Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0127
         (700 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g55760.1 68418.m06950 transcriptional regulator Sir2 family p...    89   3e-18
At5g09230.5 68418.m01052 transcriptional regulator Sir2 family p...    45   4e-05
At5g09230.3 68418.m01049 transcriptional regulator Sir2 family p...    45   4e-05
At5g09230.2 68418.m01051 transcriptional regulator Sir2 family p...    45   4e-05
At5g09230.1 68418.m01050 transcriptional regulator Sir2 family p...    45   4e-05
At5g51420.1 68418.m06375 long-chain-alcohol O-fatty-acyltransfer...    31   0.73 
At5g17210.2 68418.m02017 expressed protein                             29   3.0  
At5g17210.1 68418.m02016 expressed protein                             29   3.0  
At1g80410.1 68414.m09413 acetyltransferase-related low similarit...    28   5.2  
At5g67020.1 68418.m08449 expressed protein                             27   9.0  
At4g12020.1 68417.m01912 protein kinase family protein similar t...    27   9.0  
At3g53290.1 68416.m05876 cytochrome P450, putative Similar to Cy...    27   9.0  
At2g06860.1 68415.m00768 Ulp1 protease family protein contains P...    27   9.0  
At1g71360.1 68414.m08237 expressed protein low similarity to PIR...    27   9.0  

>At5g55760.1 68418.m06950 transcriptional regulator Sir2 family
           protein contains Pfam domain PF02146: transcriptional
           regulator, Sir2 family
          Length = 473

 Score = 89.0 bits (211), Expect = 3e-18
 Identities = 45/84 (53%), Positives = 58/84 (69%), Gaps = 1/84 (1%)
 Frame = +2

Query: 260 LSPYENKGILGVPEKFDSNDKLNQKCVLLAQLVKDSKHIVVHTGAGISTSAGIPDFRGPN 439
           LS  E+ G +G+ E FD +  L  K   LA+L++ SKH+VV TGAGISTS GIPDFRGP 
Sbjct: 9   LSFIEDVGQVGMAEFFDPSHLLQCKIEELAKLIQKSKHLVVFTGAGISTSCGIPDFRGPK 68

Query: 440 GVWTLEKEGKK-PTINVSFADAQP 508
           G+WTL++EGK  P  ++ F  A P
Sbjct: 69  GIWTLQREGKDLPKASLPFHRAMP 92


>At5g09230.5 68418.m01052 transcriptional regulator Sir2 family
           protein contains Pfam domain PF02146: transcriptional
           regulator, Sir2 family;
          Length = 354

 Score = 45.2 bits (102), Expect = 4e-05
 Identities = 21/50 (42%), Positives = 30/50 (60%)
 Frame = +2

Query: 344 LAQLVKDSKHIVVHTGAGISTSAGIPDFRGPNGVWTLEKEGKKPTINVSF 493
           L +L + S  + + TGAG+ST  GIPD+R PNG ++    G KP  +  F
Sbjct: 66  LYRLFEQSSRLTILTGAGVSTECGIPDYRSPNGAYS---SGFKPITHQEF 112


>At5g09230.3 68418.m01049 transcriptional regulator Sir2 family
           protein contains Pfam domain PF02146: transcriptional
           regulator, Sir2 family;
          Length = 324

 Score = 45.2 bits (102), Expect = 4e-05
 Identities = 21/50 (42%), Positives = 30/50 (60%)
 Frame = +2

Query: 344 LAQLVKDSKHIVVHTGAGISTSAGIPDFRGPNGVWTLEKEGKKPTINVSF 493
           L +L + S  + + TGAG+ST  GIPD+R PNG ++    G KP  +  F
Sbjct: 85  LYRLFEQSSRLTILTGAGVSTECGIPDYRSPNGAYS---SGFKPITHQEF 131


>At5g09230.2 68418.m01051 transcriptional regulator Sir2 family
           protein contains Pfam domain PF02146: transcriptional
           regulator, Sir2 family;
          Length = 373

 Score = 45.2 bits (102), Expect = 4e-05
 Identities = 21/50 (42%), Positives = 30/50 (60%)
 Frame = +2

Query: 344 LAQLVKDSKHIVVHTGAGISTSAGIPDFRGPNGVWTLEKEGKKPTINVSF 493
           L +L + S  + + TGAG+ST  GIPD+R PNG ++    G KP  +  F
Sbjct: 85  LYRLFEQSSRLTILTGAGVSTECGIPDYRSPNGAYS---SGFKPITHQEF 131


>At5g09230.1 68418.m01050 transcriptional regulator Sir2 family
           protein contains Pfam domain PF02146: transcriptional
           regulator, Sir2 family;
          Length = 373

 Score = 45.2 bits (102), Expect = 4e-05
 Identities = 21/50 (42%), Positives = 30/50 (60%)
 Frame = +2

Query: 344 LAQLVKDSKHIVVHTGAGISTSAGIPDFRGPNGVWTLEKEGKKPTINVSF 493
           L +L + S  + + TGAG+ST  GIPD+R PNG ++    G KP  +  F
Sbjct: 85  LYRLFEQSSRLTILTGAGVSTECGIPDYRSPNGAYS---SGFKPITHQEF 131


>At5g51420.1 68418.m06375 long-chain-alcohol O-fatty-acyltransferase
           family protein / wax synthase family protein contains
           similarity to wax synthase  wax synthase - Simmondsia
           chinensis, PID:g5020219  similar to wax synthase
           [gi:5020219] from Simmondsia chinensis
          Length = 435

 Score = 31.1 bits (67), Expect = 0.73
 Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
 Frame = -3

