Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30074X
         (372 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g31490.1 68414.m03855 transferase family protein contains sim...    28   2.3  
At1g03830.1 68414.m00364 guanylate-binding family protein contai...    26   7.0  
At4g22820.2 68417.m03293 zinc finger (AN1-like) family protein c...    26   9.2  
At4g22820.1 68417.m03292 zinc finger (AN1-like) family protein c...    26   9.2  

>At1g31490.1 68414.m03855 transferase family protein contains
           similarity to anthranilate N-hydroxycinnamoyl
           benzoyltransferase GI:3288180, GI:2239091 from (Dianthus
           caryophyllus); contains Pfam profile PF02458 transferase
           family
          Length = 444

 Score = 27.9 bits (59), Expect = 2.3
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = -3

Query: 127 RRMHVRARAPPRHAPHL 77
           RR  +RAR+PPR+ PHL
Sbjct: 186 RRNLLRARSPPRYDPHL 202


>At1g03830.1 68414.m00364 guanylate-binding family protein contains
            Pfam domains PF02263: Guanylate-binding protein,
            N-terminal domain and PF02841: Guanylate-binding protein,
            C-terminal domain
          Length = 991

 Score = 26.2 bits (55), Expect = 7.0
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = -1

Query: 147  IESASECVGCTCAREHRRDTPPTSAPHTRTCTPRTLHLTSNKA 19
            +E+A  C G   A+E   D+    +   RT TPR    TS++A
Sbjct: 897  VEAAVTCSGSDFAQETEEDSVSQESRKVRTMTPR--RCTSSEA 937


>At4g22820.2 68417.m03293 zinc finger (AN1-like) family protein
           contains Pfam domains, PF01428: AN1-like Zinc finger and
           PF01754: A20-like zinc finger
          Length = 176

 Score = 25.8 bits (54), Expect = 9.2
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -1

Query: 162 YRGVCIESASECVGCTCAREHRRDTPPTS 76
           YRG+C E A   V      +  + +PP S
Sbjct: 42  YRGICAEEAQTAVAKAAVEKSFKPSPPRS 70


>At4g22820.1 68417.m03292 zinc finger (AN1-like) family protein
           contains Pfam domains, PF01428: AN1-like Zinc finger and
           PF01754: A20-like zinc finger
          Length = 176

 Score = 25.8 bits (54), Expect = 9.2
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -1

Query: 162 YRGVCIESASECVGCTCAREHRRDTPPTS 76
           YRG+C E A   V      +  + +PP S
Sbjct: 42  YRGICAEEAQTAVAKAAVEKSFKPSPPRS 70


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,039,321
Number of Sequences: 28952
Number of extensions: 127898
Number of successful extensions: 274
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 273
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 274
length of database: 12,070,560
effective HSP length: 73
effective length of database: 9,957,064
effective search space used: 497853200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)