Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30090
(852 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g18540.1 68415.m02160 cupin family protein contains Pfam prof... 39 0.004
At5g52280.1 68418.m06488 protein transport protein-related low s... 37 0.020
At5g25870.1 68418.m03069 hypothetical protein 34 0.14
At1g45545.1 68414.m05199 hypothetical protein contains Pfam prof... 33 0.24
At3g51010.1 68416.m05585 expressed protein 33 0.32
At2g03150.1 68415.m00268 ATP/GTP-binding protein family contains... 31 0.74
At5g58630.1 68418.m07347 expressed protein 31 1.3
At3g58940.1 68416.m06568 F-box family protein contains F-box dom... 31 1.3
At2g25350.1 68415.m03032 phox (PX) domain-containing protein wea... 31 1.3
At5g45520.1 68418.m05591 hypothetical protein 30 2.2
At5g08080.1 68418.m00942 syntaxin, putative (SYP132) similar to ... 30 2.2
At1g48280.1 68414.m05393 hydroxyproline-rich glycoprotein family... 30 2.2
At3g25840.1 68416.m03219 protein kinase family protein contains ... 29 3.0
At3g18480.1 68416.m02348 CCAAT displacement protein-related / CD... 29 3.0
At1g53250.1 68414.m06034 expressed protein 29 3.0
At5g13800.2 68418.m01610 hydrolase, alpha/beta fold family prote... 29 3.9
At5g13800.1 68418.m01609 hydrolase, alpha/beta fold family prote... 29 3.9
At5g05210.1 68418.m00555 nucleolar matrix protein-related contai... 29 3.9
At5g03660.1 68418.m00325 expressed protein low similarity to out... 29 3.9
At3g23930.1 68416.m03006 expressed protein 29 3.9
At5g42880.1 68418.m05226 hypothetical protein contains Pfam prof... 29 5.2
At5g41540.1 68418.m05048 disease resistance protein (TIR-NBS-LRR... 29 5.2
At3g43160.1 68416.m04554 expressed protein merozoite surface pro... 29 5.2
At3g28770.1 68416.m03591 expressed protein 29 5.2
At1g67230.1 68414.m07652 expressed protein 29 5.2
At1g63300.1 68414.m07156 expressed protein similar to Intracellu... 29 5.2
At1g01670.1 68414.m00085 U-box domain-containing protein 29 5.2
At3g28270.2 68416.m03531 expressed protein similar to At14a prot... 28 6.9
At3g28270.1 68416.m03530 expressed protein similar to At14a prot... 28 6.9
At3g07780.1 68416.m00949 expressed protein 28 6.9
At1g73860.1 68414.m08552 kinesin motor protein-related similar t... 28 6.9
At1g29940.1 68414.m03658 DNA-directed RNA polymerase family prot... 28 6.9
At5g08600.1 68418.m01023 U3 ribonucleoprotein (Utp) family prote... 28 9.1
At2g48120.1 68415.m06024 pale cress protein (PAC) identical to P... 28 9.1
At2g29210.1 68415.m03550 splicing factor PWI domain-containing p... 28 9.1
At1g05320.1 68414.m00539 myosin-related similar to non-muscle my... 28 9.1
>At2g18540.1 68415.m02160 cupin family protein contains Pfam profile
PF00190: Cupin
Length = 707
