Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30041X
(402 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 86 1e-17
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 86 1e-17
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 85 2e-17
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 83 5e-17
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 83 5e-17
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 83 5e-17
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 83 5e-17
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 83 5e-17
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 77 4e-15
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 71 2e-13
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 70 7e-13
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 64 4e-11
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 54 5e-08
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 44 4e-05
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 38 0.003
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 35 0.018
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 31 0.22
At2g35020.1 68415.m04296 UTP--glucose-1-phosphate uridylyltransf... 27 4.7
At1g31070.2 68414.m03804 UDP-N-acetylglucosamine pyrophosphoryla... 27 4.7
At1g31070.1 68414.m03803 UDP-N-acetylglucosamine pyrophosphoryla... 27 4.7
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 85.8 bits (203), Expect = 1e-17
Identities = 37/40 (92%), Positives = 39/40 (97%)
Frame = -1
Query: 402 KYSVWIGGSILASLSTFQQMWISKEEYNESGPGIVHRKCF 283
KYSVWIGGSILASLSTFQQMWISK EY+E+GPGIVHRKCF
Sbjct: 338 KYSVWIGGSILASLSTFQQMWISKAEYDEAGPGIVHRKCF 377
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 85.8 bits (203), Expect = 1e-17
Identities = 37/40 (92%), Positives = 39/40 (97%)
Frame = -1
Query: 402 KYSVWIGGSILASLSTFQQMWISKEEYNESGPGIVHRKCF 283
KYSVWIGGSILASLSTFQQMWISK EY+E+GPGIVHRKCF
Sbjct: 338 KYSVWIGGSILASLSTFQQMWISKAEYDEAGPGIVHRKCF 377
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 85.0 bits (201), Expect = 2e-17
Identities = 37/40 (92%), Positives = 38/40 (95%)
Frame = -1
Query: 402 KYSVWIGGSILASLSTFQQMWISKEEYNESGPGIVHRKCF 283
KYSVWIGGSILASLSTFQQMWISK EY+ESGP IVHRKCF
Sbjct: 338 KYSVWIGGSILASLSTFQQMWISKSEYDESGPSIVHRKCF 377
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 83.4 bits (197), Expect = 5e-17
Identities = 36/40 (90%), Positives = 38/40 (95%)
Frame = -1
Query: 402 KYSVWIGGSILASLSTFQQMWISKEEYNESGPGIVHRKCF 283
KYSVWIGGSILASLSTFQQMWI+K EY+ESGP IVHRKCF
Sbjct: 338 KYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 83.4 bits (197), Expect = 5e-17
Identities = 36/40 (90%), Positives = 38/40 (95%)
Frame = -1
Query: 402 KYSVWIGGSILASLSTFQQMWISKEEYNESGPGIVHRKCF 283
KYSVWIGGSILASLSTFQQMWI+K EY+ESGP IVHRKCF
Sbjct: 338 KYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 83.4 bits (197), Expect = 5e-17
Identities = 36/40 (90%), Positives = 38/40 (95%)
Frame = -1
Query: 402 KYSVWIGGSILASLSTFQQMWISKEEYNESGPGIVHRKCF 283
KYSVWIGGSILASLSTFQQMWI+K EY+ESGP IVHRKCF
Sbjct: 338 KYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 83.4 bits (197), Expect = 5e-17
Identities = 36/40 (90%), Positives = 38/40 (95%)
Frame = -1
Query: 402 KYSVWIGGSILASLSTFQQMWISKEEYNESGPGIVHRKCF 283
KYSVWIGGSILASLSTFQQMWI+K EY+ESGP IVHRKCF
Sbjct: 338 KYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 83.4 bits (197), Expect = 5e-17
Identities = 36/40 (90%), Positives = 38/40 (95%)
Frame = -1
Query: 402 KYSVWIGGSILASLSTFQQMWISKEEYNESGPGIVHRKCF 283
KYSVWIGGSILASLSTFQQMWI+K EY+ESGP IVHRKCF
Sbjct: 338 KYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 77.0 bits (181), Expect = 4e-15
Identities = 32/40 (80%), Positives = 36/40 (90%)
Frame = -1
Query: 402 KYSVWIGGSILASLSTFQQMWISKEEYNESGPGIVHRKCF 283
KYSVWIGGSILASLST++QMWI+K EY E+GP IVH KCF
Sbjct: 290 KYSVWIGGSILASLSTYEQMWITKAEYEENGPAIVHTKCF 329
