Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30080X
(533 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 169 1e-42
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 169 1e-42
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 169 1e-42
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 169 1e-42
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 168 2e-42
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 168 2e-42
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 163 5e-41
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 163 5e-41
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 153 9e-38
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 143 8e-35
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 129 1e-30
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 124 4e-29
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 99 2e-21
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 75 3e-14
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 68 3e-12
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 63 1e-10
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 51 6e-07
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 47 7e-06
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 40 0.001
At5g43500.2 68418.m05318 expressed protein 35 0.039
At5g43500.1 68418.m05319 expressed protein 35 0.039
At3g24210.1 68416.m03038 ankyrin repeat family protein contains ... 27 5.9
At3g20270.2 68416.m02568 lipid-binding serum glycoprotein family... 27 7.9
At3g20270.1 68416.m02567 lipid-binding serum glycoprotein family... 27 7.9
At3g14720.1 68416.m01861 mitogen-activated protein kinase, putat... 27 7.9
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 169 bits (410), Expect = 1e-42
Identities = 76/91 (83%), Positives = 84/91 (92%)
Frame = -3
Query: 531 CNVAIRKDLYAYSVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGS 352
C+V IRKDLY V+SGG+TM+PGIADRM KEITALAPS++KIK++APPERKYSVWIGGS
Sbjct: 287 CDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGS 346
Query: 351 ILASLSTFQQMWISKEEYDESGPGIVHRKCF 259
ILASLSTFQQMWISK EYDESGP IVHRKCF
Sbjct: 347 ILASLSTFQQMWISKSEYDESGPSIVHRKCF 377
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 169 bits (410), Expect = 1e-42
Identities = 76/91 (83%), Positives = 84/91 (92%)
Frame = -3
Query: 531 CNVAIRKDLYAYSVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGS 352
C+V IRKDLY V+SGGTTM+PGIADRM KEITALAPS++KIK++APPERKYSVWIGGS
Sbjct: 287 CDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGS 346
Query: 351 ILASLSTFQQMWISKEEYDESGPGIVHRKCF 259
ILASLSTFQQMWI+K EYDESGP IVHRKCF
Sbjct: 347 ILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 169 bits (410), Expect = 1e-42
Identities = 76/91 (83%), Positives = 84/91 (92%)
Frame = -3
Query: 531 CNVAIRKDLYAYSVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGS 352
C+V IRKDLY V+SGGTTM+PGIADRM KEITALAPS++KIK++APPERKYSVWIGGS
Sbjct: 287 CDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGS 346
Query: 351 ILASLSTFQQMWISKEEYDESGPGIVHRKCF 259
ILASLSTFQQMWI+K EYDESGP IVHRKCF
Sbjct: 347 ILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 169 bits (410), Expect = 1e-42
Identities = 76/91 (83%), Positives = 84/91 (92%)
Frame = -3
Query: 531 CNVAIRKDLYAYSVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGS 352
C+V IRKDLY V+SGGTTM+PGIADRM KEITALAPS++KIK++APPERKYSVWIGGS
Sbjct: 287 CDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGS 346