Score = 39.1 bits (87), Expect = 0.004
Identities = 31/133 (23%), Positives = 60/133 (45%), Gaps = 2/133 (1%)
Frame = +1
Query: 454 EEKRQRLEEAEKKRQAMLQAMK--DASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 627
E KR+ EE E+K++ +A K + K +++ E + K +E+ E+
Sbjct: 466 EAKRREEEETERKKREEEEARKREEERKREEEEAKRREEERKKREEEAEQARKREEEREK 525
Query: 628 EKKISLSIRIKPLTIEGLSVDKLRQKAQELLGVHRQTRDREIRSRREAKETGLRLKRAQR 807
E++++ + E V++ R++ QE + R RE +RE + R + QR
Sbjct: 526 EEEMAKKREEERQRKEREEVERKRREEQERKRREEEARKREEERKREEEMAKRREQERQR 585
Query: 808 KTKAATEAQSSQE 846
K + E + +E
Sbjct: 586 KEREEVERKIREE 598
Score = 33.5 bits (73), Expect = 0.18
Identities = 32/136 (23%), Positives = 63/136 (46%), Gaps = 6/136 (4%)
Frame = +1
Query: 457 EKRQRLEE-AEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQL---E 624
E+R++ EE A K+ +A + ++A + T +KK E + ER + +E+ E
Sbjct: 444 ERRRKEEEEARKREEAKRREEEEAKRREEEETERKKREEEEARKREEERKREEEEAKRRE 503
Query: 625 EEKKISLSIRIKPLTIEGLSVDKLRQKAQELLGVHRQTRDREIRS--RREAKETGLRLKR 798
EE+K + + + ++ R+K +E+ + R R+ R R+ +E R +R
Sbjct: 504 EERK-----KREEEAEQARKREEEREKEEEMAKKREEERQRKEREEVERKRREEQERKRR 558
Query: 799 AQRKTKAATEAQSSQE 846
+ K E + +E
Sbjct: 559 EEEARKREEERKREEE 574
>At5g52280.1 68418.m06488 protein transport protein-related low
similarity to SP|P25386 Intracellular protein transport
protein USO1 {Saccharomyces cerevisiae}
Length = 853
Score = 36.7 bits (81), Expect = 0.020
Identities = 38/137 (27%), Positives = 59/137 (43%), Gaps = 5/137 (3%)
Frame = +1
Query: 451 IEEKRQRLE-EAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLE- 624
++EK +RL E E K K N +Q K+ E + KEQ +
Sbjct: 583 LQEKCKRLSLEMESKLSEHENLTKKTLAEANNLRLQNKTLEEMQEKTHTEITQEKEQRKH 642
Query: 625 -EEKKISLSIRIKPLTIEGLSVDKLRQKAQELLGVHRQTRDREIRSRREAKETGLRLKRA 801
EEK +LS++++ L E L + KLR ++ + +E R R+ E L L +
Sbjct: 643 VEEKNKALSMKVQMLESEVLKLTKLRDES-SAAATETEKIIQEWRKERDEFERKLSLAKE 701
Query: 802 QRKT--KAATEAQSSQE 846
KT K T +SS +
Sbjct: 702 VAKTAQKELTLTKSSND 718
>At5g25870.1 68418.m03069 hypothetical protein
Length = 173
Score = 33.9 bits (74), Expect = 0.14
Identities = 16/38 (42%), Positives = 27/38 (71%), Gaps = 2/38 (5%)
Frame = +2
Query: 722 ECIVKLETEKYDLEERQKRQDYDLKE--LKERQKQQLR 829
E +VKLE + Y+LEE + R++ +KE LK + K++L+
Sbjct: 79 EILVKLEKKYYELEEVENRENLQMKEKTLKRKYKRELK 116
>At1g45545.1 68414.m05199 hypothetical protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827)
Length = 752
Score = 33.1 bits (72), Expect = 0.24
Identities = 18/40 (45%), Positives = 26/40 (65%)
Frame = +2
Query: 704 RPRNFWECIVKLETEKYDLEERQKRQDYDLKELKERQKQQ 823
R RN E + KLE EK + EE+Q +QD DL +L+ + +Q
Sbjct: 225 RTRNVVEEL-KLELEKAEKEEQQAKQDSDLAKLRVEEMEQ 263
>At3g51010.1 68416.m05585 expressed protein
