Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30096
(816 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g52280.1 68418.m06488 protein transport protein-related low s... 39 0.005
At2g25350.1 68415.m03032 phox (PX) domain-containing protein wea... 36 0.042
At5g25870.1 68418.m03069 hypothetical protein 33 0.17
At3g23930.1 68416.m03006 expressed protein 33 0.23
At3g51010.1 68416.m05585 expressed protein 33 0.30
At1g21630.1 68414.m02708 calcium-binding EF hand family protein ... 33 0.30
At2g18540.1 68415.m02160 cupin family protein contains Pfam prof... 32 0.40
At5g45520.1 68418.m05591 hypothetical protein 32 0.52
At4g39190.1 68417.m05549 expressed protein ; expression support... 32 0.52
At3g07780.1 68416.m00949 expressed protein 31 0.69
At2g39300.1 68415.m04825 expressed protein ; expression supporte... 31 0.69
At2g03150.1 68415.m00268 ATP/GTP-binding protein family contains... 31 0.69
At1g63300.1 68414.m07156 expressed protein similar to Intracellu... 31 0.91
At3g54670.1 68416.m06049 structural maintenance of chromosomes (... 31 1.2
At5g15920.1 68418.m01862 structural maintenance of chromosomes (... 30 1.6
At1g45545.1 68414.m05199 hypothetical protein contains Pfam prof... 30 1.6
At1g04160.1 68414.m00406 myosin family protein contains Pfam pro... 30 1.6
At4g24190.2 68417.m03473 shepherd protein (SHD) / clavata format... 30 2.1
At4g24190.1 68417.m03472 shepherd protein (SHD) / clavata format... 30 2.1
At3g05830.1 68416.m00654 expressed protein 30 2.1
At1g48280.1 68414.m05393 hydroxyproline-rich glycoprotein family... 30 2.1
At5g65770.1 68418.m08276 nuclear matrix constituent protein-rela... 29 2.8
At5g52640.1 68418.m06535 heat shock protein 81-1 (HSP81-1) / hea... 29 2.8
At5g24880.1 68418.m02946 expressed protein ; expression supporte... 29 2.8
At4g38070.1 68417.m05377 bHLH family protein contains Pfam profi... 29 2.8
At5g08080.1 68418.m00942 syntaxin, putative (SYP132) similar to ... 29 3.7
At5g05210.1 68418.m00555 nucleolar matrix protein-related contai... 29 3.7
At5g03660.1 68418.m00325 expressed protein low similarity to out... 29 3.7
At3g58940.1 68416.m06568 F-box family protein contains F-box dom... 29 3.7
At5g41540.1 68418.m05048 disease resistance protein (TIR-NBS-LRR... 29 4.9
At3g28770.1 68416.m03591 expressed protein 29 4.9
At1g01670.1 68414.m00085 U-box domain-containing protein 29 4.9
At5g42880.1 68418.m05226 hypothetical protein contains Pfam prof... 28 8.5
At5g08600.1 68418.m01023 U3 ribonucleoprotein (Utp) family prote... 28 8.5
At4g08180.3 68417.m01353 oxysterol-binding family protein simila... 28 8.5
At4g08180.2 68417.m01352 oxysterol-binding family protein simila... 28 8.5
At4g08180.1 68417.m01351 oxysterol-binding family protein simila... 28 8.5
At3g43160.1 68416.m04554 expressed protein merozoite surface pro... 28 8.5
At1g65470.1 68414.m07427 chromatin assembly factor-1 (FASCIATA1)... 28 8.5
At1g30650.1 68414.m03748 WRKY family transcription factor contai... 28 8.5
At1g05320.1 68414.m00539 myosin-related similar to non-muscle my... 28 8.5
>At5g52280.1 68418.m06488 protein transport protein-related low
similarity to SP|P25386 Intracellular protein transport
protein USO1 {Saccharomyces cerevisiae}
Length = 853
Score = 38.7 bits (86), Expect = 0.005
