Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0066
(310 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g21900.1 68416.m02761 receptor-like protein kinase-related co... 30 0.28
At3g49200.1 68416.m05377 hypothetical protein 28 1.1
At3g49190.1 68416.m05376 condensation domain-containing protein ... 28 1.5
At1g27190.1 68414.m03312 leucine-rich repeat transmembrane prote... 27 1.9
At5g63870.3 68418.m08019 serine/threonine protein phosphatase (P... 27 3.4
At5g63870.2 68418.m08018 serine/threonine protein phosphatase (P... 27 3.4
At5g63870.1 68418.m08017 serine/threonine protein phosphatase (P... 27 3.4
At1g04900.1 68414.m00487 expressed protein contains Pfam PF02636... 27 3.4
At3g49210.1 68416.m05378 expressed protein 26 4.5
At5g63680.1 68418.m07994 pyruvate kinase, putative similar to py... 26 5.9
At1g08070.1 68414.m00883 pentatricopeptide (PPR) repeat-containi... 26 5.9
At5g63110.1 68418.m07923 histone deacetylase, putative similar t... 25 7.8
At3g28450.1 68416.m03554 leucine-rich repeat transmembrane prote... 25 7.8
At2g45830.2 68415.m05700 expressed protein 25 7.8
At2g45830.1 68415.m05699 expressed protein 25 7.8
At1g37130.1 68414.m04639 nitrate reductase 2 (NR2) identical to ... 25 7.8
>At3g21900.1 68416.m02761 receptor-like protein kinase-related
contains Pfam profile: PF01657 Domain of unknown
function that is usually associated with protein kinase
domain Pfam:PF00069
Length = 250
Score = 30.3 bits (65), Expect = 0.28
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +3
Query: 111 WCLWVSLLVEPFVASDAFDENDDWCLRNLKALLVD 215
W +L + PF FD+++D+C+ N K + VD
Sbjct: 118 WYDQCTLQISPFDTQGKFDKDNDFCMSNKKKMNVD 152
>At3g49200.1 68416.m05377 hypothetical protein
Length = 507
Score = 28.3 bits (60), Expect = 1.1
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = +3
Query: 117 LWVSLLVEPFVASDAFDENDDW--CLRNLKALLVDR 218
L +SL V+P V SD DDW LR++K ++ +R
Sbjct: 468 LTISLTVDPTVISDPHKLCDDWEESLRSIKVVVQER 503
>At3g49190.1 68416.m05376 condensation domain-containing protein
contains Pfam profile PF00668: Condensation domain
Length = 522
Score = 27.9 bits (59), Expect = 1.5
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = +3
Query: 123 VSLLVEPFVASDAFDENDDW--CLRNLKALLVDRK 221
++L+V+P V SD DDW LR++KA + R+
Sbjct: 458 ITLIVDPTVISDPHRLCDDWEESLRSIKAAVTKRE 492
>At1g27190.1 68414.m03312 leucine-rich repeat transmembrane protein
kinase, putative similar to CLV1 receptor kinase
GB:AAB58929 GI:2160756 from [Arabidopsis thaliana]
Length = 601
Score = 27.5 bits (58), Expect = 1.9
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 117 LWVSLLVEPFVASDAFDENDDWCLRNLKALLVD 215
LW+ L + F+ S + E+D CL+ LK L+D
Sbjct: 9 LWL-LFISSFLCSSSSAEDDVLCLQGLKNSLID 40
>At5g63870.3 68418.m08019 serine/threonine protein phosphatase (PP7)
identical to PP7 [Arabidopsis thaliana] GI:2791900
Length = 301
Score = 26.6 bits (56), Expect = 3.4
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = -2
Query: 273 PLRTTQSGQRRHTVILDPSDPLTVLLGSLN 184
P RTT+ + R V+L+P +P ++ LG+L+
Sbjct: 207 PKRTTRGKKNRRVVLLEP-EPSSMKLGTLD 235
>At5g63870.2 68418.m08018 serine/threonine protein phosphatase (PP7)
identical to PP7 [Arabidopsis thaliana] GI:2791900
Length = 413
Score = 26.6 bits (56), Expect = 3.4
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = -2
Query: 273 PLRTTQSGQRRHTVILDPSDPLTVLLGSLN 184
P RTT+ + R V+L+P +P ++ LG+L+
Sbjct: 207 PKRTTRGKKNRRVVLLEP-EPSSMKLGTLD 235
>At5g63870.1 68418.m08017 serine/threonine protein phosphatase (PP7)
identical to PP7 [Arabidopsis thaliana] GI:2791900
Length = 413
Score = 26.6 bits (56), Expect = 3.4
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = -2