Length = 188
Score = 32.7 bits (71), Expect = 0.32
Identities = 22/66 (33%), Positives = 34/66 (51%)
Frame = +1
Query: 451 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEE 630
I ++R + +KKRQA++Q K + +++K A ER +QLEEE
Sbjct: 125 IGQRRAFILSEKKKRQALVQEAKRKKRIKQ---VERKMAAVARDRAWAERLIELQQLEEE 181
Query: 631 KKISLS 648
KK S+S
Sbjct: 182 KKKSMS 187
>At2g03150.1 68415.m00268 ATP/GTP-binding protein family contains
ATP/GTP-binding site motif A (P-loop), PROSITE:PS00017
Length = 1340
Score = 31.5 bits (68), Expect = 0.74
Identities = 22/89 (24%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Frame = +1
Query: 451 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNA-QLERNKTKEQLEE 627
++ K++ KK++ + K +KTG + +KK+ + +S +++RN T E+ +
Sbjct: 898 VDVKQETGSPDTKKKEGASSSSKKDTKTGEDKKAEKKNNSETMSEGKKIDRNNTDEKEVK 957
Query: 628 EKKISLSIRIKPLTIEGLSVDKLRQKAQE 714
EK I+ + E K R+K +E
Sbjct: 958 EKVTEKEIKERGGKDESRIQVKDRKKCEE 986
>At5g58630.1 68418.m07347 expressed protein
Length = 372
Score = 30.7 bits (66), Expect = 1.3
Identities = 23/83 (27%), Positives = 39/83 (46%)
Frame = +1
Query: 541 NFTIQKKSENFGLSNAQLERNKTKEQLEEEKKISLSIRIKPLTIEGLSVDKLRQKAQELL 720
+F K + G N + R+ + Q + E + L K I ++V R++ + +
Sbjct: 130 SFEKDKNDKELGTRNCKKRRDTRENQSKTEDQTHLEG--KENNINAMNVSPGRERLE--I 185
Query: 721 GVHRQTRDREIRSRREAKETGLR 789
G Q R + +SRR+ KET LR
Sbjct: 186 GELMQRRKEKRKSRRKRKETKLR 208
>At3g58940.1 68416.m06568 F-box family protein contains F-box domain
Pfam:PF00646
Length = 618
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = +2
Query: 707 PRNFWECIVKLETEKYDLEERQKRQDYDLKELKERQKQQL 826
P+ + ++++ E DL+ERQ+ Q+ L +LKER + L
Sbjct: 485 PQEMSQDYLQMQLEVADLKERQRDQEAKLADLKERLRAML 524
>At2g25350.1 68415.m03032 phox (PX) domain-containing protein weak
similarity to SP|Q9UTK5 Abnormal long morphology protein
1 (Sp8) {Schizosaccharomyces pombe}; contains Pfam
profile PF00787: PX domain
Length = 643
Score = 30.7 bits (66), Expect = 1.3
Identities = 33/129 (25%), Positives = 55/129 (42%)
Frame = +1
Query: 448 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 627
D+EE RQ+ E E K ++ D SKT N TI + E E + TK+QLE+
Sbjct: 455 DMEELRQKTFEMELKLKSKEDGSSD-SKTSGNSTISESHE------LLQEMDATKQQLED 507
Query: 628 EKKISLSIRIKPLTIEGLSVDKLRQKAQELLGVHRQTRDREIRSRREAKETGLRLKRAQR 807
+ + + K + L ++ + L H + RS E +T L++ +
Sbjct: 508 LSRRYVELEAK----SKADIKVLVREVKSLRRSHMEMEKELTRSLTEKSDTEKLLQQERI 563
Query: 808 KTKAATEAQ 834
+ EA+
Sbjct: 564 IVENTLEAR 572
>At5g45520.1 68418.m05591 hypothetical protein
Length = 1167
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Frame = +1
Query: 448 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENF-----GLSNAQLERNKTK 612
++E+ ++ E E++ + +++ KT P+ +K +N G SN + + +K K