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 71.3 bits (167), Expect = 2e-13
Identities = 30/40 (75%), Positives = 34/40 (85%)
Frame = -1
Query: 402 KYSVWIGGSILASLSTFQQMWISKEEYNESGPGIVHRKCF 283
KYSVW+GGSILASLS+F MWI+K EY+E G IVHRKCF
Sbjct: 339 KYSVWVGGSILASLSSFAPMWITKAEYDEQGGAIVHRKCF 378
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 69.7 bits (163), Expect = 7e-13
Identities = 30/37 (81%), Positives = 32/37 (86%)
Frame = -1
Query: 396 SVWIGGSILASLSTFQQMWISKEEYNESGPGIVHRKC 286
SVWIGGSILASLSTF QMWI+K+EY E G IVHRKC
Sbjct: 329 SVWIGGSILASLSTFHQMWITKDEYEEHGAAIVHRKC 365
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 63.7 bits (148), Expect = 4e-11
Identities = 26/39 (66%), Positives = 30/39 (76%)
Frame = -1
Query: 402 KYSVWIGGSILASLSTFQQMWISKEEYNESGPGIVHRKC 286
++SVWIGGSILASL +FQQMW SK EY E G + RKC
Sbjct: 402 RFSVWIGGSILASLGSFQQMWFSKSEYEEHGASYIQRKC 440
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 53.6 bits (123), Expect = 5e-08
Identities = 20/39 (51%), Positives = 29/39 (74%)
Frame = -1
Query: 399 YSVWIGGSILASLSTFQQMWISKEEYNESGPGIVHRKCF 283
YS W+GG+ILA + Q ++K +Y+E+GP +VHRKCF
Sbjct: 325 YSAWVGGAILAKVVFPQNQHVTKADYDETGPSVVHRKCF 363
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 44.0 bits (99), Expect = 4e-05
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = -1
Query: 402 KYSVWIGGSILASLSTFQQMWISK 331
KYSVWIGGSILASLSTFQQ+ I +
Sbjct: 338 KYSVWIGGSILASLSTFQQVKIDQ 361
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 37.9 bits (84), Expect = 0.003
Identities = 17/37 (45%), Positives = 22/37 (59%)
Frame = -1
Query: 393 VWIGGSILASLSTFQQMWISKEEYNESGPGIVHRKCF 283
VW GGS+LAS F+ M ++K EY E G R+ F
Sbjct: 384 VWRGGSLLASSPDFESMCVTKAEYEELGSARCRRRFF 420
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 35.1 bits (77), Expect = 0.018
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = -1
Query: 402 KYSVWIGGSILASLSTFQQMWISKEEYNESGPGI 301
+++VW GGS+L+S F +KEEY E G I
Sbjct: 383 RFAVWFGGSVLSSTPEFFASCRTKEEYEEYGASI 416
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 31.5 bits (68), Expect = 0.22
Identities = 12/32 (37%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = -1
Query: 402 KYSVWIGGSILASL-STFQQMWISKEEYNESG 310
K+ V++GG++LA + + WI++E+Y E G
Sbjct: 348 KHMVYLGGAVLAGIMKDAPEFWINREDYMEEG 379
>At2g35020.1 68415.m04296 UTP--glucose-1-phosphate
uridylyltransferase family protein similar to SP|Q16222
UDP-N-acetylhexosamine pyrophosphorylase (Antigen X)
{Homo sapiens}; contains Pfam profile PF01704:
UTP--glucose-1-phosphate uridylyltransferase
Length = 502
Score = 27.1 bits (57), Expect = 4.7
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1
Query: 346 LLEGGQGSQDGSTDPYG 396
LL GGQG++ GS+DP G
Sbjct: 129 LLSGGQGTRLGSSDPKG 145
>At1g31070.2 68414.m03804 UDP-N-acetylglucosamine
pyrophosphorylase-related low similarity to SP|P43123
UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23)
{Saccharomyces cerevisiae}
Length = 505
Score = 27.1 bits (57), Expect = 4.7
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1
Query: 346 LLEGGQGSQDGSTDPYG 396
LL GGQG++ GS+DP G
Sbjct: 133 LLSGGQGTRLGSSDPKG 149
>At1g31070.1 68414.m03803 UDP-N-acetylglucosamine
pyrophosphorylase-related low similarity to SP|P43123
UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23)
{Saccharomyces cerevisiae}
Length = 153
Score = 27.1 bits (57), Expect = 4.7
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1
Query: 346 LLEGGQGSQDGSTDPYG 396
LL GGQG++ GS+DP G
Sbjct: 133 LLSGGQGTRLGSSDPKG 149
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,953,434
Number of Sequences: 28952
Number of extensions: 138568
Number of successful extensions: 295
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 292
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 295
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 585758608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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