Query: 362 LSQVEPRVHISGSVCHL--NQISLGLLVYLCFHKVIVLCIIARHFWETIYLMVLTQIFIE 189
           L +V   V IS S C+    +I  G+  +L    +  L  +   F+ +++L   T +FI 
Sbjct: 8   LIKVSVSVIISISYCYYVPTRIKPGIFRFLSVLPICALFRVLPLFFASVHLSGYTALFIS 67

Query: 188 PLFKFKLRIFFYN 150
            L  FKL +F +N
Sbjct: 68  WLANFKLILFSFN 80


>At5g17210.2 68418.m02017 expressed protein
          Length = 175

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = -3

Query: 368 YYLSQVEPRVHISGSVCHLNQISLGLLVYLC 276
           Y+   V+P V  +G+V  L  I+LG++ YLC
Sbjct: 99  YFCYIVKPGVFSTGAVLSLVTIALGIVYYLC 129


>At5g17210.1 68418.m02016 expressed protein
          Length = 209

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = -3

Query: 368 YYLSQVEPRVHISGSVCHLNQISLGLLVYLC 276
           Y+   V+P V  +G+V  L  I+LG++ YLC
Sbjct: 133 YFCYIVKPGVFSTGAVLSLVTIALGIVYYLC 163


>At1g80410.1 68414.m09413 acetyltransferase-related low similarity
           to acetyltransferase Tubedown-1 [Mus musculus]
           GI:8497318, N-TERMINAL ACETYLTRANSFERASE GB:P12945 from
           (Saccharomyces cerevisiae); contains Pfam profile
           PF00515 TPR Domain
          Length = 897

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
 Frame = +2

Query: 209 VPLDKLSPKNVLQ-LCKGLSPYENKGILGVPEKFDSNDKLNQKCVLLAQLVKDSKHIVVH 385
           +PLD L  +N  + + K + P   KG+  +     S     +K  +L QLV + KH +  
Sbjct: 304 IPLDFLQDENFKEAVAKYIKPLLTKGVPSLFSDLSSLYDHPRKPDILEQLVVEMKHSIGT 363

Query: 386 TGA 394
           TG+
Sbjct: 364 TGS 366


>At5g67020.1 68418.m08449 expressed protein
          Length = 394

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 15/38 (39%), Positives = 18/38 (47%)
 Frame = +2

Query: 392 AGISTSAGIPDFRGPNGVWTLEKEGKKPTINVSFADAQ 505
           AG+S  AG PD+R P     L      P   VSF  A+
Sbjct: 89  AGLSVGAGFPDWRSPGARLHLRAMIDLPVAAVSFQIAK 126


>At4g12020.1 68417.m01912 protein kinase family protein similar to
            mitogen-activated protein kinase [Arabidopsis thaliana]
            GI:1255448; contains Pfam profiles PF02671: Paired
            amphipathic helix repeat, PF03106: WRKY DNA-binding
            domain, PF00560: Leucine Rich Repeat, PF00069: Protein
            kinase domain, PF00931: NB-ARC domain
          Length = 1798

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -1

Query: 652  QYFPCKFQPKEFSWDTRLEMKVPSKC 575
            +Y+P    PK F+ +  +E+ +PS C
Sbjct: 1213 EYYPLSSLPKSFNPENLVELNLPSSC 1238


>At3g53290.1 68416.m05876 cytochrome P450, putative Similar to
           Cytochrome P450 71B31 (SP:Q9SCN2)[Arabidopsis thaliana];
           conatins Pfam profile: PF00067 cytochrome P450
          Length = 407

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = -2

Query: 642 HVSSSLKNFLGTPDLR*KSRPNVLTHNVFKFFYFNQLF*NHMGFWG 505
           ++SSS K  L T DL   +RP ++T  +F + + +  F  +   WG
Sbjct: 6   YLSSSAKEVLKTHDLETCTRPKMVTTGLFSYNFKDIGFTQYGEEWG 51


>At2g06860.1 68415.m00768 Ulp1 protease family protein contains Pfam
           profile PF02902: Ulp1 protease family, C-terminal
           catalytic domain
          Length = 938

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 15/48 (31%), Positives = 21/48 (43%)
 Frame = -1

Query: 469 FTFLL*SPHSIWPSKVWNTRRSTYASSSVDNNMFTIFHKLSQEYTFLV 326
           + FL  SP  +WP+    T   T    S DN   + +      YTF+V
Sbjct: 469 YWFLFFSPPDLWPNISSVTGAVTSPKLSGDNEEVSCYPYYQNHYTFIV 516


>At1g71360.1 68414.m08237 expressed protein low similarity to
           PIR|JC7185 chromosome 1 C1orf9 protein [Homo sapiens]
          Length = 459

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 1/104 (0%)
 Frame = +2

Query: 26  YVKRLTNFPLKIKSNIITVAHFFLKYKKLNTSIIRSSLLCPYYKKISLXXXXXMVQ*KSV 205
           ++   T   +K + N       +++Y KLN   + S     +Y  +SL     +   + +
Sbjct: 154 HLGNFTALNMKHEQNFTFADPKWVRYLKLN---LLSHYGSEFYCTLSLLEVYGVDAVERM 210

Query: 206 *VPLDKLSPKNVLQLCKGLSPYENKGILGVPEKFDSN-DKLNQK 334
              L  +  KN+L+L +G +  + K  +   E F+S+ DK  QK
Sbjct: 211 LEDLISIQDKNILKLQEGDTEQKEKKTMQAKESFESDEDKSKQK 254


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,716,504
Number of Sequences: 28952
Number of extensions: 338187
Number of successful extensions: 754
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 738
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 753
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1496852856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)