Sbjct: 624 NLEDGKKHDEGKEERSLKSDEVVEEEKKTSPSEEATEKFQNKPGDQKGKSNVEGDGDKGK 683
Query: 613 EQLEEEKK 636
LEEEKK
Sbjct: 684 ADLEEEKK 691
>At5g08080.1 68418.m00942 syntaxin, putative (SYP132) similar to
SP|Q9ZSD4 Syntaxin 121 (AtSYP121) (Syntaxin-related
protein At-Syr1) {Arabidopsis thaliana}
Length = 304
Score = 29.9 bits (64), Expect = 2.2
Identities = 26/99 (26%), Positives = 47/99 (47%)
Frame = +1
Query: 451 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEE 630
I+++ +L++ KK QA + K +K I+K E + R K +LEE
Sbjct: 44 IDKQYDKLDKLLKKLQASHEESKSVTKAPAMKAIKKTMEKDVDEVGSIARF-IKGKLEEL 102
Query: 631 KKISLSIRIKPLTIEGLSVDKLRQKAQELLGVHRQTRDR 747
+ +L+ R KP +G VD R + L + ++ +D+
Sbjct: 103 DRENLANRQKPGCAKGSGVD--RSRTATTLSLKKKLKDK 139
>At1g48280.1 68414.m05393 hydroxyproline-rich glycoprotein family
protein
Length = 558
Score = 29.9 bits (64), Expect = 2.2
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Frame = +1
Query: 454 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTK---EQLE 624
+EKR+R+EE E+K +KD N ++ + E SN +LE N K + +
Sbjct: 112 DEKRKRMEELEEKLVVNESLIKDLQLQVLN--LKTELEEARNSNVELELNNRKLSQDLVS 169
Query: 625 EEKKI-SLSIRIKP 663
E KI SLS KP
Sbjct: 170 AEAKISSLSSNDKP 183
>At3g25840.1 68416.m03219 protein kinase family protein contains
Pfam profile: PF00069 eukaryotic protein kinase domain
Length = 935
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/53 (28%), Positives = 30/53 (56%)
Frame = +2
Query: 692 NSDRRPRNFWECIVKLETEKYDLEERQKRQDYDLKELKERQKQQLRHKALKKG 850
+SDRR E ++E+++ +E+++ + D KER+ LR +A ++G
Sbjct: 283 DSDRRREREREKRREIESDRERRKEKERERSIDRDRRKEREGDYLRDRANERG 335
>At3g18480.1 68416.m02348 CCAAT displacement protein-related /
CDP-related similar to CCAAT displacement protein (CDP)
(Cut-like 1) (Swiss-Prot:P39880) [Homo sapiens];
contains Pfam:PF00904 Involucrin repeat
Length = 689
Score = 29.5 bits (63), Expect = 3.0
Identities = 27/132 (20%), Positives = 56/132 (42%)
Frame = +1
Query: 451 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEE 630
I E+ ++L E E + + M +++ + K++ + + + ++Q+EE+
Sbjct: 130 IAEQDRKLSEVESENRKMKVELEEFRTEATHL----KNQQATIRRLEERNRQLEQQMEEK 185
Query: 631 KKISLSIRIKPLTIEGLSVDKLRQKAQELLGVHRQTRDREIRSRREAKETGLRLKRAQRK 810
K + I+ + L E QK ELL Q ++R +++ T +L +
Sbjct: 186 IKEVVEIKQRNLAEEN-------QKTMELLKDREQALQDQLRQAKDSVSTMQKLHELAQN 238
Query: 811 TKAATEAQSSQE 846
AQS +E
Sbjct: 239 QLFELRAQSDEE 250
>At1g53250.1 68414.m06034 expressed protein
Length = 363
Score = 29.5 bits (63), Expect = 3.0
Identities = 27/120 (22%), Positives = 57/120 (47%), Gaps = 1/120 (0%)
Frame = +1
Query: 454 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSN-AQLERNKTKEQLEEE 630
E R+ + + + +AM + + S + +++ GL+N ++ NK ++ E+