Identities = 34/118 (28%), Positives = 54/118 (45%), Gaps = 3/118 (2%)
Frame = +1
Query: 460 IEEKRQRLE-EAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLE- 633
++EK +RL E E K K N +Q K+ E + KEQ +
Sbjct: 583 LQEKCKRLSLEMESKLSEHENLTKKTLAEANNLRLQNKTLEEMQEKTHTEITQEKEQRKH 642
Query: 634 -EEKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYDLEERQKRQDYDLK 804
EEK +LS++++ L E L + KLR ++ ETEK E R++R +++ K
Sbjct: 643 VEEKNKALSMKVQMLESEVLKLTKLRDESS-----AAATETEKIIQEWRKERDEFERK 695
>At2g25350.1 68415.m03032 phox (PX) domain-containing protein weak
similarity to SP|Q9UTK5 Abnormal long morphology protein
1 (Sp8) {Schizosaccharomyces pombe}; contains Pfam
profile PF00787: PX domain
Length = 643
Score = 35.5 bits (78), Expect = 0.042
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Frame = +1
Query: 457 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 636
D+EE RQ+ E E K ++ D SKT N TI + E E + TK+QLE+
Sbjct: 455 DMEELRQKTFEMELKLKSKEDGSSD-SKTSGNSTISESHE------LLQEMDATKQQLED 507
Query: 637 --EKKISLSIRIK-PLTIEGLSVDKLRQKAQELWECIVKLETEKYDLEE 774
+ + L + K + + V LR+ E+ + + + TEK D E+
Sbjct: 508 LSRRYVELEAKSKADIKVLVREVKSLRRSHMEMEKELTRSLTEKSDTEK 556
>At5g25870.1 68418.m03069 hypothetical protein
Length = 173
Score = 33.5 bits (73), Expect = 0.17
Identities = 24/104 (23%), Positives = 51/104 (49%), Gaps = 6/104 (5%)
Frame = +1
Query: 514 LQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKKISLSIRIKP-LTIEGL 690
++ MK KT + ++ A++ ++ +E+++ ++ + K L IE
Sbjct: 1 MEDMKSLIKTSKELRKRIETRRENKEMAKMRETSDEKLIEKDEDVTKAGEFKEMLAIEKT 60
Query: 691 -----SVDKLRQKAQELWECIVKLETEKYDLEERQKRQDYDLKE 807
+ K + +E+ E +VKLE + Y+LEE + R++ +KE
Sbjct: 61 WQIWEELLKEHDEFEEISEILVKLEKKYYELEEVENRENLQMKE 104
>At3g23930.1 68416.m03006 expressed protein
Length = 224
Score = 33.1 bits (72), Expect = 0.23
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 190 KPAPKQEGEGDPEFIKRQDQKRSDLDEQLKEYINEWRKQR 309
K K + G IK +D++ + QLKE EWRK+R
Sbjct: 17 KETSKDQSRGRRHLIKERDEREKVMFLQLKEAEREWRKER 56
>At3g51010.1 68416.m05585 expressed protein
Length = 188
Score = 32.7 bits (71), Expect = 0.30
Identities = 22/66 (33%), Positives = 34/66 (51%)
Frame = +1
Query: 460 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEE 639
I ++R + +KKRQA++Q K + +++K A ER +QLEEE
Sbjct: 125 IGQRRAFILSEKKKRQALVQEAKRKKRIKQ---VERKMAAVARDRAWAERLIELQQLEEE 181
Query: 640 KKISLS 657
KK S+S
Sbjct: 182 KKKSMS 187
>At1g21630.1 68414.m02708 calcium-binding EF hand family protein
contains INTERPRO:IPR002048 calcium-binding EF-hand
domain; ESTs gb|T44428 and gb|AA395440 come from this
gene
Length = 1218
Score = 32.7 bits (71), Expect = 0.30
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Frame = +1
Query: 604 ERNKTKEQLEEEKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYD---LEE 774
E ++ EE+ K S ++ K LTIE + +++K EL++ IVK E K D ++E
Sbjct: 656 ELESLAKKYEEKYKKSGNVGSK-LTIEEATFRDIQEKKMELYQAIVKFEEGKLDDSIVKE 714
Query: 775 RQKRQDYDLKEL 810
R + L+EL
Sbjct: 715 RTEHIQSGLEEL 726
>At2g18540.1 68415.m02160 cupin family protein contains Pfam profile
PF00190: Cupin
Length = 707
Score = 32.3 bits (70), Expect = 0.40
Identities = 26/118 (22%), Positives = 58/118 (49%)
Frame = +1
Query: 463 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEK 642
EE+++R EEAE+ R+ + K+ +++ E + + E + K + EE +