Query: 351 ILASLSTFQQMWISKEEYDESGPGIVHRKCF 259
ILASLSTFQQMWI+K EYDESGP IVHRKCF
Sbjct: 347 ILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 168 bits (408), Expect = 2e-42
Identities = 76/91 (83%), Positives = 84/91 (92%)
Frame = -3
Query: 531 CNVAIRKDLYAYSVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGS 352
C+V IRKDLY V+SGGTTM+ GIADRM KEITALAPS++KIK++APPERKYSVWIGGS
Sbjct: 287 CDVDIRKDLYGNIVLSGGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGS 346
Query: 351 ILASLSTFQQMWISKEEYDESGPGIVHRKCF 259
ILASLSTFQQMWISK EYDE+GPGIVHRKCF
Sbjct: 347 ILASLSTFQQMWISKAEYDEAGPGIVHRKCF 377
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 168 bits (408), Expect = 2e-42
Identities = 76/91 (83%), Positives = 84/91 (92%)
Frame = -3
Query: 531 CNVAIRKDLYAYSVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGS 352
C+V IRKDLY V+SGGTTM+ GIADRM KEITALAPS++KIK++APPERKYSVWIGGS
Sbjct: 287 CDVDIRKDLYGNIVLSGGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGS 346
Query: 351 ILASLSTFQQMWISKEEYDESGPGIVHRKCF 259
ILASLSTFQQMWISK EYDE+GPGIVHRKCF
Sbjct: 347 ILASLSTFQQMWISKAEYDEAGPGIVHRKCF 377
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 163 bits (397), Expect = 5e-41
Identities = 74/91 (81%), Positives = 82/91 (90%)
Frame = -3
Query: 531 CNVAIRKDLYAYSVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGS 352
C+V IRKDLY V+SGGTTM+ GI DRM KEITALAPS++KIK++APPERKYSVWIGGS
Sbjct: 287 CDVDIRKDLYGNIVLSGGTTMFGGIGDRMSKEITALAPSSMKIKVVAPPERKYSVWIGGS 346
Query: 351 ILASLSTFQQMWISKEEYDESGPGIVHRKCF 259
ILASLSTFQQMWI+K EYDESGP IVHRKCF
Sbjct: 347 ILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 163 bits (397), Expect = 5e-41
Identities = 74/91 (81%), Positives = 82/91 (90%)
Frame = -3
Query: 531 CNVAIRKDLYAYSVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGS 352
C+V IRKDLY V+SGGTTM+ GI DRM KEITALAPS++KIK++APPERKYSVWIGGS
Sbjct: 287 CDVDIRKDLYGNIVLSGGTTMFGGIGDRMSKEITALAPSSMKIKVVAPPERKYSVWIGGS 346
Query: 351 ILASLSTFQQMWISKEEYDESGPGIVHRKCF 259
ILASLSTFQQMWI+K EYDESGP IVHRKCF
Sbjct: 347 ILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 153 bits (370), Expect = 9e-38
Identities = 68/91 (74%), Positives = 78/91 (85%)
Frame = -3
Query: 531 CNVAIRKDLYAYSVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGS 352
C+V IRKDLY V+SGGTTM+PGIADRM KEI ALAP ++KIK++APPERKYSVW+GGS
Sbjct: 288 CDVDIRKDLYGNIVLSGGTTMFPGIADRMNKEINALAPPSMKIKVVAPPERKYSVWVGGS 347
Query: 351 ILASLSTFQQMWISKEEYDESGPGIVHRKCF 259
ILASLS+F MWI+K EYDE G IVHRKCF
Sbjct: 348 ILASLSSFAPMWITKAEYDEQGGAIVHRKCF 378
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 143 bits (346), Expect = 8e-35
Identities = 64/91 (70%), Positives = 77/91 (84%)
Frame = -3
Query: 531 CNVAIRKDLYAYSVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGS 352
C+ IRKDLY V+SGGTTM+ GI +RM KEI ALA + ++IKI+APPERKYSVWIGGS
Sbjct: 239 CDDDIRKDLYGNIVLSGGTTMFRGIEERMTKEINALAAANMRIKIVAPPERKYSVWIGGS 298
Query: 351 ILASLSTFQQMWISKEEYDESGPGIVHRKCF 259
ILASLST++QMWI+K EY+E+GP IVH KCF
Sbjct: 299 ILASLSTYEQMWITKAEYEENGPAIVHTKCF 329
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 129 bits (311), Expect = 1e-30
Identities = 56/90 (62%), Positives = 71/90 (78%)
Frame = -3
Query: 531 CNVAIRKDLYAYSVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGS 352
C V R+D+Y +M+GGTTM GI +RM KE+ AL PS++K+K++ PPE + SVWIGGS
Sbjct: 276 CPVDTRRDMYGNILMTGGTTMLHGIKERMTKELNALVPSSMKVKVVVPPESECSVWIGGS 335
Query: 351 ILASLSTFQQMWISKEEYDESGPGIVHRKC 262
ILASLSTF QMWI+K+EY+E G IVHRKC