Sbjct: 62 EIHRKEVNSSLLEVKAMNKDTEADSDSDRKIKEEERRRKIGLANKGKVPWNKGRKHSEDT 121
Query: 631 KKISLSIRIKPLTIEGLSVDKLRQKAQELLGVHRQTRDREIRSRREAKETGLRLKRAQRK 810
++ RIK TIE L+ K+R+K + H+Q E + + A + +R++ K
Sbjct: 122 RR-----RIKQRTIEALTNPKVRKKMSD----HQQPHSNETKEKIRASVKQVWAERSRSK 172
>At5g13800.2 68418.m01610 hydrolase, alpha/beta fold family protein
low similarity to hydrolase [Terrabacter sp. DBF63]
GI:14196240; contains Pfam profile PF00561: hydrolase,
alpha/beta fold family
Length = 484
Score = 29.1 bits (62), Expect = 3.9
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Frame = -3
Query: 742 LEFDDALPEVPGPSVGVCR---RRDPRWSAA*CGWTGRSSSPLPAAPWSCCAPAGHC 581
L F +AL +V +C R DP W W + +P AP+ +PAGHC
Sbjct: 341 LSFSEALSRCKENNVQICLMYGREDP-WVRPL--WGKKIKKEIPNAPYYEISPAGHC 394
>At5g13800.1 68418.m01609 hydrolase, alpha/beta fold family protein
low similarity to hydrolase [Terrabacter sp. DBF63]
GI:14196240; contains Pfam profile PF00561: hydrolase,
alpha/beta fold family
Length = 484
Score = 29.1 bits (62), Expect = 3.9
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Frame = -3
Query: 742 LEFDDALPEVPGPSVGVCR---RRDPRWSAA*CGWTGRSSSPLPAAPWSCCAPAGHC 581
L F +AL +V +C R DP W W + +P AP+ +PAGHC
Sbjct: 341 LSFSEALSRCKENNVQICLMYGREDP-WVRPL--WGKKIKKEIPNAPYYEISPAGHC 394
>At5g05210.1 68418.m00555 nucleolar matrix protein-related contains
Pfam domain, PF04935: Surfeit locus protein 6
Length = 386
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/59 (20%), Positives = 33/59 (55%)
Frame = +1
Query: 463 RQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKKI 639
+Q + + +K+++ + K+ + F ++K+ + G ++E+NK ++ + EKK+
Sbjct: 310 KQSIHKDKKRQEKNAEKWKERIEGQQKFKVEKQQKRSGNIADRIEQNKMRKIAKREKKL 368
>At5g03660.1 68418.m00325 expressed protein low similarity to outer
surface protein F [Borrelia burgdorferi] GI:466482;
contains Pfam profile PF04949: Family of unknown
function (DUF662)
Length = 173
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +1
Query: 514 MKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKKISLSIRIK 660
+KD +F+ Q K E+ LS L K KE+ E+KK+ + R++
Sbjct: 18 LKDQLSESMSFSSQMKKEDDELSMKALSAFKAKEEEIEKKKMEIRERVQ 66
>At3g23930.1 68416.m03006 expressed protein
Length = 224
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 208 GDPEFIKRQDQKRSDLDEQLKEYINEWRKQR 300
G IK +D++ + QLKE EWRK+R
Sbjct: 26 GRRHLIKERDEREKVMFLQLKEAEREWRKER 56
>At5g42880.1 68418.m05226 hypothetical protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827)
Length = 751
Score = 28.7 bits (61), Expect = 5.2
Identities = 11/31 (35%), Positives = 22/31 (70%)
Frame = +2
Query: 731 VKLETEKYDLEERQKRQDYDLKELKERQKQQ 823
+KLE EK + EE+Q +QD +L +++ + ++
Sbjct: 212 LKLELEKAEKEEQQAKQDSELAQMRVEEMEK 242
>At5g41540.1 68418.m05048 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1038