Sbjct: 504 EERKKREEEAEQARKREEEREKEEEMAKKREEERQRKEREEVERKRREEQERKRREEEAR 563
Query: 643 KISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYDLEERQKRQDYDLKELKE 816
K + + + ++ R++ +E+ E ++ E E+ EE KR++ + ++ KE
Sbjct: 564 KREEERKREEEMAKRREQERQRKEREEV-ERKIREEQERKREEEMAKRREQE-RQKKE 619
Score = 28.3 bits (60), Expect = 6.4
Identities = 28/122 (22%), Positives = 56/122 (45%), Gaps = 5/122 (4%)
Frame = +1
Query: 466 EKRQRLEE-AEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEK 642
E+R++ EE A K+ +A + ++A + T +KK E + ER + +E+ + +
Sbjct: 444 ERRRKEEEEARKREEAKRREEEEAKRREEEETERKKREEEEARKREEERKREEEEAKRRE 503
Query: 643 KISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYDLE----ERQKRQDYDLKEL 810
+ K E K ++ ++ E K E E+ E ER++R++ + K
Sbjct: 504 E-----ERKKREEEAEQARKREEEREKEEEMAKKREEERQRKEREEVERKRREEQERKRR 558
Query: 811 KE 816
+E
Sbjct: 559 EE 560
>At5g45520.1 68418.m05591 hypothetical protein
Length = 1167
Score = 31.9 bits (69), Expect = 0.52
Identities = 30/122 (24%), Positives = 58/122 (47%), Gaps = 5/122 (4%)
Frame = +1
Query: 457 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENF-----GLSNAQLERNKTK 621
++E+ ++ E E++ + +++ KT P+ +K +N G SN + + +K K
Sbjct: 624 NLEDGKKHDEGKEERSLKSDEVVEEEKKTSPSEEATEKFQNKPGDQKGKSNVEGDGDKGK 683
Query: 622 EQLEEEKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYDLEERQKRQDYDL 801
LEEEKK K + E + +K ++ E + E DL+E +KR + +
Sbjct: 684 ADLEEEKKQDEVEAEKSKSDEIVEGEKKPDDKSKV-EKKGDGDKENADLDEGKKRDEVEA 742
Query: 802 KE 807
K+
Sbjct: 743 KK 744
>At4g39190.1 68417.m05549 expressed protein ; expression supported
by MPSS
Length = 277
Score = 31.9 bits (69), Expect = 0.52
Identities = 26/108 (24%), Positives = 52/108 (48%)
Frame = +1
Query: 472 RQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKKIS 651
+ + EK+ +A +A + ++ +K+S + KTK ++ EKK+
Sbjct: 119 QDEMRSGEKQSEAENEAKQSITENKAKENEEKQSITESRVKKSVTEKKTK-RIISEKKVK 177
Query: 652 LSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYDLEERQKRQDY 795
S + + LT + SV+ R+K E+ + + EK +L E+++ Q Y
Sbjct: 178 QS-KPEKLTKQSTSVN--REKQSEVEHKDITMTIEKQNLTEKRQIQSY 222
>At3g07780.1 68416.m00949 expressed protein
Length = 566
Score = 31.5 bits (68), Expect = 0.69
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Frame = +1
Query: 586 LSNAQLERNKTKEQLEEEKKISLSIRIKPLTIE--GLSVDKLRQKAQELWECIVKLETEK 759
++ Q+ER K K+Q+EE ++I +R+K E L ++ + +A+ L E IVK + EK
Sbjct: 434 VAELQMERQKKKQQIEEVERI---VRLKQAEAEMFQLKANEAKVEAERL-ERIVKAKKEK 489
Query: 760 YDLE 771
+ E
Sbjct: 490 TEEE 493
>At2g39300.1 68415.m04825 expressed protein ; expression supported
by MPSS
Length = 768
Score = 31.5 bits (68), Expect = 0.69
Identities = 19/106 (17%), Positives = 57/106 (53%), Gaps = 6/106 (5%)
Frame = +1
Query: 517 QAMKDASKTGPNFTIQKKSE-----NFGLSNAQLERNKTKEQLEEEKKIS-LSIRIKPLT 678
+++K + +T + ++K +E S+A +++ E +++++ I+ + I ++
Sbjct: 625 ESLKRSLQTVTSLLLEKSNEMASNSESSCSSAARPSSRSVEMVKKDENINRMEINLQEAA 684
Query: 679 IEGLSVDKLRQKAQELWECIVKLETEKYDLEERQKRQDYDLKELKE 816
E L++ K+ ++ +E+W+ + + DLE ++ +++L+E
Sbjct: 685 KELLTLPKVLEEREEMWKEVKECRKRNMDLESEKEMLKKKVEKLEE 730
>At2g03150.1 68415.m00268 ATP/GTP-binding protein family contains
ATP/GTP-binding site motif A (P-loop), PROSITE:PS00017
Length = 1340
Score = 31.5 bits (68), Expect = 0.69
Identities = 22/89 (24%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Frame = +1
