Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30039X
(421 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 105 2e-23
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 105 2e-23
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 104 3e-23
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 102 9e-23
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 102 9e-23
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 102 9e-23
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 102 9e-23
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 102 9e-23
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 89 1e-18
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 89 1e-18
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 83 7e-17
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 65 2e-11
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 62 2e-10
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 45 2e-05
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 37 0.005
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 35 0.019
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 31 0.42
At3g24210.1 68416.m03038 ankyrin repeat family protein contains ... 28 2.2
At1g31070.2 68414.m03804 UDP-N-acetylglucosamine pyrophosphoryla... 27 3.9
At3g17300.1 68416.m02211 expressed protein 27 5.2
At2g35020.1 68415.m04296 UTP--glucose-1-phosphate uridylyltransf... 27 5.2
At1g31070.1 68414.m03803 UDP-N-acetylglucosamine pyrophosphoryla... 27 5.2
At5g67150.1 68418.m08465 transferase family protein similar to a... 27 6.8
At1g59840.2 68414.m06740 expressed protein 27 6.8
At1g59840.1 68414.m06739 expressed protein 27 6.8
At5g24740.1 68418.m02920 expressed protein 26 9.0
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 105 bits (251), Expect = 2e-23
Identities = 48/57 (84%), Positives = 53/57 (92%)
Frame = -3
Query: 419 ALAPSSTKIKIIAPPDRKHSVRIGGSILASLSTFQQMWISKEESDESGPGIVHRKCF 249
ALAPSS KIK++APP+RK+SV IGGSILASLSTFQQMWISK E DE+GPGIVHRKCF
Sbjct: 321 ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDEAGPGIVHRKCF 377
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 105 bits (251), Expect = 2e-23
Identities = 48/57 (84%), Positives = 53/57 (92%)
Frame = -3
Query: 419 ALAPSSTKIKIIAPPDRKHSVRIGGSILASLSTFQQMWISKEESDESGPGIVHRKCF 249
ALAPSS KIK++APP+RK+SV IGGSILASLSTFQQMWISK E DE+GPGIVHRKCF
Sbjct: 321 ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDEAGPGIVHRKCF 377
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 104 bits (249), Expect = 3e-23
Identities = 48/57 (84%), Positives = 52/57 (91%)
Frame = -3
Query: 419 ALAPSSTKIKIIAPPDRKHSVRIGGSILASLSTFQQMWISKEESDESGPGIVHRKCF 249
ALAPSS KIK++APP+RK+SV IGGSILASLSTFQQMWISK E DESGP IVHRKCF
Sbjct: 321 ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKSEYDESGPSIVHRKCF 377
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 102 bits (245), Expect = 9e-23
Identities = 47/57 (82%), Positives = 52/57 (91%)
Frame = -3
Query: 419 ALAPSSTKIKIIAPPDRKHSVRIGGSILASLSTFQQMWISKEESDESGPGIVHRKCF 249
ALAPSS KIK++APP+RK+SV IGGSILASLSTFQQMWI+K E DESGP IVHRKCF
Sbjct: 321 ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 102 bits (245), Expect = 9e-23
Identities = 47/57 (82%), Positives = 52/57 (91%)
Frame = -3
Query: 419 ALAPSSTKIKIIAPPDRKHSVRIGGSILASLSTFQQMWISKEESDESGPGIVHRKCF 249
ALAPSS KIK++APP+RK+SV IGGSILASLSTFQQMWI+K E DESGP IVHRKCF
Sbjct: 321 ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 102 bits (245), Expect = 9e-23
Identities = 47/57 (82%), Positives = 52/57 (91%)
Frame = -3
Query: 419 ALAPSSTKIKIIAPPDRKHSVRIGGSILASLSTFQQMWISKEESDESGPGIVHRKCF 249
ALAPSS KIK++APP+RK+SV IGGSILASLSTFQQMWI+K E DESGP IVHRKCF
Sbjct: 321 ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 102 bits (245), Expect = 9e-23
Identities = 47/57 (82%), Positives = 52/57 (91%)
Frame = -3
Query: 419 ALAPSSTKIKIIAPPDRKHSVRIGGSILASLSTFQQMWISKEESDESGPGIVHRKCF 249
ALAPSS KIK++APP+RK+SV IGGSILASLSTFQQMWI+K E DESGP IVHRKCF
Sbjct: 321 ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 102 bits (245), Expect = 9e-23
Identities = 47/57 (82%), Positives = 52/57 (91%)
Frame = -3
Query: 419 ALAPSSTKIKIIAPPDRKHSVRIGGSILASLSTFQQMWISKEESDESGPGIVHRKCF 249
ALAPSS KIK++APP+RK+SV IGGSILASLSTFQQMWI+K E DESGP IVHRKCF
Sbjct: 321 ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 88.6 bits (210), Expect = 1e-18
Identities = 39/57 (68%), Positives = 50/57 (87%)
Frame = -3
Query: 419 ALAPSSTKIKIIAPPDRKHSVRIGGSILASLSTFQQMWISKEESDESGPGIVHRKCF 249
ALA ++ +IKI+APP+RK+SV IGGSILASLST++QMWI+K E +E+GP IVH KCF
Sbjct: 273 ALAAANMRIKIVAPPERKYSVWIGGSILASLSTYEQMWITKAEYEENGPAIVHTKCF 329
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 88.6 bits (210), Expect = 1e-18
Identities = 40/57 (70%), Positives = 47/57 (82%)
Frame = -3
Query: 419 ALAPSSTKIKIIAPPDRKHSVRIGGSILASLSTFQQMWISKEESDESGPGIVHRKCF 249
ALAP S KIK++APP+RK+SV +GGSILASLS+F MWI+K E DE G IVHRKCF
Sbjct: 322 ALAPPSMKIKVVAPPERKYSVWVGGSILASLSSFAPMWITKAEYDEQGGAIVHRKCF 378
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 83.0 bits (196), Expect = 7e-17
Identities = 37/56 (66%), Positives = 45/56 (80%)
Frame = -3
Query: 419 ALAPSSTKIKIIAPPDRKHSVRIGGSILASLSTFQQMWISKEESDESGPGIVHRKC 252
AL PSS K+K++ PP+ + SV IGGSILASLSTF QMWI+K+E +E G IVHRKC
Sbjct: 310 ALVPSSMKVKVVVPPESECSVWIGGSILASLSTFHQMWITKDEYEEHGAAIVHRKC 365
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 64.9 bits (151), Expect = 2e-11
Identities = 31/41 (75%), Positives = 37/41 (90%)
Frame = -3
Query: 419 ALAPSSTKIKIIAPPDRKHSVRIGGSILASLSTFQQMWISK 297
ALAPSS KIK++APP+RK+SV IGGSILASLSTFQQ+ I +
Sbjct: 321 ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQVKIDQ 361
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 61.7 bits (143), Expect = 2e-10
Identities = 29/57 (50%), Positives = 39/57 (68%), Gaps = 3/57 (5%)
Frame = -3
Query: 413 APSSTKIKIIAP---PDRKHSVRIGGSILASLSTFQQMWISKEESDESGPGIVHRKC 252
+P S ++K++A +R+ SV IGGSILASL +FQQMW SK E +E G + RKC
Sbjct: 384 SPHSARVKVLASGNTTERRFSVWIGGSILASLGSFQQMWFSKSEYEEHGASYIQRKC 440
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 44.8 bits (101), Expect = 2e-05
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 6/62 (9%)
Frame = -3
Query: 416 LAPSSTKIKIIAPPDRK------HSVRIGGSILASLSTFQQMWISKEESDESGPGIVHRK 255
L S+ + ++ PP+ +S +GG+ILA + Q ++K + DE+GP +VHRK
Sbjct: 302 LCSSAIRPTLVKPPEYMPENLGMYSAWVGGAILAKVVFPQNQHVTKADYDETGPSVVHRK 361
Query: 254 CF 249
CF
Sbjct: 362 CF 363
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 37.1 bits (82), Expect = 0.005
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = -3
Query: 398 KIKIIAPPDRKHSVRIGGSILAS-LSTFQQMWISKEESDESG 276
+++I PP RKH V +GG++LA + + WI++E+ E G
Sbjct: 338 RLRIEDPPRRKHMVYLGGAVLAGIMKDAPEFWINREDYMEEG 379
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 35.1 bits (77), Expect = 0.019
Identities = 20/56 (35%), Positives = 27/56 (48%)
Frame = -3
Query: 416 LAPSSTKIKIIAPPDRKHSVRIGGSILASLSTFQQMWISKEESDESGPGIVHRKCF 249
L P +KI D V GGS+LAS F+ M ++K E +E G R+ F
Sbjct: 365 LVPDHFDVKITTQEDPILGVWRGGSLLASSPDFESMCVTKAEYEELGSARCRRRFF 420
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 30.7 bits (66), Expect = 0.42
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = -3
Query: 398 KIKIIAPPDRKHSVRIGGSILASLSTFQQMWISKEESDESGPGI 267
++ +++ P ++ +V GGS+L+S F +KEE +E G I
Sbjct: 373 EVNVVSHPVQRFAVWFGGSVLSSTPEFFASCRTKEEYEEYGASI 416
>At3g24210.1 68416.m03038 ankyrin repeat family protein contains
ankyrin repeats, Pfam domain PF00023
Length = 607
Score = 28.3 bits (60), Expect = 2.2
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -2
Query: 420 RPRALVHQDQDHRSPR*EALRTDRWIHPGFPV 325
+P+ALV H S + LR W+ P FP+
Sbjct: 429 KPKALVSDKTRHESEYKKGLRPVLWLSPNFPL 460
>At1g31070.2 68414.m03804 UDP-N-acetylglucosamine
pyrophosphorylase-related low similarity to SP|P43123
UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23)
{Saccharomyces cerevisiae}
Length = 505
Score = 27.5 bits (58), Expect = 3.9
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +3
Query: 312 LLEGGQGSQDGSTDPYGVLPI 374
LL GGQG++ GS+DP G I
Sbjct: 133 LLSGGQGTRLGSSDPKGCFNI 153
>At3g17300.1 68416.m02211 expressed protein
Length = 91
Score = 27.1 bits (57), Expect = 5.2
Identities = 20/64 (31%), Positives = 29/64 (45%)
Frame = +3
Query: 147 QFSGITRYNVLTVAFRTRTSTTPHSTGVTRPRCLEALAVDDAGAGLVGFLLRDPHLLEGG 326
+F G ++N V R H T P ++ L DDA GL+ +L + L GG
Sbjct: 28 KFIGKQQHNTELVVGMVRQQFKKHMNE-TDPEKIQKLK-DDAARGLINHMLFESAKLTGG 85
Query: 327 QGSQ 338
+ SQ
Sbjct: 86 KVSQ 89
>At2g35020.1 68415.m04296 UTP--glucose-1-phosphate
uridylyltransferase family protein similar to SP|Q16222
UDP-N-acetylhexosamine pyrophosphorylase (Antigen X)
{Homo sapiens}; contains Pfam profile PF01704:
UTP--glucose-1-phosphate uridylyltransferase
Length = 502
Score = 27.1 bits (57), Expect = 5.2
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +3
Query: 312 LLEGGQGSQDGSTDPYG 362
LL GGQG++ GS+DP G
Sbjct: 129 LLSGGQGTRLGSSDPKG 145
>At1g31070.1 68414.m03803 UDP-N-acetylglucosamine
pyrophosphorylase-related low similarity to SP|P43123
UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23)
{Saccharomyces cerevisiae}
Length = 153
Score = 27.1 bits (57), Expect = 5.2
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +3
Query: 312 LLEGGQGSQDGSTDPYG 362
LL GGQG++ GS+DP G
Sbjct: 133 LLSGGQGTRLGSSDPKG 149
>At5g67150.1 68418.m08465 transferase family protein similar to
anthranilate N-hydroxycinnamoyl/benzoyltransferase,
Dianthus caryophyllus [gi:2239091]; contains Pfam
transferase family domain PF002458
Length = 448
Score = 26.6 bits (56), Expect = 6.8
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 304 IHICWKVDREARMDPPIRTECF 369
IH VD R++PP+ ECF
Sbjct: 291 IHCKLLVDMRGRLNPPLEKECF 312
>At1g59840.2 68414.m06740 expressed protein
Length = 297
Score = 26.6 bits (56), Expect = 6.8
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -3
Query: 410 PSSTKIKIIAPPDRKHSVRIGGSILASLSTFQQMWIS 300
P++T+ I+ P K IGG+ + ++ Q WIS
Sbjct: 236 PANTQAVILQPLGDKGIAVIGGNTIRGFTSSDQAWIS 272
>At1g59840.1 68414.m06739 expressed protein
Length = 297
Score = 26.6 bits (56), Expect = 6.8
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -3
Query: 410 PSSTKIKIIAPPDRKHSVRIGGSILASLSTFQQMWIS 300
P++T+ I+ P K IGG+ + ++ Q WIS
Sbjct: 236 PANTQAVILQPLGDKGIAVIGGNTIRGFTSSDQAWIS 272
>At5g24740.1 68418.m02920 expressed protein
Length = 3306
Score = 26.2 bits (55), Expect = 9.0
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +1
Query: 304 IHICWKVDREARMDPPIRTECFLSGGAMILI 396
I + W ++RE ++ I T+C SGG + +I
Sbjct: 3201 IDLVWNIEREIGLESVIHTDC--SGGVVRII 3229
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,177,771
Number of Sequences: 28952
Number of extensions: 147416
Number of successful extensions: 315
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 313
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 315
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 645327280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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