Score = 28.7 bits (61), Expect = 5.2
Identities = 19/50 (38%), Positives = 24/50 (48%)
Frame = +1
Query: 448 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLE 597
D EKRQ L EAE+ R + S G +F + K SE F +S E
Sbjct: 502 DEPEKRQFLVEAEEIRDVLANETGTGSVLGISFDMSKVSE-FSISGRAFE 550
>At3g43160.1 68416.m04554 expressed protein merozoite surface
protein 2 (MSP-2), EMBL:PFU72951, Plasmodium falciparum
Length = 295
Score = 28.7 bits (61), Expect = 5.2
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +2
Query: 185 VDRRSRVREIQNSSSVKTRSGRTWMNS*RNTSTNGANSGPRRRMSSNALKRSR 343
+D+ + +S+ +TRSGR +++ +ST NS R SS K R
Sbjct: 91 IDQELKSSTGSENSTTRTRSGRGFIDYVLESSTGTENSSTRTAESSTRTKNGR 143
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 28.7 bits (61), Expect = 5.2
Identities = 22/133 (16%), Positives = 57/133 (42%)
Frame = +1
Query: 448 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 627
+++++ +E K + L+ +K + S+N + +++KTKE+ ++
Sbjct: 970 ELKKQEDNKKETTKSENSKLKEENKDNKEKKE-SEDSASKNREKKEYEEKKSKTKEEAKK 1028
Query: 628 EKKISLSIRIKPLTIEGLSVDKLRQKAQELLGVHRQTRDREIRSRREAKETGLRLKRAQR 807
EKK S + + E K ++++++L ++ +E + K K+
Sbjct: 1029 EKKKSQDKKREEKDSEERKSKKEKEESRDLKAKKKEEETKEKKESENHKSKKKEDKKEHE 1088
Query: 808 KTKAATEAQSSQE 846
K+ + + +E
Sbjct: 1089 DNKSMKKEEDKKE 1101
>At1g67230.1 68414.m07652 expressed protein
Length = 1132
Score = 28.7 bits (61), Expect = 5.2
Identities = 29/124 (23%), Positives = 63/124 (50%)
Frame = +1
Query: 451 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEE 630
I++K + LEEA+KK A A+K K + + + K L+ + E + K+ +E +
Sbjct: 267 IKQKGKELEEAQKKIDAANLAVK---KLEDDVSSRIKD----LALREQETDVLKKSIETK 319
Query: 631 KKISLSIRIKPLTIEGLSVDKLRQKAQELLGVHRQTRDREIRSRREAKETGLRLKRAQRK 810
+ +++ K E ++V +L + Q L ++ + E+ +R++ + L+ K A+ +
Sbjct: 320 ARELQALQEKLEAREKMAVQQLVDEHQAKLDSTQREFELEMEQKRKSIDDSLKSKVAEVE 379
Query: 811 TKAA 822
+ A
Sbjct: 380 KREA 383
>At1g63300.1 68414.m07156 expressed protein similar to Intracellular
protein transport protein USO1 (Swiss-Prot:P25386)
[Saccharomyces cerevisiae]; similar to Myosin II heavy
chain, non muscle (Swiss-Prot:P08799) [Dictyostelium
discoideum]
Length = 1029
Score = 28.7 bits (61), Expect = 5.2
Identities = 30/124 (24%), Positives = 56/124 (45%)
Frame = +1
Query: 451 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEE 630
+ E ++L + + ML+ + + S N QK+ E +N E KE++E
Sbjct: 684 LHELSEKLSFKTSQMERMLENLDEKSNEIDN---QKRHEEDVTANLNQEIKILKEEIENL 740
Query: 631 KKISLSIRIKPLTIEGLSVDKLRQKAQELLGVHRQTRDREIRSRREAKETGLRLKRAQRK 810
KK S+ ++ E L VD +K ++ + + RE + E E+ + L R + +
Sbjct: 741 KKNQDSLMLQAEQAENLRVD--LEKTKKSVMEAEASLQRENMKKIEL-ESKISLMRKESE 797
Query: 811 TKAA 822
+ AA
Sbjct: 798 SLAA 801