Query: 460 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNA-QLERNKTKEQLEE 636
++ K++ KK++ + K +KTG + +KK+ + +S +++RN T E+ +
Sbjct: 898 VDVKQETGSPDTKKKEGASSSSKKDTKTGEDKKAEKKNNSETMSEGKKIDRNNTDEKEVK 957
Query: 637 EKKISLSIRIKPLTIEGLSVDKLRQKAQE 723
EK I+ + E K R+K +E
Sbjct: 958 EKVTEKEIKERGGKDESRIQVKDRKKCEE 986
>At1g63300.1 68414.m07156 expressed protein similar to Intracellular
protein transport protein USO1 (Swiss-Prot:P25386)
[Saccharomyces cerevisiae]; similar to Myosin II heavy
chain, non muscle (Swiss-Prot:P08799) [Dictyostelium
discoideum]
Length = 1029
Score = 31.1 bits (67), Expect = 0.91
Identities = 26/108 (24%), Positives = 48/108 (44%), Gaps = 2/108 (1%)
Frame = +1
Query: 460 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEE 639
+ E ++L + + ML+ + + S N QK+ E +N E KE++E
Sbjct: 684 LHELSEKLSFKTSQMERMLENLDEKSNEIDN---QKRHEEDVTANLNQEIKILKEEIENL 740
Query: 640 KKISLSIRIKPLTIEGLSVD--KLRQKAQELWECIVKLETEKYDLEER 777
KK S+ ++ E L VD K ++ E + + +K +LE +
Sbjct: 741 KKNQDSLMLQAEQAENLRVDLEKTKKSVMEAEASLQRENMKKIELESK 788
>At3g54670.1 68416.m06049 structural maintenance of chromosomes
(SMC) family protein similar to SMC1 protein [Bos
taurus] GI:4235253, 14S cohesin SMC1 subunit (SMC
protein) [Xenopus laevis] GI:3328231; contains Pfam
profiles PF02483: SMC family C-terminal domain, PF02463:
RecF/RecN/SMC N terminal domain
Length = 1257
Score = 30.7 bits (66), Expect = 1.2
Identities = 29/129 (22%), Positives = 61/129 (47%), Gaps = 12/129 (9%)
Frame = +1
Query: 466 EKRQRLEEAEK--KRQAMLQAM----KDASKTGPNFTIQKKSENFGLSNAQ-LERNKTKE 624
EK RL+E K KR+ L + D K + +K + + + ER K
Sbjct: 217 EKHLRLQEELKALKRERFLWQLYNIENDIEKANEDVDSEKSNRKDVMRELEKFEREAGKR 276
Query: 625 QLEEEKKIS-LSIRIKPLTIEGLSVDKLRQKA----QELWECIVKLETEKYDLEERQKRQ 789
++E+ K + ++ R K + + + K++ + +E+ K+ET + D+++R+K +
Sbjct: 277 KVEQAKYLKEIAQREKKIAEKSSKLGKIQPELLRFKEEIARIKAKIETNRKDVDKRKKEK 336
Query: 790 DYDLKELKE 816
KE+++
Sbjct: 337 GKHSKEIEQ 345
>At5g15920.1 68418.m01862 structural maintenance of chromosomes (SMC)
family protein (MSS2) similar to SMC-related protein MSS2
[Arabidopsis thaliana] GI:9965743; contains Pfam profiles
PF02483: SMC family C-terminal domain, PF02463:
RecF/RecN/SMC N terminal domain
Length = 1053
Score = 30.3 bits (65), Expect = 1.6
Identities = 31/108 (28%), Positives = 47/108 (43%)
Frame = +1
Query: 484 EEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKKISLSIR 663
+E E K+Q + A +DA T + K E +E T E+LE + +LS
Sbjct: 778 KEVEGKQQRLATAKRDAESVA-TITPELKKEF-------MEMPTTVEELEAAIQDNLSQA 829
Query: 664 IKPLTIEGLSVDKLRQKAQELWECIVKLETEKYDLEERQKRQDYDLKE 807
L I + + + +++ KLET+K DL K D LKE
Sbjct: 830 NSILFINENILQEYEHRQSQIYTISTKLETDKRDLSICMKEID-SLKE 876
>At1g45545.1 68414.m05199 hypothetical protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827)
Length = 752
Score = 30.3 bits (65), Expect = 1.6
Identities = 21/70 (30%), Positives = 37/70 (52%)
Frame = +1
Query: 604 ERNKTKEQLEEEKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYDLEERQK 783
E K +E + + KK ++ + + +++ R +EL KLE EK + EE+Q
Sbjct: 194 ELEKIQEDMPDYKKQAVVAEEAKHQVV-MELERTRNVVEEL-----KLELEKAEKEEQQA 247
Query: 784 RQDYDLKELK 813
+QD DL +L+
Sbjct: 248 KQDSDLAKLR 257
>At1g04160.1 68414.m00406 myosin family protein contains Pfam
