Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30059X
(479 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 155 1e-38
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 155 1e-38
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 155 1e-38
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 155 1e-38
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 154 3e-38
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 154 3e-38
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 150 5e-37
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 150 5e-37
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 139 1e-33
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 132 1e-31
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 120 4e-28
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 110 4e-25
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 85 2e-17
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 78 3e-15
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 64 6e-11
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 59 2e-09
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 48 2e-06
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 47 6e-06
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 40 9e-04
At5g43500.2 68418.m05318 expressed protein 30 0.70
At5g43500.1 68418.m05319 expressed protein 30 0.70
At3g24210.1 68416.m03038 ankyrin repeat family protein contains ... 27 5.0
At3g20270.2 68416.m02568 lipid-binding serum glycoprotein family... 27 6.5
At3g20270.1 68416.m02567 lipid-binding serum glycoprotein family... 27 6.5
At5g56690.1 68418.m07076 F-box family protein contains F-box dom... 27 8.7
At3g50690.1 68416.m05546 leucine-rich repeat family protein 27 8.7
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 155 bits (376), Expect = 1e-38
Identities = 69/80 (86%), Positives = 76/80 (95%)
Frame = -3
Query: 477 NTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQM 298
N V+SGG+TM+PGIADRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQM
Sbjct: 298 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQM 357
Query: 297 WISKEEYDESGPGIVHRKCF 238
WISK EYDESGP IVHRKCF
Sbjct: 358 WISKSEYDESGPSIVHRKCF 377
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 155 bits (376), Expect = 1e-38
Identities = 69/80 (86%), Positives = 76/80 (95%)
Frame = -3
Query: 477 NTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQM 298
N V+SGGTTM+PGIADRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQM
Sbjct: 298 NIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQM 357
Query: 297 WISKEEYDESGPGIVHRKCF 238
WI+K EYDESGP IVHRKCF
Sbjct: 358 WIAKAEYDESGPSIVHRKCF 377
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 155 bits (376), Expect = 1e-38
Identities = 69/80 (86%), Positives = 76/80 (95%)
Frame = -3
Query: 477 NTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQM 298
N V+SGGTTM+PGIADRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQM
Sbjct: 298 NIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQM 357
Query: 297 WISKEEYDESGPGIVHRKCF 238
WI+K EYDESGP IVHRKCF
Sbjct: 358 WIAKAEYDESGPSIVHRKCF 377
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 155 bits (376), Expect = 1e-38
Identities = 69/80 (86%), Positives = 76/80 (95%)
Frame = -3
Query: 477 NTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQM 298
N V+SGGTTM+PGIADRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQM
Sbjct: 298 NIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQM 357
Query: 297 WISKEEYDESGPGIVHRKCF 238
WI+K EYDESGP IVHRKCF
Sbjct: 358 WIAKAEYDESGPSIVHRKCF 377
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 154 bits (374), Expect = 3e-38
Identities = 69/80 (86%), Positives = 76/80 (95%)
Frame = -3
Query: 477 NTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQM 298
N V+SGGTTM+ GIADRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQM
Sbjct: 298 NIVLSGGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQM 357
Query: 297 WISKEEYDESGPGIVHRKCF 238
WISK EYDE+GPGIVHRKCF
Sbjct: 358 WISKAEYDEAGPGIVHRKCF 377
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 154 bits (374), Expect = 3e-38
Identities = 69/80 (86%), Positives = 76/80 (95%)
Frame = -3
Query: 477 NTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQM 298
N V+SGGTTM+ GIADRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQM
Sbjct: 298 NIVLSGGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQM 357
Query: 297 WISKEEYDESGPGIVHRKCF 238
WISK EYDE+GPGIVHRKCF
Sbjct: 358 WISKAEYDEAGPGIVHRKCF 377
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 150 bits (363), Expect = 5e-37
Identities = 67/80 (83%), Positives = 74/80 (92%)
Frame = -3
Query: 477 NTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQM 298
N V+SGGTTM+ GI DRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQM
Sbjct: 298 NIVLSGGTTMFGGIGDRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQM 357
Query: 297 WISKEEYDESGPGIVHRKCF 238
WI+K EYDESGP IVHRKCF
Sbjct: 358 WIAKAEYDESGPSIVHRKCF 377
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 150 bits (363), Expect = 5e-37
Identities = 67/80 (83%), Positives = 74/80 (92%)
Frame = -3
Query: 477 NTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQM 298
N V+SGGTTM+ GI DRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQM
Sbjct: 298 NIVLSGGTTMFGGIGDRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQM 357
Query: 297 WISKEEYDESGPGIVHRKCF 238
WI+K EYDESGP IVHRKCF
Sbjct: 358 WIAKAEYDESGPSIVHRKCF 377
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 139 bits (336), Expect = 1e-33
Identities = 61/80 (76%), Positives = 70/80 (87%)
Frame = -3
Query: 477 NTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQM 298
N V+SGGTTM+PGIADRM KEI ALAP ++KIK++APPERKYSVW+GGSILASLS+F M
Sbjct: 299 NIVLSGGTTMFPGIADRMNKEINALAPPSMKIKVVAPPERKYSVWVGGSILASLSSFAPM 358
Query: 297 WISKEEYDESGPGIVHRKCF 238
WI+K EYDE G IVHRKCF
Sbjct: 359 WITKAEYDEQGGAIVHRKCF 378
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 132 bits (319), Expect = 1e-31
Identities = 58/80 (72%), Positives = 70/80 (87%)
Frame = -3
Query: 477 NTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQM 298
N V+SGGTTM+ GI +RM KEI ALA + ++IKI+APPERKYSVWIGGSILASLST++QM
Sbjct: 250 NIVLSGGTTMFRGIEERMTKEINALAAANMRIKIVAPPERKYSVWIGGSILASLSTYEQM 309
Query: 297 WISKEEYDESGPGIVHRKCF 238
WI+K EY+E+GP IVH KCF
Sbjct: 310 WITKAEYEENGPAIVHTKCF 329
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 120 bits (290), Expect = 4e-28
Identities = 52/79 (65%), Positives = 65/79 (82%)
Frame = -3
Query: 477 NTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQM 298
N +M+GGTTM GI +RM KE+ AL PS++K+K++ PPE + SVWIGGSILASLSTF QM
Sbjct: 287 NILMTGGTTMLHGIKERMTKELNALVPSSMKVKVVVPPESECSVWIGGSILASLSTFHQM 346
Query: 297 WISKEEYDESGPGIVHRKC 241
WI+K+EY+E G IVHRKC
Sbjct: 347 WITKDEYEEHGAAIVHRKC 365