>At1g01670.1 68414.m00085 U-box domain-containing protein
Length = 365
Score = 28.7 bits (61), Expect = 5.2
Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Frame = +1
Query: 454 EEKRQRLEEAEKKRQ-----AMLQAMKDASKTGPNFT-IQKKSENFGLSNAQLERNKTKE 615
EE+R+RLE E KR+ M + ++A + T I E + E N+ K
Sbjct: 177 EEQRRRLEIEELKREKEQRDKMRRVREEALSSSSGVTKILYNEEVMRRREVEAELNRAKA 236
Query: 616 QLEEEKKISLSIR 654
++E+ K++ + ++
Sbjct: 237 EIEDMKRVQIELK 249
>At3g28270.2 68416.m03531 expressed protein similar to At14a protein
(GI:11994571 and GI:11994573) [Arabidopsis thaliana]
Length = 374
Score = 28.3 bits (60), Expect = 6.9
Identities = 27/116 (23%), Positives = 44/116 (37%)
Frame = +1
Query: 499 AMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKKISLSIRIKPLTIEG 678
A+ + A G T+ KK + N QLE K E++EE + + +
Sbjct: 243 ALAAPLLAAGWAGVYTTLDKKKDAL---NKQLEGLKKVEEIEESVEKGIKTNEEATETVS 299
Query: 679 LSVDKLRQKAQELLGVHRQTRDREIRSRREAKETGLRLKRAQRKTKAATEAQSSQE 846
+ VD L + + +L + D E K+ ++ TK TE S E
Sbjct: 300 ILVDGLEDRIKNMLKLVDNAIDHEDNEAATRIVLTQISKKVEKLTKKITEVGESVE 355
>At3g28270.1 68416.m03530 expressed protein similar to At14a protein
(GI:11994571 and GI:11994573) [Arabidopsis thaliana]
Length = 374
Score = 28.3 bits (60), Expect = 6.9
Identities = 27/116 (23%), Positives = 44/116 (37%)
Frame = +1
Query: 499 AMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKKISLSIRIKPLTIEG 678
A+ + A G T+ KK + N QLE K E++EE + + +
Sbjct: 243 ALAAPLLAAGWAGVYTTLDKKKDAL---NKQLEGLKKVEEIEESVEKGIKTNEEATETVS 299
Query: 679 LSVDKLRQKAQELLGVHRQTRDREIRSRREAKETGLRLKRAQRKTKAATEAQSSQE 846
+ VD L + + +L + D E K+ ++ TK TE S E
Sbjct: 300 ILVDGLEDRIKNMLKLVDNAIDHEDNEAATRIVLTQISKKVEKLTKKITEVGESVE 355
>At3g07780.1 68416.m00949 expressed protein
Length = 566
Score = 28.3 bits (60), Expect = 6.9
Identities = 22/92 (23%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Frame = +1
Query: 577 LSNAQLERNKTKEQLEEEKKISLSIRIKPLTIE--GLSVDKLRQKAQELLGVHRQTRDRE 750
++ Q+ER K K+Q+EE ++I +R+K E L ++ + +A+ L + + +++
Sbjct: 434 VAELQMERQKKKQQIEEVERI---VRLKQAEAEMFQLKANEAKVEAERLERIVKAKKEK- 489
Query: 751 IRSRREAKETGLRLKRAQRKTKAATEAQSSQE 846
+ LRL A+ + + E QE
Sbjct: 490 TEEEYASNYLKLRLSEAEAEKEYLFEKIKEQE 521
>At1g73860.1 68414.m08552 kinesin motor protein-related similar to
kinesin-C GB:AAF04841 from [Strongylocentrotus
purpuratus]
Length = 1030
Score = 28.3 bits (60), Expect = 6.9
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +2
Query: 734 KLETEKYDLEERQKRQDYDL-KELKERQKQQLRHKALKK 847
++ETEK EE++K ++ D+ K +K+ + L ALK+
Sbjct: 212 QIETEKSMWEEKKKHEEEDMVKLMKQNDQHNLEISALKQ 250
>At1g29940.1 68414.m03658 DNA-directed RNA polymerase family protein
similar to SP|P22138 DNA-directed RNA polymerase I 135
kDa polypeptide (EC 2.7.7.6) (RNA polymerase I subunit