profiles: PF02736 myosin N-terminal SH3-like domain,
PF00063 myosin head (motor domain), PF00612 IQ
calmodulin-binding motif, PF01843: DIL domain
Length = 1500
Score = 30.3 bits (65), Expect = 1.6
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Frame = +1
Query: 487 EAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGL----SNAQLERNKTKEQLEEEKKISL 654
EA K +L +K+ + +EN L S+ +++ ++T ++L E +IS
Sbjct: 949 EAAKTVSEVLPIIKEVPVVDQELMEKLTNENEKLKGMVSSLEIKIDETAKELHETARISQ 1008
Query: 655 SIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEK 759
R+K V KL+ Q L E I +ETEK
Sbjct: 1009 D-RLKQALAAESKVAKLKTAMQRLEEKISDMETEK 1042
>At4g24190.2 68417.m03473 shepherd protein (SHD) / clavata formation
protein, putative nearly identical to SHEPHERD
[Arabidopsis thaliana] GI:19570872; contains Pfam
profiles PF02518: ATPase, histidine kinase-, DNA gyrase
B-, and HSP90-like domain protein, PF00183: Hsp90
protein
Length = 823
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -1
Query: 762 VFLGLEFDDALPEFLGLLSEFVDGET 685
VF+ EFD+ LP++L L VD +T
Sbjct: 423 VFISDEFDELLPKYLSFLKGLVDSDT 448
>At4g24190.1 68417.m03472 shepherd protein (SHD) / clavata formation
protein, putative nearly identical to SHEPHERD
[Arabidopsis thaliana] GI:19570872; contains Pfam
profiles PF02518: ATPase, histidine kinase-, DNA gyrase
B-, and HSP90-like domain protein, PF00183: Hsp90
protein
Length = 823
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -1
Query: 762 VFLGLEFDDALPEFLGLLSEFVDGET 685
VF+ EFD+ LP++L L VD +T
Sbjct: 423 VFISDEFDELLPKYLSFLKGLVDSDT 448
>At3g05830.1 68416.m00654 expressed protein
Length = 336
Score = 29.9 bits (64), Expect = 2.1
Identities = 35/131 (26%), Positives = 69/131 (52%), Gaps = 15/131 (11%)
Frame = +1
Query: 469 KRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLER-NKTKEQLEEE-K 642
++Q EE + + + +A+ A G + +QK E+ +S + ER N+ E +EE
Sbjct: 167 EKQLREEVRRIEREVTEAIAKAGIGGMDSELQKLLED--VSPMKFERMNRLVEVKDEEIT 224
Query: 643 KISLSIRI-----KPLTIEGLS-VDKLRQKAQELWECIVKLE-------TEKYDLEERQK 783
K+ IR+ K T E S ++K R+ Q+L + ++KLE ++ L+ + +
Sbjct: 225 KLKDEIRLMSGQWKHKTKELESQLEKQRRTDQDLKKKVLKLEFCLQEARSQTRKLQRKGE 284
Query: 784 RQDYDLKELKE 816
R+D ++KE+++
Sbjct: 285 RRDMEIKEIRD 295
>At1g48280.1 68414.m05393 hydroxyproline-rich glycoprotein family
protein
Length = 558
Score = 29.9 bits (64), Expect = 2.1
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Frame = +1
Query: 463 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTK---EQLE 633
+EKR+R+EE E+K +KD N ++ + E SN +LE N K + +
Sbjct: 112 DEKRKRMEELEEKLVVNESLIKDLQLQVLN--LKTELEEARNSNVELELNNRKLSQDLVS 169
Query: 634 EEKKI-SLSIRIKP 672
E KI SLS KP
Sbjct: 170 AEAKISSLSSNDKP 183
>At5g65770.1 68418.m08276 nuclear matrix constituent protein-related
low similarity to nuclear matrix constituent protein 1
(NMCP1) [Daucus carota] GI:2190187
Length = 1042
Score = 29.5 bits (63), Expect = 2.8
Identities = 31/123 (25%), Positives = 60/123 (48%), Gaps = 4/123 (3%)
Frame = +1
Query: 460 IEEKRQRLEEA-EKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 636
IE +++ LE E KR+ + + +D K F +KK E + + + K E ++
Sbjct: 648 IEMQKRELEYCIENKREELENSSRDREKA---FEQEKKLEEERIQSLKEMAEKELEHVQV 704
Query: 637 EKKISLSIRIK-PLTIEGLSVD--KLRQKAQELWECIVKLETEKYDLEERQKRQDYDLKE 807
E K + R++ L E + +L+ +EL KLET+++ L + ++++E