Sbjct: 336 ILASLSTFHQMWITKDEYEEHGAAIVHRKC 365
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 124 bits (299), Expect = 4e-29
Identities = 58/75 (77%), Positives = 67/75 (89%)
Frame = -3
Query: 531 CNVAIRKDLYAYSVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGS 352
C+V IRKDLY V+SGGTTM+ GIADRM KEITALAPS++KIK++APPERKYSVWIGGS
Sbjct: 287 CDVDIRKDLYGNIVLSGGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGS 346
Query: 351 ILASLSTFQQMWISK 307
ILASLSTFQQ+ I +
Sbjct: 347 ILASLSTFQQVKIDQ 361
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 98.7 bits (235), Expect = 2e-21
Identities = 42/93 (45%), Positives = 67/93 (72%), Gaps = 3/93 (3%)
Frame = -3
Query: 531 CNVAIRKDLYAYSVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAP---PERKYSVWI 361
C+V IR++LY+ +++GGT+ + +R++K++ +P + ++K++A ER++SVWI
Sbjct: 348 CDVDIRRELYSSILLAGGTSSMQQLKERLEKDLIEESPHSARVKVLASGNTTERRFSVWI 407
Query: 360 GGSILASLSTFQQMWISKEEYDESGPGIVHRKC 262
GGSILASL +FQQMW SK EY+E G + RKC
Sbjct: 408 GGSILASLGSFQQMWFSKSEYEEHGASYIQRKC 440
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 74.9 bits (176), Expect = 3e-14
Identities = 38/91 (41%), Positives = 52/91 (57%), Gaps = 6/91 (6%)
Frame = -3
Query: 513 KDLYAYSVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERK------YSVWIGGS 352
+ L +V+ GGTT G R QKE L S I+ ++ PPE YS W+GG+
Sbjct: 274 RQLLENTVLCGGTTSMTGFESRFQKEAN-LCSSAIRPTLVKPPEYMPENLGMYSAWVGGA 332
Query: 351 ILASLSTFQQMWISKEEYDESGPGIVHRKCF 259
ILA + Q ++K +YDE+GP +VHRKCF
Sbjct: 333 ILAKVVFPQNQHVTKADYDETGPSVVHRKCF 363
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 68.1 bits (159), Expect = 3e-12
Identities = 30/91 (32%), Positives = 52/91 (57%)
Frame = -3
Query: 531 CNVAIRKDLYAYSVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGS 352
C+ ++ LY +++GG+T++P + +R++ E+ L P +KI + VW GGS
Sbjct: 330 CHSYLQPVLYQSIILTGGSTLFPQLKERLEGELRPLVPDHFDVKITTQEDPILGVWRGGS 389
Query: 351 ILASLSTFQQMWISKEEYDESGPGIVHRKCF 259
+LAS F+ M ++K EY+E G R+ F
Sbjct: 390 LLASSPDFESMCVTKAEYEELGSARCRRRFF 420
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 63.3 bits (147), Expect = 1e-10
Identities = 34/89 (38%), Positives = 55/89 (61%), Gaps = 12/89 (13%)
Frame = -3
Query: 516 RKDLYAYSVMSGGTTMYPGIADRMQKEI------TALAPS-----TIKIKIIAPPERKYS 370
R LY + V+SGG+TMYPG+ R++KEI T L + ++++I PP RK+
Sbjct: 291 RMMLYQHIVLSGGSTMYPGLPSRLEKEIQDRYLDTVLKGNKDGLKKLRLRIEDPPRRKHM 350
Query: 369 VWIGGSILAS-LSTFQQMWISKEEYDESG 286
V++GG++LA + + WI++E+Y E G
Sbjct: 351 VYLGGAVLAGIMKDAPEFWINREDYMEEG 379
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 50.8 bits (116), Expect = 6e-07
Identities = 27/96 (28%), Positives = 51/96 (53%), Gaps = 16/96 (16%)
Frame = -3
Query: 516 RKDLYAYSVMSGGTTMYPGIADRMQKEITALAPSTI----------------KIKIIAPP 385
R+ LY V+SGG+TM+ R+Q+++ + + + ++ +++ P
Sbjct: 321 RRALYKNIVLSGGSTMFKDFGRRLQRDLKKIVDARVLANNARTGGEITSQPVEVNVVSHP 380
Query: 384 ERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGI 277
++++VW GGS+L+S F +KEEY+E G I
Sbjct: 381 VQRFAVWFGGSVLSSTPEFFASCRTKEEYEEYGASI 416
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 47.2 bits (107), Expect = 7e-06
Identities = 21/68 (30%), Positives = 44/68 (64%), Gaps = 3/68 (4%)
Frame = -3
Query: 492 VMSGGTTMYPGIADRMQKEITALAPSTIK--IKIIAPPERKYSVWIGGSILASLSTFQQM 319
V++GG+ PG+++R+++E+ PS+I I++I PP + W G ++++LS F
Sbjct: 396 VLTGGSACLPGLSERLERELQDHLPSSISNGIRVIPPPYGVDTSWHGAKLISNLSIFPGP 455
Query: 318 W-ISKEEY 298
W I+++++
Sbjct: 456 WCITRKQF 463
