Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30061
         (739 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g05470.1 68416.m00599 formin homology 2 domain-containing pro...    31   0.80 
At3g51250.1 68416.m05610 senescence/dehydration-associated prote...    31   1.1  
At2g42010.1 68415.m05197 phospholipase D beta 1 / PLD beta 1 (PL...    30   1.4  
At4g25020.1 68417.m03589 KOW domain-containing protein / D111/G-...    30   1.8  
At1g62440.1 68414.m07044 leucine-rich repeat family protein / ex...    30   1.8  
At1g52030.2 68414.m05870 myrosinase-binding protein, putative (F...    30   1.8  
At1g52030.1 68414.m05869 myrosinase-binding protein, putative (F...    30   1.8  
At5g13140.1 68418.m01505 expressed protein                             29   2.4  
At3g06130.1 68416.m00704 heavy-metal-associated domain-containin...    29   2.4  
At3g25500.1 68416.m03171 formin homology 2 domain-containing pro...    29   3.2  
At3g01880.1 68416.m00133 hypothetical protein                          29   4.3  
At4g34150.1 68417.m04846 C2 domain-containing protein similar to...    28   7.4  
At3g45230.1 68416.m04881 hydroxyproline-rich glycoprotein family...    28   7.4  
At4g00890.1 68417.m00120 proline-rich family protein contains pr...    27   9.8  

>At3g05470.1 68416.m00599 formin homology 2 domain-containing
           protein / FH2 domain-containing protein contains formin
           homology 2 domain, Pfam:PF02181
          Length = 884

 Score = 31.1 bits (67), Expect = 0.80
 Identities = 20/62 (32%), Positives = 29/62 (46%)
 Frame = +3

Query: 420 LRTLLPSTDLCHTQSELAYLTPWTAPTPYPSPDLTQ*PLRSTSPYQSTGPYRYPYLMQYP 599
           L  + PST      +E A  +PW AP+P P P+    P+ S + Y    P   P  ++ P
Sbjct: 75  LDLIKPSTSRRRNLAESASFSPWPAPSPSPFPN--GGPIESPA-YPPAPPRPIPPHLRRP 131

Query: 600 YP 605
            P
Sbjct: 132 LP 133


>At3g51250.1 68416.m05610 senescence/dehydration-associated
           protein-related similar to senescence-associated protein
           12 [Hemerocallis hybrid cultivar]
           gi|3551958|gb|AAC34857; similar to early-responsive to
           dehydration stress ERD7 protein [Arabidopsis thaliana]
           gi|15320412|dbj|BAB63916
          Length = 463

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
 Frame = +3

Query: 495 PTPYPSPD--LTQ*PLRSTSPYQSTGPYRYPYLMQY 596
           P  YP  D  +   P  ST+PY ++ PY YP L  +
Sbjct: 13  PAMYPQVDQSIPDNPFASTNPYVASSPYLYPSLSSH 48


>At2g42010.1 68415.m05197 phospholipase D beta 1 / PLD beta 1
           (PLDBETA1) identical to SP|P93733 Phospholipase D beta 1
           (EC 3.1.4.4) (AtPLDbeta1) (PLD beta 1) (PLDbeta)
           {Arabidopsis thaliana}; contains Pfam profiles: PF00614
           phospholipase D.active site motif, PF00168 C2 domain
          Length = 1083

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 16/47 (34%), Positives = 19/47 (40%)
 Frame = +3

Query: 495 PTPYPSPDLTQ*PLRSTSPYQSTGPYRYPYLMQYPYPWSNKLEYQSP 635
           P PYP P   + P     P   T  Y  PY    P P++    Y SP
Sbjct: 16  PYPYPYPAPYRPPSSEPYPPPPTNQYSAPYYPYPPPPYATPPPYASP 62


>At4g25020.1 68417.m03589 KOW domain-containing protein /
           D111/G-patch domain-containing protein contains Pfam
           profiles PF01585: G-patch domain, PF00467: KOW motif
          Length = 375

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -1

Query: 565 PVDWYGDVLLNGYWVRSGDGYGVGAVHGVR 476
           PVD +G+ LL GY  + G G G+ A   V+
Sbjct: 138 PVDGFGEALLAGYGWKPGQGIGLKAKEDVK 167


>At1g62440.1 68414.m07044 leucine-rich repeat family protein /
           extensin family protein similar to extensin-like protein
           [Lycopersicon esculentum] gi|5917664|gb|AAD55979;
           contains leucine-rich repeats, Pfam:PF00560; contains
           proline rich extensin domains, INTERPRO:IPR002965
          Length = 826

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 20/54 (37%), Positives = 25/54 (46%)
 Frame = +3

Query: 474 YLTPWTAPTPYPSPDLTQ*PLRSTSPYQSTGPYRYPYLMQYPYPWSNKLEYQSP 635
           Y  P T   P PSP +   P+  + P  S  P  YP + Q P P S  +EY  P
Sbjct: 710 YYLPVTQSPPPPSP-VYYPPVAKSPPPPS--PVYYPPVTQSPPPPSTPVEYHPP 760


>At1g52030.2 68414.m05870 myrosinase-binding protein, putative
           (F-ATMBP) identical to SP|Q9SAV1 Myrosinase binding
           protein-like f-AtMBP [Arabidopsis thaliana]; similar to
           myrosinase binding protein GI:1711295 from [Brassica
           napus]; contains Pfam PF01419: Jacalin-like lectin
           domain; identical to cDNA myrosinase-binding
           protein-like protein (MBP1.2)  GI:6760446
          Length = 642