Sbjct: 705 ELKRLDAERLEIKLDRERREREWAELKDSVEELKVQREKLETQRHMLRAERDEIRHEIEE 764
Query: 808 LKE 816
LK+
Sbjct: 765 LKK 767
>At5g52640.1 68418.m06535 heat shock protein 81-1 (HSP81-1) / heat
shock protein 83 (HSP83) nearly identical to SP|P27323
Heat shock protein 81-1 (HSP81-1) (Heat shock protein
83) {Arabidopsis thaliana}; contains Pfam profiles
PF02518: ATPase, histidine kinase-, DNA gyrase B-, and
HSP90-like domain protein, PF00183: Hsp90 protein
Length = 705
Score = 29.5 bits (63), Expect = 2.8
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +1
Query: 199 PKQEGEGDPEFIKRQDQKRSDLDEQLKEYINEW 297
PK+E EG+ E + + +K +++KE +EW
Sbjct: 232 PKKENEGEVEEVDEEKEKDGKKKKKIKEVSHEW 264
>At5g24880.1 68418.m02946 expressed protein ; expression supported
by MPSS
Length = 443
Score = 29.5 bits (63), Expect = 2.8
Identities = 22/88 (25%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Frame = +1
Query: 559 IQKKSENFGLSNAQLERNKTKEQLEEEKKISLSIRIKPLTIEGLSVDKLRQKAQELWECI 738
I++K+E + + NK++E+ + +KKI + + + E V+ + + QE E +
Sbjct: 281 IEEKTEEMKEQDNN-QANKSEEEEDVKKKIDENETPEKVDTESKEVESVEETTQEKEEEV 339
Query: 739 VKLETEKYDLEERQKR--QDYDLKELKE 816
+ E+ + EE++K ++ D KE E
Sbjct: 340 KEEGKERVEEEEKEKEKVKEDDQKEKVE 367
>At4g38070.1 68417.m05377 bHLH family protein contains Pfam profile:
PF00010 helix-loop-helix DNA-binding domain; PMID:
12679534; putative bHLH131 transcription factor
Length = 1513
Score = 29.5 bits (63), Expect = 2.8
Identities = 27/113 (23%), Positives = 56/113 (49%)
Frame = +1
Query: 478 RLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKKISLS 657
+ E E++++ M+ + +AS+ N +++K+ + A++E K + E K+I
Sbjct: 102 KYREFEEEKRNMMSGLDEASEK--NIDLEQKNNVY---RAEIEGLKGLLAVAETKRIEAE 156
Query: 658 IRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYDLEERQKRQDYDLKELKE 816
T++G+ + R + +VK+E EK +EE+ K + K L+E
Sbjct: 157 -----KTVKGMKEMRGRD------DVVVKMEEEKSQVEEKLKWKKEQFKHLEE 198
>At5g08080.1 68418.m00942 syntaxin, putative (SYP132) similar to
SP|Q9ZSD4 Syntaxin 121 (AtSYP121) (Syntaxin-related
protein At-Syr1) {Arabidopsis thaliana}
Length = 304
Score = 29.1 bits (62), Expect = 3.7
Identities = 24/83 (28%), Positives = 40/83 (48%)
Frame = +1
Query: 460 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEE 639
I+++ +L++ KK QA + K +K I+K E + R K +LEE
Sbjct: 44 IDKQYDKLDKLLKKLQASHEESKSVTKAPAMKAIKKTMEKDVDEVGSIARF-IKGKLEEL 102
Query: 640 KKISLSIRIKPLTIEGLSVDKLR 708
+ +L+ R KP +G VD+ R
Sbjct: 103 DRENLANRQKPGCAKGSGVDRSR 125
>At5g05210.1 68418.m00555 nucleolar matrix protein-related contains
Pfam domain, PF04935: Surfeit locus protein 6
Length = 386
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/59 (20%), Positives = 33/59 (55%)
Frame = +1
Query: 472 RQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKKI 648
+Q + + +K+++ + K+ + F ++K+ + G ++E+NK ++ + EKK+
Sbjct: 310 KQSIHKDKKRQEKNAEKWKERIEGQQKFKVEKQQKRSGNIADRIEQNKMRKIAKREKKL 368
>At5g03660.1 68418.m00325 expressed protein low similarity to outer
surface protein F [Borrelia burgdorferi] GI:466482;
contains Pfam profile PF04949: Family of unknown
function (DUF662)
Length = 173
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +1
Query: 523 MKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKKISLSIRIK 669
+KD +F+ Q K E+ LS L K KE+ E+KK+ + R++
Sbjct: 18 LKDQLSESMSFSSQMKKEDDELSMKALSAFKAKEEEIEKKKMEIRERVQ 66