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 39.9 bits (89), Expect = 0.001
Identities = 19/69 (27%), Positives = 34/69 (49%)
Frame = -3
Query: 492 VMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 313
+M+GG ++ PG+ +R++ I + P I ++ + W G S A+ F
Sbjct: 642 LMTGGCSLLPGMNERLECGIRMIRPCGSPINVVRAMDPVLDAWRGASAFAANLNFLGNAF 701
Query: 312 SKEEYDESG 286
+K +YDE G
Sbjct: 702 TKMDYDEKG 710
>At5g43500.2 68418.m05318 expressed protein
Length = 584
Score = 34.7 bits (76), Expect = 0.039
Identities = 18/84 (21%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Frame = -3
Query: 525 VAIRKDLYAYSVMSGGTTMYPGIADRMQKEITALAPSTIKIKII----APPERKYSVWIG 358
+ +R+ L++ + GG + G+ +++ + P T I + + E ++ W G
Sbjct: 476 IDLRRKLFSSIQLIGGAGLTKGLVAAVEERVLHAIPPTEAIDTVQVLPSRTEPQFVTWKG 535
Query: 357 GSILASLSTFQQMWISKEEYDESG 286
G+IL L ++ WI + ++ +G
Sbjct: 536 GAILGILDFGREAWIERHQWMVNG 559
>At5g43500.1 68418.m05319 expressed protein
Length = 596
Score = 34.7 bits (76), Expect = 0.039
Identities = 18/84 (21%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Frame = -3
Query: 525 VAIRKDLYAYSVMSGGTTMYPGIADRMQKEITALAPSTIKIKII----APPERKYSVWIG 358
+ +R+ L++ + GG + G+ +++ + P T I + + E ++ W G
Sbjct: 488 IDLRRKLFSSIQLIGGAGLTKGLVAAVEERVLHAIPPTEAIDTVQVLPSRTEPQFVTWKG 547
Query: 357 GSILASLSTFQQMWISKEEYDESG 286
G+IL L ++ WI + ++ +G
Sbjct: 548 GAILGILDFGREAWIERHQWMVNG 571
>At3g24210.1 68416.m03038 ankyrin repeat family protein contains
ankyrin repeats, Pfam domain PF00023
Length = 607
Score = 27.5 bits (58), Expect = 5.9
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -2
Query: 448 DAEGDHRPRALDHQDQDHRSPREEVLRMDRWIHPGFPV 335
D E +P+AL H S ++ LR W+ P FP+
Sbjct: 423 DNEHYRKPKALVSDKTRHESEYKKGLRPVLWLSPNFPL 460
>At3g20270.2 68416.m02568 lipid-binding serum glycoprotein family
protein similar to SP|P17213 Bactericidal
permeability-increasing protein precursor (BPI) {Homo
sapiens}; contains Pfam profile PF02886: LBP / BPI /
CETP family, C-terminal domain
Length = 515
Score = 27.1 bits (57), Expect = 7.9
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = -3
Query: 492 VMSGGTTMYPGIADRMQKEITALAPSTIKIKII 394
+ G + +Y G+ D QK I + T+ KI+
Sbjct: 209 INGGASWLYQGVVDAFQKMIISTVEKTVSTKIV 241
>At3g20270.1 68416.m02567 lipid-binding serum glycoprotein family
protein similar to SP|P17213 Bactericidal
permeability-increasing protein precursor (BPI) {Homo
sapiens}; contains Pfam profile PF02886: LBP / BPI /
CETP family, C-terminal domain
Length = 722
Score = 27.1 bits (57), Expect = 7.9
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = -3
Query: 492 VMSGGTTMYPGIADRMQKEITALAPSTIKIKII 394
+ G + +Y G+ D QK I + T+ KI+
Sbjct: 416 INGGASWLYQGVVDAFQKMIISTVEKTVSTKIV 448
>At3g14720.1 68416.m01861 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK19) identical to mitogen-activated
protein kinase (MAPK)(AtMPK19), PMID:12119167;
Length = 586
Score = 27.1 bits (57), Expect = 7.9
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = -3
Query: 498 YSVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYS 370
Y G + +YP ++K+ L ++ K + PP+RK++
Sbjct: 355 YMNSEGSSFLYPSAIGHLRKQFAYLEENSGKSGPVIPPDRKHA 397
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,909,911
Number of Sequences: 28952
Number of extensions: 189085
Number of successful extensions: 530
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 515
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 525
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 984125600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -