits (158), Expect = 6e-12
Identities = 31/33 (93%), Positives = 32/33 (96%)
Frame = +3
Query: 507 SVLSLYASGRXTGIVLDSGDGVSHTVPIYEGYA 605
+VLSLYASGR TGIVLDSGDGVSHTVPIYEGYA
Sbjct: 140 AVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 172
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 181 bits (440), Expect = 4e-46
Identities = 81/91 (89%), Positives = 84/91 (92%)
Frame = +1
Query: 238 GTEGLFVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 417
G + +VGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTE 109
Query: 418 APLNPKANREXMTQIMFXTFNTPAMYVAIQA 510
APLNPKANRE MTQIMF TFN PAMYVAIQA
Sbjct: 110 APLNPKANREKMTQIMFETFNAPAMYVAIQA 140
Score = 92.3 bits (219), Expect = 2e-19
Identities = 41/50 (82%), Positives = 45/50 (90%)
Frame = +2
Query: 104 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 253
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDA 54
Score = 67.7 bits (158), Expect = 6e-12
Identities = 31/33 (93%), Positives = 32/33 (96%)
Frame = +3
Query: 507 SVLSLYASGRXTGIVLDSGDGVSHTVPIYEGYA 605
+VLSLYASGR TGIVLDSGDGVSHTVPIYEGYA
Sbjct: 140 AVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 172
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 180 bits (437), Expect = 9e-46
Identities = 79/86 (91%), Positives = 84/86 (97%)
Frame = +1
Query: 253 FVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP 432
+VGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNP
Sbjct: 55 YVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNP 114
Query: 433 KANREXMTQIMFXTFNTPAMYVAIQA 510
KANRE MTQIMF TFN+PAMYVAIQA
Sbjct: 115 KANREKMTQIMFETFNSPAMYVAIQA 140
Score = 87.8 bits (208), Expect = 5e-18
Identities = 37/50 (74%), Positives = 44/50 (88%)
Frame = +2
Query: 104 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 253
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDA 54
Score = 64.9 bits (151), Expect = 4e-11
Identities = 29/33 (87%), Positives = 32/33 (96%)
Frame = +3
Query: 507 SVLSLYASGRXTGIVLDSGDGVSHTVPIYEGYA 605
+VLSLYASGR TGIVLDSGDGVSHTVPIYEG++
Sbjct: 140 AVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFS 172
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 180 bits (437), Expect = 9e-46
Identities = 79/86 (91%), Positives = 84/86 (97%)
Frame = +1
Query: 253 FVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP 432
+VGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNP
Sbjct: 55 YVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNP 114
Query: 433 KANREXMTQIMFXTFNTPAMYVAIQA 510
KANRE MTQIMF TFN+PAMYVAIQA
Sbjct: 115 KANREKMTQIMFETFNSPAMYVAIQA 140
Score = 87.8 bits (208), Expect = 5e-18
Identities = 37/50 (74%), Positives = 44/50 (88%)
Frame = +2
Query: 104 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 253
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDA 54
Score = 64.9 bits (151), Expect = 4e-11
Identities = 29/33 (87%), Positives = 32/33 (96%)
Frame = +3
Query: 507 SVLSLYASGRXTGIVLDSGDGVSHTVPIYEGYA 605
+VLSLYASGR TGIVLDSGDGVSHTVPIYEG++
Sbjct: 140 AVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFS 172
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 180 bits (437), Expect = 9e-46
Identities = 79/86 (91%), Positives = 84/86 (97%)
Frame = +1
Query: 253 FVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP 432
+VGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNP
Sbjct: 55 YVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNP 114
Query: 433 KANREXMTQIMFXTFNTPAMYVAIQA 510
KANRE MTQIMF TFN+PAMYVAIQA
Sbjct: 115 KANREKMTQIMFETFNSPAMYVAIQA 140
Score = 87.8 bits (208), Expect = 5e-18
Identities = 37/50 (74%), Positives = 44/50 (88%)
Frame = +2
Query: 104 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 253
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDA 54
Score = 64.9 bits (151), Expect = 4e-11
Identities = 29/33 (87%), Positives = 32/33 (96%)
Frame = +3
Query: 507 SVLSLYASGRXTGIVLDSGDGVSHTVPIYEGYA 605
+VLSLYASGR TGIVLDSGDGVSHTVPIYEG++
Sbjct: 140 AVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFS 172
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 163 bits (395), Expect = 1e-40
Identities = 69/86 (80%), Positives = 79/86 (91%)
Frame = +1
Query: 253 FVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP 432
FVGDEAQ++RGIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPLNP
Sbjct: 56 FVGDEAQARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNP 115
Query: 433 KANREXMTQIMFXTFNTPAMYVAIQA 510
K NRE MTQIMF +F P+MY+ IQA
Sbjct: 116 KVNREKMTQIMFESFAFPSMYIGIQA 141
Score = 88.2 bits (209), Expect = 4e-18
Identities = 38/50 (76%), Positives = 45/50 (90%)
Frame = +2
Query: 104 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 253
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD+
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDT 55
Score = 66.5 bits (155), Expect = 1e-11
Identities = 30/33 (90%), Positives = 32/33 (96%)
Frame = +3
Query: 507 SVLSLYASGRXTGIVLDSGDGVSHTVPIYEGYA 605
+VLSLY+SGR TGIVLDSGDGVSHTVPIYEGYA
Sbjct: 141 AVLSLYSSGRTTGIVLDSGDGVSHTVPIYEGYA 173
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 157 bits (382), Expect = 4e-39
Identities = 67/87 (77%), Positives = 80/87 (91%)
Frame = +1
Query: 250 LFVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 429
LFVGD+A+++ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPVLLTEAPLN
Sbjct: 9 LFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPLN 68
Query: 430 PKANREXMTQIMFXTFNTPAMYVAIQA 510
PKA+RE MTQIMF TF P+MY+ +QA
Sbjct: 69 PKADREKMTQIMFETFAVPSMYIGMQA 95
Score = 53.6 bits (123), Expect = 1e-07
Identities = 25/33 (75%), Positives = 28/33 (84%)
Frame = +3
Query: 507 SVLSLYASGRXTGIVLDSGDGVSHTVPIYEGYA 605
+ LSL+ASGR TG VLDSGDGVS+ VPIYEG A
Sbjct: 95 AALSLHASGRTTGTVLDSGDGVSYIVPIYEGSA 127
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 151 bits (366), Expect = 3e-37
Identities = 69/96 (71%), Positives = 79/96 (82%)
Frame = +1
Query: 223 RDGRYGTEGLFVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 402
RDG E +VG+E + R ILTLK P+EHGIV NWDDMEKIWH+TFYNELRV PEEHP
Sbjct: 35 RDGLNPNES-YVGEEGHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHP 93
Query: 403 VLLTEAPLNPKANREXMTQIMFXTFNTPAMYVAIQA 510
VLLTEAP NPKANRE MTQIMF +F+ PAMYV++Q+
Sbjct: 94 VLLTEAPYNPKANREKMTQIMFESFDVPAMYVSMQS 129
Score = 57.2 bits (132), Expect = 8e-09
Identities = 25/33 (75%), Positives = 29/33 (87%)
Frame = +3
Query: 507 SVLSLYASGRXTGIVLDSGDGVSHTVPIYEGYA 605
SVL LY+SGR TG+VLD G+ VSHTVP+YEGYA
Sbjct: 129 SVLYLYSSGRTTGVVLDLGERVSHTVPVYEGYA 161
Score = 52.4 bits (120), Expect = 2e-07
Identities = 21/32 (65%), Positives = 26/32 (81%)
Frame = +2
Query: 119 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 214
+V D G GM +AGFAGD+AP+ VFP +VGRPR
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPR 35
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 98.7 bits (235), Expect = 3e-21
Identities = 40/87 (45%), Positives = 56/87 (64%)
Frame = +1
Query: 250 LFVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 429
+ VG+ R L + YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ PLN
Sbjct: 53 IVVGETCSELRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLN 112
Query: 430 PKANREXMTQIMFXTFNTPAMYVAIQA 510
P NRE M + MF +N +++ IQA
Sbjct: 113 PSKNREKMIETMFEKYNFAGVFIQIQA 139
Score = 51.2 bits (117), Expect = 5e-07
Identities = 20/33 (60%), Positives = 28/33 (84%)
Frame = +3
Query: 507 SVLSLYASGRXTGIVLDSGDGVSHTVPIYEGYA 605
+VL+LYA G TG+V+DSGDGV+H VP+ +GY+
Sbjct: 139 AVLTLYAQGLLTGLVIDSGDGVTHVVPVVDGYS 171
Score = 45.6 bits (103), Expect = 3e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +2
Query: 119 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 211
+V DNG+G K GFAG++ P +VFP +VGRP
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRP 37
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 92.7 bits (220), Expect = 2e-19
Identities = 43/89 (48%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Frame = +1
Query: 253 FVGDEAQSK-RGILT--LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP 423
++GDEA +K R T L YPIEHG V +WD ME+ W +N LR PE+H LLTE+P