Query: 273 PLRTTQSGQRRHTVILDPSDPLTVLLGSLN 184
P RTT+ + R V+L+P +P ++ LG+L+
Sbjct: 207 PKRTTRGKKNRRVVLLEP-EPSSMKLGTLD 235
>At1g04900.1 68414.m00487 expressed protein contains Pfam PF02636:
Uncharacterized ACR, COG1565
Length = 442
Score = 26.6 bits (56), Expect = 3.4
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +3
Query: 36 QEPCFAEPTAGLETRPTEKIWRETHWCLWVSLLVEPFVASDAFDE 170
Q+PC+ L+ P + ++ ++ W+ +LVE S+A E
Sbjct: 208 QQPCWVIMLEVLDNLPHDLVYSKSQLSPWMEVLVENKPESEALSE 252
>At3g49210.1 68416.m05378 expressed protein
Length = 518
Score = 26.2 bits (55), Expect = 4.5
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = +3
Query: 123 VSLLVEPFVASDAFDENDDW--CLRNLKALLVDR 218
+SL V+P V SD DDW L+++KA + +R
Sbjct: 479 ISLTVDPTVISDPHRLLDDWEKSLQSIKAAVQER 512
>At5g63680.1 68418.m07994 pyruvate kinase, putative similar to
pyruvate kinase, cytosolic isozyme [Glycine max]
SWISS-PROT:Q42806
Length = 510
Score = 25.8 bits (54), Expect = 5.9
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 223 IQNDGVAPLTTLCCTQGGATCSLT 294
+ NDG P T + CT G A+ S+T
Sbjct: 13 LPNDGRTPKTKIVCTLGPASRSVT 36
>At1g08070.1 68414.m00883 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 741
Score = 25.8 bits (54), Expect = 5.9
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +1
Query: 31 PIKSRASQNLPPDWKRDPLRRFGEKLIGVCGLV 129
P S Q + +WK LR EKL GL+
Sbjct: 652 PDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLI 684
>At5g63110.1 68418.m07923 histone deacetylase, putative similar to
SP|O22446 Histone deacetylase (HD) {Arabidopsis
thaliana}; contains Pfam profile PF00850: Histone
deacetylase family
Length = 471
Score = 25.4 bits (53), Expect = 7.8
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +3
Query: 24 HEPYQEPCFAEPTAGLETRPTEKIWRET 107
H P EP +ETRP +IW T
Sbjct: 395 HTPPVNRVLDEPEDDMETRPKPRIWSGT 422
>At3g28450.1 68416.m03554 leucine-rich repeat transmembrane protein
kinase, putative similar to receptor kinase GB:AAD02501
from [Arabidopsis thaliana]
Length = 605
Score = 25.4 bits (53), Expect = 7.8
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +3
Query: 159 AFDENDDWCLRNLKALLVD 215
A DE+D CLR LKA L D
Sbjct: 28 AADEDDIRCLRGLKASLTD 46
>At2g45830.2 68415.m05700 expressed protein
Length = 382
Score = 25.4 bits (53), Expect = 7.8
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +2
Query: 197 KSTVSGSEGSKMTVWRR*PLCVVRRGAPLVHSPTK 301
KS V+ EG+KMT W+ RG P V +PT+
Sbjct: 114 KSLVAIEEGNKMTQWKDRVAYAYWRGNPNV-APTR 147
>At2g45830.1 68415.m05699 expressed protein
Length = 523
Score = 25.4 bits (53), Expect = 7.8
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +2
Query: 197 KSTVSGSEGSKMTVWRR*PLCVVRRGAPLVHSPTK 301
KS V+ EG+KMT W+ RG P V +PT+
Sbjct: 255 KSLVAIEEGNKMTQWKDRVAYAYWRGNPNV-APTR 288
>At1g37130.1 68414.m04639 nitrate reductase 2 (NR2) identical to
SP|P11035 Nitrate reductase 2 (formerly EC 1.6.6.1)
(NR2) {Arabidopsis thaliana}
Length = 917
Score = 25.4 bits (53), Expect = 7.8
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +2
Query: 188 KEPKSTVSGSEGSKMTVWRR*PLCVVRR 271
K+ K GS G +VWR PLC V R
Sbjct: 203 KKSKGFNWGSAGVSTSVWRGVPLCDVLR 230
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,672,251
Number of Sequences: 28952
Number of extensions: 118231
Number of successful extensions: 346
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 343
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 346
length of database: 12,070,560
effective HSP length: 70
effective length of database: 10,043,920
effective search space used: 321405440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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