>At3g58940.1 68416.m06568 F-box family protein contains F-box domain
Pfam:PF00646
Length = 618
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = +1
Query: 718 QELWECIVKLETEKYDLEERQKRQDYDLKELKE 816
QE+ + ++++ E DL+ERQ+ Q+ L +LKE
Sbjct: 486 QEMSQDYLQMQLEVADLKERQRDQEAKLADLKE 518
>At5g41540.1 68418.m05048 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1038
Score = 28.7 bits (61), Expect = 4.9
Identities = 19/50 (38%), Positives = 24/50 (48%)
Frame = +1
Query: 457 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLE 606
D EKRQ L EAE+ R + S G +F + K SE F +S E
Sbjct: 502 DEPEKRQFLVEAEEIRDVLANETGTGSVLGISFDMSKVSE-FSISGRAFE 550
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 28.7 bits (61), Expect = 4.9
Identities = 25/118 (21%), Positives = 56/118 (47%), Gaps = 1/118 (0%)
Frame = +1
Query: 457 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 636
+++++ +E K + L+ +K + S+N + +++KTKE+ ++
Sbjct: 970 ELKKQEDNKKETTKSENSKLKEENKDNKEKKE-SEDSASKNREKKEYEEKKSKTKEEAKK 1028
Query: 637 EKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLET-EKYDLEERQKRQDYDLKE 807
EKK S + + E K ++++++L + ET EK + E + ++ D KE
Sbjct: 1029 EKKKSQDKKREEKDSEERKSKKEKEESRDLKAKKKEEETKEKKESENHKSKKKEDKKE 1086
>At1g01670.1 68414.m00085 U-box domain-containing protein
Length = 365
Score = 28.7 bits (61), Expect = 4.9
Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Frame = +1
Query: 463 EEKRQRLEEAEKKRQ-----AMLQAMKDASKTGPNFT-IQKKSENFGLSNAQLERNKTKE 624
EE+R+RLE E KR+ M + ++A + T I E + E N+ K
Sbjct: 177 EEQRRRLEIEELKREKEQRDKMRRVREEALSSSSGVTKILYNEEVMRRREVEAELNRAKA 236
Query: 625 QLEEEKKISLSIR 663
++E+ K++ + ++
Sbjct: 237 EIEDMKRVQIELK 249
>At5g42880.1 68418.m05226 hypothetical protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827)
Length = 751
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +1
Query: 739 VKLETEKYDLEERQKRQDYDLKELK 813
+KLE EK + EE+Q +QD +L +++
Sbjct: 212 LKLELEKAEKEEQQAKQDSELAQMR 236
>At5g08600.1 68418.m01023 U3 ribonucleoprotein (Utp) family protein
contains Pfam profile: PF04615 Utp14 protein
Length = 822
Score = 27.9 bits (59), Expect = 8.5
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Frame = +1
Query: 484 EEAEKKRQAMLQAMKDASKTGPNFT--IQKKSENFGLSNAQLERNKTKEQLEEEKKISLS 657
EEA+K R+ L+ KDAS + + KK+E + +KE E+ ++ +
Sbjct: 710 EEAKKTREQALRKRKDASFKHVIISEKVDKKAEKLQTKSLPYPYT-SKEVFEQSMRMPIG 768
Query: 658 IRIKPLTIEGL 690
P TI G+
Sbjct: 769 PEFNPTTIVGV 779
>At4g08180.3 68417.m01353 oxysterol-binding family protein similar
to SP|Q969R2 Oxysterol-binding protein 2 {Homo sapiens};
contains Pfam profiles PF00169: PH domain, PF01237:
Oxysterol-binding protein
Length = 813
Score = 27.9 bits (59), Expect = 8.5
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
Frame = +1
Query: 514 LQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKKISLSIRIKPLTIEGLS 693
LQA+KD N + + N +S ++ R + E+ E I +I L
Sbjct: 230 LQAVKDMFPRMSNSELMAPTNNLAMSTEKI-RLRLIEEGVSELAIQDCEQIMKSEFSALQ 288
Query: 694 VDK--LRQKAQELWECIVKLETEKYDLE 771
L+QK L + + +LETEK DLE
Sbjct: 289 SQLVLLKQKQWLLIDTLRQLETEKVDLE 316
>At4g08180.2 68417.m01352 oxysterol-binding family protein similar
to SP|Q969R2 Oxysterol-binding protein 2 {Homo sapiens};
contains Pfam profiles PF00169: PH domain, PF01237:
Oxysterol-binding protein
Length = 813
Score = 27.9 bits (59), Expect = 8.5
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
Frame = +1
Query: 514 LQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKKISLSIRIKPLTIEGLS 693
LQA+KD N + + N +S ++ R + E+ E I +I L
Sbjct: 230 LQAVKDMFPRMSNSELMAPTNNLAMSTEKI-RLRLIEEGVSELAIQDCEQIMKSEFSALQ 288
Query: 694 VDK--LRQKAQELWECIVKLETEKYDLE 771
L+QK L + + +LETEK DLE
Sbjct: 289 SQLVLLKQKQWLLIDTLRQLETEKVDLE 316
>At4g08180.1 68417.m01351 oxysterol-binding family protein similar
to SP|Q969R2 Oxysterol-binding protein 2 {Homo sapiens};
contains Pfam profiles PF00169: PH domain, PF01237:
Oxysterol-binding protein
Length = 814
Score = 27.9 bits (59), Expect = 8.5
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
Frame = +1
Query: 514 LQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKKISLSIRIKPLTIEGLS 693
LQA+KD N + + N +S ++ R + E+ E I +I L
Sbjct: 230 LQAVKDMFPRMSNSELMAPTNNLAMSTEKI-RLRLIEEGVSELAIQDCEQIMKSEFSALQ 288
Query: 694 VDK--LRQKAQELWECIVKLETEKYDLE 771
L+QK L + + +LETEK DLE
Sbjct: 289 SQLVLLKQKQWLLIDTLRQLETEKVDLE 316
>At3g43160.1 68416.m04554 expressed protein merozoite surface
protein 2 (MSP-2), EMBL:PFU72951, Plasmodium falciparum
Length = 295
Score = 27.9 bits (59), Expect = 8.5
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 230 SSSVKTRSGRTWMNS*RNTSTNGANSGPRRRMSSNALKRSR 352
+S+ +TRSGR +++ +ST NS R SS K R
Sbjct: 103 NSTTRTRSGRGFIDYVLESSTGTENSSTRTAESSTRTKNGR 143
>At1g65470.1 68414.m07427 chromatin assembly factor-1 (FASCIATA1)
(FAS1) identical to FAS1 [Arabidopsis thaliana]
GI:4887626
Length = 815
Score = 27.9 bits (59), Expect = 8.5
Identities = 20/73 (27%), Positives = 41/73 (56%)
Frame = +1
Query: 598 QLERNKTKEQLEEEKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETEKYDLEER 777
++ER KE+L++EK+ L ++ VD+ K +E E +++ ++ + E+
Sbjct: 265 RMERQVLKEKLQQEKEQKL--------LQKAIVDE-NNKEKEETESRKRIKKQQDESEKE 315
Query: 778 QKRQDYDLKELKE 816
QKR++ + ELK+
Sbjct: 316 QKRREKEQAELKK 328
>At1g30650.1 68414.m03748 WRKY family transcription factor
contains Pfam profile: PF03106 WRKY DNA -binding domain
Length = 430
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1
Query: 1 GSAAAAPRTPHSNVAVLPVQEPVPS 75
G +P TP SN+ LP+ P PS
Sbjct: 25 GGHVLSPETPPSNIWPLPLSHPTPS 49
>At1g05320.1 68414.m00539 myosin-related similar to non-muscle
myosin II heavy chain (GI:19879404) [Loligo pealei];
ESTs gb|AA042402,gb|ATTS1380 come from this gene
Length = 828
Score = 27.9 bits (59), Expect = 8.5
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Frame = +1
Query: 460 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKT---KEQL 630
+E+K + LEE +K + A+ A + G +IQ + +S + N++ +L
Sbjct: 155 LEQKLKSLEELSEKVSELKSALIVAEEEGKKSSIQMQEYQEKVSKLESSLNQSSARNSEL 214
Query: 631 EEEKKISL 654
EE+ +I+L
Sbjct: 215 EEDLRIAL 222
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.313 0.130 0.360
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,688,874
Number of Sequences: 28952
Number of extensions: 205515
Number of successful extensions: 788
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 741
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 786
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1863090400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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