Sbjct: 69 YIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTESP 128
Query: 424 LNPKANREXMTQIMFXTFNTPAMYVAIQA 510
L P +RE +I+F TFN P +Y+A+ +
Sbjct: 129 LTPPESREYTGEILFETFNVPGLYIAVNS 157
Score = 36.3 bits (80), Expect = 0.016
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +3
Query: 540 TGIVLDSGDGVSHTVPIYEGY 602
TG+V+D GDG +H VP+ EGY
Sbjct: 173 TGVVVDVGDGATHVVPVAEGY 193
Score = 35.9 bits (79), Expect = 0.021
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +2
Query: 116 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 202
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 79.8 bits (188), Expect = 1e-15
Identities = 35/85 (41%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Frame = +1
Query: 250 LFVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 426
L+VG +A S +R + + PI+ GIV++WD ++ IW H F + L + P EHP+LL E PL
Sbjct: 75 LYVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPL 134
Query: 427 NPKANREXMTQIMFXTFNTPAMYVA 501
N + RE ++MF + PA+++A
Sbjct: 135 NTQQQREKAAELMFEKYKVPALFMA 159
Score = 56.8 bits (131), Expect = 1e-08
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +2
Query: 104 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 205
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
Score = 33.9 bits (74), Expect = 0.084
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +3
Query: 510 VLSLYASGRXTGIVLDSGDGVSHTVPIYEGY 602
VL+ +A+GR T +V+D G G + P+++GY
Sbjct: 163 VLTSFATGRATSLVVDCGGGSTTISPVHDGY 193
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 65.7 bits (153), Expect = 2e-11
Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Frame = +1
Query: 226 DGRYGTEGLFVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 402
D G L+ G +A + +R + + P + GIVT+WD ++ +W H F N L + P EHP
Sbjct: 61 DKEKGKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHP 120
Query: 403 VLLTEAPLNPKANRE 447
+LL E PLN + RE
Sbjct: 121 MLLAEPPLNSQQQRE 135
Score = 57.2 bits (132), Expect = 8e-09
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = +2
Query: 104 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 205
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 54.0 bits (124), Expect = 7e-08
Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Frame = +1
Query: 304 PIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREXMTQIMFXTFN 480
PIE G++ +WD ME + + Y L E +L T+ PKA RE + Q+MF TFN
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116
Query: 481 TPAMYVAIQA 510
Y + QA
Sbjct: 117 VSGFYASEQA 126
Score = 33.1 bits (72), Expect = 0.15
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +3
Query: 507 SVLSLYASGRXTGIVLDSGDGVSHTVPIYEG 599
+VLSLYA GR +G +D G G P+ EG
Sbjct: 126 AVLSLYAVGRISGCTVDIGHGKIDIAPVLEG 156
Score = 27.5 bits (58), Expect = 7.3
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +2
Query: 116 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGR 208
ALVVD GS KAG A D +P + PS + R
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR 34
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 52.4 bits (120), Expect = 2e-07
Identities = 23/69 (33%), Positives = 40/69 (57%)
Frame = +1
Query: 295 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREXMTQIMFXT 474
++ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++F
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFED 120
Query: 475 FNTPAMYVA 501
F ++Y+A
Sbjct: 121 FGFSSLYIA 129
Score = 32.7 bits (71), Expect = 0.19
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +2
Query: 119 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 211
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 42.7 bits (96), Expect = 2e-04
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +2
Query: 119 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 220
+V+DNG+ + G+AG+ PR VF +IV RPRH+
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHK 55
Score = 42.3 bits (95), Expect = 2e-04
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +1
Query: 304 PIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREXMTQIMFXTFN 480
P + +V ++ ME I + F + +HP+L+TE NP +R M +++F T+
Sbjct: 85 PFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFETYG 144
Query: 481 TPAMYVAIQA 510
PA+ + A
Sbjct: 145 VPAVAFGVDA 154
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.9 bits (74), Expect = 0.084
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = -1
Query: 240 PIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 103
P P I P RGL +G T+ +SSPA+P + +P +ST + TS+
Sbjct: 290 PTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 28.3 bits (60), Expect = 4.2
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +3
Query: 507 SVLSLYASGRXTGIVLDSGDGVSHTVPIYEG 599
+VL+LYA+ R +GIV++ G V +PI G
Sbjct: 240 AVLALYAARRTSGIVVNIGFQVITILPILHG 270
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 28.3 bits (60), Expect = 4.2
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +3
Query: 507 SVLSLYASGRXTGIVLDSGDGVSHTVPIYEG 599
+VL+LYA+ R +GIV++ G V +PI G
Sbjct: 240 AVLALYAARRTSGIVVNIGFQVITILPILHG 270
>At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase,
putative / 3-PGDH, putative similar to SP:O04130 from
[Arabidopsis thaliana]
Length = 588
Score = 28.3 bits (60), Expect = 4.2
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = -2
Query: 350 IFSMSSQLVTIPCSMGYLRVRIPLLLCASSPTKSPSVP 237
IFS SS+LVT P S+ +R R ++L SS + P
Sbjct: 10 IFSSSSRLVTTPSSVFPIRQRRRIILVTSSSSGGGGKP 47
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.3 bits (60), Expect = 4.2
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +1
Query: 262 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 390
D A L++KY + H I + W + +IW L+ P
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP 211
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.3 bits (60), Expect = 4.2
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +1
Query: 262 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 390
D A L++KY + H I + W + +IW L+ P
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP 211
>At1g43245.1 68414.m04985 expressed protein
Length = 558
Score = 27.9 bits (59), Expect = 5.5
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -3
Query: 274 SVPHLLQRVLLSHTDHHALMAGPSHDRGEHGARSIIS 164
S PH L +L T+HH LMA PS H A + I+
Sbjct: 96 SSPHRLNNLL---TNHHLLMADPSISVAIHHAANFIA 129
>At5g64580.1 68418.m08116 AAA-type ATPase family protein similar to
zinc dependent protease [Arabidopsis thaliana]
GI:7650138; contains Pfam profile PF00004: ATPase AAA
family
Length = 855
Score = 27.5 bits (58), Expect = 7.3
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = +1
Query: 235 YGTEGLFVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN 372
Y +G +G+E SK+ I+ ++ ++ + W+D+ K H N
Sbjct: 180 YYKDGEPLGEEEDSKKEIIFRRHIVDRMPIDGWNDVWKKLHQQIVN 225
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.5 bits (58), Expect = 7.3
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -1
Query: 216 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 94
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At1g02110.1 68414.m00137 proline-rich family protein contains
proline-rich domain, INTERPRO:IPR000694
Length = 679
Score = 27.5 bits (58), Expect = 7.3
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -2
Query: 290 RIPLLLCASSPTKSPSVPYRPSRPDGGAFPRS 195
R+P +L SSP+ SP+ + P+ + RS
Sbjct: 107 RLPHILSDSSPSSSPATSFYPTAHQNSTYSRS 138
>At1g55420.1 68414.m06339 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 725
Score = 27.1 bits (57), Expect = 9.6
Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = -2
Query: 401 GCSSGATRSSL*K-V*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCASSPTKSPSVPY 234
GC S + S + + C+ F + + T+PC Y R PL LC + S Y
Sbjct: 529 GCGSDSCSSYFLECIKCKSF-LGIKCATLPCEAHYTHDRHPLTLCYEEEEDTTSGQY 584
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,562,542
Number of Sequences: 28952
Number of extensions: 293195
Number of successful extensions: 873
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 872
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1206913392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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