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
 Frame = +3

Query: 471 AYLTPWTAPTPYPSPDLTQ*PLRSTSPYQSTGPYRYPYLMQYPYPW-SNKLE 623
           A+  P  APTP P+P     P  + SP  ++ P   P     P P   NK+E
Sbjct: 287 AHFAPLPAPTPAPAPAPAPAPAPAPSPAPASAPVPAPAPTPAPAPAPPNKVE 338


>At1g52030.1 68414.m05869 myrosinase-binding protein, putative
           (F-ATMBP) identical to SP|Q9SAV1 Myrosinase binding
           protein-like f-AtMBP [Arabidopsis thaliana]; similar to
           myrosinase binding protein GI:1711295 from [Brassica
           napus]; contains Pfam PF01419: Jacalin-like lectin
           domain; identical to cDNA myrosinase-binding
           protein-like protein (MBP1.2)  GI:6760446
          Length = 642

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
 Frame = +3

Query: 471 AYLTPWTAPTPYPSPDLTQ*PLRSTSPYQSTGPYRYPYLMQYPYPW-SNKLE 623
           A+  P  APTP P+P     P  + SP  ++ P   P     P P   NK+E
Sbjct: 287 AHFAPLPAPTPAPAPAPAPAPAPAPSPAPASAPVPAPAPTPAPAPAPPNKVE 338


>At5g13140.1 68418.m01505 expressed protein
          Length = 267

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
 Frame = +3

Query: 474 YLTPWTAPTPYPS-PDLTQ*PLRSTSPYQSTGPYRYPYLMQYPYPWSNKLEY 626
           YL P+  P PYP  P L   P   + P+ S  P+  P L    + W N + +
Sbjct: 203 YLAPYWFPWPYPDLPPLPTLPPFPSFPFPSL-PFGNPNLALPAFDWKNPVTW 253


>At3g06130.1 68416.m00704 heavy-metal-associated domain-containing
           protein contains Pfam heavy metal associated domain
           PF00403
          Length = 473

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +3

Query: 546 SPYQSTGPYRYPYLMQYPYP 605
           +P+Q   P+ YPY   YPYP
Sbjct: 431 NPHQYPNPHPYPYPYPYPYP 450



 Score = 27.5 bits (58), Expect = 9.8
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +3

Query: 552 YQSTGPYRYPYLMQYPYPWSN 614
           Y +  PY YPY   YP P+ N
Sbjct: 435 YPNPHPYPYPYPYPYPPPYGN 455


>At3g25500.1 68416.m03171 formin homology 2 domain-containing
           protein / FH2 domain-containing protein contains formin
           homology 2 domain, Pfam:PF02181
          Length = 1051

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +3

Query: 495 PTPYPSPDLTQ*PLRSTSPYQSTGPYRYPYLMQYP 599
           P+P   P L + P  ST+P  S+ P   P+   YP
Sbjct: 38  PSPPSPPPLPKLPFSSTTPPSSSDPNASPFFPLYP 72


>At3g01880.1 68416.m00133 hypothetical protein
          Length = 592

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = +3

Query: 531 PLRSTSPYQSTG-PYRYPYLMQYPYPWSNKLEYQSPL 638
           PL + S   S G P++YPYL     P     ++ SPL
Sbjct: 32  PLTNISYVNSLGYPFKYPYLSSNGLPVETSFKFPSPL 68


>At4g34150.1 68417.m04846 C2 domain-containing protein similar to
           calcium-dependent protein kinase [Dunaliella
           tertiolecta] GI:6644464; contains Pfam profile PF00168:
           C2 domain
          Length = 247

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = +3

Query: 483 PWTAPTPYPSPDLTQ*PLRSTSPYQSTGPYRYPYLMQYPYP 605
           P+    P  S   +  P  +  PY  +GP  YP + QYP P
Sbjct: 143 PYAPHVPQYSAPPSASPYSTAPPY--SGPSLYPQVQQYPQP 181


>At3g45230.1 68416.m04881 hydroxyproline-rich glycoprotein family
           protein contains proline-rich extensin domains,
           INTERPRO:IPR002965; related to vegetative cell wall
           protein gp1 [Chlamydomonas reinhardtii]
           gi|12018147|gb|AAG45420
          Length = 175

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = +3

Query: 489 TAPTPYPSPDLTQ*PLRSTSPYQSTGPYRYP 581
           T  +P PSPDL   PL   SP    G +  P
Sbjct: 23  TKSSPAPSPDLADSPLIHASPPSKLGSHNSP 53


>At4g00890.1 68417.m00120 proline-rich family protein contains
           proline-rich extensin domains, INTERPRO:IPR002965
          Length = 431

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = +3

Query: 399 TSEYPFQLRT-LLPSTDLCHTQSELAYLTPWTAPTPYPSPDLTQ*PLRSTSP 551
           T E+  Q +  LLPS  +  T+     ++  ++P P PS  + +   RS SP
Sbjct: 194 TEEFESQPKPPLLPSKSIDETRLRSPLMSQASSPPPLPSKSIDENETRSQSP 245


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,941,656
Number of Sequences: 28952
Number of extensions: 201972
Number of successful extensions: 801
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 699
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 785
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1624036432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)