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 110 bits (265), Expect = 4e-25
Identities = 51/64 (79%), Positives = 59/64 (92%)
Frame = -3
Query: 477 NTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQM 298
N V+SGGTTM+ GIADRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQ+
Sbjct: 298 NIVLSGGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQV 357
Query: 297 WISK 286
I +
Sbjct: 358 KIDQ 361
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 85.4 bits (202), Expect = 2e-17
Identities = 36/80 (45%), Positives = 57/80 (71%), Gaps = 3/80 (3%)
Frame = -3
Query: 471 VMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAP---PERKYSVWIGGSILASLSTFQQ 301
+++GGT+ + +R++K++ +P + ++K++A ER++SVWIGGSILASL +FQQ
Sbjct: 361 LLAGGTSSMQQLKERLEKDLIEESPHSARVKVLASGNTTERRFSVWIGGSILASLGSFQQ 420
Query: 300 MWISKEEYDESGPGIVHRKC 241
MW SK EY+E G + RKC
Sbjct: 421 MWFSKSEYEEHGASYIQRKC 440
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 78.2 bits (184), Expect = 3e-15
Identities = 39/86 (45%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Frame = -3
Query: 477 NTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERK------YSVWIGGSILASL 316
NTV+ GGTT G R QKE L S I+ ++ PPE YS W+GG+ILA +
Sbjct: 279 NTVLCGGTTSMTGFESRFQKEAN-LCSSAIRPTLVKPPEYMPENLGMYSAWVGGAILAKV 337
Query: 315 STFQQMWISKEEYDESGPGIVHRKCF 238
Q ++K +YDE+GP +VHRKCF
Sbjct: 338 VFPQNQHVTKADYDETGPSVVHRKCF 363
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 63.7 bits (148), Expect = 6e-11
Identities = 27/78 (34%), Positives = 46/78 (58%)
Frame = -3
Query: 471 VMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 292
+++GG+T++P + +R++ E+ L P +KI + VW GGS+LAS F+ M +
Sbjct: 343 ILTGGSTLFPQLKERLEGELRPLVPDHFDVKITTQEDPILGVWRGGSLLASSPDFESMCV 402
Query: 291 SKEEYDESGPGIVHRKCF 238
+K EY+E G R+ F
Sbjct: 403 TKAEYEELGSARCRRRFF 420
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 58.8 bits (136), Expect = 2e-09
Identities = 31/81 (38%), Positives = 51/81 (62%), Gaps = 12/81 (14%)
Frame = -3
Query: 471 VMSGGTTMYPGIADRMQKEI------TALAPS-----TIKIKIIAPPERKYSVWIGGSIL 325
V+SGG+TMYPG+ R++KEI T L + ++++I PP RK+ V++GG++L
Sbjct: 299 VLSGGSTMYPGLPSRLEKEIQDRYLDTVLKGNKDGLKKLRLRIEDPPRRKHMVYLGGAVL 358
Query: 324 AS-LSTFQQMWISKEEYDESG 265
A + + WI++E+Y E G
Sbjct: 359 AGIMKDAPEFWINREDYMEEG 379
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 48.4 bits (110), Expect = 2e-06
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 16/90 (17%)
Frame = -3
Query: 477 NTVMSGGTTMYPGIADRMQKEITALAPSTI----------------KIKIIAPPERKYSV 346
N V+SGG+TM+ R+Q+++ + + + ++ +++ P ++++V
Sbjct: 327 NIVLSGGSTMFKDFGRRLQRDLKKIVDARVLANNARTGGEITSQPVEVNVVSHPVQRFAV 386
Query: 345 WIGGSILASLSTFQQMWISKEEYDESGPGI 256
W GGS+L+S F +KEEY+E G I
Sbjct: 387 WFGGSVLSSTPEFFASCRTKEEYEEYGASI 416
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 47.2 bits (107), Expect = 6e-06
Identities = 21/68 (30%), Positives = 44/68 (64%), Gaps = 3/68 (4%)
Frame = -3
Query: 471 VMSGGTTMYPGIADRMQKEITALAPSTIK--IKIIAPPERKYSVWIGGSILASLSTFQQM 298
V++GG+ PG+++R+++E+ PS+I I++I PP + W G ++++LS F
Sbjct: 396 VLTGGSACLPGLSERLERELQDHLPSSISNGIRVIPPPYGVDTSWHGAKLISNLSIFPGP 455
Query: 297 W-ISKEEY 277
W I+++++
Sbjct: 456 WCITRKQF 463
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 39.9 bits (89), Expect = 9e-04
Identities = 19/69 (27%), Positives = 34/69 (49%)
Frame = -3
Query: 471 VMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 292
+M+GG ++ PG+ +R++ I + P I ++ + W G S A+ F
Sbjct: 642 LMTGGCSLLPGMNERLECGIRMIRPCGSPINVVRAMDPVLDAWRGASAFAANLNFLGNAF 701
Query: 291 SKEEYDESG 265
+K +YDE G
Sbjct: 702 TKMDYDEKG 710
>At5g43500.2 68418.m05318 expressed protein
Length = 584
Score = 30.3 bits (65), Expect = 0.70
Identities = 16/70 (22%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Frame = -3
Query: 462 GGTTMYPGIADRMQKEITALAPSTIKIKII----APPERKYSVWIGGSILASLSTFQQMW 295
GG + G+ +++ + P T I + + E ++ W GG+IL L ++ W
Sbjct: 490 GGAGLTKGLVAAVEERVLHAIPPTEAIDTVQVLPSRTEPQFVTWKGGAILGILDFGREAW 549
Query: 294 ISKEEYDESG 265
I + ++ +G
Sbjct: 550 IERHQWMVNG 559
>At5g43500.1 68418.m05319 expressed protein
Length = 596
Score = 30.3 bits (65), Expect = 0.70
Identities = 16/70 (22%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Frame = -3
Query: 462 GGTTMYPGIADRMQKEITALAPSTIKIKII----APPERKYSVWIGGSILASLSTFQQMW 295
GG + G+ +++ + P T I + + E ++ W GG+IL L ++ W
Sbjct: 502 GGAGLTKGLVAAVEERVLHAIPPTEAIDTVQVLPSRTEPQFVTWKGGAILGILDFGREAW 561
Query: 294 ISKEEYDESG 265
I + ++ +G
Sbjct: 562 IERHQWMVNG 571
>At3g24210.1 68416.m03038 ankyrin repeat family protein contains
ankyrin repeats, Pfam domain PF00023
Length = 607
Score = 27.5 bits (58), Expect = 5.0
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -2
Query: 427 DAEGDHRPRALDHQDQDHRSPREEVLRMDRWIHPGFPV 314
D E +P+AL H S ++ LR W+ P FP+
Sbjct: 423 DNEHYRKPKALVSDKTRHESEYKKGLRPVLWLSPNFPL 460
>At3g20270.2 68416.m02568 lipid-binding serum glycoprotein family
protein similar to SP|P17213 Bactericidal
permeability-increasing protein precursor (BPI) {Homo
sapiens}; contains Pfam profile PF02886: LBP / BPI /
CETP family, C-terminal domain
Length = 515
Score = 27.1 bits (57), Expect = 6.5
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = -3
Query: 471 VMSGGTTMYPGIADRMQKEITALAPSTIKIKII 373
+ G + +Y G+ D QK I + T+ KI+
Sbjct: 209 INGGASWLYQGVVDAFQKMIISTVEKTVSTKIV 241
>At3g20270.1 68416.m02567 lipid-binding serum glycoprotein family
protein similar to SP|P17213 Bactericidal
permeability-increasing protein precursor (BPI) {Homo
sapiens}; contains Pfam profile PF02886: LBP / BPI /
CETP family, C-terminal domain
Length = 722
Score = 27.1 bits (57), Expect = 6.5
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = -3
Query: 471 VMSGGTTMYPGIADRMQKEITALAPSTIKIKII 373
+ G + +Y G+ D QK I + T+ KI+
Sbjct: 416 INGGASWLYQGVVDAFQKMIISTVEKTVSTKIV 448
>At5g56690.1 68418.m07076 F-box family protein contains F-box domain
Pfam:PF00646
Length = 402
Score = 26.6 bits (56), Expect = 8.7
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = -3
Query: 417 EITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDE 271
EI+ L P + +KI+A K V I S+L+ F MW+ K +YD+
Sbjct: 3 EISGL-PDDLLVKILAFLPTK--VAISTSVLSKQWRFLWMWLPKLKYDD 48
>At3g50690.1 68416.m05546 leucine-rich repeat family protein
Length = 447
Score = 26.6 bits (56), Expect = 8.7
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 433 RQDAEGDHRPRALDHQDQDHRSPREE 356
+ DAEG+ RP + D D++ EE
Sbjct: 153 KTDAEGNERPESDDEDDEEDEEDEEE 178
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,006,617
Number of Sequences: 28952
Number of extensions: 172385
Number of successful extensions: 510
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 498
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 506
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 819227264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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