2) {Saccharomyces cerevisiae}; contains Pfam profiles
PF04563; RNA polymerase beta subunit, PF04560: RNA
polymerase Rpb2 domain 7, PF04561: RNA polymerase Rpb2
domain 2, PF04565: RNA polymerase Rpb2 domain 3,
PF00562: RNA polymerase Rpb2 domain 6
Length = 1114
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = +2
Query: 689 TNSDRRPRNFWECIVKLETEKYDLEERQKRQDYDLKELKERQKQQLRHK 835
++ ++ PRN ++C + +T Y + Q R D + L+ Q +R K
Sbjct: 631 SDHNQSPRNMYQCQMAKQTMAYSTQALQFRADQKIYHLQTPQSPVVRTK 679
>At5g08600.1 68418.m01023 U3 ribonucleoprotein (Utp) family protein
contains Pfam profile: PF04615 Utp14 protein
Length = 822
Score = 27.9 bits (59), Expect = 9.1
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Frame = +1
Query: 475 EEAEKKRQAMLQAMKDASKTGPNFT--IQKKSENFGLSNAQLERNKTKEQLEEEKKISLS 648
EEA+K R+ L+ KDAS + + KK+E + +KE E+ ++ +
Sbjct: 710 EEAKKTREQALRKRKDASFKHVIISEKVDKKAEKLQTKSLPYPYT-SKEVFEQSMRMPIG 768
Query: 649 IRIKPLTIEGL 681
P TI G+
Sbjct: 769 PEFNPTTIVGV 779
>At2g48120.1 68415.m06024 pale cress protein (PAC) identical to PAC
[Arabidopsis thaliana] gi|1483213|emb|CAA65334
Length = 313
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 697 RQKAQELLGVHRQTRDREIRSRREAKETGLRLK 795
R+K +EL + R+ + E R E +E G RLK
Sbjct: 68 REKTKELRRMQREEEEEEERKIEEYREIGTRLK 100
>At2g29210.1 68415.m03550 splicing factor PWI domain-containing
protein contains Pfam profile PF01480: PWI domain
Length = 878
Score = 27.9 bits (59), Expect = 9.1
Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Frame = +2
Query: 194 RSRVREIQNSSSVKTRSG-RTWMNS*RNTSTN---GANSGPRRRMSSNALKRSR 343
RS +R ++ S KT SG +++ ++ ST+ A+ PR+R SN+ +RSR
Sbjct: 209 RSPLRGSRSRSISKTNSGSKSYSGERKSRSTSQSSDASISPRKRRLSNSRRRSR 262
>At1g05320.1 68414.m00539 myosin-related similar to non-muscle
myosin II heavy chain (GI:19879404) [Loligo pealei];
ESTs gb|AA042402,gb|ATTS1380 come from this gene
Length = 828
Score = 27.9 bits (59), Expect = 9.1
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Frame = +1
Query: 451 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKT---KEQL 621
+E+K + LEE +K + A+ A + G +IQ + +S + N++ +L
Sbjct: 155 LEQKLKSLEELSEKVSELKSALIVAEEEGKKSSIQMQEYQEKVSKLESSLNQSSARNSEL 214
Query: 622 EEEKKISL 645
EE+ +I+L
Sbjct: 215 EEDLRIAL 222
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.313 0.128 0.346
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,706,247
Number of Sequences: 28952
Number of extensions: 203750
Number of successful extensions: 875
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 866
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1980143200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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